View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7325_low_25 (Length: 344)
Name: NF7325_low_25
Description: NF7325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7325_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 16 - 325
Target Start/End: Original strand, 45450763 - 45451072
Alignment:
| Q |
16 |
atatcaagataagttgtcatataaaatatcaagacaggtgagtatattattcatatatttacacacaatagctataattgactttcattttttaacatca |
115 |
Q |
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| T |
45450763 |
atatcaagataagttgtcatataaaatatcaagacaggtgagtatattattcatatatttacacacaatagctataattgactttcattttttaacatca |
45450862 |
T |
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| Q |
116 |
tcatcagagtgaagtgggatgagaagttgatttgataagcaaccttaaggtagcttattgataagcaaattaagtgttcaaatataagcgacatggtctc |
215 |
Q |
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| T |
45450863 |
tcatcagagtgaagtgggatgagaagttgatttgataagcaaccttaaggtagcttattgataagcaaattaagtgttcaaatataagcgacatggtctc |
45450962 |
T |
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| Q |
216 |
attgcaagaaaagttgaagaaatttgtgggacacagatgggtggtgtttgtgtgtgcaatgtgggatatgtcatttgcaggaacagcttacatgtttgga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45450963 |
attgcaagaaaagttgaagaaatttgtgggacacagatgggtggtgtttgtgtgtgcaatgtgggatatgtcatttgcaggaacagcttacatgtttgga |
45451062 |
T |
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| Q |
316 |
agcatatcac |
325 |
Q |
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|||||||||| |
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| T |
45451063 |
agcatatcac |
45451072 |
T |
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