View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7325_low_23 (Length: 359)
Name: NF7325_low_23
Description: NF7325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7325_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 32224083 - 32223730
Alignment:
| Q |
1 |
ttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaaggatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatct |
100 |
Q |
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| T |
32224083 |
ttgagtagtggatggatgattctgttttttgttctatttttagcaacaacaaggatttttgtgaaaacagtgaaacatttttatgacatttgtgcaatct |
32223984 |
T |
|
| Q |
101 |
gtattcaatcctctccctttacttttaccatcatgatannnnnnncatgacaagttcttagctgtaaatgggttatgggtaatgggtaagttaagttatt |
200 |
Q |
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| T |
32223983 |
gtattcaatcctctccctttacttttaccatcatgatatttttttcatgacaagttcttagctgtaaatgggttatgggtaatgggtaagttaagttatt |
32223884 |
T |
|
| Q |
201 |
agtctctcaactatag-------tacatacatacatatacttgtgaatatgaaccaaatgttatgaccggattcattggttgttttaattttgttttggc |
293 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223883 |
agtctctcaactatagtagtacatacatacatacatatacttgtgaatatgaaccaaatgttatgaccggattcattggttgttttaattttgttttggc |
32223784 |
T |
|
| Q |
294 |
tttttctttgaataatgataatgtagcttaattgctaggtatagttagtgatgt |
347 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223783 |
tttttctttgaataatgataatgtagcttaattgctaggtatagttagtgatgt |
32223730 |
T |
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