View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7325_low_37 (Length: 249)

Name: NF7325_low_37
Description: NF7325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7325_low_37
NF7325_low_37
[»] chr3 (59 HSPs)
chr3 (5-242)||(11212445-11212682)
chr3 (1-242)||(4408542-4408782)
chr3 (11-242)||(1790230-1790460)
chr3 (1-242)||(9386931-9387172)
chr3 (5-225)||(29467554-29467775)
chr3 (5-224)||(17905896-17906114)
chr3 (5-218)||(16387238-16387451)
chr3 (5-222)||(7800411-7800629)
chr3 (19-240)||(9002150-9002372)
chr3 (5-218)||(6496694-6496907)
chr3 (5-218)||(9988239-9988452)
chr3 (19-218)||(14317417-14317616)
chr3 (13-218)||(12243918-12244123)
chr3 (13-218)||(6216410-6216616)
chr3 (13-218)||(5623756-5623961)
chr3 (19-222)||(1057851-1058055)
chr3 (19-208)||(16666804-16666994)
chr3 (13-218)||(19782695-19782901)
chr3 (13-218)||(20679556-20679761)
chr3 (13-218)||(13379025-13379230)
chr3 (13-218)||(13389619-13389824)
chr3 (13-218)||(24389877-24390082)
chr3 (13-218)||(39376357-39376562)
chr3 (19-220)||(15222437-15222639)
chr3 (13-218)||(37870734-37870940)
chr3 (13-218)||(37879252-37879458)
chr3 (13-218)||(14469893-14470098)
chr3 (66-223)||(13075257-13075415)
chr3 (13-177)||(13126004-13126168)
chr3 (13-218)||(5872056-5872262)
chr3 (19-208)||(29897956-29898145)
chr3 (19-208)||(29939916-29940105)
chr3 (19-208)||(29989070-29989259)
chr3 (13-218)||(23761568-23761773)
chr3 (13-173)||(4748036-4748196)
chr3 (13-173)||(24664187-24664347)
chr3 (13-173)||(41687966-41688126)
chr3 (14-173)||(12292550-12292709)
chr3 (13-218)||(5514945-5515151)
chr3 (13-177)||(510529-510694)
chr3 (13-177)||(5543380-5543545)
chr3 (13-173)||(16425517-16425678)
chr3 (13-177)||(11278756-11278921)
chr3 (13-177)||(28320597-28320762)
chr3 (6-146)||(10633176-10633320)
chr3 (13-177)||(8778975-8779141)
chr3 (13-173)||(38198969-38199130)
chr3 (30-208)||(17963984-17964165)
chr3 (19-216)||(17010408-17010609)
chr3 (19-216)||(17021214-17021415)
chr3 (106-220)||(5197394-5197508)
chr3 (120-218)||(17219787-17219886)
chr3 (120-218)||(12389798-12389898)
chr3 (21-201)||(15837532-15837717)
chr3 (132-218)||(17251232-17251320)
chr3 (30-201)||(13143421-13143598)
chr3 (162-222)||(15657098-15657157)
chr3 (149-217)||(12393913-12393983)
chr3 (170-218)||(12954448-12954496)
[»] chr2 (28 HSPs)
chr2 (1-242)||(26871356-26871597)
chr2 (5-242)||(24421318-24421555)
chr2 (5-220)||(21168274-21168489)
chr2 (5-242)||(21127312-21127550)
chr2 (15-223)||(28727651-28727859)
chr2 (13-218)||(43086927-43087132)
chr2 (13-218)||(24334127-24334333)
chr2 (13-218)||(9903951-9904156)
chr2 (13-218)||(34796595-34796800)
chr2 (13-218)||(39176474-39176679)
chr2 (13-218)||(29248449-29248655)
chr2 (13-218)||(40244838-40245043)
chr2 (13-218)||(4214124-4214330)
chr2 (13-218)||(9769141-9769346)
chr2 (13-173)||(10271259-10271419)
chr2 (13-218)||(11401551-11401757)
chr2 (19-208)||(22768005-22768194)
chr2 (19-217)||(22747910-22748109)
chr2 (13-160)||(22940035-22940184)
chr2 (13-177)||(43349671-43349836)
chr2 (13-173)||(35257277-35257438)
chr2 (13-173)||(35267902-35268063)
chr2 (13-173)||(27225711-27225872)
chr2 (30-201)||(24810512-24810689)
chr2 (120-220)||(18942102-18942203)
chr2 (103-216)||(19308850-19308966)
chr2 (120-207)||(24719586-24719676)
chr2 (149-208)||(28707603-28707663)
[»] chr5 (50 HSPs)
chr5 (5-242)||(23402384-23402621)
chr5 (1-242)||(17450882-17451122)
chr5 (1-242)||(34058402-34058643)
chr5 (5-225)||(1115450-1115672)
chr5 (5-223)||(20786518-20786736)
chr5 (5-242)||(20558221-20558459)
chr5 (5-223)||(34778369-34778588)
chr5 (5-242)||(19470374-19470608)
chr5 (5-181)||(24933864-24934041)
chr5 (13-218)||(5294716-5294922)
chr5 (13-218)||(39358977-39359183)
chr5 (13-218)||(27607595-27607801)
chr5 (13-218)||(6982288-6982493)
chr5 (13-218)||(14562227-14562432)
chr5 (13-218)||(23302760-23302965)
chr5 (13-218)||(39495060-39495265)
chr5 (14-218)||(22682600-22682804)
chr5 (19-222)||(21418543-21418748)
chr5 (13-218)||(40396843-40397049)
chr5 (13-218)||(31839902-31840107)
chr5 (13-218)||(22152998-22153203)
chr5 (13-218)||(15997471-15997676)
chr5 (19-218)||(13527488-13527689)
chr5 (13-173)||(14036525-14036685)
chr5 (13-173)||(27466645-27466805)
chr5 (13-177)||(14451226-14451391)
chr5 (13-173)||(24821094-24821254)
chr5 (13-218)||(36586690-36586896)
chr5 (13-177)||(9342437-9342602)
chr5 (13-177)||(23368418-23368583)
chr5 (13-177)||(23703262-23703427)
chr5 (13-173)||(24814395-24814556)
chr5 (13-173)||(27046454-27046615)
chr5 (13-177)||(30231640-30231805)
chr5 (13-177)||(42049262-42049427)
chr5 (13-173)||(24573555-24573715)
chr5 (13-173)||(24592280-24592440)
chr5 (19-223)||(21672337-21672545)
chr5 (13-173)||(17613544-17613705)
chr5 (13-177)||(15746451-15746616)
chr5 (13-177)||(17725400-17725565)
chr5 (13-177)||(35221984-35222149)
chr5 (13-177)||(31355016-31355181)
chr5 (13-177)||(36694180-36694345)
chr5 (13-177)||(37734181-37734346)
chr5 (19-201)||(23482388-23482578)
chr5 (19-220)||(21613040-21613242)
chr5 (120-218)||(23433770-23433869)
chr5 (120-218)||(23445135-23445236)
chr5 (179-242)||(24932375-24932439)
[»] chr6 (40 HSPs)
chr6 (5-242)||(25798056-25798292)
chr6 (5-242)||(18921796-18922031)
chr6 (5-218)||(27497930-27498143)
chr6 (5-242)||(20036264-20036502)
chr6 (5-242)||(12369900-12370140)
chr6 (5-218)||(27377018-27377232)
chr6 (5-218)||(27467375-27467589)
chr6 (5-218)||(26037840-26038053)
chr6 (19-223)||(25731231-25731434)
chr6 (19-217)||(18830682-18830881)
chr6 (13-218)||(9118860-9119065)
chr6 (13-218)||(34813531-34813736)
chr6 (13-219)||(32968314-32968520)
chr6 (21-218)||(13917474-13917673)
chr6 (17-218)||(26869029-26869230)
chr6 (13-177)||(3665694-3665858)
chr6 (30-240)||(17783732-17783943)
chr6 (13-173)||(26029691-26029851)
chr6 (19-222)||(22290211-22290415)
chr6 (19-208)||(25682493-25682682)
chr6 (13-177)||(12723205-12723370)
chr6 (19-222)||(18547605-18547809)
chr6 (13-173)||(16953278-16953439)
chr6 (13-173)||(27346014-27346175)
chr6 (13-173)||(27406754-27406915)
chr6 (13-177)||(25791982-25792146)
chr6 (13-218)||(12859150-12859364)
chr6 (19-216)||(21123715-21123915)
chr6 (13-177)||(4635193-4635358)
chr6 (13-177)||(32307415-32307580)
chr6 (14-201)||(14065862-14066056)
chr6 (19-216)||(22380263-22380463)
chr6 (19-165)||(19457769-19457915)
chr6 (96-207)||(7665537-7665649)
chr6 (19-165)||(1655062-1655209)
chr6 (30-216)||(17051676-17051866)
chr6 (120-216)||(11239823-11239920)
chr6 (19-73)||(11239925-11239979)
chr6 (97-216)||(16880403-16880523)
chr6 (171-220)||(22809510-22809559)
[»] chr4 (31 HSPs)
chr4 (5-242)||(16309377-16309613)
chr4 (1-242)||(3377195-3377436)
chr4 (5-218)||(40463098-40463311)
chr4 (1-223)||(15203163-15203386)
chr4 (5-227)||(14842438-14842660)
chr4 (5-218)||(27821286-27821499)
chr4 (5-218)||(4994151-4994364)
chr4 (5-218)||(4997974-4998187)
chr4 (5-218)||(18758846-18759059)
chr4 (13-218)||(17922385-17922591)
chr4 (19-218)||(11540307-11540507)
chr4 (13-218)||(19950757-19950963)
chr4 (27-222)||(39516594-39516791)
chr4 (13-218)||(55751615-55751820)
chr4 (13-166)||(27192236-27192389)
chr4 (13-218)||(24023831-24024037)
chr4 (13-218)||(16260152-16260357)
chr4 (13-177)||(22000746-22000910)
chr4 (19-208)||(10294970-10295160)
chr4 (13-218)||(454850-455055)
chr4 (13-218)||(30932852-30933056)
chr4 (13-173)||(10746962-10747122)
chr4 (13-173)||(10960731-10960891)
chr4 (13-177)||(14846306-14846469)
chr4 (13-173)||(36022622-36022782)
chr4 (13-173)||(49511866-49512027)
chr4 (113-242)||(19575278-19575406)
chr4 (13-177)||(27660939-27661104)
chr4 (13-173)||(24644662-24644823)
chr4 (107-177)||(15010413-15010484)
chr4 (190-222)||(11519400-11519432)
[»] scaffold0993 (1 HSPs)
scaffold0993 (1-240)||(1818-2057)
[»] chr7 (28 HSPs)
chr7 (1-240)||(25207478-25207717)
chr7 (5-242)||(9163793-9164033)
chr7 (5-223)||(20983507-20983726)
chr7 (5-225)||(15884256-15884477)
chr7 (13-218)||(9437519-9437725)
chr7 (13-218)||(6873672-6873878)
chr7 (19-217)||(18432784-18432982)
chr7 (13-177)||(2712055-2712219)
chr7 (13-218)||(17956556-17956761)
chr7 (13-218)||(26396537-26396742)
chr7 (13-218)||(463416-463621)
chr7 (13-218)||(4216263-4216468)
chr7 (13-218)||(22093397-22093602)
chr7 (13-218)||(8621617-8621824)
chr7 (13-177)||(24738396-24738560)
chr7 (13-177)||(26692185-26692350)
chr7 (13-218)||(171143-171350)
chr7 (13-173)||(9089533-9089694)
chr7 (13-177)||(40048547-40048713)
chr7 (13-177)||(11009480-11009645)
chr7 (13-177)||(1991851-1992016)
chr7 (13-177)||(42870128-42870293)
chr7 (13-173)||(8008509-8008670)
chr7 (90-216)||(4421348-4421476)
chr7 (30-158)||(13180567-13180697)
chr7 (120-218)||(21695068-21695168)
chr7 (104-220)||(14137906-14138021)
chr7 (120-218)||(13660851-13660951)
[»] chr8 (29 HSPs)
chr8 (5-242)||(19422575-19422813)
chr8 (5-242)||(23465699-23465938)
chr8 (5-225)||(30321089-30321310)
chr8 (5-242)||(19229028-19229267)
chr8 (16-242)||(25680384-25680611)
chr8 (19-217)||(3837127-3837325)
chr8 (13-218)||(19132954-19133160)
chr8 (13-218)||(26115546-26115751)
chr8 (13-218)||(6155340-6155545)
chr8 (13-218)||(44485388-44485593)
chr8 (13-177)||(15787060-15787225)
chr8 (19-218)||(23787690-23787892)
chr8 (19-218)||(22152686-22152887)
chr8 (13-173)||(36297242-36297402)
chr8 (13-173)||(9345416-9345576)
chr8 (13-173)||(3355030-3355190)
chr8 (13-177)||(29080705-29080870)
chr8 (13-177)||(32084090-32084255)
chr8 (13-177)||(13694964-13695129)
chr8 (13-177)||(246122-246287)
chr8 (13-177)||(809242-809407)
chr8 (13-177)||(36082225-36082390)
chr8 (30-216)||(21292581-21292769)
chr8 (18-220)||(22667336-22667537)
chr8 (19-215)||(19933400-19933596)
chr8 (19-220)||(24649176-24649376)
chr8 (5-44)||(16741118-16741157)
chr8 (120-218)||(17263636-17263737)
chr8 (120-217)||(20378182-20378281)
[»] chr1 (25 HSPs)
chr1 (5-225)||(150070-150291)
chr1 (5-225)||(7683356-7683576)
chr1 (13-218)||(19183133-19183338)
chr1 (13-218)||(4171517-4171723)
chr1 (13-218)||(5646108-5646315)
chr1 (13-218)||(7511488-7511693)
chr1 (14-218)||(51652280-51652484)
chr1 (13-218)||(12734744-12734949)
chr1 (13-177)||(7695877-7696041)
chr1 (13-218)||(12619556-12619763)
chr1 (13-218)||(21867878-21868084)
chr1 (13-177)||(36242836-36243001)
chr1 (13-177)||(35644443-35644607)
chr1 (13-173)||(3175850-3176011)
chr1 (13-177)||(5837459-5837624)
chr1 (13-177)||(38099340-38099505)
chr1 (13-177)||(47614337-47614502)
chr1 (19-220)||(20879406-20879607)
chr1 (19-216)||(19166057-19166258)
chr1 (13-173)||(35396901-35397062)
chr1 (103-208)||(21212168-21212275)
chr1 (107-216)||(21130797-21130908)
chr1 (120-217)||(20933522-20933620)
chr1 (120-217)||(22125711-22125810)
chr1 (106-220)||(22460559-22460674)
[»] scaffold1002 (1 HSPs)
scaffold1002 (5-223)||(33-251)
[»] scaffold0047 (3 HSPs)
scaffold0047 (5-227)||(39272-39493)
scaffold0047 (13-177)||(43141-43305)
scaffold0047 (120-218)||(2747-2848)
[»] scaffold0906 (1 HSPs)
scaffold0906 (5-218)||(282-495)
[»] scaffold0133 (2 HSPs)
scaffold0133 (5-242)||(38721-38959)
scaffold0133 (13-218)||(35389-35594)
[»] scaffold0194 (1 HSPs)
scaffold0194 (5-215)||(149-360)
[»] scaffold0411 (1 HSPs)
scaffold0411 (23-218)||(2802-2998)
[»] scaffold0398 (2 HSPs)
scaffold0398 (5-209)||(73-278)
scaffold0398 (5-209)||(8328-8533)
[»] scaffold0272 (1 HSPs)
scaffold0272 (40-242)||(18425-18627)
[»] scaffold0747 (1 HSPs)
scaffold0747 (5-223)||(6603-6822)
[»] scaffold0322 (1 HSPs)
scaffold0322 (5-200)||(5171-5371)
[»] scaffold0199 (1 HSPs)
scaffold0199 (5-207)||(31149-31352)
[»] scaffold0017 (2 HSPs)
scaffold0017 (23-240)||(179717-179936)
scaffold0017 (30-158)||(49648-49776)
[»] scaffold0497 (1 HSPs)
scaffold0497 (19-220)||(6034-6236)
[»] scaffold0014 (1 HSPs)
scaffold0014 (19-217)||(220565-220763)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-217)||(49328-49544)
[»] scaffold0073 (1 HSPs)
scaffold0073 (19-222)||(62782-62987)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-218)||(69226-69426)
[»] scaffold0195 (1 HSPs)
scaffold0195 (19-215)||(30302-30498)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-222)||(55112-55317)
[»] scaffold0738 (1 HSPs)
scaffold0738 (19-222)||(397-602)
[»] scaffold0544 (1 HSPs)
scaffold0544 (19-222)||(5772-5977)
[»] scaffold0752 (1 HSPs)
scaffold0752 (19-222)||(6210-6415)
[»] scaffold0410 (1 HSPs)
scaffold0410 (19-203)||(10835-11021)
[»] scaffold0012 (2 HSPs)
scaffold0012 (19-208)||(131946-132136)
scaffold0012 (21-158)||(575-712)
[»] scaffold0105 (1 HSPs)
scaffold0105 (13-177)||(43354-43519)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-223)||(73839-74046)
[»] scaffold1078 (1 HSPs)
scaffold1078 (30-216)||(169-357)
[»] scaffold0739 (1 HSPs)
scaffold0739 (21-220)||(6287-6489)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-158)||(109230-109370)
[»] scaffold0537 (1 HSPs)
scaffold0537 (86-240)||(1471-1626)
[»] scaffold0099 (2 HSPs)
scaffold0099 (7-165)||(8657-8825)
scaffold0099 (179-224)||(10345-10390)
[»] scaffold1362 (1 HSPs)
scaffold1362 (148-242)||(1-94)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-74)||(195413-195482)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-201)||(2456-2633)
[»] scaffold0670 (1 HSPs)
scaffold0670 (105-217)||(1-114)
[»] scaffold0015 (1 HSPs)
scaffold0015 (89-216)||(162063-162192)
[»] scaffold0211 (1 HSPs)
scaffold0211 (19-165)||(6293-6439)
[»] scaffold0297 (1 HSPs)
scaffold0297 (32-165)||(20966-21100)
[»] scaffold0379 (1 HSPs)
scaffold0379 (120-223)||(1836-1940)
[»] scaffold0450 (1 HSPs)
scaffold0450 (103-220)||(3174-3291)
[»] scaffold0207 (1 HSPs)
scaffold0207 (90-201)||(24723-24838)
[»] scaffold0004 (2 HSPs)
scaffold0004 (120-218)||(8301-8401)
scaffold0004 (120-218)||(2439-2539)
[»] scaffold0056 (1 HSPs)
scaffold0056 (106-215)||(30679-30791)
[»] scaffold0454 (1 HSPs)
scaffold0454 (97-173)||(5617-5693)
[»] scaffold0315 (1 HSPs)
scaffold0315 (120-218)||(487-586)
[»] scaffold0002 (1 HSPs)
scaffold0002 (30-201)||(161378-161555)
[»] scaffold1365 (1 HSPs)
scaffold1365 (120-215)||(1075-1173)
[»] scaffold0193 (1 HSPs)
scaffold0193 (132-218)||(7073-7161)
[»] scaffold0185 (1 HSPs)
scaffold0185 (30-165)||(13417-13552)
[»] scaffold0810 (1 HSPs)
scaffold0810 (120-218)||(372-471)
[»] scaffold0217 (1 HSPs)
scaffold0217 (132-220)||(10999-11090)
[»] scaffold0249 (1 HSPs)
scaffold0249 (103-207)||(11395-11501)
[»] scaffold0084 (1 HSPs)
scaffold0084 (120-220)||(42094-42198)
[»] scaffold0594 (1 HSPs)
scaffold0594 (120-218)||(3545-3643)
[»] scaffold0132 (2 HSPs)
scaffold0132 (30-165)||(20948-21084)
scaffold0132 (30-165)||(34149-34285)
[»] scaffold0269 (1 HSPs)
scaffold0269 (30-77)||(11396-11444)
[»] scaffold0176 (2 HSPs)
scaffold0176 (30-176)||(13420-13565)
scaffold0176 (184-220)||(13389-13425)
[»] scaffold0302 (1 HSPs)
scaffold0302 (120-218)||(13580-13683)
[»] scaffold0183 (1 HSPs)
scaffold0183 (184-218)||(2685-2719)
[»] scaffold2124 (1 HSPs)
scaffold2124 (120-179)||(536-597)
[»] scaffold0324 (1 HSPs)
scaffold0324 (162-218)||(11809-11868)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 11212445 - 11212682
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11212445 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 11212544  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11212545 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttaataaaaacactt-aaacaaacacacactactcacttca 11212643  T
Q  205 caacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||| |||||||||||||||||  ||||||||||||||    
T  11212644 caactcacactttcatttcatctcaaaccttctctgcta 11212682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 4408782 - 4408542
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4408782 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacttact 4408683  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  4408682 aacacgcgccctcaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacactactcac 4408584  T
Q  201 ttcacaacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  4408583 ttcacaactcacactttcatttcatcttaatcttctctgcta 4408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 1790230 - 1790460
Alignment:
Q  11 gttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcc 110  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1790230 gttagttttctgaaaagtttctgacgtggtctatctgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtactaacacgcgcc 1790329  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaactt 210  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||     
T  1790330 tccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacacaactcacttcacaactc 1790428  T
Q  211 acactttcatttcatcttaaccttctctgcta 242  Q
    ||||||||||||||||||||||||||||||||    
T  1790429 acactttcatttcatcttaaccttctctgcta 1790460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 9386931 - 9387172
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  9386931 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttgaacttact 9387030  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    | ||||||||||| |||| |||||||||||||||||||||||| | |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  9387031 atcacgcgccccctatttgtcattaatgctatgtttgtttgtcccctttgaattgcaaacgttttgataaaaacactt-aaacaaacacacactactcac 9387129  T
Q  201 ttcacaacttacactttcatttcatct-taaccttctctgcta 242  Q
    | ||||||| |||||||||||||||||  ||||||||||||||    
T  9387130 tacacaactcacactttcatttcatctcaaaccttctctgcta 9387172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 29467554 - 29467775
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29467554 ccaaaggttatttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcagtgatgttttatttgcttttaaacgtactaaca 29467653  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  29467654 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaacacacactactcacttc 29467753  T
Q  204 acaacttacactttcatttcat 225  Q
    |||||| ||||| |||||||||    
T  29467754 acaactcacactctcatttcat 29467775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 17905896 - 17906114
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17905896 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtactggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 17905995  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  17905996 cgcg-ccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttc 17906093  T
Q  204 acaacttacactttcatttca 224  Q
    |||||| ||||| ||||||||    
T  17906094 acaactcacactctcatttca 17906114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 16387238 - 16387451
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  16387238 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgcttttaaatgtactaaca 16387337  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    || ||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16387338 cgtgcccccaatttgtcattaatgctttgtttgtttgtctcttctgaattgcaaacgttttaataaaaacacttaaaactaacacacactactcacttca 16387437  T
Q  205 caacttacactttc 218  Q
    ||||  ||||||||    
T  16387438 caacaaacactttc 16387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 7800411 - 7800629
Alignment:
Q  5 ccaaaggttagtttt-ctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaac 103  Q
    ||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7800411 ccaaaggttagtttttctgaataggttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaac 7800510  T
Q  104 acgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcactt 202  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||    
T  7800511 acgcgcccccaatttgtcattaatactatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcactt 7800609  T
Q  203 cacaacttacactttcattt 222  Q
    ||||||| ||||| ||||||    
T  7800610 cacaactcacactctcattt 7800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 9002150 - 9002372
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||    
T  9002150 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgaattatatgcttttaaacgtactaacacgcgcccccaattt 9002249  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     ||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  9002250 gtcattaatgctttgtgtgtttgtcccttttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcacacttt 9002348  T
Q  218 catttcatct-taaccttctctgc 240  Q
     ||||| |||  ||||||||||||    
T  9002349 aatttcttctccaaccttctctgc 9002372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 6496694 - 6496907
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  6496694 ccaaaggttagttttctgaaaagtctctgacgcggtctatttgtattggagtataacaaaaagggcaatgatgttttatctgcatttaaacgtactaaca 6496793  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||  |||  |||||||||||||||||    
T  6496794 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttc 6496892  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  6496893 acaacaaacactttc 6496907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 9988239 - 9988452
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  9988239 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcatttaaacgtactaaca 9988338  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||  |||  |||||||||||||||||    
T  9988339 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacggtttaattaaaacac-taagtcaattcacacactactcacttc 9988437  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  9988438 acaacaaacactttc 9988452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 14317417 - 14317616
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  14317417 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtactaacacgcgccccctattt 14317516  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     ||||||||||| |||||||||||| | ||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||||| |||||||    
T  14317517 gtcattaatgctttgtttgtttgtcccctttgaattgcaaacgtttttactaaagacactt-aaataaacacacactactcacttcacaactcacacttt 14317615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 12243918 - 12244123
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  12243918 tagttttctgaaaagtctctgacgtggtctatctgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaatgtactaacacgcgcccc 12244017  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||  |    
T  12244018 caatttgtcattaatgctatgtttgtttgtcttttatgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttcacaacaaa 12244116  T
Q  212 cactttc 218  Q
    |||||||    
T  12244117 cactttc 12244123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 6216410 - 6216616
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  6216410 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgctttttaacatactaacacgcgcccc 6216509  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  6216510 caatttgtcattaatgctatgtttgtttgtctcttctgaattacaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 6216608  T
Q  211 acactttc 218  Q
    ||||||||    
T  6216609 acactttc 6216616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 5623756 - 5623961
