View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7328_high_3 (Length: 293)

Name: NF7328_high_3
Description: NF7328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7328_high_3
NF7328_high_3
[»] chr8 (46 HSPs)
chr8 (46-224)||(32759370-32759548)
chr8 (45-224)||(16384614-16384793)
chr8 (45-224)||(34901324-34901503)
chr8 (45-225)||(22201279-22201459)
chr8 (45-227)||(13422202-13422384)
chr8 (45-224)||(28876507-28876687)
chr8 (45-227)||(12580495-12580677)
chr8 (18-224)||(43771619-43771825)
chr8 (101-224)||(6028484-6028607)
chr8 (101-224)||(32877434-32877557)
chr8 (101-223)||(2872908-2873030)
chr8 (101-224)||(36483432-36483555)
chr8 (101-224)||(4245937-4246060)
chr8 (101-223)||(25022123-25022245)
chr8 (101-225)||(45217218-45217342)
chr8 (45-219)||(19947939-19948112)
chr8 (104-225)||(37372255-37372376)
chr8 (101-226)||(37668577-37668702)
chr8 (102-214)||(32424928-32425040)
chr8 (69-221)||(32638832-32638974)
chr8 (102-216)||(5818310-5818424)
chr8 (102-223)||(27886188-27886309)
chr8 (102-223)||(27944846-27944967)
chr8 (139-223)||(19436272-19436356)
chr8 (139-223)||(19572421-19572505)
chr8 (101-224)||(29355620-29355743)
chr8 (101-224)||(38388664-38388787)
chr8 (101-227)||(12357883-12357998)
chr8 (101-227)||(12359011-12359126)
chr8 (102-221)||(23265649-23265768)
chr8 (104-224)||(5539433-5539541)
chr8 (150-223)||(40412433-40412506)
chr8 (101-221)||(27968103-27968225)
chr8 (101-221)||(28025089-28025211)
chr8 (101-172)||(42949179-42949250)
chr8 (134-224)||(32678-32768)
chr8 (150-221)||(7411636-7411707)
chr8 (101-215)||(20182380-20182493)
chr8 (108-204)||(30804750-30804846)
chr8 (108-223)||(3891960-3892075)
chr8 (101-226)||(17702490-17702615)
chr8 (177-221)||(28737255-28737299)
chr8 (101-211)||(10349254-10349364)
chr8 (194-223)||(41099377-41099406)
chr8 (101-153)||(24100191-24100243)
chr8 (66-127)||(40412508-40412569)
[»] chr7 (55 HSPs)
chr7 (18-226)||(27353913-27354121)
chr7 (45-224)||(48163402-48163581)
chr7 (45-223)||(11829684-11829862)
chr7 (45-226)||(40095642-40095823)
chr7 (45-224)||(34238152-34238331)
chr7 (18-223)||(27555284-27555489)
chr7 (45-224)||(38262993-38263172)
chr7 (66-224)||(25969391-25969550)
chr7 (45-224)||(16850780-16850959)
chr7 (45-224)||(26773654-26773833)
chr7 (101-221)||(34122615-34122735)
chr7 (66-210)||(9250383-9250529)
chr7 (101-221)||(1043069-1043189)
chr7 (76-213)||(26845869-26846006)
chr7 (69-223)||(42896997-42897140)
chr7 (45-224)||(47238559-47238728)
chr7 (101-225)||(39520793-39520906)
chr7 (102-227)||(27398046-27398171)
chr7 (101-223)||(19510518-19510640)
chr7 (101-223)||(33454065-33454187)
chr7 (101-223)||(44960133-44960255)
chr7 (69-216)||(36202754-36202891)
chr7 (134-223)||(4291507-4291596)
chr7 (122-223)||(23079059-23079160)
chr7 (104-224)||(11058346-11058466)
chr7 (101-224)||(21409385-21409508)
chr7 (103-221)||(35159862-35159980)
chr7 (103-223)||(38064590-38064710)
chr7 (102-220)||(18113938-18114055)
chr7 (101-204)||(23311736-23311839)
chr7 (161-227)||(16564416-16564482)
chr7 (48-227)||(16601180-16601337)
chr7 (101-177)||(8028738-8028814)
chr7 (103-224)||(24956244-24956366)
chr7 (48-146)||(16564325-16564422)
chr7 (101-221)||(1363010-1363130)
chr7 (78-224)||(554865-555001)
chr7 (101-211)||(8056332-8056438)
chr7 (68-221)||(23970091-23970244)
chr7 (150-221)||(35136056-35136127)
chr7 (101-215)||(44269729-44269842)
chr7 (161-221)||(15878402-15878462)
chr7 (161-221)||(36758054-36758114)
chr7 (161-221)||(36767578-36767638)
chr7 (101-148)||(47720170-47720217)
chr7 (103-221)||(40041376-40041494)
chr7 (134-212)||(48153620-48153698)
chr7 (101-212)||(49015068-49015175)
chr7 (101-228)||(2908237-2908364)
chr7 (101-145)||(36660551-36660595)
chr7 (104-211)||(30403903-30404010)
chr7 (110-175)||(1400282-1400347)
chr7 (122-155)||(40041510-40041543)
chr7 (103-143)||(7416689-7416729)
chr7 (101-145)||(38064738-38064782)
[»] chr2 (42 HSPs)
chr2 (45-224)||(7876711-7876890)
chr2 (45-225)||(33324814-33324994)
chr2 (45-224)||(38602264-38602443)
chr2 (45-234)||(16561787-16561976)
chr2 (45-225)||(40308839-40309019)
chr2 (45-224)||(7807316-7807495)
chr2 (102-224)||(4170501-4170623)
chr2 (45-224)||(6124170-6124349)
chr2 (45-224)||(18300969-18301148)
chr2 (101-221)||(22484267-22484387)
chr2 (101-223)||(6497647-6497769)
