View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7326_high_14 (Length: 214)
Name: NF7326_high_14
Description: NF7326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7326_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 15997893 - 15998084
Alignment:
| Q |
1 |
ttatgatttgaactcaaacaggactacaagaaaattgcagcaaactgaataaaataaatctactaactataagaaataatgaattccagagtaaagacaa |
100 |
Q |
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||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
15997893 |
ttatgatttgaactcaaacaggactaccagaaaattgcagtaaactgaataaaataaatctactaactataagaaataatgaattacagagtaaagacaa |
15997992 |
T |
|
| Q |
101 |
tcatgtcattatttgaaacactaaaaacgaccactgcatgataaattcttttaaagttgatatagcagatcaagaatacaatgggaagaaag |
192 |
Q |
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||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15997993 |
tcatgtcattatttgaaacgccaaaaacgaccactgcatgataaattcttttaaagttgatatagcagatcaagaatacaatgggaagaaag |
15998084 |
T |
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