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  5623756 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 5623855  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  5623856 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 5623954  T
Q  212 cactttc 218  Q
    |||||||    
T  5623955 cactttc 5623961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 1058055 - 1057851
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||| ||||||||||    
T  1058055 tctgaaaagtttctgacgtggtttatttgtattggagtataacaaaaagagcaatgatgatttatatgcttttaaacgtactaacacgcacccccaattt 1057956  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     ||||||||||| ||||||||||| | |||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  1057955 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcacactt 1057857  T
Q  217 tcattt 222  Q
    ||||||    
T  1057856 tcattt 1057851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 16666804 - 16666994
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16666804 tctgaaaagtttctgacttgttctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtactaacacgcgcccccaattt 16666903  T
Q  119 ttcattaatgctatgtttgtttgtc-tcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||| ||||||||||||  |||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||    
T  16666904 gtcattaatgctttgtttgtttgtcaccttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 16666994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 19782901 - 19782695
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    ||||||| |||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19782901 tagttttatgaagagtctctgacgtggtctatttgtattggagtataaccaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 19782802  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  19782801 caatttgtcattaatgctatgtttgtttgtctcttctgaattacaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 19782703  T
Q  211 acactttc 218  Q
    ||||||||    
T  19782702 acactttc 19782695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 20679556 - 20679761
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  20679556 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 20679655  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  20679656 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 20679754  T
Q  212 cactttc 218  Q
    |||||||    
T  20679755 cactttc 20679761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 13379025 - 13379230
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  13379025 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcacccc 13379124  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  13379125 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 13379223  T
Q  212 cactttc 218  Q
    |||||||    
T  13379224 cactttc 13379230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 13389619 - 13389824
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  13389619 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcacccc 13389718  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  13389719 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 13389817  T
Q  212 cactttc 218  Q
    |||||||    
T  13389818 cactttc 13389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24389877 - 24390082
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24389877 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24389976  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  24389977 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 24390075  T
Q  212 cactttc 218  Q
    |||||||    
T  24390076 cactttc 24390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 39376562 - 39376357
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  39376562 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 39376463  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  39376462 caatttgtcattaatgctatgtgtgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 39376364  T
Q  212 cactttc 218  Q
    |||||||    
T  39376363 cactttc 39376357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 15222437 - 15222639
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||| |||||||    
T  15222437 tctgaaaagtttctaacgtggtctatttgtattggagtataacaaaaagggtaatgatgatttatatgcttttaaacgtactaacacgcgcctccaattt 15222536  T
Q  119 ttcattaatgctatgtttgtttgtctc-ttttgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    |||||||||||| |||||||||||| | |||||||||| || |||||| ||||||||||| || || |||||| ||||||||||||||||||| ||||||    
T  15222537 ttcattaatgctttgtttgtttgtccctttttgaattgtaatcgttttcactaaaaacacatagaa-aaacacgcactactcacttcacaactcacactt 15222635  T
Q  217 tcat 220  Q
    ||||    
T  15222636 tcat 15222639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 37870940 - 37870734
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  37870940 tagttttctgaagagtctctgacatggtctatgtgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacatacgcccc 37870841  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  || |||||||||||||||||||      
T  37870840 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcatacactactcacttcacaacaa 37870742  T
Q  211 acactttc 218  Q
    ||||||||    
T  37870741 acactttc 37870734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 37879458 - 37879252
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  37879458 tagttttctgaagagtctctgacatggtctatgtgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacatacgcccc 37879359  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  || |||||||||||||||||||      
T  37879358 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcatacactactcacttcacaacaa 37879260  T
Q  211 acactttc 218  Q
    ||||||||    
T  37879259 acactttc 37879252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 14470098 - 14469893
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  14470098 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgttttttaacatacttacacgcgcccc 14469999  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  14469998 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 14469900  T
Q  212 cactttc 218  Q
    |||||||    
T  14469899 cactttc 14469893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 13075415 - 13075257
Alignment:
Q  66 agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg--tt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||    
T  13075415 agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttt 13075316  T
Q  164 ttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcatttc 223  Q
    ||  ||||||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  13075315 ttgataaaaacactt-aaacaaacacacactactcacttcacatctcacactttcatttc 13075257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 13126168 - 13126004
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  13126168 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgttttttaacatacttacacgcgcccc 13126069  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  13126068 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 13126004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 5872056 - 5872262
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  5872056 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 5872155  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  5872156 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacactactcacttcacaacaa 5872254  T
Q  211 acactttc 218  Q
    ||||||||    
T  5872255 acactttc 5872262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 29897956 - 29898145
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |    
T  29897956 tctgaaaagtctttgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgttttattttcttttaaacgtactaacacgcgcccccaa-ct 29898054  T
Q  119 ttcattaatgctatgtttgtttgtc-tcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||    
T  29898055 gtcattaatgctatgtttgtttgtcaccttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 29898145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 29939916 - 29940105
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |    
T  29939916 tctgaaaagtctttgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgttttattttcttttaaacgtactaacacgcgcccccaa-ct 29940014  T
Q  119 ttcattaatgctatgtttgtttgtc-tcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||    
T  29940015 gtcattaatgctatgtttgtttgtcaccttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 29940105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 29989070 - 29989259
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |    
T  29989070 tctgaaaagtctttgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgttttattttcttttaaacgtactaacacgcgcccccaa-ct 29989168  T
Q  119 ttcattaatgctatgtttgtttgtc-tcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||    
T  29989169 gtcattaatgctatgtttgtttgtcaccttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 29989259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 23761773 - 23761568
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||| |||||| ||||||||||    
T  23761773 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaccgggcaatgatgttttacttgcttttaaatatactatcacgcgcccc 23761674  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    ||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  23761673 caatttgccattaatgctatgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 23761575  T
Q  212 cactttc 218  Q
    |||||||    
T  23761574 cactttc 23761568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 4748196 - 4748036
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  4748196 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 4748097  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  4748096 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 4748036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 24664347 - 24664187
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24664347 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24664248  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  24664247 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 24664187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 41688126 - 41687966
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  41688126 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 41688027  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  41688026 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 41687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 12292550 - 12292709
Alignment:
Q  14 agttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgccccc 113  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  12292550 agttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgccccc 12292649  T
Q  114 aatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  12292650 aatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 12292709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 5515151 - 5514945
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  5515151 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 5515052  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||      
T  5515051 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaa 5514953  T
Q  211 acactttc 218  Q
    ||||||||    
T  5514952 acactttc 5514945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 510529 - 510694
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  510529 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 510628  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  510629 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 510694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 5543380 - 5543545
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  5543380 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 5543479  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  5543480 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 5543545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 16425517 - 16425678
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  16425517 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 16425616  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  16425617 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 16425678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 11278756 - 11278921
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||    
T  11278756 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 11278855  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  11278856 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 11278921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 28320597 - 28320762
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||||||    
T  28320597 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 28320696  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  28320697 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 28320762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 10633176 - 10633320
Alignment:
Q  6 caaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa----agggcaatgatgttttatttgcttttaaacatacta 101  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    ||||||||||||||||| ||||||||||| ||||||    
T  10633176 caaaggttagttttctaaaaagtctctgacgtggtctatttgtattggagtataacaaaaaaaaagggcaatgatgttttacttgcttttaaatatacta 10633275  T
Q  102 acacgcgcccccaatttttcattaatgctatgtttgtttgtctct 146  Q
     |||||||||||||||| |||||||| ||||||||||||||||||    
T  10633276 tcacgcgcccccaatttgtcattaattctatgtttgtttgtctct 10633320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 8779141 - 8778975
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgc-ttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||  || |||| |||||||||    
T  8779141 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgcttttttgacgtacttacacgcgcc 8779042  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  8779041 cccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 8778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 38199130 - 38198969
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  38199130 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 38199031  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  38199030 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 38198969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 17964165 - 17963984
Alignment:
Q  30 tctgacgtggtctattagtattggagtataac-aaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||  |||||||||||||||| |||||||||    
T  17964165 tctgacgtggtctatttgtattggagtataactaaaaagggcaatgatgttttatttgcttttaaatttactttcacgcgcccccaatttgtcattaatg 17964066  T
Q  129 ctatgtttgtttgtctctt--ttgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     | |||||||||||| | |   |||||| | | |||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  17964065 ttgtgtttgtttgtcccctacatgaatttctatcgttttatttaaaaacactt-aaacaaacacacactactcacttcacaac 17963984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 17010609 - 17010408
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgctttt-aaacatactaacacgcgcccccaat 116  Q
    |||||||||| | |||||||||||||| ||||| | |||| || ||||||||||| ||| ||||||  |||||| |||  |||| |||||||||||||||    
T  17010609 tctgaaaagtctatgacgtggtctatttgtattagtgtattactaaaagggcaataatgattttataagctttttaaatgtacttacacgcgcccccaat 17010510  T
Q  117 ttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttact-aaaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    || ||||||||| | ||||||||||| | ||| |||||||||||||||||||| | ||||||||  |  |||||||||| |||||||||||||| |||||    
T  17010509 ttgtcattaatgatgtgtttgtttgtccccttctgaattgcaaacgttttactcataaacactttgacaaaacacacacaactcacttcacaacctacac 17010410  T
Q  215 tt 216  Q
    ||    
T  17010409 tt 17010408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 17021415 - 17021214
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgctttt-aaacatactaacacgcgcccccaat 116  Q
    |||||||||| | |||||||||||||| ||||| | |||| || ||||||||||| ||| ||||||  |||||| |||  |||| |||||||||||||||    
T  17021415 tctgaaaagtctatgacgtggtctatttgtattagtgtattactaaaagggcaataatgattttataagctttttaaatgtacttacacgcgcccccaat 17021316  T
Q  117 ttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttact-aaaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    || ||||||||| | ||||||||||| | ||| |||||||||||||||||||| | ||||||||  |  |||||||||| |||||||||||||| |||||    
T  17021315 ttgtcattaatgatgtgtttgtttgtccccttctgaattgcaaacgttttactcataaacactttgacaaaacacacacaactcacttcacaacctacac 17021216  T
Q  215 tt 216  Q
    ||    
T  17021215 tt 17021214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 5197508 - 5197394
Alignment:
Q  106 gcgcccccaatttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||| | |||||||| | |||||||||||| | || |||||||||||||||||||| |||||||||| |  |||||||||||||||||||||    
T  5197508 gcgcccccaattgt-cattaatgttgtgtttgtttgtccccttctgaattgcaaacgttttactcaaaacacttagacaaaacacacactactcacttca 5197410  T
Q  205 caacttacactttcat 220  Q
    |||| ||||| |||||    
T  5197409 caacctacacgttcat 5197394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 17219787 - 17219886
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||||| |||||||||||| | || ||||||||||||||||| || |||||||||| |  || |||||||||||||||||||||| |||||||||    
T  17219787 tcattaatgctttgtttgtttgtccccttctgaattgcaaacgttttgctcaaaacacttagacaaatcacacactactcacttcacaacctacactttc 17219886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 12389798 - 12389898
Alignment:
Q  120 tcattaatgctatgtttgtttgtctc-ttttgaattgcaaacgttttactaaaaacactta-aaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| | ||||||||| || | |||||||||||||||||||||||||||||||||| | | || |||| ||||||||||||||||| ||||||||    
T  12389798 tcattaatgttgtgtttgtttttccccttttgaattgcaaacgttttactaaaaacacttagacaaaatcacatactactcacttcacaacctacacttt 12389897  T
Q  218 c 218  Q
    |    
T  12389898 c 12389898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 15837717 - 15837532
Alignment:
Q  21 tgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||| || ||||||||||| | || ||||||| |||||||  |||||||| ||| || ||||||  |||||||||| ||||  |||||||||||||||     
T  15837717 tgaaacgtctctgacgtggtttgtttgtattggtgtataacttaaaagggctatggtgattttataagcttttaaacgtactttcacgcgcccccaattg 15837618  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact-aaaaacacttaaaa---caaacacacactactcact 201  Q
    | |||||||| | |||||||||||| | | |||||||||||||||||||| |||||||||  |||   ||||||||||| |||||||    
T  15837617 t-cattaatgttgtgtttgtttgtcccctctgaattgcaaacgttttactcaaaaacactataaataccaaacacacacaactcact 15837532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 17251232 - 17251320
Alignment:
Q  132 tgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    |||||||||||| |||| |||||||||||||||||  || |||||||||| |  |||||||||| ||||||||||||||||||||||||    
T  17251232 tgtttgtttgtcgctttctgaattgcaaacgtttttgcttaaaacacttagagaaaacacacaccactcacttcacaacttacactttc 17251320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 13143598 - 13143421
Alignment:
Q  30 tctgacgtggtctattagtattggagtataaca-aaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    ||||||||| |||||| ||||||| |||||||  |||||||||||||||  |||||  |||||||||  || |  ||| |||||| ||||| ||||||||    
T  13143598 tctgacgtgctctatttgtattggtgtataacttaaaagggcaatgatgactttataagcttttaaatgtattttcacacgcccctaatttgtcattaat 13143499  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgttttacta-aaaacact---taaaacaaacacacactactcact 201  Q
    ||  |||||||||||||| | |||||||||| ||||||  |  ||||||||   |||| |||||||||||||||||||    
T  13143498 gcagtgtttgtttgtctcctctgaattgcaatcgtttttttttaaaacactatataaaccaaacacacactactcact 13143421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 15657098 - 15657157
Alignment:
Q  162 ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcattt 222  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||| ||||    
T  15657098 ttttactaaaaacacttaga-caatcacacactactcacttcacaactaacacttttattt 15657157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 12393913 - 12393983
Alignment:
Q  149 tgaattgcaaacgtttt-actaaaaacacttaaa-acaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||||||||||| |||||||||||||| | | ||||||||| | ||||||||||||| ||||||||    
T  12393913 tgaattgcaaacgtttttactaaaaacacttagacaaaaacacacatttctcacttcacaacctacacttt 12393983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 12954448 - 12954496
Alignment:
Q  170 aaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    |||||||||| |  ||||||||||||||||||||||||| |||||||||    
T  12954448 aaaacacttagacaaaacacacactactcacttcacaacctacactttc 12954496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26871597 - 26871356
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  26871597 ttaaccaaagggtagttctctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtact 26871498  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26871497 aacacgtgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacactt-aaacaaacacacactactcac 26871399  T
Q  201 ttcacaacttacactttcatttcatctt-aaccttctctgcta 242  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  26871398 ttcacaactcacactttcatttcatcttcaaccttctctgcta 26871356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 24421318 - 24421555
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24421318 ccaaaggttagttttctgaaaagtttctgacgtggtctatctgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtactaaca 24421417  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  24421418 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacactt-aaacaaacacacactactcacttca 24421516  T
Q  205 caacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||| |||||||||||||||||  ||||||||||||||    
T  24421517 caactcacactttcatttcatctcaaaccttctctgcta 24421555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 21168274 - 21168489
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21168274 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 21168373  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  21168374 cgcacccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttc 21168472  T
Q  204 acaacttacactttcat 220  Q
    |||||| ||||||||||    
T  21168473 acaactcacactttcat 21168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 21127312 - 21127550
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21127312 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattttcttttaaacgtactaaca 21127411  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||    
T  21127412 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgttttttataaaaacactt-caacaaacacacactactcacttc 21127510  T
Q  204 acaacttacactttcatttcatct-taaccttctctgcta 242  Q
    |||||| ||||||||||||||| |  ||||||||||||||    
