View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7325_high_9 (Length: 524)
Name: NF7325_high_9
Description: NF7325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7325_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 465; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 2091654 - 2091151
Alignment:
| Q |
4 |
agtttaactttctcatgagatacattgttgaaaagcttgctgaggagctccctgatgccaatatcatcttttgcgacgtgtatgaaggttcaatggatat |
103 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
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| T |
2091654 |
agtttaactttctcatgagatacattgttgaaaagcttgctgaggagctccctgatgccaatatcatcttctgtgacgtgtatgaaggttcaatggatat |
2091555 |
T |
|
| Q |
104 |
tttaaagaatcatgatcaatatggtattagtatttctgtatttgtgnnnnnnnnnccagctctcattctattaggaaactgtagtagcttcattatcata |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2091554 |
tttaaagaatcatgatcaatatggtattagtatttctgtatttgtgtttttttt-ccagctctcattctattaggaaactgtagtagcttcattatcata |
2091456 |
T |
|
| Q |
204 |
tcttactctgctttgtgttccctgattaggctttaacgtcacgtccgaggcttgctgtggatccgggaagtacaagggttggttgatgtgcttatcgcct |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2091455 |
tcttactctgctttgtgttccctgattaggctttaacgtcacgtccgaggcttgctgtggatccgggaagtacaagggttggttgatgtgcttatcgcct |
2091356 |
T |
|
| Q |
304 |
gaaatggcgtgcagtaacgcatccaactatatctggtgggaccagttccatccaactgatacagtgaatggaattttggcagccaatatatggaatggtg |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2091355 |
gaaatggcgtgcagtaacgcatccaactatatctggtgggaccagttccatccaactgatacagtgaatggaattttggcagccaatatatggaatggtg |
2091256 |
T |
|
| Q |
404 |
agcacgctaaaatgtgctatcctatgcacttacaggacatggtaattcagaaggcaaactgatactgtttgatgttagtttaccacattttgttcagaat |
503 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2091255 |
agcacgctaaaatgtgctatcctatgcacttacaggacatggtaattcagaaggcaaactgatactgtttgatgttagtttaccacattttgttcagaat |
2091156 |
T |
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| Q |
504 |
tagtt |
508 |
Q |
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||||| |
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| T |
2091155 |
tagtt |
2091151 |
T |
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