chr2 (104-221)||(22570937-22571054)
chr2 (68-221)||(34146180-34146333)
chr2 (66-221)||(4355325-4355480)
chr2 (101-224)||(1776434-1776557)
chr2 (101-224)||(28746650-28746773)
chr2 (102-221)||(35342317-35342436)
chr2 (101-221)||(14217152-14217272)
chr2 (101-224)||(4561785-4561908)
chr2 (101-224)||(31236184-31236307)
chr2 (101-222)||(2319274-2319395)
chr2 (68-221)||(44156597-44156751)
chr2 (78-215)||(8482892-8483029)
chr2 (68-222)||(1005512-1005665)
chr2 (101-221)||(24585530-24585649)
chr2 (102-224)||(20536772-20536884)
chr2 (104-219)||(37134299-37134414)
chr2 (102-204)||(40497384-40497486)
chr2 (101-221)||(21104482-21104602)
chr2 (64-223)||(45159270-45159418)
chr2 (113-227)||(43214566-43214682)
chr2 (101-221)||(25933565-25933685)
chr2 (101-213)||(35996651-35996763)
chr2 (104-222)||(12206024-12206142)
chr2 (120-224)||(5588104-5588208)
chr2 (168-224)||(12819298-12819354)
chr2 (103-213)||(3545581-3545691)
chr2 (157-223)||(14824146-14824212)
chr2 (104-221)||(3563851-3563957)
chr2 (150-221)||(40536242-40536313)
chr2 (122-155)||(14824274-14824307)
chr2 (45-93)||(22571066-22571114)
[»] chr3 (55 HSPs)
chr3 (45-226)||(37996753-37996934)
chr3 (45-224)||(40497327-40497506)
chr3 (45-223)||(22310703-22310881)
chr3 (101-227)||(7327706-7327832)
chr3 (101-223)||(35389748-35389870)
chr3 (46-224)||(22611327-22611495)
chr3 (45-224)||(28704724-28704903)
chr3 (69-222)||(28882644-28882797)
chr3 (101-221)||(48122825-48122945)
chr3 (45-225)||(52505775-52505954)
chr3 (102-224)||(1679697-1679819)
chr3 (45-224)||(25937006-25937184)
chr3 (70-226)||(52121175-52121331)
chr3 (105-223)||(42464909-42465027)
chr3 (69-225)||(55268982-55269134)
chr3 (101-221)||(13748445-13748565)
chr3 (68-220)||(28968511-28968663)
chr3 (45-226)||(10225104-10225274)
chr3 (64-222)||(52684200-52684358)
chr3 (78-221)||(6134357-6134500)
chr3 (102-224)||(41742071-41742193)
chr3 (104-221)||(22289722-22289839)
chr3 (101-228)||(53192491-53192608)
chr3 (102-223)||(42229672-42229793)
chr3 (101-221)||(30226420-30226540)
chr3 (68-223)||(21157694-21157849)
chr3 (104-213)||(983202-983311)
chr3 (103-223)||(2122702-2122825)
chr3 (101-221)||(7899717-7899837)
chr3 (149-223)||(19879139-19879213)
chr3 (45-226)||(1528497-1528667)
chr3 (103-224)||(30787562-30787683)
chr3 (123-223)||(29915859-29915959)
chr3 (123-223)||(29965012-29965112)
chr3 (124-224)||(38889101-38889200)
chr3 (68-224)||(45347296-45347451)
chr3 (101-179)||(33239992-33240070)
chr3 (70-224)||(2567365-2567508)
chr3 (101-228)||(3983690-3983817)
chr3 (102-181)||(45532979-45533058)
chr3 (103-224)||(25700759-25700878)
chr3 (165-222)||(19420904-19420961)
chr3 (161-221)||(47642017-47642077)
chr3 (150-213)||(13353233-13353296)
chr3 (68-172)||(19421465-19421569)
chr3 (150-210)||(47750937-47750997)
chr3 (150-221)||(19349637-19349708)
chr3 (152-223)||(21006534-21006605)
chr3 (185-224)||(33238720-33238759)
chr3 (102-212)||(20510155-20510265)
chr3 (101-211)||(39663968-39664078)
chr3 (161-211)||(49419245-49419295)
chr3 (101-211)||(5271489-5271589)
chr3 (124-179)||(45057253-45057308)
chr3 (119-224)||(13330944-13331044)
[»] chr5 (46 HSPs)
chr5 (45-224)||(32707773-32707952)
chr5 (45-224)||(39690705-39690884)
chr5 (45-221)||(33829753-33829925)
chr5 (66-226)||(30777484-30777645)
chr5 (102-224)||(1639781-1639903)
chr5 (45-223)||(32624875-32625053)
chr5 (45-221)||(41392654-41392830)
chr5 (101-225)||(9792315-9792439)
chr5 (103-221)||(30284607-30284725)
chr5 (101-224)||(10656817-10656938)
chr5 (68-224)||(26716270-26716426)
chr5 (68-224)||(26986010-26986166)
chr5 (105-223)||(30918376-30918494)
chr5 (102-219)||(11906220-11906337)
chr5 (101-223)||(1795390-1795512)
chr5 (101-224)||(32728707-32728830)
chr5 (68-219)||(26691618-26691769)
chr5 (45-226)||(26794946-26795116)
chr5 (68-219)||(26961350-26961501)
chr5 (101-224)||(12852116-12852228)
chr5 (101-220)||(17138252-17138370)
chr5 (111-223)||(22774552-22774664)
chr5 (68-223)||(5612407-5612562)
chr5 (102-212)||(14836390-14836500)
chr5 (101-226)||(3934786-3934911)
chr5 (101-220)||(42366101-42366220)
chr5 (101-227)||(21251459-21251585)
chr5 (103-211)||(15066148-15066256)
chr5 (102-224)||(5721985-5722106)
chr5 (102-224)||(6243168-6243279)
chr5 (101-187)||(5986066-5986152)
chr5 (101-223)||(34032367-34032489)