T  21127511 acaactcacactttcatttcatttcaaaccttctctgcta 21127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 28727651 - 28727859
Alignment:
Q  15 gttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgccccca 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  28727651 gttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaaggacactgatgttttatttgcttttaaacatactaacacgcgccccca 28727750  T
Q  115 atttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttaca 213  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||| |||    
T  28727751 atttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttcacaactcaca 28727849  T
Q  214 ctttcatttc 223  Q
    ||||||||||    
T  28727850 ctttcatttc 28727859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 43087132 - 43086927
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43087132 tagttttctgaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 43087033  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||  |    
T  43087032 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttcacaacaaa 43086934  T
Q  212 cactttc 218  Q
    |||||||    
T  43086933 cactttc 43086927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24334127 - 24334333
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24334127 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 24334226  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  24334227 caatttgtcattaatgctttgtttgtttgtctcttctgaattgtaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 24334325  T
Q  211 acactttc 218  Q
    ||||||||    
T  24334326 acactttc 24334333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 9903951 - 9904156
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9903951 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 9904050  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
     ||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  9904051 taatttgtcattaatgctgtgtttgtttgtctcttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 9904149  T
Q  212 cactttc 218  Q
    |||||||    
T  9904150 cactttc 9904156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 34796595 - 34796800
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  34796595 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgctttttaacatactaacacgcgcccc 34796694  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  34796695 caatttgtcattaatgctatgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 34796793  T
Q  212 cactttc 218  Q
    |||||||    
T  34796794 cactttc 34796800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 39176474 - 39176679
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  39176474 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 39176573  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  39176574 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 39176672  T
Q  212 cactttc 218  Q
    |||||||    
T  39176673 cactttc 39176679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 29248655 - 29248449
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29248655 tagttttctgaagagtctctgacttggtctatttgtattgaagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcccccc 29248556  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  29248555 caatttgtcattaatgttatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 29248457  T
Q  211 acactttc 218  Q
    ||||||||    
T  29248456 acactttc 29248449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 40245043 - 40244838
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  40245043 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 40244944  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  40244943 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 40244845  T
Q  212 cactttc 218  Q
    |||||||    
T  40244844 cactttc 40244838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 4214330 - 4214124
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaa-gggcaatgatgttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||||    
T  4214330 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgccc 4214231  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  4214230 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaa 4214132  T
Q  211 acactttc 218  Q
    ||||||||    
T  4214131 acactttc 4214124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 9769141 - 9769346
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  9769141 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttattttttaacatacttacacgcgcccc 9769240  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  9769241 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 9769339  T
Q  212 cactttc 218  Q
    |||||||    
T  9769340 cactttc 9769346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 10271419 - 10271259
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  10271419 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 10271320  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  10271319 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 10271259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 11401551 - 11401757
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  11401551 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 11401650  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    | ||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  11401651 ctaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacactactcacttcacaacaa 11401749  T
Q  211 acactttc 218  Q
    ||||||||    
T  11401750 acactttc 11401757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 22768194 - 22768005
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| ||||||||||| |||| |||||||||||||| | ||||||||||||||| |||| ||||||||||| |||| ||||||||||||||  |    
T  22768194 tctgaaaagtctctgacgtggtgtatttgtattggagtataatagaaagggcaatgatgtcttatatgcttttaaacgtacttacacgcgcccccaa-ct 22768096  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||    
T  22768095 gtcattaatgctatgtttgtttgtccccttttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 22768005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 22747910 - 22748109
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataac-aaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||| ||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||      
T  22747910 tctgaaaaatttatgacgtggtctatttgtattggtgtataactaaaaagggcaatgatgttttatatgcttttaaacgtacttacacgcgcccccaa-c 22748008  T
Q  118 tttcattaatgctatgtttgtttgtct-cttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    | ||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||  |||||    
T  22748009 tgtcattaatgctatgtttgtttgtctccttatgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaaccaacact 22748107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 22940035 - 22940184
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa--agggcaatgatgttttatttgcttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||    
T  22940035 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcc 22940134  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaac 160  Q
    |||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  22940135 cccaatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaac 22940184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 43349836 - 43349671
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    ||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||  ||||  |||||||||    
T  43349836 tagttctctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaatgtactttcacgcgccc 43349737  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  43349736 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 43349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 35257438 - 35257277
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  35257438 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 35257339  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  35257338 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 35257277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 35268063 - 35267902
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  35268063 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 35267964  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  35267963 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 35267902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 27225872 - 27225711
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| |||||| |||    
T  27225872 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcaccc 27225773  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  27225772 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 27225711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 24810512 - 24810689
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaa-aaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||||||||||||| ||||||| |||||||   ||||||||||||||  |||||  |||||||||| ||||  |||||||||||||||| ||||||||    
T  24810512 tctgacgtggtctatttgtattggtgtataacttgaaagggcaatgatgactttataagcttttaaacgtactttcacgcgcccccaatttgtcattaat 24810611  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacact---taaaacaaacacacactactcact 201  Q
    |||||||||||||||||| | ||||||| || |||||| | | ||||||||   |||| ||||||||||| |||||||    
T  24810612 gctatgtttgtttgtctcctctgaattgtaatcgtttttcatcaaaacactatataaaccaaacacacacaactcact 24810689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 18942203 - 18942102
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||||| |||||||||||| | || |||||||||| | |||||||||||||||||| |  || |||||||||||||||||||||| |||||||||    
T  18942203 tcattaatgctgtgtttgtttgtccccttctgaattgcaatcattttactaaaaacacttagacaaatcacacactactcacttcacaacctacactttc 18942104  T
Q  219 at 220  Q
    ||    
T  18942103 at 18942102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 19308850 - 19308966
Alignment:
Q  103 cacgcgcccccaatttttcattaatgctatgtttgtttgtctcttt--tgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactca 199  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||  |||||||| |||| |||||||  ||||||||  |  ||||||||||||||||    
T  19308850 cacgcgctcccaatttgtcattaatgctatgtttgtttgtctcttttctgaattgctaacgtttttactttaaacactttgacaaaacacacactactca 19308949  T
Q  200 cttcacaacttacactt 216  Q
    ||||| ||| |||||||    
T  19308950 cttcaaaacctacactt 19308966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 24719676 - 24719586
Alignment:
Q  120 tcattaatgctatgtttgtttgtc-tcttttgaattgcaaacgtttt-actaaaaacacttaaaacaaa-cacacactactcacttcacaa 207  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||| |||||||| || || |  ||| |||||||||||||||||||||    
T  24719676 tcattaatgctgtgtttgtttgtcctcttctgaattgcaaacgtttttactaaaaatacgtagacaaaatcacacactactcacttcacaa 24719586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 28707603 - 28707663
Alignment:
Q  149 tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
    ||||||||||||||||| ||| ||||||||||    |||||||||||||||||||||||||    
T  28707603 tgaattgcaaacgtttttactcaaaacacttagccaaaacacacactactcacttcacaac 28707663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 23402384 - 23402621
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23402384 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 23402483  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  23402484 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacactt-aaacaaacacacactactcacttca 23402582  T
Q  205 caacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||| |||||||||||||||||  ||||||||||||||    
T  23402583 caactcacactttcatttcatctcaaaccttctctgcta 23402621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 17451122 - 17450882
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  17451122 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaaggacaatgatgttttatatgcttttaaacttact 17451023  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  17451022 aacacgcgccctcaatttgtcattaatgttatgtttgtttgtctcttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacactactcac 17450924  T
Q  201 ttcacaacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  17450923 ttcacaactcacactttcatttcatcttaatcttctctgcta 17450882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 34058402 - 34058643
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  34058402 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacttact 34058501  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  34058502 aacacgcgccctctatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacacaactcac 34058600  T
Q  201 ttcacaacttacactttcatttcat-cttaaccttctctgcta 242  Q
     |||||||| ||||||||||||| | || ||||||||||||||    
T  34058601 ctcacaactcacactttcatttcgtcctaaaccttctctgcta 34058643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 1115672 - 1115450
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1115672 ccaaaggttggttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 1115573  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa--aacaaacacacactactcactt 202  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  || ||||||||||||||| |||    
T  1115572 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaaacacacactactcgctt 1115473  T
Q  203 cacaacttacactttcatttcat 225  Q
    ||||||| ||||| |||||||||    
T  1115472 cacaactcacactctcatttcat 1115450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 20786518 - 20786736
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20786518 ccaagggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 20786617  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  20786618 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttc 20786716  T
Q  204 acaacttacactttcatttc 223  Q
    || ||| |||||||||||||    
T  20786717 actactcacactttcatttc 20786736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 20558221 - 20558459
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20558221 ccaaatgttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 20558320  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  20558321 cgcgccccaaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttc 20558419  T
Q  204 acaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    |||||| ||||| |||||||| |||  ||||||||||||||    
T  20558420 acaactcacactctcatttca-cttcaaaccttctctgcta 20558459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 34778369 - 34778588
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34778369 ccaaaagttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 34778468  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcactt 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||    
T  34778469 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcactt 34778567  T
Q  203 cacaacttacactttcatttc 223  Q
    ||||||  |||||||||||||    
T  34778568 cacaacaaacactttcatttc 34778588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 19470374 - 19470608
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||    
T  19470374 ccaaaggttagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttgaacatactagca 19470473  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||   |||||||||||||  ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  19470474 cgcgcccccaatttgtcattaatgcta---ttgtttgtctcttccgaattacaaacgttttgataaatacactt-aaacaaacacacactactcacttca 19470569  T
Q  205 caacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||| ||||||||||||| |||  ||||||||||||||    
T  19470570 caactcacactttcatttcgtctcaaaccttctctgcta 19470608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 24934041 - 24933864
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24934041 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtactggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 24933942  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaa 181  Q
    ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||    
T  24933941 cgcccccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacacttaaa 24933864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 5294922 - 5294716
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5294922 tagttttctgaagagtctctgatttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 5294823  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  5294822 caatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 5294724  T
Q  211 acactttc 218  Q
    ||||||||    
T  5294723 acactttc 5294716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 39358977 - 39359183
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39358977 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 39359076  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  39359077 caatttgtcattaatgctatgtttgtttgtctcttctgaattacaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 39359175  T
Q  211 acactttc 218  Q
    ||||||||    
T  39359176 acactttc 39359183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 27607801 - 27607595
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    ||||||||| || ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27607801 tagttttctaaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 27607702  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  27607701 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 27607603  T
Q  211 acactttc 218  Q
    ||||||||    
T  27607602 acactttc 27607595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 6982288 - 6982493
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  6982288 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 6982387  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  6982388 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 6982486  T
Q  212 cactttc 218  Q
    |||||||    
T  6982487 cactttc 6982493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 14562432 - 14562227
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  14562432 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 14562333  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  14562332 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 14562234  T
Q  212 cactttc 218  Q
    |||||||    
T  14562233 cactttc 14562227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 23302760 - 23302965
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  23302760 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 23302859  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  23302860 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 23302958  T
Q  212 cactttc 218  Q
    |||||||    
T  23302959 cactttc 23302965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 39495265 - 39495060
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  39495265 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 39495166  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  39495165 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 39495067  T
Q  212 cactttc 218  Q
    |||||||    
T  39495066 cactttc 39495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 22682600 - 22682804
Alignment:
Q  14 agttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgccccc 113  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  22682600 agttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgccccc 22682699  T
Q  114 aatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaacttac 212  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  ||    
T  22682700 aatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaac 22682798  T
Q  213 actttc 218  Q
    ||||||    
T  22682799 actttc 22682804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 21418748 - 21418543
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||    
T  21418748 tctgaaaaatctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgcttttaaatgtactaacacgcgcccccaattt 21418649  T
Q  119 ttcattaatgctatgtttgtttgtctc--ttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
     ||||||||||| ||||||||||||||  ||||||||||||| || ||||||| ||||||||| | |||||||||||||||||||||||||||| |||||    
T  21418648 gtcattaatgctttgtttgtttgtctcctttttgaattgcaatcgtttttacttaaaacactt-agacaaacacacactactcacttcacaactcacact 21418550  T
Q  216 ttcattt 222  Q
    |||||||    
T  21418549 ttcattt 21418543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 40396843 - 40397049
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  40396843 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttgacatactaacacgcgcccc 40396942  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  40396943 caatttgtcattaatgttatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 40397041  T
Q  211 acactttc 218  Q
    ||||||||    
T  40397042 acactttc 40397049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 31839902 - 31840107
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31839902 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 31840001  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  31840002 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 31840100  T
Q  212 cactttc 218  Q
    |||||||    
T  31840101 cactttc 31840107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22152998 - 22153203
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  22152998 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 22153097  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||| | |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  22153098 caatttgtcattaatgatgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 22153196  T
Q  212 cactttc 218  Q
    |||||||    
T  22153197 cactttc 22153203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 15997676 - 15997471
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15997676 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 15997577  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||| | |||||||||||| ||| |||||||||||||||||| |||| |||| |||  |||  |||||||| |||||||||||||  |    
T  15997576 caatttgtcattaatgttgtgtttgtttgtcccttctgaattgcaaacgttttaataaacacac-taagtcaattcacacacttctcacttcacaacaaa 15997478  T
Q  212 cactttc 218  Q
    |||||||    
T  15997477 cactttc 15997471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 13527689 - 13527488
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  | |||||||| |||| ||||||||||||||||    
T  13527689 tctgaaaattttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgattttataagtttttaaacgtacttacacgcgcccccaatt 13527590  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | |||||||||||||||||||| || | ||| |||||| ||||||||||||| |||||||||  |  ||||||||||||||||||||||||| |||||||    
T  13527589 tgtcattaatgctatgtttgttcgtccccttatgaatttcaaacgttttacttaaaacactttgacaaaacacacactactcacttcacaacctacactt 13527490  T
Q  217 tc 218  Q
    ||    
T  13527489 tc 13527488  T

