View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7326_low_6 (Length: 391)
Name: NF7326_low_6
Description: NF7326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7326_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 39535975 - 39536346
Alignment:
| Q |
18 |
cacaggttatagatgaatgcatggaggagacatataccttagatgatgacgaaactgcatatagttttataggtttgtttatagtttcactaaattatta |
117 |
Q |
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| T |
39535975 |
cacaggttatagatgaatgcatggaggagacatataccttagatgatgacgaaactgcatatagttttataggtttgtttatagtttcactaaattatta |
39536074 |
T |
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| Q |
118 |
ttatgcaagtcatgttcatccttttgtcaactccttctgttggagttgtcgtggaaatgaaattaattttatctatttggtggttcattcctacaattgc |
217 |
Q |
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| T |
39536075 |
ttatgcaagtcatgttcatccttttgtcaactccttctgttggagttgttgtggaaatgaaattaattttatctatttggtggttcattcctacaattgc |
39536174 |
T |
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| Q |
218 |
t-----agttgacagaatgacaaaaatgaatgatgttttttatttggagtattttttgattgataattggcctttcatgggagagtaacataacttagat |
312 |
Q |
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| T |
39536175 |
tagttgagttgacagaatgacaaaaatgaatgatgttttttatttggagtattttttgattgataattggcctttcatgggagagtaaaataacttagat |
39536274 |
T |
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| Q |
313 |
ttatacttgaatattgagaaagctacatgtttaagagatggaagggtttcatttgtaaagcttaaacacgaaa |
385 |
Q |
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| T |
39536275 |
ttatacttgaatattgagaaagctacatgtttaagagatgtaagggtttcatttgt-aagcttaaacatgaaa |
39536346 |
T |
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