chr5 (103-210)||(12190397-12190503)
chr5 (123-212)||(41233388-41233477)
chr5 (102-186)||(3701233-3701317)
chr5 (123-223)||(35746271-35746371)
chr5 (104-193)||(1920864-1920953)
chr5 (101-182)||(9653804-9653885)
chr5 (101-223)||(19102463-19102585)
chr5 (172-221)||(7629070-7629119)
chr5 (68-224)||(43357724-43357885)
chr5 (78-214)||(27938170-27938302)
chr5 (101-146)||(7977316-7977361)
chr5 (68-177)||(18001930-18002036)
chr5 (102-176)||(27085409-27085483)
chr5 (103-148)||(7629132-7629177)
[»] chr4 (45 HSPs)
chr4 (45-220)||(19738698-19738873)
chr4 (45-224)||(52122811-52122990)
chr4 (45-221)||(8064051-8064227)
chr4 (45-221)||(5325663-5325839)
chr4 (45-223)||(53322335-53322513)
chr4 (101-227)||(5834824-5834950)
chr4 (68-228)||(52721258-52721417)
chr4 (45-224)||(28376993-28377172)
chr4 (102-224)||(41145609-41145731)
chr4 (102-224)||(42472568-42472690)
chr4 (45-222)||(3403528-3403694)
chr4 (101-221)||(38492267-38492377)
chr4 (104-224)||(47607107-47607226)
chr4 (68-221)||(36511898-36512052)
chr4 (101-221)||(40694070-40694190)
chr4 (103-221)||(17892248-17892366)
chr4 (161-226)||(14795018-14795083)
chr4 (103-224)||(46431933-46432053)
chr4 (101-221)||(2586336-2586456)
chr4 (110-211)||(21058843-21058944)
chr4 (102-227)||(55901138-55901263)
chr4 (122-221)||(1176981-1177080)
chr4 (101-223)||(37992531-37992653)
chr4 (122-219)||(51858834-51858931)
chr4 (66-155)||(39957630-39957719)
chr4 (150-224)||(10257697-10257771)
chr4 (140-221)||(44121879-44121960)
chr4 (101-221)||(21637665-21637785)
chr4 (124-212)||(27981905-27981993)
chr4 (45-221)||(52572210-52572364)
chr4 (102-212)||(4400477-4400587)
chr4 (161-222)||(31946263-31946324)
chr4 (122-223)||(44521996-44522097)
chr4 (226-269)||(12205794-12205837)
chr4 (78-221)||(3109280-3109423)
chr4 (140-223)||(51674856-51674939)
chr4 (108-145)||(14795078-14795115)
chr4 (103-155)||(42630485-42630537)
chr4 (161-228)||(36561772-36561838)
chr4 (183-213)||(726624-726654)
chr4 (183-213)||(754190-754220)
chr4 (150-192)||(36943708-36943750)
chr4 (161-214)||(24296505-24296558)
chr4 (101-130)||(31226044-31226073)
chr4 (68-146)||(36943744-36943822)
[»] chr1 (48 HSPs)
chr1 (45-226)||(6916816-6916997)
chr1 (45-225)||(52895655-52895835)
chr1 (45-224)||(38330424-38330603)
chr1 (45-225)||(1043223-1043403)
chr1 (45-221)||(37104120-37104296)
chr1 (45-224)||(28949183-28949362)
chr1 (45-225)||(1036455-1036635)
chr1 (45-224)||(38948729-38948908)
chr1 (101-221)||(20409552-20409672)
chr1 (101-224)||(37346846-37346969)
chr1 (45-224)||(3426845-3427024)
chr1 (101-224)||(43189652-43189775)
chr1 (101-224)||(8132180-8132303)
chr1 (101-224)||(30323712-30323835)
chr1 (45-224)||(36367644-36367813)
chr1 (101-226)||(13012990-13013115)
chr1 (101-220)||(5984228-5984347)
chr1 (101-224)||(31653400-31653523)
chr1 (68-224)||(9781639-9781795)
chr1 (68-212)||(28659265-28659409)
chr1 (101-223)||(25256614-25256736)
chr1 (102-224)||(34432382-34432504)
chr1 (101-224)||(2364674-2364797)
chr1 (103-223)||(14167082-14167202)
chr1 (101-224)||(29167944-29168067)
chr1 (101-219)||(40775997-40776115)
chr1 (101-221)||(10822402-10822523)
chr1 (122-224)||(2472873-2472975)
chr1 (101-219)||(32381057-32381175)
chr1 (105-223)||(48715227-48715345)
chr1 (108-223)||(3708284-3708399)
chr1 (101-219)||(41675987-41676105)
chr1 (101-224)||(34096550-34096673)
chr1 (101-226)||(14334167-14334280)
chr1 (102-214)||(10763668-10763778)
chr1 (122-223)||(29861799-29861900)
chr1 (173-223)||(24849362-24849412)
chr1 (101-223)||(37922265-37922387)
chr1 (104-221)||(2222980-2223097)
chr1 (154-221)||(24590166-24590233)
chr1 (172-215)||(38218404-38218447)
chr1 (104-221)||(15417453-15417570)
chr1 (123-207)||(9528859-9528943)
chr1 (104-216)||(33039618-33039730)
chr1 (172-220)||(36551492-36551540)
chr1 (69-171)||(24851524-24851626)
chr1 (101-177)||(5368584-5368660)
chr1 (161-197)||(47654706-47654742)
[»] chr6 (25 HSPs)
chr6 (45-224)||(1036768-1036947)
chr6 (45-211)||(31195811-31195977)
chr6 (45-221)||(8356958-8357134)
chr6 (101-225)||(3212473-3212597)
chr6 (101-223)||(32130657-32130779)
chr6 (102-227)||(7188778-7188900)
chr6 (104-224)||(27083982-27084102)
chr6 (101-223)||(25834494-25834616)
chr6 (102-224)||(26327152-26327273)
chr6 (101-212)||(32017986-32018097)
chr6 (101-227)||(234300-234426)