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Target: chr5; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 14036525 - 14036685
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  14036525 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 14036624  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  14036625 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 14036685  T

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Target: chr5; HSP #25
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 27466645 - 27466805
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  27466645 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 27466744  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  27466745 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 27466805  T

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Target: chr5; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 14451391 - 14451226
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  14451391 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 14451292  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  14451291 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 14451226  T

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Target: chr5; HSP #27
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 24821254 - 24821094
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24821254 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24821155  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||| | |||||||||||| ||| |||||| ||||||||||| ||||||    
T  24821154 caatttgtcattaatgttgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 24821094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 36586896 - 36586690
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  36586896 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 36586797  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||      
T  36586796 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaa 36586698  T
Q  211 acactttc 218  Q
    ||||||||    
T  36586697 acactttc 36586690  T

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Target: chr5; HSP #29
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 9342437 - 9342602
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  9342437 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 9342536  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  9342537 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 9342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 23368418 - 23368583
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  23368418 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 23368517  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  23368518 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 23368583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 23703262 - 23703427
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  23703262 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 23703361  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  23703362 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 23703427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 24814395 - 24814556
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  24814395 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 24814494  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  24814495 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 24814556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 27046615 - 27046454
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  27046615 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 27046516  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  27046515 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 27046454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 30231805 - 30231640
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  30231805 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 30231706  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  30231705 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 30231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 42049262 - 42049427
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  42049262 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 42049361  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  42049362 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 42049427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 24573555 - 24573715
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24573555 tagttttctgaagagtctctaacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24573654  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| ||||||||||||  || |||||| ||||||||||| ||||||    
T  24573655 caatttgtcattaatgctgtgtttgtttgtccattctgaattacaaacgttttaataaaaa 24573715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 24592440 - 24592280
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24592440 tagttttctgaagagtctctaacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24592341  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| ||||||||||||  || |||||| ||||||||||| ||||||    
T  24592340 caatttgtcattaatgctgtgtttgtttgtccattctgaattacaaacgttttaataaaaa 24592280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 21672337 - 21672545
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||| |||| ||||||||||| || | |||||||||||||||||||||||||||||||  ||||| ||||||||||  ||||  |||||||||||||||    
T  21672337 tctgataagtctctgacgtggtgtacttgtattggagtataacaaaaagggcaatgatgactttatatgcttttaaatgtactttcacgcgcccccaatt 21672436  T
Q  118 tttcattaatgctatgtttgtttgt---ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttaca 213  Q
    | |||||||||||||||||||||||   || || |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||| |||    
T  21672437 tgtcattaatgctatgtttgtttgtccccttttctgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcaca 21672535  T
Q  214 ctttcatttc 223  Q
    ||||| ||||    
T  21672536 ctttcttttc 21672545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 17613544 - 17613705
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  17613544 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 17613643  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  17613644 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 17613705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 15746451 - 15746616
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||    
T  15746451 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 15746550  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| ||||||| |||| | | |||||| ||||||||||| ||||||||||    
T  15746551 ccaatttgtcattaatgctgtgtttgtctgtcccctctgaattacaaacgttttaataaaaacact 15746616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 17725400 - 17725565
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||  ||||||| ||||||||||    
T  17725400 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgtttttattcgctttttgacatacttacacgcgccc 17725499  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  17725500 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 17725565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 35221984 - 35222149
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  35221984 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 35222083  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  35222084 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 35222149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 31355016 - 31355181
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||  || |||| ||||||||||    
T  31355016 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 31355115  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  31355116 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 31355181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 36694180 - 36694345
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||  || |||| ||||||||||    
T  36694180 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 36694279  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  36694280 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 36694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 37734346 - 37734181
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || || | ||||||||||    
T  37734346 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtaattacacgcgccc 37734247  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  37734246 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 37734181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 23482578 - 23482388
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||| || |||||| |||||| ||||||| |||||||  ||||||||||||||| ||||||  |||||||||| ||||||||||||||| ||||    
T  23482578 tctgaaaagtctccgacgtgatctatttgtattggtgtataacttaaaagggcaatgatgattttataagcttttaaacgtactaacacgcgccctcaat 23482479  T
Q  117 ttttcattaatgctatgtttgtttgtctc--ttttgaattgcaaacg-ttttactaaaaacact---taaaacaaacacacactactcact 201  Q
    || |||||||| || |||||||||||| |  || |||||||| |||| ||||||| ||||||||   |||| ||||||||||  |||||||    
T  23482478 ttgtcattaatactgtgtttgtttgtcccctttctgaattgctaacgtttttactcaaaacactatataaaccaaacacacataactcact 23482388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 21613040 - 21613242
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||| | |||||||||||| |||| ||||||| |||| ||  || |||||||||||| ||| || ||||| |||  ||||| | |||||||||||||    
T  21613040 tctgaaacgcttctgacgtggtttatttgtattggtgtatgacttaagagggcaatgatgattttttagctttgaaag-tactatctcgcgcccccaatt 21613138  T
Q  118 tttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
     | |||||||| | |||||||||||| | || |||||||||| |||||| ||| |||||||||| |  ||||||||||||||||||| | ||| ||||||    
T  21613139 gt-cattaatgttgtgtttgtttgtccccttctgaattgcaatcgtttttactcaaaacacttagacaaaacacacactactcactttaaaacctacact 21613237  T
Q  216 ttcat 220  Q
    |||||    
T  21613238 ttcat 21613242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 23433770 - 23433869
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||| | |||||||||||| ||| ||||||||||||||||| ||| |||||||||| |  |||||||||||||||| |||||||| |||||||||    
T  23433770 tcattaatgttgtgtttgtttgtcccttctgaattgcaaacgtttttactcaaaacacttagacaaaacacacactactcaattcacaacctacactttc 23433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 23445135 - 23445236
Alignment:
Q  120 tcattaatgctatgtttgtttgtctctttt--gaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    ||||||||| | |||||||||||| |||||  |||||||||||||||| ||| |||||||||| |  |||||||||||||||| |||||||| |||||||    
T  23445135 tcattaatgttgtgtttgtttgtcccttttctgaattgcaaacgtttttactcaaaacacttagacaaaacacacactactcaattcacaacctacactt 23445234  T
Q  217 tc 218  Q
    ||    
T  23445235 tc 23445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 24932439 - 24932375
Alignment:
Q  179 aaaacaaacacacactactcacttcacaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| |||  ||||||||||||||    
T  24932439 aaaacaaacacacactactcacttcacaactcacactctcatttca-cttcaaaccttctctgcta 24932375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 25798292 - 25798056
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25798292 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttgaacttactaaca 25798193  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||    
T  25798192 cgcgccctcaatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttgataaaatcactt-aaacaaacacacactactcacttca 25798094  T
Q  205 caacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  25798093 caactcacactttcatttcatcttaaccttctctgcta 25798056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 18921796 - 18922031
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  18921796 ccaaaggttagttttctgaaaagtttctgacttggtctatttgtattagagtataacaaaaagggcaatgatgttttatatgcttttaaacttactaaca 18921895  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    ||||||| |||||| ||||||||| ||||||||||||||||  ||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||    
T  18921896 cgcgccctcaatttgtcattaatgttatgtttgtttgtctc-cttgaattgcaaacgttttgataaaaacactt-aaacaaacacacacaactcacttca 18921993  T
Q  205 caacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18921994 caactcacactttcatttcatcttaaccttctctgcta 18922031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 27498143 - 27497930
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  27498143 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatctgcaattaaacatactaaca 27498044  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  27498043 cgcgcccccaatttgtcattaatgctatgtttgtttgtctgttctgaattgcaaacgttttaacaaaaacacttaaaacaaacacacactactcacttca 27497944  T
Q  205 caacttacactttc 218  Q
    ||||  ||||||||    
T  27497943 caacaaacactttc 27497930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 20036264 - 20036502
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20036264 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtactggagtataacaaaaagggcaatgatgttttattttcttttaaacatactaaca 20036363  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    | |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||| ||||||||||||||||||    
T  20036364 cacgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacagacacacactactcacttc 20036462  T
Q  204 acaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    |||||| ||||| |||||||| |||  ||||||||||||||    
T  20036463 acaactcacactctcatttca-cttcaaaccttctctgcta 20036502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 12370140 - 12369900
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  12370140 ccaaaggatagttttctgaaaagtctctaacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgtttttaaacgtactaaca 12370041  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa--aacaaacacacactactcactt 202  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  || ||||||||||||||| |||    
T  12370040 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaaacacacactactcgctt 12369941  T
Q  203 cacaacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||||| ||||| ||||||||| |  ||||||||||||||    
T  12369940 cacaactcacactctcatttcatttcaaaccttctctgcta 12369900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 27377232 - 27377018
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||    
T  27377232 ccaaaggttagttttctgataagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgcttttaaatgtactatca 27377133  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact-aaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27377132 cgcgcccccaatttgtcattaatgttatgtttgtttgtctcttctgaattgcaaacgttttaataaaaaacacttaaaacaaacacacactactcacttc 27377033  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  27377032 acaacaaacactttc 27377018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 27467589 - 27467375
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||    
T  27467589 ccaaaggttagttttctgataagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgcttttaaatgtactatca 27467490  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact-aaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27467489 cgcgcccccaatttgtcattaatgttatgtttgtttgtctcttctgaattgcaaacgttttaataaaaaacacttaaaacaaacacacactactcacttc 27467390  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  27467389 acaacaaacactttc 27467375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 26038053 - 26037840
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||  |||||||||||||||    
T  26038053 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtatgacaaaaagggcaatgatgttttatctgcacttaaacatactaaca 26037954  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||  |||  |||||||||||||||||    
T  26037953 cgcgcccccaatttgtcattaatactatgtttgtttgtctcttttgaattgcaaacgatttaataaaaacac-taagtcaattcacacactactcacttc 26037855  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  26037854 acaacaaacactttc 26037840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 25731231 - 25731434
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||  |    
T  25731231 tctgaaaagtatctgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtacttacacgcgcccccaa-ct 25731329  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  25731330 gtcattaatgctatgtttgtttgtcccttttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcacacttt 25731428  T
Q  218 catttc 223  Q
    ||||||    
T  25731429 catttc 25731434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 18830682 - 18830881
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  18830682 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgcttttaaacgtactaacacgcgcccccaattt 18830781  T
Q  119 ttcattaatgctatgtttgtttg-tctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     |||||||||||||||||||||| || || |||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||  ||||||    
T  18830782 gtcattaatgctatgtttgtttgttccctcttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactactcacttcacaaccaacactt 18830880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 9118860 - 9119065
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  9118860 tagttttctgaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaatgtactatcacgcgcccc 9118959  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||  |    
T  9118960 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttcacaacaaa 9119058  T
Q  212 cactttc 218  Q
    |||||||    
T  9119059 cactttc 9119065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 34813531 - 34813736
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  34813531 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaataatgttttatttgctttttaacatacttacacgcgcccc 34813630  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  34813631 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 34813729  T
Q  212 cactttc 218  Q
    |||||||    
T  34813730 cactttc 34813736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 32968314 - 32968520
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  32968314 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 32968413  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| | ||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  32968414 caatttgtgattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 32968512  T
Q  212 cactttca 219  Q
    ||||||||    
T  32968513 cactttca 32968520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 13917673 - 13917474
Alignment:
Q  21 tgaaaagtttctgacgtggtctattagtattggagtataacaaaaa--gggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||  |||| ||||||||||  ||||||||||||||||||||||    
T  13917673 tgaaaagtttctgacgtggtctatttgtattggagtataacaaaaaaagggcaatgatgacttatatgcttttaaatgtactaacacgcgcccccaattt 13917574  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||| | |||||||    
T  13917573 gtcattaatgctatgtttgtttgtcccctttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactacttacttcacaaatcacacttt 13917475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 26869230 - 26869029
Alignment:
Q  17 tttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  26869230 tttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccccaat 26869131  T
Q  117 ttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaacttacact 215  Q
    || ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |||||    
T  26869130 ttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaacact 26869032  T
Q  216 ttc 218  Q
    |||    
T  26869031 ttc 26869029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 3665858 - 3665694
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  3665858 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 3665759  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  3665758 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 3665694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 17783943 - 17783732
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatt-tgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||||||| |||||||||    
T  17783943 tctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttttatgcttttaaacttacttacacgcgcccccaatttgtcattaatg 17783844  T
Q  129 ctatgtttgtttgtct-cttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcatttcatct 227  Q
    || ||||||||||||| ||| |||||||||| ||||||||| |||||||||  |  | ||||||||||||||||||||||| ||||||||| |||| |||    
T  17783843 ctttgtttgtttgtctccttgtgaattgcaatcgttttacttaaaacactttgacaatacacacactactcacttcacaacctacactttcttttc-tct 17783745  T
Q  228 taaccttctctgc 240  Q
     ||| ||||||||    
T  17783744 aaactttctctgc 17783732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 26029851 - 26029691
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  26029851 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 26029752  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| |||||||||||||||||||||||| ||| |||||| ||||||||||| ||||||    
T  26029751 caatttgtcattaatgctatgtttgtttgtcccttctgaattacaaacgttttaataaaaa 26029691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 22290415 - 22290211
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||| | || ||||| ||||||| ||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||    
T  22290415 tctgaaaaatctccgacgttgtctatttgtattggagtagaacaaaaagggcaatgatgacttatatgcttttaaacgtactaacacgcgcccccaattt 22290316  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     ||||||||||| ||||||||||| | ||||| |||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  22290315 gtcattaatgctttgtttgtttgtccccttttaaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcacactt 22290217  T
Q  217 tcattt 222  Q
    ||||||    
T  22290216 tcattt 22290211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 25682493 - 25682682
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||  |    
T  25682493 tctgaaaagtatctgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgttttatatacttttaaacgtacttacacgcgcccccaa-ct 25682591  T
Q  119 ttcattaatgctatgtttgtttg-tctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||    
T  25682592 gtcattaatgttatgtttgtttgttcccttttgaattgcaaacgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 25682682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 12723205 - 12723370
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  12723205 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 12723304  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  12723305 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 12723370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 18547809 - 18547605
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatt-tgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| || ||||||||||| |||| ||||||||||| ||||    
T  18547809 tctgaaaa-tttctgacgtggtccatttgtattggagtataacaaaaagggcaatgatgattttttatgcttttaaacttacttacacgcgcccctaatt 18547711  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||  |  | ||||||||||||||||||||||| |||||||    
T  18547710 tgtcattaatgctatgtttgtttgtccccttatgaattgcaatcgttttacttaaaacactttgacaatacacacactactcacttcacaacctacactt 18547611  T
Q  217 tcattt 222  Q
    ||||||    
T  18547610 tcattt 18547605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 16953439 - 16953278
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  16953439 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 16953340  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  16953339 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 16953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 27346175 - 27346014
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  27346175 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 27346076  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  27346075 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 27346014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 27406915 - 27406754
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  27406915 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 27406816  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  27406815 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 27406754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 25792146 - 25791982
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  25792146 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 25792047  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||| ||| | | |||||| |||||||||||  |||||||||    
T  25792046 caatttgtcattaatgctgtgtttgttagtcccctctgaattacaaacgttttaaaaaaaacact 25791982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 12859364 - 12859150
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaa---------gggcaatgatgttttatttgcttttaaacatactaac 103  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||         |||||||||||||||||| |||||| |||||||| ||    
T  12859364 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaaaaaaaagggggcaatgatgttttattcgctttttaacatacttac 12859265  T
Q  104 acgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcactt 202  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||    
T  12859264 acgcgcccccaatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcactt 12859166  T
Q  203 cacaacttacactttc 218  Q
    ||||||  ||||||||    
T  12859165 cacaacaaacactttc 12859150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 21123915 - 21123715
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||| |||||||||||||||| ||||||| |||||||  ||||||||||||||| ||||||  |||||||||  |||| |||||||||||||||    
T  21123915 tctgaaaagtctctgacgtggtctatttgtattggtgtataacttaaaagggcaatgatgattttatacgcttttaaatgtacttacacgcgcccccaat 21123816  T
Q  117 ttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    || ||||||||| | |||||||||||| | || |||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||| ||||||    
T  21123815 ttgtcattaatgttgtgtttgtttgtccccttctgaattgcaaacgttttactcaaaacactttgacaaaacacacactactcacttcacaacctacact 21123716  T
Q  216 t 216  Q
    |    
T  21123715 t 21123715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 4635358 - 4635193
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  4635358 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 4635259  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  4635258 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 4635193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 32307415 - 32307580
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||  || |||| ||||||||||    
T  32307415 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 32307514  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  32307515 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 32307580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 14065862 - 14066056
Alignment:
Q  14 agttttctgaaaagttt-ctgacgtggtctattagtattggagtataac-aaaaagggcaatgatgttt-tatttgcttttaaacatactaacacgcgcc 110  Q
    ||||||||||||||||| |||||||||| || | ||||||| ||||||| |||||||||||||||| || | |||||||| |||| ||||| |||||||     
T  14065862 agttttctgaaaagttttctgacgtggtttagttgtattggcgtataactaaaaagggcaatgatgattatttttgcttt-aaacgtactatcacgcgct 14065960  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttt--tgaattgcaaacgttttactaaaaacacttaaaa---caaacacacactactcact 201  Q
    |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||  |||   |||||||||||||||||||    
T  14065961 cccaatttgtcattaatgctgtgtttgtttgtctcttttctgaattgcaaacgttttacttaaaacactataaataccaaacacacactactcact 14066056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 22380463 - 22380263
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaa-aaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||  |||||||||||||||| ||||||| |||||||   |||||||||||||| ||||||  ||||| |||  ||||  ||||||||||||||    
T  22380463 tctgaaaagcctctgacgtggtctatttgtattggtgtataacttgaaagggcaatgatgattttataagcttt-aaatgtactttcacgcgcccccaat 22380365  T
Q  117 ttttcattaatgctatgtttgtttgtctctttt--gaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    || ||||||||||| |||||||||||| | |||  ||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||| |||||    
T  22380364 ttgtcattaatgctgtgtttgtttgtcccctttctgaattgcaaacgttttactcaaaacactttgacaaaacacacactactcacttcacaacctacac 22380265  T
Q  215 tt 216  Q
    ||    
T  22380264 tt 22380263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 19457769 - 19457915
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgat-gttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||  |||||||||  ||||  ||| ||||||| |||    
T  19457769 tctgaaaagtctctgacgtggtctatttgtattggagtataactaaaagggcaatgatatttttataagcttttaaatgtactttcacacgccccc-att 19457867  T
Q  118 tttcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    | || |||||||| |||||||||||||| | |||||||||| ||||||    
T  19457868 tgtcgttaatgctgtgtttgtttgtctcctctgaattgcaatcgtttt 19457915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 7665649 - 7665537
Alignment:
Q  96 atactaacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacac 193  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||| |||  |||  |||||||    
T  7665649 atacaaacacgcgcccccaatttgtcattaatgctatgtttgtttgtctcttctgaattgtaaacattttacttaaaaacac-taagtcaattcacacac 7665551  T
Q  194 tactcacttcacaa 207  Q
    ||||||||||||||    
T  7665550 tactcacttcacaa 7665537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 1655209 - 1655062
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||  ||||||||||||| || ||||||| |||||||  |||||||||||||||  |||||  |||||||||| ||||| |||||||||||||     
T  1655209 tctgaaaagcctctgacgtggtctgtttgtattggtgtataacttaaaagggcaatgatgactttataagcttttaaacgtactatcacgcgcccccaac 1655110  T
Q  117 ttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    | | |||||||||  |||||||||||||| | ||||| |||||||||||    
T  1655109 tgt-cattaatgccgtgtttgtttgtctcctctgaatcgcaaacgtttt 1655062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 216
Target Start/End: Complemental strand, 17051866 - 17051676
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||||||| ||||||||   ||| ||  ||||  |||||||||||||||| |||||||||    
T  17051866 tctgacatggtctattggtattggcgtataactaaaagggcaatgatgattttattt-agtttgaatgtactttcacgcgcccccaatttgtcattaatg 17051768  T
Q  129 ctatgtttgtttgtctcttt--tgaattgcaaacg-ttttactaaaaacac-ttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    || |||||| ||||| | ||  |||||||  |||| |||||||  |||||| || | | |||| ||||| ||||||||||||||||||||||    
T  17051767 ctgtgtttgcttgtccccttcctgaattggtaacgtttttactttaaacacttttacaaaaacgcacaccactcacttcacaacttacactt 17051676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 11239920 - 11239823
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    ||||||||| |||||||||||||| | || ||||||||||||| |||||| ||||||| |  |  ||||||||||||||||||||||||| |||||||    
T  11239920 tcattaatgttatgtttgtttgtccccttctgaattgcaaacgctttactcaaaacaccttgacaaaacacacactactcacttcacaacctacactt 11239823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11239979 - 11239925
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaat 73  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  11239979 tctgaaaagtctctgacgtggtctattcgtattggagtataactaaaagggcaat 11239925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 16880523 - 16880403
Alignment:
Q  97 tactaacacgcgcccccaatttttcattaatgctatgtttgtttgtctctttt-gaattgcaaacgtttt-actaaaaacacttaaaacaaacacacact 194  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||| | ||  || |||||||| |||| ||||| |||||||| |  |||||||||||    
T  16880523 tactatcacgcgcccccaattgt-cattaatgttgtgtttgtttgtccccttccgagttgcaaacatttttactaacaacacttagacaaaacacacact 16880425  T
Q  195 actcacttcacaacttacactt 216  Q
    |||||||||||||| |||||||    
T  16880424 actcacttcacaacctacactt 16880403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 22809559 - 22809510
Alignment:
Q  171 aaacacttaaaacaaacacacactactcacttcacaacttacactttcat 220  Q
    ||||||||| |  ||| ||||||||||||||||||||| |||||||||||    
T  22809559 aaacacttagacaaaatacacactactcacttcacaacctacactttcat 22809510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 16309613 - 16309377
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16309613 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacttactaaca 16309514  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||| |||||| |||    
T  16309513 cgcgccctcaatttgtcattaatgctatgtttgtttgtcccttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacacaactcacatca 16309415  T
Q  205 caacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16309414 caactcacactttcatttcatcttaaccttctctgcta 16309377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3377436 - 3377195
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  3377436 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaaggacaatgatgttttatatgcatttaaacgtact 3377337  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactca 199  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  3377336 aacacgcgccccctatttgtccttaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaaaaacactt-aaacaaacacacactactca 3377238  T
Q  200 cttcacaacttacactttcatttcatcttaaccttctctgcta 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  3377237 cttcacaactcacactttcatttcatcttaaccttctctgcta 3377195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 40463098 - 40463311
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  40463098 ccaaaggttagttttctgaaaaatttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaatgtactaaca 40463197  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40463198 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttaataaaaacacttaaaacaaacacacactactcacttca 40463297  T
Q  205 caacttacactttc 218  Q
    ||||  ||||||||    
T  40463298 caacaaacactttc 40463311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 15203163 - 15203386
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa--agggcaatgatgttttatttgcttttaaacata 98  Q
    ||||| ||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||    
T  15203163 ttaactaaaggttagttctctaaaaagtctctgacgtggtctatttgtattggagtataacaaaaaaagggcaatgatgttttatatgcttttaaacgta 15203262  T
Q  99 ctaacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactc 198  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15203263 ctaacacgcgcccccaatttgtcattaatgctatgtttgtttgtctctcttgaattgcaaacgttttactaaaaacactt-aaacaaacacacactactc 15203361  T
Q  199 acttcacaacttacactttcatttc 223  Q
    ||||||||||| |||||||||||||    
T  15203362 acttcacaactcacactttcatttc 15203386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 14842438 - 14842660
Alignment:
Q  5 ccaaaggttagttttctgaaaagttt-ctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaac 103  Q
    ||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||    
T  14842438 ccaaatgttagttttctgaaaagttttctgacgtggtctatctgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaatgtactaac 14842537  T
Q  104 acgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  14842538 acacgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacactt-aaacaaacacacactactcacttc 14842636  T
Q  204 acaacttacactttcatttcatct 227  Q
    |||||| |||||||||||||||||    
T  14842637 acaactcacactttcatttcatct 14842660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 27821286 - 27821499
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||| |||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27821286 ccaaaagttagttttctgaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 27821385  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||  |||||||||||||||||    
T  27821386 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttatgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttc 27821484  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  27821485 acaacaaacactttc 27821499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 4994151 - 4994364
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||| ||||    
T  4994151 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgcttttaaatgtaccaaca 4994250  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||  |||  |||||||||||||||||    
T  4994251 cgcgcccccaatttgtcattaatgctatgtttgtttgtcttttctgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttc 4994349  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  4994350 acaacaaacactttc 4994364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 4998187 - 4997974
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||| ||||    
T  4998187 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgcttttaaatgtaccaaca 4998088  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||  |||  |||||||||||||||||    
T  4998087 cgcgcccccaatttgtcattaatgctatgtttgtttgtcttttctgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttc 4997989  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  4997988 acaacaaacactttc 4997974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 18758846 - 18759059
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  18758846 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatctgcatttaaacgtactaaca 18758945  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||  |||  |||||||||||||||||    
T  18758946 cgcgcccccaatttgtcattaatgctatgtttgttcgtctcttttgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttc 18759044  T
Q  204 acaacttacactttc 218  Q
    |||||  ||||||||    
T  18759045 acaacaaacactttc 18759059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 17922591 - 17922385
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17922591 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 17922492  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  17922491 caatttgtcattaatgctatgtttgtttgtctcttctgaattgtaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 17922393  T
Q  211 acactttc 218  Q
    ||||||||    
T  17922392 acactttc 17922385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 11540507 - 11540307
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||    
T  11540507 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgtttttaaacgtactaacacgcgcccccaattt 11540408  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     | ||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  11540407 gtaattaatgctttgtttgtttgtcctcttttgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaactcacactt 11540309  T
Q  217 tc 218  Q
    ||    
T  11540308 tc 11540307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 19950757 - 19950963
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19950757 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 19950856  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  19950857 caatttgtcattaatgctatgtttgtttgtctcctctgaattgtaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 19950955  T
Q  211 acactttc 218  Q
    ||||||||    
T  19950956 acactttc 19950963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 39516594 - 39516791
Alignment:
Q  27 gtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttcattaa 126  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||    
T  39516594 gtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgcttttaaacgtactaacacgcgcccccaatttgtcattaa 39516693  T
Q  127 tgctatgtttgtttgt-ctcttttgaattgcaaacg--ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcattt 222  Q
    |||| ||||||||||| | |||||||||||||| ||  ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  39516694 tgctttgtttgtttgtccccttttgaattgcaatcgttttttactaaaaacactt-agacaaacacacactactcacttcacaactcacactttcattt 39516791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 55751615 - 55751820
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  55751615 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 55751714  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  55751715 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 55751813  T
Q  212 cactttc 218  Q
    |||||||    
T  55751814 cactttc 55751820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 27192389 - 27192236
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27192389 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 27192290  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttta 166  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  27192289 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgtttta 27192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24023831 - 24024037
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24023831 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 24023930  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||      
T  24023931 caatttgtcattaatgctgtgtttgtttgtctcttctgaattgtaaacgttttacttaaaaacac-taagtcaattcacacacttctcacttcacaacaa 24024029  T
Q  211 acactttc 218  Q
    ||||||||    
T  24024030 acactttc 24024037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 16260357 - 16260152
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16260357 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 16260258  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  16260257 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 16260159  T
Q  212 cactttc 218  Q
    |||||||    
T  16260158 cactttc 16260152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 22000910 - 22000746
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  22000910 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 22000811  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||    
T  22000810 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacact 22000746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 10295160 - 10294970
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||    
T  10295160 tctgaaaagtatctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgtttttaaacgtactaacacgcgcccccaattt 10295061  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
     ||||||||||| ||||||||||| | |||||||||||||| || ||||||||||||||||| | ||||| |||||||||||||||||||||    
T  10295060 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgtttttactaaaaacactt-agacaaatacacactactcacttcacaac 10294970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 455055 - 454850
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  455055 tagttttctgaagagtctctgatgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 454956  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| ||||||| |||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  454955 caatttgtcattaatgctgtgtttgtgtgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 454857  T
Q  212 cactttc 218  Q
    |||||||    
T  454856 cactttc 454850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 30932852 - 30933056
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||    
T  30932852 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcg-ccc 30932950  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  30932951 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 30933049  T
Q  212 cactttc 218  Q
    |||||||    
T  30933050 cactttc 30933056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 10746962 - 10747122
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  10746962 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 10747061  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  10747062 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 10747122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 10960731 - 10960891
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  10960731 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 10960830  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  10960831 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 10960891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 14846306 - 14846469
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  14846306 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttt-atttgctttttaacatacttacacgcgcccc 14846404  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
     ||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||    
T  14846405 taatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacact 14846469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 36022782 - 36022622
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  36022782 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 36022683  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  36022682 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 36022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 49512027 - 49511866
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  49512027 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 49511928  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  49511927 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 49511866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 19575406 - 19575278
Alignment:
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttac 212  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||    
T  19575406 caatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaaaacactt-aaacaaacacacactactcacttcacaactcac 19575308  T
Q  213 actttcatttcatcttaaccttctctgcta 242  Q
    |||||||||||||||||| |||||||||||    
T  19575307 actttcatttcatcttaatcttctctgcta 19575278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 27661104 - 27660939
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||    
T  27661104 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 27661005  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  27661004 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 27660939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 24644823 - 24644662
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  24644823 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 24644724  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  24644723 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 24644662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 15010413 - 15010484
Alignment:
Q  107 cgcccccaatttttcattaatgctatgtttgtttgtc-tcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||||| | | ||||||||  | |||||||||||| |||| |||||||||||||||||||| ||||||||    
T  15010413 cgcccccactatgtcattaattttgtgtttgtttgtcctcttctgaattgcaaacgttttactcaaaacact 15010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 11519432 - 11519400
Alignment:
Q  190 acactactcacttcacaacttacactttcattt 222  Q
    |||||||||||||||||||| ||||||||||||    
T  11519432 acactactcacttcacaactcacactttcattt 11519400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 1818 - 2057
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  1818 ttaaccaaaggttatttatctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgattttaaacgtact 1917  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1918 aacacgcgcccccaacttgtctttaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacactt-aaacaaacacacactactcac 2016  T
Q  201 ttcacaacttacactttcatttcatctt-aaccttctctgc 240  Q
    ||||||||| ||||||||||||| |||| ||||||||||||    
T  2017 ttcacaactcacactttcatttcgtcttcaaccttctctgc 2057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 25207478 - 25207717
Alignment:
Q  1 ttaaccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatact 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25207478 ttaaccaaaggttatttatctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtact 25207577  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25207578 aacacgagcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacactt-aaacaaacacacactactcac 25207676  T
Q  201 ttcacaacttacactttcatttcat-cttaaccttctctgc 240  Q
    |||| |||| ||||||||||||| | || ||||||||||||    
T  25207677 ttcaaaactcacactttcatttcgtcctaaaccttctctgc 25207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 9164033 - 9163793
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9164033 ccaaaggttagttttttgaaaagtttctgacgtggtctatttgtactggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 9163934  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact---aaaaacacttaaaacaaacacacactactcact 201  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  |   ||||||||||||| |||||||||||||||||||    
T  9163933 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgttttttttataaaaacacttaaa-caaacacacactactcact 9163835  T
Q  202 tcacaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    |||||||| ||||| |||||||| |||  ||||||||||||||    
T  9163834 tcacaactcacactctcatttca-cttcaaaccttctctgcta 9163793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 20983726 - 20983507
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20983726 ccaaaagttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 20983627  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcactt 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||    
T  20983626 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcactt 20983528  T
Q  203 cacaacttacactttcatttc 223  Q
    ||||||  |||||||||||||    
T  20983527 cacaacaaacactttcatttc 20983507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 15884256 - 15884477
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  15884256 ccaaagggtagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattttcttttaaacgtactaaca 15884355  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||  | ||||||||||||||||||||    
T  15884356 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgacaaatacacttaagcaaaaacacacactactcacttc 15884455  T
Q  204 acaacttacactttcatttcat 225  Q
    |||||| ||||| |||||||||    
T  15884456 acaactcacactctcatttcat 15884477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 9437725 - 9437519
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9437725 tagttttctgaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 9437626  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  9437625 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 9437527  T
Q  211 acactttc 218  Q
    ||||||||    
T  9437526 acactttc 9437519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 6873672 - 6873878
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  6873672 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaaggcaatgatgttttatttgctttttaacatactaacacgcgcccc 6873771  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  6873772 caatttgtcattaatgctatgtttgtttgtctcttctgaattgtaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 6873870  T
Q  211 acactttc 218  Q
    ||||||||    
T  6873871 acactttc 6873878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 18432982 - 18432784
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  18432982 tctgaaaaatctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgaattatatgcttttaaacatactaacacgcgcccccaattt 18432883  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     ||||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||    
T  18432882 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgttttactaaaaacactt-agacaaacacacactactcacttcacaacatgcacttt 18432784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 2712055 - 2712219
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  2712055 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgctttttaacatactaacacgcgcccc 2712154  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  2712155 caatttgtcattaatgctatgtttgtttgtcccttctgaattgcaaacgttttaataaaaacact 2712219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 17956556 - 17956761
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  17956556 tagttttctgaagagtctctgacgtggtctattcgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 17956655  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  17956656 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 17956754  T
Q  212 cactttc 218  Q
    |||||||    
T  17956755 cactttc 17956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 26396537 - 26396742
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  26396537 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 26396636  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaaca-aacacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||  ||   ||||||||||||||||||||||  |    
T  26396637 caatttgtcattaatgctatgtttgtttgtctctattgaattacaaacgttttaataaaaacac-taagtcatttcacacactactcacttcacaacaaa 26396735  T
Q  212 cactttc 218  Q
    |||||||    
T  26396736 cactttc 26396742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 463416 - 463621
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  463416 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgctttttaacatactatcacgcgcccc 463515  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  463516 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 463614  T
Q  212 cactttc 218  Q
    |||||||    
T  463615 cactttc 463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 4216468 - 4216263
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  4216468 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 4216369  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||| |||  |||  |||||| |||||||||||||||  |    
T  4216368 caatttgtcattaatgctgtgtttgtttatcccttttgaattgcaaacgttttattaaaaacac-taagtcaattcacacattactcacttcacaacaaa 4216270  T
Q  212 cactttc 218  Q
    |||||||    
T  4216269 cactttc 4216263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 22093602 - 22093397
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||    
T  22093602 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttcattcgctttttaacatacttacacgcgcccc 22093503  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||| | |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  22093502 caatttgtcattaatgttgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 22093404  T
Q  212 cactttc 218  Q
    |||||||    
T  22093403 cactttc 22093397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 8621824 - 8621617
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaa--gggcaatgatgttttatttgcttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| |||||| |||||||| |||||||||    
T  8621824 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcc 8621725  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaact 209  Q
    |||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||     
T  8621724 cccaatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaaca 8621626  T
Q  210 tacactttc 218  Q
     ||||||||    
T  8621625 aacactttc 8621617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 24738560 - 24738396
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  24738560 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 24738461  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  24738460 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 24738396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 26692185 - 26692350
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  26692185 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 26692284  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  26692285 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 26692350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 171350 - 171143
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatt--tgcttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||  |  |||| |||||||| |||||| ||    
T  171350 tagttttctgaagagtctctgacgtggtctgtttgtattggagtataacaaaaagggcaatgatgttttattcgttttttttaacatacttacacgcacc 171251  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaact 209  Q
    |||||||| ||||||||| | |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||     
T  171250 cccaatttgtcattaatgttgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaaca 171152  T
Q  210 tacactttc 218  Q
     ||||||||    
T  171151 aacactttc 171143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 9089694 - 9089533
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||    
T  9089694 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 9089595  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||| | |||||||||||| ||| |||||| ||||||||||| ||||||    
T  9089594 ccaatttgtcattaatgttgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 9089533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 40048547 - 40048713
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaa-gggcaatgatgtttt-atttgcttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||| |||||||||    
T  40048547 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgcc 40048646  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  40048647 cccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 40048713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 11009645 - 11009480
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||||||    
T  11009645 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 11009546  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  11009545 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 11009480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 1992016 - 1991851
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  1992016 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 1991917  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  1991916 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 1991851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 42870293 - 42870128
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  42870293 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 42870194  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  42870193 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 42870128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 8008509 - 8008670
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  8008509 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 8008608  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  8008609 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 8008670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 4421348 - 4421476
Alignment:
Q  90 ttaaacatactaacacgcgcccccaatttttcattaatgctatgtttgtttgtctctttt--gaattgcaaacgttttactaaaaacacttaaaacaaac 187  Q
    |||||| ||||  |||||||||||||||| ||||||||| | |||||||||||| | |||  |||||||||||||||||||||||||||||  |  ||||    
T  4421348 ttaaacgtactttcacgcgcccccaatttgtcattaatgttgtgtttgtttgtcccctttctgaattgcaaacgttttactaaaaacactttgacaaaac 4421447  T
Q  188 acacactactcacttcacaacttacactt 216  Q
    |||||||||| |||||||||| |||||||    
T  4421448 acacactacttacttcacaacctacactt 4421476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 13180567 - 13180697
Alignment:
Q  30 tctgacgtggtctattagtattggagtataaca-aaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||| ||||||||| ||||||| |||||||  |||||||||||||||  |||||  |||||||||  ||||  |||||||||||||||| ||||||||    
T  13180567 tctgacatggtctatttgtattggtgtataacttaaaagggcaatgatgactttataagcttttaaatgtactttcacgcgcccccaatttgtcattaat 13180666  T
Q  128 gctatgtttgtttgtctcttttgaattgcaa 158  Q
    ||| |||||||||||||| | ||||||||||    
T  13180667 gctgtgtttgtttgtctcctctgaattgcaa 13180697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 21695168 - 21695068
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| | ||||| |||||| | || |||||||||||||||||  || |||||||||| |  || |||||||||||||||||||||| ||||||||    
T  21695168 tcattaatgatgtgtttatttgtccccttctgaattgcaaacgtttttgctcaaaacacttagacaaatcacacactactcacttcacaacctacacttt 21695069  T
Q  218 c 218  Q
    |    
T  21695068 c 21695068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 14138021 - 14137906
Alignment:
Q  104 acgcgcccccaatttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcact 201  Q
    |||||||||||||| | |||||||| | |||||||||||| | || |||||||||||| |||| ||| ||  |||||| |  ||||||||||||||||||    
T  14138021 acgcgcccccaattgt-cattaatgttgtgtttgtttgtccccttctgaattgcaaacctttttactcaa--cacttagataaaacacacactactcact 14137925  T
Q  202 tcacaacttacactttcat 220  Q
    ||||||| ||||| |||||    
T  14137924 tcacaacctacacgttcat 14137906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 13660951 - 13660851
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| | |||||||||||| | || |||||||||||||||||  || |||||||||| |  || |||||| ||| |||||||||||  |||||||    
T  13660951 tcattaatgttttgtttgtttgtccccttctgaattgcaaacgtttttgctcaaaacacttatacaaatcacacattacccacttcacaacccacacttt 13660852  T
Q  218 c 218  Q
    |    
T  13660851 c 13660851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 19422813 - 19422575
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19422813 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 19422714  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||| ||||    
T  19422713 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcccttc 19422615  T
Q  204 acaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    |||||| ||||| |||||||| |||  ||||||||||||||    
T  19422614 acaactcacactctcatttca-cttcaaaccttctctgcta 19422575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 23465699 - 23465938
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23465699 ccaaaggttagttttctgaaaagtttctgacatggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 23465798  T
Q  105 cgcgcccccaatttt-tcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcactt 202  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||    
T  23465799 cgcgcccccaattttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcactt 23465897  T
Q  203 cacaacttacactttcatttcatct-taaccttctctgcta 242  Q
    ||||||| |||||||| ||||||||  ||||||||||||||    
T  23465898 cacaactcacactttcttttcatctcaaaccttctctgcta 23465938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 30321089 - 30321310
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30321089 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 30321188  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  30321189 cacgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaacacacactactcacttc 30321288  T
Q  204 acaacttacactttcatttcat 225  Q
    |||||| ||||| |||||||||    
T  30321289 acaactcacactctcatttcat 30321310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 19229267 - 19229028
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  19229267 ccaaaggttagttttctgaaaaatttctgacgtggtctatttgtattggagtataacaaaaaaggcaatgatgttttatttgcttttaaacgtactaaca 19229168  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  19229167 cgcgcccctaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaacacacactactcacttc 19229068  T
Q  204 acaacttacactttcatttcatct-taaccttctctgcta 242  Q
    |||||| ||||| ||||||||| |  ||||||||||||||    
T  19229067 acaactcacactctcatttcatttcaaaccttctctgcta 19229028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 25680384 - 25680611
Alignment:
Q  16 ttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaa 115  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| || |||||| |||||||||    
T  25680384 ttttctgaaaagtttctgatgtggtctatttgtattggagtataacaaaaagggcaacgatgttttattagcttttaaacgtattaacactcgcccccaa 25680483  T
Q  116 tttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    ||| |||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  25680484 tttgtcattaatgctatgtttgtttgtctcttttgaattgcaaaagtttttgataaaaacactt-aaacaaacacacactactcacttcacaactcacac 25680582  T
Q  215 tttcatttcatct-taaccttctctgcta 242  Q
    ||||||||| |||  ||||||||||||||    
T  25680583 tttcatttcgtctcaaaccttctctgcta 25680611  T