chr6 (103-223)||(3299139-3299259)
chr6 (68-221)||(19128153-19128306)
chr6 (140-221)||(29892966-29893047)
chr6 (104-225)||(10894584-10894694)
chr6 (103-223)||(6708041-6708161)
chr6 (123-215)||(13061325-13061417)
chr6 (113-221)||(13607795-13607903)
chr6 (161-221)||(31079612-31079672)
chr6 (101-221)||(11105286-11105406)
chr6 (150-214)||(31741203-31741267)
chr6 (150-223)||(7254928-7255001)
chr6 (101-206)||(22989332-22989437)
chr6 (101-206)||(23798960-23799065)
chr6 (101-145)||(10894519-10894563)
[»] scaffold0640 (1 HSPs)
scaffold0640 (45-225)||(8034-8214)
[»] scaffold0250 (1 HSPs)
scaffold0250 (69-226)||(5507-5664)
[»] scaffold0060 (1 HSPs)
scaffold0060 (45-224)||(30386-30565)
[»] scaffold0177 (1 HSPs)
scaffold0177 (101-227)||(25539-25654)
[»] scaffold0037 (1 HSPs)
scaffold0037 (101-227)||(27789-27905)
[»] scaffold0285 (1 HSPs)
scaffold0285 (101-219)||(13252-13370)
[»] scaffold0112 (1 HSPs)
scaffold0112 (101-221)||(42074-42183)
[»] scaffold0005 (2 HSPs)
scaffold0005 (161-226)||(44648-44713)
scaffold0005 (108-145)||(44616-44653)
[»] scaffold0240 (1 HSPs)
scaffold0240 (101-223)||(10598-10720)
[»] scaffold0406 (1 HSPs)
scaffold0406 (101-224)||(13863-13976)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 32759548 - 32759370
Alignment:
Q  46 acaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgg 145  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  32759548 acaagtatccgtgcgtatcgggacgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgg 32759449  T
Q  146 gaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32759448 gaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgaggcttcacag 32759370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 16384793 - 16384614
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||| | |||||||||||    
T  16384793 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcg 16384694  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16384693 ggaagtatcgggcaggtatcggtgcaggatactcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 16384614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 34901324 - 34901503
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  34901324 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 34901423  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34901424 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 22201279 - 22201459
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  22201279 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 22201378  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    | || |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  22201379 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcgggacttcacagc 22201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 45 - 227
Target Start/End: Complemental strand, 13422384 - 13422202
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| |||||||| |||||||||       | ||||||||||||||||||||||||||||||  ||||||||||    
T  13422384 cacaagtatccgtgcgtatcgggatgtatcggaaagtattggataattattttttaacaaaataaaatttaatatttggatactctccgtatacgtatcg 13422285  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 227  Q
    |||| |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13422284 ggaagtatcaggcaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 13422202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 28876507 - 28876687
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnn-aaaaaataaaatttaatatttggatactctccagatacgtatc 143  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||    
T  28876507 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttttaaaaaataaaatttaatatttggatactctctggatacgtatc 28876606  T
Q  144 gggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28876607 gagaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcacag 28876687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 45 - 227
Target Start/End: Original strand, 12580495 - 12580677
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  12580495 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcagataattatattttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 12580594  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 227  Q