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Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 3837325 - 3837127
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  3837325 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaagagggcaatgatgatttatatgcttttaaacgtactaacacgcgcccccaattt 3837226  T
Q  119 ttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     |||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||  |||||||    
T  3837225 gtcattaatgctatgtttgtttgtcccttatgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaaccaacacttt 3837127  T

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Target: chr8; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 19133160 - 19132954
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19133160 tagttttctgaagagtctctgacttggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacacgcccc 19133061  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  19133060 caatttgtcattaatgttatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 19132962  T
Q  211 acactttc 218  Q
    ||||||||    
T  19132961 acactttc 19132954  T

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Target: chr8; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 26115751 - 26115546
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  26115751 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcg-ccc 26115653  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  26115652 caatttgtcattaatgctatgtttgtttgtctcttctgaattacaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 26115554  T
Q  211 acactttc 218  Q
    ||||||||    
T  26115553 acactttc 26115546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 6155545 - 6155340
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| |    
T  6155545 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcctc 6155446  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  6155445 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaacaaa 6155347  T
Q  212 cactttc 218  Q
    |||||||    
T  6155346 cactttc 6155340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 44485593 - 44485388
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  44485593 tagttttctgaagagtctctgacgtggtttatttgtactggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 44485494  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  44485493 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 44485395  T
Q  212 cactttc 218  Q
    |||||||    
T  44485394 cactttc 44485388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 15787060 - 15787225
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  15787060 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaaagggcaatgatgttttacttgctttttaacatactaacacgcgccc 15787159  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  15787160 ccaatttgtcattaatgctatgtttgtttgtcccttctgaattgcaaacgttttaataaaaacact 15787225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 23787892 - 23787690
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||| |||| |||| |||||| ||||    
T  23787892 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgattttataagcttttaaacgtacttacacacgccccaaatt 23787793  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttac-taaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    | ||||||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||  |  ||||||||||||||||||||||||| ||||||    
T  23787792 tgtcattaatgctatgtttgtttgtccccttatgaattgcaaacgttttacttaaaaacactttgacaaaacacacactactcacttcacaacctacact 23787693  T
Q  216 ttc 218  Q
    |||    
T  23787692 ttc 23787690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 22152686 - 22152887
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||||| |||| |||||| |||||||||    
T  22152686 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgattttttatgcttttaaacttacttacacgcacccccaatt 22152785  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||  |  | ||||||||||||||||||||||| |||||||    
T  22152786 tgtcattaatgctatgtttgtttgtccccttatgaattgcaatcgttttacttaaaacactttgacaatacacacactactcacttcacaacctacactt 22152885  T
Q  217 tc 218  Q
    ||    
T  22152886 tc 22152887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 36297402 - 36297242
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  36297402 tagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 36297303  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  36297302 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 36297242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 9345576 - 9345416
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  9345576 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 9345477  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  9345476 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 9345416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 3355030 - 3355190
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  3355030 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 3355129  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
     ||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  3355130 taatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 3355190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 29080870 - 29080705
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  29080870 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 29080771  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  29080770 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 29080705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 32084090 - 32084255
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  32084090 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 32084189  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  32084190 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 32084255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 13694964 - 13695129
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||    
T  13694964 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacgtacttacacgcgccc 13695063  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  13695064 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 13695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 246287 - 246122
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    ||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  246287 tagttttctaaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 246188  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||| | |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  246187 ccaatttgtcattaatgttgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 246122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 809407 - 809242
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    ||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||    
T  809407 tagttttctaaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgccc 809308  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||| | |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  809307 ccaatttgtcattaatgttgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 36082390 - 36082225
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  36082390 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 36082291  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  36082290 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 36082225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 216
Target Start/End: Complemental strand, 21292769 - 21292581
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaa-aaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||||||||||||| ||||||| |||||||   |||||||||||||| ||||| | ||||| |||| ||||  ||||| |||| ||||| ||||||||    
T  21292769 tctgacgtggtctatttgtattggtgtataactttaaagggcaatgatgattttaatagcttt-aaacgtactttcacgcacccctaatttgtcattaat 21292671  T
Q  128 gctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | | |||||||||||| | || ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||  |||||||    
T  21292670 gttgtgtttgtttgtccccttctgaattgcaaacgttttactaaaaacactttgacaaaacacacactactcacttcacaagctacactt 21292581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 22667537 - 22667336
Alignment:
Q  18 ttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||| | ||||||||||||||||| ||||||| |||| ||     |||||||||||| ||| |||||||| || ||||||| || ||| |||||||    
T  22667537 ttctgaaacgcttctgacgtggtctatttgtattggtgtatgactttggagggcaatgatgcttt-tttgctttgaa-catactatcatgcgtccccaat 22667440  T
Q  117 ttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    | | |||||||||| |||||||||||| | || |||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||| |||||     
T  22667439 tat-cattaatgctgtgtttgtttgtccccttctgaattgcaaacgttttactcaaaacacttagacaaaacacacactactcacttcacaacctacaca 22667341  T
Q  216 ttcat 220  Q
    |||||    
T  22667340 ttcat 22667336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 19933596 - 19933400
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaa-gggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||  |||||||||||||||| ||||||| |||| ||   |  ||||||||||| ||| |||||||| ||   ||||| |||||||||||||||    
T  19933596 tctgaaaagcctctgacgtggtctatttgtattggtgtatgactttagtgggcaatgatgattt-tttgctttgaatg-tactatcacgcgcccccaatt 19933499  T
Q  118 tttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
     | |||||||||| | ||||| |||| |  | ||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||| ||||||    
T  19933498 gt-cattaatgctgtatttgtctgtccccgtctgaattgcaaacgtttttactaaaaacacttagacaaaacacacactactcacttcacaacctacact 19933400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 24649376 - 24649176
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||| |||||||||||| |||| ||||||| |||| ||  || |||||||||||| ||| || ||||| ||   ||||| | ||||||||||| |    
T  24649376 tctgaaaagcttctgacgtggtttatttgtattggtgtatgacttaagagggcaatgatgattt-ttagctttgaatg-tactatctcgcgcccccaaat 24649279  T
Q  118 tttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     | |||||||| | |||||||||||| | || |||||||||| |||||||||||||||||||  |  || |||||||||| ||||| ||||| |||||||    
T  24649278 gt-cattaatgttgtgtttgtttgtccccttctgaattgcaatcgttttactaaaaacactttgacaaatcacacactacacacttaacaacctacactt 24649180  T
Q  217 tcat 220  Q
    ||||    
T  24649179 tcat 24649176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 16741157 - 16741118
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctat 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16741157 ccaaaggttagttttctgaaaagtttctgacgtggtctat 16741118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 17263737 - 17263636
Alignment:
Q  120 tcattaatgctatgtttgtttgtctctttt--gaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    ||||||||| | |||||||||||| |||||  |||||||||||||||| ||| |||||| ||| |  || |||||||||||||||||||||| |||| ||    
T  17263737 tcattaatgatgtgtttgtttgtcccttttctgaattgcaaacgtttttactcaaaacaattagacaaatcacacactactcacttcacaacctacattt 17263638  T
Q  217 tc 218  Q
    ||    
T  17263637 tc 17263636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 20378182 - 20378281
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||||| |||||||||||| | || ||||||||||||||||| | | ||||| |||| |  || ||||||||||||||| |||||| ||||||||    
T  20378182 tcattaatgctgtgtttgtttgtccccttctgaattgcaaacgtttttattcaaaactcttagacaaatcacacactactcactacacaacctacacttt 20378281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 150070 - 150291
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  150070 ccaaaggttatttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 150169  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| || ||||||||||||||||||||    
T  150170 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagaaaaaacacacactactcacttc 150269  T
Q  204 acaacttacactttcatttcat 225  Q
    |||||| ||||| |||||||||    
T  150270 acaactcacactctcatttcat 150291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 7683576 - 7683356
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7683576 ccaaaggttagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatacttaca 7683477  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| || ||||  ||||||||||| ||||||||||||||||||||||||    
T  7683476 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaatcgtttttgataaaaacactt-aaacaaacacacactactcacttc 7683378  T
Q  204 acaacttacactttcatttcat 225  Q
    |||||| |||||||||||||||    
T  7683377 acaactcacactttcatttcat 7683356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 19183338 - 19183133
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19183338 tagttttctgaagagtctctgacttggtctatttgtattggagtataacaaatagggcaatgatgttttatttgcttttaaacatactaacacacgcccc 19183239  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||  ||||||||||||||||||||||  |    
T  19183238 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttactaaaaacac-taagtcaattcacacactactcacttcacaacaaa 19183140  T
Q  212 cactttc 218  Q
    |||||||    
T  19183139 cactttc 19183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 4171723 - 4171517
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4171723 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaacgatgttttatttgctttttaacatactaacacgcgcccc 4171624  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||      
T  4171623 caatttgtcattaatgctatgtttgtttgtctcttctgaattgcaaacgttttacttaaaaacac-taagtcaattcacacactactcacttcacaacaa 4171525  T
Q  211 acactttc 218  Q
    ||||||||    
T  4171524 acactttc 4171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 5646108 - 5646315
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5646108 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatactaacacgcgcccc 5646207  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact--aaaaacacttaaaacaa-acacacactactcacttcacaact 209  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||| |||  |||  ||||||||||||||||||||||     
T  5646208 caatttgtcattaatgctatgtttgtttgtctcttctgaattacaaacgttttacttaaaaaacac-taagtcaattcacacactactcacttcacaaca 5646306  T
Q  210 tacactttc 218  Q
     ||||||||    
T  5646307 aacactttc 5646315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 7511693 - 7511488
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  7511693 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 7511594  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  7511593 caatttgtcattaatgctatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 7511495  T
Q  212 cactttc 218  Q
    |||||||    
T  7511494 cactttc 7511488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 51652280 - 51652484
Alignment:
Q  14 agttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgccccc 113  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  51652280 agttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgccccc 51652379  T
Q  114 aatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaacttac 212  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||| |||| ||||||||| |||  |||  ||||||||||||||||||||||  ||    
T  51652380 aatttgtcattaatgttatgtttgtttgtctctattgaattgcaaacggtttaataaaaacac-taagtcaattcacacactactcacttcacaacaaac 51652478  T
Q  213 actttc 218  Q
    ||||||    
T  51652479 actttc 51652484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 12734949 - 12734744
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  12734949 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 12734850  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||| | |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  |||||||| |||||||||||||  |    
T  12734849 caatttgtcattaatgttgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacac-taagtcaattcacacacttctcacttcacaacaaa 12734751  T
Q  212 cactttc 218  Q
    |||||||    
T  12734750 cactttc 12734744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 7695877 - 7696041
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  7695877 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 7695976  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  7695977 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacact 7696041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 12619556 - 12619763
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtat--aacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcc 110  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||   |||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  12619556 tagttttctgaagagtctctgacgtggtctatttgtattggagtaataaacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcc 12619655  T
Q  111 cccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaact 209  Q
    |||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||     
T  12619656 cccaatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaacac-taagtcaattcacacactactcacttcacaaca 12619754  T
Q  210 tacactttc 218  Q
     ||||||||    
T  12619755 aacactttc 12619763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 21868084 - 21867878
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| |||||||    
T  21868084 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttcattcgctttttaacatacttacaagcgcccc 21867985  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttact-aaaaacacttaaaacaa-acacacactactcacttcacaactt 210  Q
    |||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| | |||||||| |||  |||  ||||||||||||||||||||||      
T  21867984 caatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttattaaaaaacac-taagtcaattcacacactactcacttcacaacaa 21867886  T
Q  211 acactttc 218  Q
    ||||||||    
T  21867885 acactttc 21867878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 36242836 - 36243001
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgtttt-atttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  36242836 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatacttacacgcgccc 36242935  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  36242936 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 36243001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 35644443 - 35644607
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  35644443 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 35644542  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    |||||| ||||||||| | |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  35644543 caatttgtcattaatgttgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 35644607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 3176011 - 3175850
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  3176011 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 3175912  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||    
T  3175911 ccaatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaa 3175850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 5837624 - 5837459
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  5837624 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 5837525  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  5837524 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 5837459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 38099505 - 38099340
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  38099505 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 38099406  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    | ||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  38099405 caaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 38099340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 47614337 - 47614502
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  47614337 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 47614436  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  47614437 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 47614502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 20879406 - 20879607
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttattt-gcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||||||||||||    |||| ||||||||||||||||||||||||||||||| ||| |   |||||||||| |||| ||||||||||||||||    
T  20879406 tctgaaaagtttctgacgta---tatttgtattggagtataacaaaaagggcaatgatgatttttcaagcttttaaacttacttacacgcgcccccaatt 20879502  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    | ||||||||||||||||||||||| | ||| |||||||||| |||||||  |||||||||||  |  | ||||||||||||||||||||||| ||||||    
T  20879503 tgtcattaatgctatgtttgtttgtccccttatgaattgcaatcgttttagttaaaaacactttgacaatacacacactactcacttcacaacctacact 20879602  T
Q  216 ttcat 220  Q
    |||||    
T  20879603 ttcat 20879607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 19166057 - 19166258
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    ||||||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||||| ||||||  |||||||||  |||| |||||||||||||||    
T  19166057 tctgaaaagtttctgacgtggtctatttgtattggtgtataacttaaaagtgcaatgatgattttatacgcttttaaatgtacttacacgcgcccccaat 19166156  T
Q  117 ttttcattaatgctatgtttgtttgtctc-ttttgaattgcaaacgttttact-aaaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    || ||||||||||| |||||||||||| | || || ||||||||||||||||| | ||||||||  |  ||||||||||||||||||||||||| |||||    
T  19166157 ttgtcattaatgctgtgtttgtttgtcccattctgtattgcaaacgttttactcataaacactttgacaaaacacacactactcacttcacaacctacac 19166256  T
Q  215 tt 216  Q
    ||    
T  19166257 tt 19166258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 35396901 - 35397062