    |||| |||| | ||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  12580595 ggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatctattttgaagtatcggggcttcacagctt 12580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 43771619 - 43771825
Alignment:
Q  18 acagaaatcaaaataatatnnnnnnnncacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaat 117  Q
    |||||||||||||||||||        |||||||||||||||||||| ||| |||||  |||||||||||||||||        ||||||||||||||||    
T  43771619 acagaaatcaaaataatataaaaaaaacacaagtatccgtgcgtatcgggatgtatcgcaaagtatcggataattattttttttaaaaataaaatttaat 43771718  T
Q  118 atttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggc 217  Q
    ||||||||||||||| |||||||||| |||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43771719 atttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggt 43771818  T
Q  218 ttcacag 224  Q
    |||||||    
T  43771819 ttcacag 43771825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 6028607 - 6028484
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6028607 aaaaaataaaatttaatatttggatactctcccgatatgtatcggaaagtatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 6028508  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  6028507 ttttgaagtatcggggcttcacag 6028484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 32877557 - 32877434
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  32877557 aaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatcca 32877458  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  32877457 ttttgaagtatcggggcttcacag 32877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 2872908 - 2873030
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2872908 aaaaaataaaatttcatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 2873007  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||||||||||||||    
T  2873008 ttttgaagtatcggggcttcaca 2873030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 36483555 - 36483432
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36483555 aaaaaataaaatttaatatttggatactcttcggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 36483456  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  36483455 ttttgaagtatcggggcttcacag 36483432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 4246060 - 4245937
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |    
T  4246060 aaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcaggggatacggtacgtcatcta 4245961  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||| |||||||||||||||    
T  4245960 ttttgaagcatcggggcttcacag 4245937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 25022245 - 25022123
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  25022245 aaaaaataaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggagatacggtatgtcatcca 25022146  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    ||||||||||| |||||||||||    
T  25022145 ttttgaagtattggggcttcaca 25022123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 45217218 - 45217342
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||  ||  |||||||    
T  45217218 aaaaaataaaatttaatatttggatactctccggatacgtatcggaaaatatcggacaggtatcggtgcaggatacgcaggggatacaatatatcatcca 45217317  T
Q  201 ttttgaagtatcggggcttcacagc 225  Q
    |||| ||||||||||||||||||||    
T  45217318 ttttaaagtatcggggcttcacagc 45217342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 19947939 - 19948112
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||| ||||||||| | ||||||| ||||  |||||| |||||       |||||||||| || |||||||||||||||||| | |||||||||    
T  19947939 cacaagtatctgtgcgtatcggaacgtatcggaaataatcggaaaattattttcttaaaaaataaagtt-aatatttggatactctcccggtacgtatcg 19948037  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 219  Q
    |||| ||||| |||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  19948038 ggaagtatcgagcaggtatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtatcagggctt 19948112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 37372376 - 37372255
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| || ||||||||||| ||||||||||||||| |||| | ||| |||| |||||||||||||||| |||||| ||||||||||||||    
T  37372376 aaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatacgcaggagatacgatacgtcatccattt 37372277  T
Q  204 tgaagtatcggggcttcacagc 225  Q
    ||||||||||| ||||||||||    
T  37372276 tgaagtatcggagcttcacagc 37372255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 37668702 - 37668577
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||| | |||  ||| |||||||||| |||| | ||||||| |||||| ||||||||||| |||||||||||||||||    
T  37668702 aaaaaataaaatttaatatttggatattatccgtatatgtatcgggaagtatcagacagatattggtgcaagatacgcagggaatacggtacgtcatcca 37668603  T
Q  201 ttttgaagtatcggggcttcacagct 226  Q
    |||||||||||||||| |||||||||    
T  37668602 ttttgaagtatcggggtttcacagct 37668577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 32425040 - 32424928
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||||||| | ||||||||||| ||| |||| | ||| ||||||||||||||||||| |||||||||||||||||||||    
T  32425040 aaaaataaaatttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgcaggatacgcaagggatacggtacgtcatccat 32424941  T
Q  202 tttgaagtatcgg 214  Q
    |||||||||||||    
T  32424940 tttgaagtatcgg 32424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 32638832 - 32638974
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||||          ||| ||||||||    
T  32638832 cgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggg----------caggtatcggtg 32638921  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32638922 caggatacgcaggggatacggtacgtcatccattttgaagtatcagagcttca 32638974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 5818310 - 5818424
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| ||  |||||||||| ||||| ||||||||||||||  |||| ||||||||||||||||||| | |||||| ||||||||||||    
T  5818310 aaaaataaaatttaatcttcagatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgcaagtgatacgatacgtcatccat 5818409  T
Q  202 tttgaagtatcgggg 216  Q
    |||||||||||||||    
T  5818410 tttgaagtatcgggg 5818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 27886309 - 27886188
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||||| ||||   ||| ||||||||||||||| |||||| ||||  ||||||||||||    
T  27886309 aaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccat 27886210  T
Q  202 tttgaagtatcggggcttcaca 223  Q
    |||||||||||||| |||||||    
T  27886209 tttgaagtatcgggacttcaca 27886188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 27944967 - 27944846
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||| |||||| || ||||||||||| ||||||||||||||| ||||   ||| ||||||||||||||| |||||| ||||  ||||||||||||    
T  27944967 aaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccat 27944868  T
Q  202 tttgaagtatcggggcttcaca 223  Q
    |||||||||||||| |||||||    
T  27944867 tttgaagtatcgggacttcaca 27944846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 19436356 - 19436272
Alignment:
Q  139 gtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19436356 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttcaca 19436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 19572505 - 19572421
Alignment:
Q  139 gtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19572505 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttcaca 19572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 29355743 - 29355620
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| ||||||||||| || ||||||||||| | ||||||||||||| ||||  |||| ||||| |||||||||| ||||||||| | || ||||||||    
T  29355743 aaaaattaaaatttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggatatgatatgtcatcca 29355644  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||| |||||||||||    
T  29355643 ttttgaagtatcagggcttcacag 29355620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 38388787 - 38388664
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||| ||| || |||||||| ||| |||||| ||| |||||||||||||||||||| ||||||  |||  ||||||    
T  38388787 aaaaaataaaatttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggtgcaggatacgcagaggatacaatacagcatcca 38388688  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||||||| |||||||    
T  38388687 ttttgaagtatcggggtttcacag 38388664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 12357998 - 12357883
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||          |||||||||||||||||| ||| ||||||| |||||||||||    
T  12357998 aaaaaataaaatttaatatttggatactatgctgatacgtatcgggaa----------gatatcggtgcaggatacacagaggatacg-tacgtcatcca 12357910  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||| |||||||| |||||    