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  35396901 tagttttctgaagagtctctgacgtggtttatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 35397000  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  35397001 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 35397062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 21212168 - 21212275
Alignment:
Q  103 cacgcgcccccaatttttcattaatgctatgtttgtttgtctctttt--gaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    |||||||||||||||| ||||||||| | |||||||||||| | |||  ||||||||||||||||||| |||||||||  |  |||||||||||||||||    
T  21212168 cacgcgcccccaatttgtcattaatgttgtgtttgtttgtcccctttctgaattgcaaacgttttactcaaaacactttgacaaaacacacactactcac 21212267  T
Q  201 ttcacaac 208  Q
    ||||||||    
T  21212268 ttcacaac 21212275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 21130797 - 21130908
Alignment:
Q  107 cgcccccaatttttcattaatgctatgtttgtttgtctcttttg--aattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||| ||||||||| | |||||||||||| | |||   |||||||||||||||| | |||||||||  |  |||||||||||||||||||||    
T  21130797 cgcccccaatttgtcattaatgttgtgtttgtttgtcccctttcttaattgcaaacgttttattcaaaacactttgacaaaacacacactactcacttca 21130896  T
Q  205 caacttacactt 216  Q
    |||| |||||||    
T  21130897 caacctacactt 21130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 20933620 - 20933522
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| | | |||||||||| | || |||||||||||||||||||| |||||||||| |  || |||||||||||||||||||||| ||||||||    
T  20933620 tcattaatgttgtatttgtttgtccccttctgaattgcaaacgttttactcaaaacacttagacaaatcacacactactcacttcacaacctacacttt 20933522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 22125810 - 22125711
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| |||||||||||||| | || |||||||||||||||||  || |||||||||| |  || |||||||||||||||||||||| ||||||||    
T  22125810 tcattaatgttatgtttgtttgtccccttctgaattgcaaacgtttttgctcaaaacacttagacaaatcacacactactcacttcacaacctacacttt 22125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 22460559 - 22460674
Alignment:
Q  106 gcgcccccaatttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||||||| | |||||||  | |||||||||||| | || |||||||||| |||||| ||| |||||||||| |  ||||||||||||||||||||    
T  22460559 gcgcccccaattgt-cattaatattgtgtttgtttgtccccttctgaattgcaatcgtttttactcaaaacacttagacaaaacacacactactcacttc 22460657  T
Q  204 acaacttacactttcat 220  Q
    ||||| ||||| |||||    
T  22460658 acaacctacacattcat 22460674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 33 - 251
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 132  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaac-gttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||  ||||||||||| ||||||||||||||||||||||||    
T  133 cgcacccccaatttgtcattaatgctatgtttgtttgtctcatttgaattgcaaacatttttgataaaaacactt-aaacaaacacacactactcacttc 231  T
Q  204 acaacttacactttcatttc 223  Q
    |||||| |||||||||||||    
T  232 acaactcacactttcatttc 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 167; Significance: 1e-89; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 39272 - 39493
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  39272 ccaaatgttagttttctgaaaagtttctgacgtggtctatctgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaatgtactaaca 39371  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  39372 cacgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacactt-aaacaaacacacactactcacttca 39470  T
Q  205 caacttacactttcatttcatct 227  Q
    ||||| |||||||||||||||||    
T  39471 caactcacactttcatttcatct 39493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 43141 - 43305
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  43141 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgctttttaacatacttacacgcgcccc 43240  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
     ||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||    
T  43241 taatttgtcattaatgctgtgtttgtttgtcccttctgaattgcaaacgttttaataaaaacact 43305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 2848 - 2747
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaa-cacacactactcacttcacaacttacactt 216  Q
    ||||||||| | |||||||||||| | |  ||| ||||||||||||| |||||||||| ||| |  ||| ||||| |||||||||||||||| |||||||    
T  2848 tcattaatgttgtgtttgtttgtcccctcatgacttgcaaacgtttttactaaaaacatttagacaaaatcacacgctactcacttcacaacctacactt 2749  T
Q  217 tc 218  Q
    ||    
T  2748 tc 2747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 282 - 495
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||||| |||||| ||    
T  282 ccaaaggttagttttctgaaaagtatctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttgatattaaatatactatca 381  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttca 204  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  382 cgcgcccccaatttgtcattaatgctatgtttgtttgtctgttctgaattgcaaacgttttaataaaaacacttaaaacaaacacacactactcacttca 481  T
Q  205 caacttacactttc 218  Q
    ||||  ||||||||    
T  482 caacaaacactttc 495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 38721 - 38959
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38721 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtactggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 38820  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    |||||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  38821 cgcgcccctaatttgtcattagtgctacgtttgtttgtctcatttgaattgcaaacgtttttgataaaaacactt-aaacaaacacacactactcacttc 38919  T
Q  204 acaacttacactttcatttcatctt--aaccttctctgcta 242  Q
    |||||| ||||| |||||||| |||  ||||||||||||||    
T  38920 acaactcacactctcatttca-cttcaaaccttctctgcta 38959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 35594 - 35389
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccc 112  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  35594 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttattcgctttttaacatacttacacgcgcccc 35495  T
Q  113 caatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttcacaactta 211  Q
    |||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||| |||  |||  ||||||||||||||||||||||  |    
T  35494 caatttgtcattaatgctgtgtttgtttgtcccttctgaattacaaacgttttaataaaaacac-taagtcaattcacacactactcacttcacaacaaa 35396  T
Q  212 cactttc 218  Q
    |||||||    
T  35395 cactttc 35389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 149 - 360
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  149 ccaaaggttatttttctgaaaagtttctgacgttgtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacgtactaaca 248  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  249 cgcgcccccattttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttgataaatacacttaagcaaaaacacacactactcacttc 348  T
Q  204 acaacttacact 215  Q
    |||||| |||||    
T  349 acaactcacact 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 2802 - 2998
Alignment:
Q  23 aaaagtttctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttc 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  2802 aaaagtttctgacgtggtctatttgtattggagtataacaaaaaagggcaatgatgttttatatgcttttaaacatactaacacgcgcccccaatttgtc 2901  T
Q  122 attaatgctatgtttgtttgtctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2902 tttaatgctatgtttgtttgtctcttttgaattgcaaacgtttttactaaaaacactt-aaacaaacacacactactcacttcacaactcacactttc 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 73 - 278
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  73 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatctgcttttaaacgtactaaca 172  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  173 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcgaacgttttgataaatacacttaagcaaaaacacacactactcacttc 272  T
Q  204 acaact 209  Q
    ||||||    
T  273 acaact 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 8328 - 8533
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  8328 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatctgcttttaaacgtactaaca 8427  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaa-aacaaacacacactactcacttc 203  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||  | ||||||||||||||||||||    
T  8428 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcgaacgttttgataaatacacttaagcaaaaacacacactactcacttc 8527  T
Q  204 acaact 209  Q
    ||||||    
T  8528 acaact 8533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 18627 - 18425
Alignment:
Q  40 tctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatgctatgtttgtt 139  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  18627 tctatttgtattggagtataacaaaaagggcaatgatgttttatatgcttttaaacgtactaacacgcgcccccaatttgtcattaatgctatgtttgtt 18528  T
Q  140 tgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcatttcatct-taaccttctct 238  Q
    ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  18527 tgtatcttttgaattgcaaacgttttactaaaaacagtt-aaacaaacacacactactcatttcacaactcacactttcatttcatctccaaccttctct 18429  T
Q  239 gcta 242  Q
    ||||    
T  18428 gcta 18425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 6822 - 6603
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6822 ccaaagggtagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaatgtactaaca 6723  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacacttaaaacaa-acacacactactcactt 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||  |||  ||||||||||||||||    
T  6722 cgcgcccccaatttgtcattaatgctatgtttgtttgtctcttttgaattgcaaacggtttacttaaaaacac-taagtcaattcacacactactcactt 6624  T
Q  203 cacaacttacactttcatttc 223  Q
    ||||||  |||||||||||||    
T  6623 cacaacaaacactttcatttc 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 5171 - 5371
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5171 ccaaaggttaattttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 5270  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaac-----gttttactaaaaacactta-aaacaaacacacactactc 198  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||     |||||| |||||||||||| |||||||||||||||||||    
T  5271 cgcgcccccaatatgtcattaatgctatgtttgtttgtctcttttgaattgcaaacattttgtttta-taaaaacacttataaacaaacacacactactc 5369  T
Q  199 ac 200  Q
    ||    
T  5370 ac 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 31352 - 31149
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaaca 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  31352 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgttttacttggttttaaacatactaaca 31253  T
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactcacttc 203  Q
    ||||||| |||||| ||||||||||||||||||||| | | || |||||||||||||||||| | ||||||||||||||||  |||||||||||||||||    
T  31252 cgcgccctcaatttgtcattaatgctatgtttgtttttttgttctgaattgcaaacgttttaattaaaacacttaaaacaattcacacactactcacttc 31153  T
Q  204 acaa 207  Q
    ||||    
T  31152 acaa 31149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 179936 - 179717
Alignment:
Q  23 aaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttca 122  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||    
T  179936 aaaagtttctgacgtggtctatttgtattggagtataacaaaaaggacaatgatgatttatatgcttttaaacatactaacacgcgcccccaatttgtca 179837  T
Q  123 ttaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcat 220  Q
    |||||||| ||||||||||| | ||||||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  179836 ttaatgctctgtttgtttgtccccttttgaattgcaaacgtttttagtaaaaacactt-agacaaacacacactactcacttcacaactcacactttcat 179738  T
Q  221 ttcatct-taaccttctctgc 240  Q
    ||| |||  ||||||||||||    
T  179737 ttcttctccaaccttctctgc 179717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 49648 - 49776
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttt-tatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||  |||||||||| ||||  |||| |||||||| || || |||||     
T  49648 tctgacgtggtctatttgtattggtgtataactaaaagggcaatgatgtttctataagcttttaaacgtactctcacgtgcccccaa-ttgtctttaatt 49746  T
Q  129 ctatgtttgtttgtctcttttgaattgcaa 158  Q
     | |||||||||||||| | ||||||||||    
T  49747 ttgtgtttgtttgtctcctctgaattgcaa 49776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 6034 - 6236
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  6034 tctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgcttttaaacgtactaacacacgcccccaattt 6133  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     ||||||||||| ||||||||||| | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6134 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgtttttactaaaaacactt-aaacaaacacacactactcacttcacaactcacactt 6232  T
Q  217 tcat 220  Q
    ||||    
T  6233 tcat 6236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 220763 - 220565
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  220763 tctgaaaaatctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgatttatatgcttttaaacgtactaacacgcgcccccaattt 220664  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
     ||||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  220663 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgttttactaaaaacactt-agacaaacacacactactcacttcacaacatacacttt 220565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 49328 - 49544
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaa----agggcaatgatgttttatttgcttttaaacatact 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||    |||||||||||||||||||||||||||||||||||    
T  49328 ccaaaggttagttttctgaaaagtctctgacgtggtctatttgtattggactataacaaaaaaaaagggcaatgatgttttatttgcttttaaacatact 49427  T
Q  101 aacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacacttaaaacaa-acacacactactca 199  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||  |||  |||||||||||||    
T  49428 aacacgcccccccaatttgtcattaatgctatgtttgtttgtcccttctgaattgcaaacgttttaccaaaaacac-taagtcaattcacacactactca 49526  T
Q  200 cttcacaacttacacttt 217  Q
    |||||||||  |||||||    
T  49527 cttcacaacaaacacttt 49544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 62987 - 62782
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||||||| |||| ||||||||||||||||    
T  62987 tctgaaaagtttctgacgtggtctatttgtattggagaataacaaaaagggcaatgatgattttttatgcttttaaacgtacttacacgcgcccccaatt 62888  T
Q  118 tttcattaatgctatgtttgtttg-tctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||||||||||| ||||  | ||| |||||||||| ||||||||| |||||||||  |  ||||||||||||||||||||||||| |||||||    
T  62887 tgtcattaatgctatgtttatttgcccccttatgaattgcaatcgttttacttaaaacactttgacaaaacacacactactcacttcacaacctacactt 62788  T
Q  217 tcattt 222  Q
    ||||||    
T  62787 tcattt 62782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 69226 - 69426
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||    
T  69226 tctgaaaagtttctgacgtggtctatttgtattggagtataaaaaaaagggcaatgatgacttatatgcttttaaacgtactaacacgcgcccccaattt 69325  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
     |||||||| || ||||||||||| | |||||||||||||| || ||||||||||||| ||| | |||||||||||||||||||||| ||||| ||||||    
T  69326 gtcattaatcctttgtttgtttgtccccttttgaattgcaatcgtttttactaaaaactctt-agacaaacacacactactcacttcgcaactcacactt 69424  T
Q  217 tc 218  Q
    ||    
T  69425 tc 69426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 30498 - 30302
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaattt 118  Q
    |||||||| | |||||||||||||||  | |||||||||||||||||||||||||||||   ||| ||||||||||| ||||||||||||||||||||||    
T  30498 tctgaaaaatctctgacgtggtctatgtggattggagtataacaaaaagggcaatgatgaaatatatgcttttaaacgtactaacacgcgcccccaattt 30399  T
Q  119 ttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
     ||||||||||| ||||||||||| | |||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||    
T  30398 gtcattaatgctttgtttgtttgtccccttttgaattgcaatcgttttactaaagacactt-agacaaacacacactactcacttcacaacatacact 30302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 55112 - 55317
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| | ||||||||||| |||| ||||||||||| ||||    
T  55112 tctgaaaagtttctgacgtggtctatatgtattggagtataacaaaaagggcaatgatgattttttatgcttttaaacgtacttacacgcgcccctaatt 55211  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||  |  | |||||| |||||||||||||||| |||||||    
T  55212 tgtcattaatgctatgtttgtttgtccccttatgaattgcaatcgttttacttaaaacactttgacaatacacaccctactcacttcacaacctacactt 55311  T
Q  217 tcattt 222  Q
    ||||||    
T  55312 tcattt 55317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 397 - 602
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||   || ||||||||||||||||    
T  397 tctgaaaagtttctgacgtggtctattcgtattggagtataacaaaaagggcaatgatgattttatatgcttttaaactagcttacacgcgcccccaatt 496  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||| | ||||||||||| | ||| |||||||||| ||||||||| |||||||||  |  | |||||||||||||||||||||||  ||||||    
T  497 tgtcattaatgttgtgtttgtttgtccccttgtgaattgcaatcgttttacttaaaacactttgacaatacacacactactcacttcacaaccaacactt 596  T
Q  217 tcattt 222  Q
    ||||||    
T  597 tcattt 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 5772 - 5977
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| |||||||||||||||| |||||||||||| || |||||||||||||||  |||||  ||||||||||||||| ||| ||||||||||||    
T  5772 tctgaaaagtctctgacgtggtctatttgtattggagtattactaaaagggcaatgatgaatttataagcttttaaacatacttacatgcgcccccaatt 5871  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    | ||||||||||||||||||||||| | ||| || || |||||||||||||| |||||||||  |  ||||||||||||||||||||||||| |||||||    
T  5872 tgtcattaatgctatgtttgtttgtccccttatggatcgcaaacgttttacttaaaacactttgacaaaacacacactactcacttcacaacctacactt 5971  T
Q  217 tcattt 222  Q
    ||||||    
T  5972 tcattt 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 6415 - 6210
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| | |||||||||||||| |||||||||||| || |||||||||||||||  |||||  |||||||||| |||| ||||||||||||||||    
T  6415 tctgaaaagtctatgacgtggtctatttgtattggagtattactaaaagggcaatgatgaatttataagcttttaaacgtacttacacgcgcccccaatt 6316  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    ||| ||||||||||||||||||||| | ||| || || |||||||||||||| |||||||||  |  ||||||||||||||||||||||||| |||||||    
T  6315 ttttattaatgctatgtttgtttgtccccttatggatcgcaaacgttttacttaaaacactttgacaaaacacacactactcacttcacaacctacactt 6216  T
Q  217 tcattt 222  Q
    ||||||    
T  6215 tcattt 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 11021 - 10835
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataac-aaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||    
T  11021 tctgaaaagtctctgacgtggtctatttgtattggagtataactaaaaagggcaatgatgatttatatgcttttaaacgtactaacacgcgcccacaatt 10922  T
Q  118 tttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttc 203  Q
    | ||||||||||||||||||||| | | ||| |||||||||| || |||||||||| |||||| | ||||||||||||||||||||||    
T  10921 tgtcattaatgctatgtttgtttatccccttatgaattgcaatcgtttttactaaatacactt-agacaaacacacactactcacttc 10835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 132136 - 131946
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataac-aaaaagggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||| | |||||||||||||||| ||||||||||||||| ||||||||  |||||||||||| ||||||||||| |||| ||||||||||||||      
T  132136 tctgaaaaatctctgacgtggtctatttgtattggagtataacgaaaaagggtcatgatgttttatatgcttttaaacgtacttacacgcgcccccaa-c 132038  T
Q  118 tttcattaatgctatgtttgtttgtct-cttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaac 208  Q
    | ||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||    
T  132037 tgtcattaatgctatgtttgtttgtctccttatgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcacttcacaac 131946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 575 - 712
Alignment:
Q  21 tgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttt 119  Q
    |||||| | |||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||  |||||||||| ||||  ||||||||||| | ||     
T  575 tgaaaaatctctgacgtggtctatttgtattggagtataactaaaagggaaatgatgtttttataagcttttaaacgtactttcacgcgcccccca-ttg 673  T
Q  120 tcattaatgctatgtttgtttgtctcttttgaattgcaa 158  Q
    || |||||||| |||||||||||||| | ||||||||||    
T  674 tctttaatgctgtgtttgtttgtctcctctgaattgcaa 712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 43354 - 43519
Alignment:
Q  13 tagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgccc 111  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||  || |||| ||||||||||    
T  43354 tagttttctgaagagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttgacgtacttacacgcgccc 43453  T
Q  112 ccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact 177  Q
    ||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||||||    
T  43454 ccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaacact 43519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 74046 - 73839
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||| ||  ||||  |||||||||| ||||    
T  74046 tctgaaaagtctctgacgtggtgtatttgtattggagtataacaaaaagggcaatgatgactttatatgcttttcaatgtactttcacgcgcccctaatt 73947  T
Q  118 tttcattaatgctatgtttgtttgt---ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttaca 213  Q
    | |||||||||||||||||||||||   ||||| |||||||||| || |||||| |||||||||||||   ||||||||||||||||||||||||| |||    
T  73946 tgtcattaatgctatgtttgtttgtcccctcttctgaattgcaatcgtttttacaaaaaacacttaaa--caacacacactactcacttcacaactcaca 73849  T
Q  214 ctttcatttc 223  Q
    ||||| ||||    
T  73848 ctttcttttc 73839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1078 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1078
Description:

Target: scaffold1078; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 169 - 357
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||  |||||||||  |||| ||||||||||||||||| ||||||||     
T  169 tctgacgtggtctatttgtattggtgtataactaaaagggcaatgatgattttataagcttttaaatgtacttacacgcgcccccaatttgtcattaata 268  T
Q  129 ctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    || |||||||||||| | || ||||||||||| |||||||| |||||||||  |  ||||||||||||||||||||||||| |||||||    
T  269 ctgtgtttgtttgtccccttctgaattgcaaatgttttactcaaaacactttgacaaaacacacactactcacttcacaacctacactt 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 6489 - 6287
Alignment:
Q  21 tgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttt 119  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||||||||  ||||| ||||||||||  ||||  ||||||||||||||||     
T  6489 tgaaaagtctctgacgtggtgtacttgtattggagtataacaaaaagggcaatgatgactttatatgcttttaaatgtactttcacgcgcccccaatttg 6390  T
Q  120 tcattaatgctatgtttgtttgtctc--ttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactt 216  Q
    ||||||||||||| |||| ||||| |  || |||||||||| || ||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||    
T  6389 tcattaatgctatctttgcttgtcccctttctgaattgcaaccgtttttactaaaaacactt-agacaaacacacactactcacttcataactcacactt 6291  T
Q  217 tcat 220  Q
    ||||    
T  6290 tcat 6287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 109370 - 109230
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatt 117  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||  |||||||||||||||    
T  109370 tctgaaaagtctctgacgtggtctatttgtattggagtataacaaaaagggcaatgatgtttttattcgctttttaacatactttcacgcgcccccaatt 109271  T
Q  118 tttcattaatgctatgtttgtttgtctcttttgaattgcaa 158  Q
    | ||||||||||| |||||||||||||| | ||||||||||    
T  109270 tgtcattaatgctgtgtttgtttgtctcctctgaattgcaa 109230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 240
Target Start/End: Original strand, 1471 - 1626
Alignment:
Q  86 gcttttaaacatactaacacgcgcccccaatttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacgttttactaaaaacacttaaaaca 184  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||  |  |    
T  1471 gcttttaaacttacttacacgcgcccccaatttgtcattaatgctatgtttgtttgtccccttttgaattgcaatcgttttacttaaaacactttgacaa 1570  T
Q  185 aacacacactactcacttcacaacttacactttcatttcatcttaaccttctctgc 240  Q
     ||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||||    
T  1571 tacacacactactcacttcacaacctacactttcattttctctaaactttctctgc 1626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 8657 - 8825
Alignment:
Q  7 aaaggttagttttctgaaaa-gtttctgacgtggtcta-ttagta-ttggagtataa--caaaaagggcaatgatgttttatttgcttttaaacat-act 100  Q
    |||||||||||||||||||| ||||||||||||||||| || ||| | |||||||||   |||||||||||||||||||||||||||||||||||| |||    
T  8657 aaaggttagttttctgaaaaagtttctgacgtggtctagtttgtactgggagtataaacaaaaaagggcaatgatgttttatttgcttttaaacataact 8756  T
Q  101 aacacgcgcccccaa--tttttcattaatgct-atgtttgtttgtctc-ttttgaattgcaaacgtttt 165  Q
    ||||||| |||||||  || |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  8757 aacacgcccccccaactttgttcattaatgctaatgtttgtttgtctcaatttgaattgcaaacgtttt 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 10345 - 10390
Alignment:
Q  179 aaaacaaacacacactactcacttcacaacttacactttcatttca 224  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  10345 aaaacaaacacacactactcacttcacaactcacactctcatttca 10390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1362 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1362
Description:

Target: scaffold1362; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 1 - 94
Alignment:
Q  148 ttgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttcatttcatcttaaccttctctgcta 242  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1 ttgaattgcaaacgttttgataaaaacacttaaa-caaacacacacaactcacttcacaactcacactttcatttcatcttaaccttctctgcta 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 195482 - 195413
Alignment:
Q  5 ccaaaggttagttttctgaaaagtttctgacgtggtctattagtattggagtataacaaaaagggcaatg 74  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  195482 ccaaaggttagttttctgaaaagtttctgacgtggtctatttgtattggagtataacaaaaagggcaatg 195413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 2456 - 2633
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaa-aaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||||||||||||| ||||||| |||||||   ||||||||||||||  |||||  |||||||||| ||||  |||||||||||||||| ||||||||    
T  2456 tctgacgtggtctatttgtattggtgtataacttgaaagggcaatgatgactttataagcttttaaacgtactttcacgcgcccccaatttgtcattaat 2555  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgttttac-taaaaacact---taaaacaaacacacactactcact 201  Q
    |||||||||||||||||| | ||||||| || |||||| | | ||||||||   |||| ||||||||||| |||||||    
T  2556 gctatgtttgtttgtctcctctgaattgtaatcgtttttcatcaaaacactatataaaccaaacacacacaactcact 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 1 - 114
Alignment:
Q  105 cgcgcccccaatttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcactt 202  Q
    |||||||||||||| ||||||||||||||||||||||| | ||| |||||||||| || ||||||||||||||||| | |||||||||||||||||||||    
T  1 cgcgcccccaatttgtcattaatgctatgtttgtttgtccccttatgaattgcaatcgtttttactaaaaacactt-agacaaacacacactactcactt 99  T
Q  203 cacaacttacacttt 217  Q
    ||||||  |||||||    
T  100 cacaaccaacacttt 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 162063 - 162192
Alignment:
Q  89 tttaaacatactaacacgcgcccccaatttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaac-gttttactaaaaacacttaaaacaaa 186  Q
    ||||||||||||  |||||||||| ||||| ||||||||||| ||||||||||| | ||| ||||||||||||  |||||||||||||||||| |  |||    
T  162063 tttaaacatactttcacgcgccccaaatttgtcattaatgctgtgtttgtttgtccccttctgaattgcaaacatttttactaaaaacacttagacaaaa 162162  T
Q  187 cacacactactcacttcacaacttacactt 216  Q
    ||||||| |||||||||||||| |||||||    
T  162163 cacacaccactcacttcacaacctacactt 162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 6293 - 6439
Alignment:
Q  19 tctgaaaagtttctgacgtggtctattagtattggagtataaca-aaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaat 116  Q
    |||||||||  ||||||||||||| || ||||||| |||||||  ||||||||||||||| ||||||  ||||| |||| ||||  |||||||||||| |    
T  6293 tctgaaaaggctctgacgtggtctgtttgtattggtgtataacttaaaagggcaatgatgattttataagcttt-aaacgtactttcacgcgcccccagt 6391  T
Q  117 ttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    | | |||||||||| |||||||||||| |||||||||||||||||||||    
T  6392 tgt-cattaatgctgtgtttgtttgtcccttttgaattgcaaacgtttt 6439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 21100 - 20966
Alignment:
Q  32 tgacgtggtctattagtattggagtataaca-aaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaatgc 129  Q
    ||||||||||  || ||||||| |||||||| |||||||||||||||  |||||  |||||||||| ||||  ||||||||||||||| | ||||||||     
T  21100 tgacgtggtccgtttgtattggtgtataacataaaagggcaatgatgactttataagcttttaaacgtactttcacgcgcccccaattgt-cattaatgt 21002  T
Q  130 tatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    | |||||||||||||| |||||||||||||||||||    
T  21001 tgtgtttgtttgtctcctttgaattgcaaacgtttt 20966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 1940 - 1836
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||| | |||||||||||| | || |||||||||| |||||||||||||||||||| |  || |||||||||||||||||| ||| |||||||||    
T  1940 tcattaatgttgtgtttgtttgtccccttctgaattgcaatcgttttactaaaaacacttagacaaatcacacactactcacttcataacatacactttc 1841  T
Q  219 atttc 223  Q
    |||||    
T  1840 atttc 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 3291 - 3174
Alignment:
Q  103 cacgcgcccccaatttttcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcact 201  Q
    ||||| ||||||||| | |||||||| | |||||||||||| | || |||||||||||||||||||| |||||||||| |  ||||||||| ||||||||    
T  3291 cacgcacccccaattgt-cattaatgttgtgtttgtttgtccccttctgaattgcaaacgttttacttaaaacacttagacaaaacacacattactcact 3193  T
Q  202 tcacaacttacactttcat 220  Q
    ||||||| ||||| |||||    
T  3192 tcacaacctacacattcat 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 24838 - 24723
Alignment:
Q  90 ttaaacatactaacacgcgcccccaatttt-tcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaacact---taaaacaa 185  Q
    |||||| ||||  ||||||||||||| ||| ||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||   || | |||    
T  24838 ttaaacgtactttcacgcgcccccaaatttgtcattaatgctgtgtttgtttgtctcctctgaattgcaaacgttttacttaaaacactatatataccaa 24739  T
Q  186 acacacactactcact 201  Q
    |||||||| |||||||    
T  24738 acacacacaactcact 24723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 8301 - 8401
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||||| |||||||||||| | || ||||||||||||||||| ||| |||||||||| |  || |||||||||||||||||||||| ||||||||    
T  8301 tcattaatgctgtgtttgtttgtccccttctgaattgcaaacgtttttactcaaaacacttagataaatcacacactactcacttcacaacctacacttt 8400  T
Q  218 c 218  Q
    |    
T  8401 c 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 2539 - 2439
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacacttt 217  Q
    ||||||||| | |||||||||||| | || |||||||||||||||||  || |||||||||| |  || ||||| |||||||||||||||| ||||||||    
T  2539 tcattaatgttgtgtttgtttgtccccttctgaattgcaaacgttttttctcaaaacacttagacaaatcacacgctactcacttcacaacctacacttt 2440  T
Q  218 c 218  Q
    |    
T  2439 c 2439  T

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Target: scaffold0056 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 30679 - 30791
Alignment:
Q  106 gcgcccccaatttttcattaatgctatgtttgtttgtctc--ttttgaattgcaaacg-ttttactaaaaacacttaaaacaaacacacactactcactt 202  Q
    ||||||||||||| ||||||||| | |||||||||||| |  || ||||||||||||| ||||||| |||||||||  |  ||||||||||||||||| |    
T  30679 gcgcccccaatttgtcattaatgttgtgtttgtttgtcccctttctgaattgcaaacgtttttactcaaaacactttgacaaaacacacactactcacct 30778  T
Q  203 cacaacttacact 215  Q
    |||||| ||||||    
T  30779 cacaacctacact 30791  T

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Target: scaffold0454 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 5693 - 5617
Alignment:
Q  97 tactaacacgcgcccccaatttttcattaatgctatgtttgtttgtctcttttgaattgcaaacgttttactaaaaa 173  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||| | | |||||| ||||||||||| ||||||    
T  5693 tacttacacgcgcccccaatttgtcattaatgctgtgtttgtttgtcccctctgaattacaaacgttttaataaaaa 5617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 586 - 487
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||| | |||||||||||| | || |||||||||||| ||||||| |||||||||| |  || |||||||||| ||||||||||| |||||||||    
T  586 tcattaatgttgtgtttgtttgtccccttctgaattgcaaacattttactcaaaacacttagacaaatcacacactacgcacttcacaacctacactttc 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 161378 - 161555
Alignment:
Q  30 tctgacgtggtctattagtattggagtataaca-aaaagggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    ||||||||| |||||| ||||||| |||||||  |||||||||||||||  |||||  |||||||||  || |  ||| |||||| ||||| ||||||||    
T  161378 tctgacgtgctctatttgtattggtgtataacttaaaagggcaatgatgactttataagcttttaaatgtattttcacacgcccctaatttgtcattaat 161477  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgttttacta-aaaacact---taaaacaaacacacactactcact 201  Q
    ||  |||||||||||||| | |||||||||| ||||||  |  ||||||||   |||| |||||||||||||||||||    
T  161478 gcagtgtttgtttgtctcctctgaattgcaatcgtttttttttaaaacactatataaaccaaacacacactactcact 161555  T

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Target: scaffold1365 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1365
Description:

Target: scaffold1365; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 1075 - 1173
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaa-cacacactactcacttcacaacttacact 215  Q
    ||||||||| | |||||||||||| | || ||||||||||||||||| |||||||||||||| |  ||| |||||||||||||||||||||| ||||||    
T  1075 tcattaatgttgtgtttgtttgtccccttctgaattgcaaacgtttttactaaaaacacttagacaaaatcacacactactcacttcacaacctacact 1173  T

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Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 7161 - 7073
Alignment:
Q  132 tgtttgtttgtctcttt-tgaattgcaaacgtttta-ctaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    |||||||||||| | || |||||||||| ||||||  || |||||||||| || ||||||||||||||||||||||||| |||||||||    
T  7161 tgtttgtttgtccccttctgaattgcaatcgtttttgctcaaaacacttagaaaaaacacacactactcacttcacaacctacactttc 7073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 13552 - 13417
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaagggcaatgatg-ttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||  ||||||| ||||||| ||||||| ||||||| ||||||  |||||||||  |||   |||| |||||| | || |||||||||    
T  13552 tctgacgtggtctatctgtattggtgtataactaaaagggaaatgatgattttataagcttttaaatgtacgttcacgtgcccccga-ttgtcattaatg 13454  T
Q  129 ctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
     | |||||||||||||| | |||||||||| ||||||    
T  13453 ttgtgtttgtttgtctcctctgaattgcaatcgtttt 13417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 372 - 471
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttactaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||||| |||||||||||| | || ||||||||||| |||||||| |||||||||  |  || ||||||| ||||||||||| || |||||||||    
T  372 tcattaatgctgtgtttgtttgtccccttctgaattgcaaatgttttactcaaaacacttggacaaatcacacacaactcacttcactacctacactttc 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11090 - 10999
Alignment:
Q  132 tgtttgtttgtctcttt-tgaattgcaaacgtttt-actaaaaacacttaaaacaaa-cacacactactcacttcacaacttacactttcat 220  Q
    |||||||||||| | || |||||||||| |||||| ||| ||||||||||| ||||| |||||||||||||| ||||||| |||||||||||    
T  11090 tgtttgtttgtccccttctgaattgcaatcgtttttactcaaaacacttaagacaaaacacacactactcacctcacaacctacactttcat 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 11395 - 11501
Alignment:
Q  103 cacgcgcccccaatttttcattaatgctatgtttgtttgt-ctcttttgaattgcaaac-gttttactaaaaacacttaaaacaaacacacactactcac 200  Q
    |||||||||| ||||| ||||||||| | ||||||||||| | ||||||||||||||||  ||||||| |||||||||     ||||||||||||||| |    
T  11395 cacgcgcccctaatttgtcattaatgatgtgtttgtttgtccccttttgaattgcaaacatttttactcaaaacactttggcaaaacacacactactcgc 11494  T
Q  201 ttcacaa 207  Q
    |||||||    
T  11495 ttcacaa 11501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 42198 - 42094
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttt-tgaattgcaaacgttttacta---aaaacacttaaaacaaacacacactactcacttcacaacttacact 215  Q
    ||||||||| | ||||||||| || | || |||||||||||||||||||||   |||||||||| |  || |||||||||||||||| ||||| ||||||    
T  42198 tcattaatgttgtgtttgtttttccccttctgaattgcaaacgttttactattcaaaacacttagacaaatcacacactactcacttaacaacctacact 42099  T
Q  216 ttcat 220  Q
    |||||    
T  42098 ttcat 42094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 3545 - 3643
Alignment:
Q  120 tcattaatgctatgtttgtttgtctcttttgaattgcaaacgtttt-actaaaaacacttaaaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||| | |||||||| ||| ||| | ||||||||||||||| ||| |||||||||| |  |  |||||||||||||||||||||| |||||||||    
T  3545 tcattaatgttgtgtttgtt-gtcccttctaaattgcaaacgtttttactcaaaacacttacacaattcacacactactcacttcacaacctacactttc 3643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 20948 - 21084
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||||||| ||||| ||||||| |||| ||   | ||||||||||||  |||||  |||||||||  ||||| ||||||||||||| | | ||||| |    
T  20948 tctgacgtggcctatttgtattggtgtatgactttagagggcaatgatgagtttataagcttttaaatgtactatcacgcgcccccaactgt-cattagt 21046  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    ||| |||||||||||||| | ||||||| |||||||||    
T  21047 gctgtgtttgtttgtctcctctgaattgtaaacgtttt 21084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 34149 - 34285
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaa-agggcaatgatgt-tttatttgcttttaaacatactaacacgcgcccccaatttttcattaat 127  Q
    |||||||||| ||||| ||||||| |||| ||   | ||||||||||||  |||||  |||||||||  ||||| ||||||||||||| | | ||||| |    
T  34149 tctgacgtggcctatttgtattggtgtatgactttagagggcaatgatgagtttataagcttttaaatgtactatcacgcgcccccaactgt-cattagt 34247  T
Q  128 gctatgtttgtttgtctcttttgaattgcaaacgtttt 165  Q
    ||| |||||||||||||| | ||||||| |||||||||    
T  34248 gctgtgtttgtttgtctcctctgaattgtaaacgtttt 34285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 11444 - 11396
Alignment:
Q  30 tctgacgtggtctattagtattggagtataac-aaaaagggcaatgatg 77  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  11444 tctgacgtggtctatttgtattggtgtataactaaaaagggcaatgatg 11396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 13565 - 13420
Alignment:
Q  30 tctgacgtggtctattagtattggagtataacaaaaa-gggcaatgatgttttatttgcttttaaacatactaacacgcgcccccaatttttcattaatg 128  Q
    |||||||||||||||| ||||||| |||| ||   |  ||||||||||| ||| |||||||| || | ||||| ||||| ||||||||| | || |||||    
T  13565 tctgacgtggtctatttgtattggtgtatgactttagtgggcaatgatgattt-tttgctttgaa-cgtactatcacgcccccccaattgt-caataatg 13469  T
Q  129 ctatgtttgtttgtct-cttttgaattgcaaacgttttactaaaaacac 176  Q
     | ||||||||||||  ||| |||||||||||||||||||| |||||||    
T  13468 ttgtgtttgtttgtccacttctgaattgcaaacgttttactcaaaacac 13420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 13425 - 13389
Alignment:
Q  184 aaacacacactactcacttcacaacttacactttcat 220  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  13425 aaacacacactactcacttcacaacctaccctttcat 13389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 13580 - 13683
Alignment:
Q  120 tcattaatgctatgtttgtttgtctctttt--gaattgcaaacgttttacta---aaaacacttaaaacaaacacacactactcacttcacaacttacac 214  Q
    ||||||||| | |||||||||||| | |||  ||||||||| ||||||||||   |||||||||| |  || |||||||||||||||| ||||| ||||     
T  13580 tcattaatgttgtgtttgtttgtcccctttctgaattgcaatcgttttactactcaaaacacttagacaaatcacacactactcacttaacaacctacaa 13679  T
Q  215 tttc 218  Q
    ||||    
T  13680 tttc 13683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 2719 - 2685
Alignment:
Q  184 aaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||||||||||||||||||| |||||||||    
T  2719 aaacacacactactcacttcacaacatacactttc 2685  T

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Target: scaffold2124 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2124
Description:

Target: scaffold2124; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 597 - 536
Alignment:
Q  120 tcattaatgctatgtttgtttgt-ctcttttgaattgcaaac-gttttactaaaaacactta 179  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||  ||||||||||||||||||    
T  597 tcattaatgttatgtttgtttgtccccttctgaattgcaaacttttttactaaaaacactta 536  T

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Target: scaffold0324 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 11868 - 11809
Alignment:
Q  162 ttttactaaaaacactta---aaacaaacacacactactcacttcacaacttacactttc 218  Q
    ||||||||||||||||||   ||| | ||||||||||||||| ||||||| |||||||||    
T  11868 ttttactaaaaacacttagacaaaaacacacacactactcacatcacaacctacactttc 11809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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