T  12357909 ttttgaagtatccgggcttcatagctt 12357883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 12359126 - 12359011
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||          |||||||||||||||||| ||| ||||||| |||||||||||    
T  12359126 aaaaaataaaatttaatatttggatactatgctgatacgtatcgggaa----------gatatcggtgcaggatacacagaggatacg-tacgtcatcca 12359038  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||| |||||||| |||||    
T  12359037 ttttgaagtatccgggcttcatagctt 12359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 23265768 - 23265649
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||| |||| ||||| || ||||||||||| ||||||||||||||||||| || |||||||| |||||| ||||||||| ||||||||| ||| || ||    
T  23265768 aaaaaaaaaaattaatcttcggatactctcctgatacgtatcgggaaatattggacagatatcagtgcagaatacgcaggagatacggtatgtcgtctat 23265669  T
Q  202 tttgaagtatcggggcttca 221  Q
    ||| ||||||  ||||||||    
T  23265668 tttaaagtatttgggcttca 23265649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 5539541 - 5539433
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    ||||||||||||||||||||||||||||| |||||          ||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||||    
T  5539541 aaataaaatttaatatttggatactctccggatac----------atatcgggcaggtatcggtgcaggatacgca-gggatacagtacatcatccattt 5539453  T
Q  204 tgaagtatcggggcttcacag 224  Q
    ||||||||| |||||||||||    
T  5539452 tgaagtatc-gggcttcacag 5539433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 40412506 - 40412433
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  40412506 tatcgggcaggtaacggtgcaggatacgcaggggatacgatacatcatccattttgaagtattggggcttcaca 40412433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 27968225 - 27968103
Alignment:
Q  101 aaaaaataaaatttaatatttggatac--tctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatc 198  Q
    |||||||||| |||||| || ||||||  ||||| ||||||||||||||| |||| | ||| ||||||||||||||| |||||| ||||  |||||||||    
T  27968225 aaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaatacaatacgtcatc 27968126  T
Q  199 cattttgaagtatcggggcttca 221  Q
     ||||| |||||||||| |||||    
T  27968125 tatttttaagtatcgggacttca 27968103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 28025211 - 28025089
Alignment:
Q  101 aaaaaataaaatttaatatttggatac--tctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatc 198  Q
    |||||||||| |||||| || ||||||  ||||| ||||||||||||||| |||| | ||| ||||||||||||||| |||||| ||||  |||||||||    
T  28025211 aaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaatacaatacgtcatc 28025112  T
Q  199 cattttgaagtatcggggcttca 221  Q
     ||||| |||||||||| |||||    
T  28025111 tatttttaagtatcgggacttca 28025089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 42949250 - 42949179
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcagg 172  Q
    |||||||||||||||||||||||||||||||| |||||||||||  || |||| | ||||||||||||||||    
T  42949250 aaaaaataaaatttaatatttggatactctcccgatacgtatcgaaaagtatcagacagatatcggtgcagg 42949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 32768 - 32678
Alignment:
Q  134 gatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||||||||| | || |||||||||||||||| |||||||||| ||| ||||| | ||||||| ||||||| |||||||||||||| ||||    
T  32768 gatacgtatcagaaagtatcgggcagatatcgatgcaggatacacagaggatatgatacgtcaaccattttaaagtatcggggctttacag 32678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 7411707 - 7411636
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||| ||||| |||||||||| ||| ||||||| |||| |||||||||||||||||||| ||||||    
T  7411707 tatcgggcaggtatcgatgcaggatacacagtggatacgatacgccatccattttgaagtatcggagcttca 7411636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 20182493 - 20182380
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| ||||||||||| ||  |||||||| | |||||||||||  || |||| | ||||||| | ||||||||| ||| ||||||| ||||||||||||    
T  20182493 aaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatatag-tgcaggatatgcacgggataccgtacgtcatcca 20182395  T
Q  201 ttttgaagtatcggg 215  Q
    | |||||||||||||    
T  20182394 tcttgaagtatcggg 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 30804750 - 30804846
Alignment:
Q  108 aaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatttt 204  Q
    |||| |||||||| ||||||||||| |||||||||||| || ||||| ||| |||| | |||| ||||||||||  ||||  ||||||||| |||||    
T  30804750 aaaaattaatattcggatactctcctgatacgtatcggaaagtatcgagcaaatattgatgcaagatacgcaggatatacaatacgtcatctatttt 30804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 3892075 - 3891960
Alignment:
Q  108 aaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 207  Q
    |||||||||| || | ||||||||  ||||||||| || || |||| | ||  |||||||||| |||||| ||| ||||   ||||||||||||||||||    
T  3892075 aaaatttaatcttcgaatactctctcgatacgtattggaaagtatcagacaagtatcggtgcatgatacgtaggagatataatacgtcatccattttgaa 3891976  T
Q  208 gtatcggggcttcaca 223  Q
    | ||||||| ||||||    
T  3891975 gaatcggggtttcaca 3891960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 17702615 - 17702490
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggata-cggtacgtcatcc 199  Q
    ||||||||||||||||| ||  |||||||||| ||||||||||| | | ||||||| || ||||||| || |||||| |   |||| || ||| ||||||    
T  17702615 aaaaaataaaatttaattttcagatactctcccgatacgtatcgaggagtatcgggaaggtatcggtacacgatacg-atatgataccgatacttcatcc 17702517  T
Q  200 attttgaagtatcggggcttcacagct 226  Q
    ||||||||||||| | |||||| ||||    
T  17702516 attttgaagtatctgagcttcagagct 17702490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 28737299 - 28737255
Alignment:
Q  177 gcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||||  |||||||||||||||||| |||||||||||||    
T  28737299 gcaggggatacaatacgtcatccattttgaaatatcggggcttca 28737255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 10349364 - 10349254
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| ||  |||||| ||| ||||||||||| ||| |||| | || ||||| || ||| |||| |||  |||||  ||| |||||||    
T  10349364 aaaaaataaaatttaatcttcagatactttcctgatacgtatcgagaagtatcagacatatatcagtacagaatacacagatgatacaatacatcatcca 10349265  T
Q  201 ttttgaagtat 211  Q
    |||| ||||||    
T  10349264 ttttaaagtat 10349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 41099377 - 41099406
Alignment:
Q  194 tcatccattttgaagtatcggggcttcaca 223  Q
    ||||||||||||||||||||||||||||||    
T  41099377 tcatccattttgaagtatcggggcttcaca 41099406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 24100191 - 24100243
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatc 153  Q
    ||||| ||||||||||| || ||||||||||| ||||| |||||| |||||||    
T  24100191 aaaaattaaaatttaatcttcggatactctcctgatacatatcggaaaatatc 24100243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 40412569 - 40412508
Alignment:
Q  66 ggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatac 127  Q
    |||||||||  |||||||||||||||||       |||||||||||||||||||| ||||||    
T  40412569 ggacgtatcgaaaagtatcggataattatttttttaaaaaataaaatttaatattcggatac 40412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 6e-71; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 27354121 - 27353913
Alignment:
Q  18 acagaaatcaaaataatatnnnnnnnncacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaat 117  Q
    |||||||||||||||||||        |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||    
T  27354121 acagaaatcaaaataatataaaaaaaacacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaat 27354022  T
Q  118 atttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggc 217  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27354021 atttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagggaatacggtacgtcatccattttgaagtatcggggc 27353922  T
Q  218 ttcacagct 226  Q
    |||||||||    
T  27353921 ttcacagct 27353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 48163581 - 48163402
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  48163581 cacaagtatccgtgcgtatcaggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 48163482  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48163481 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcacccattttgaagtatcggggcttcacag 48163402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 11829862 - 11829684
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||| |    
T  11829862 cacaagtatccgtgcgtatcgggacgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtattg 11829763  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11829762 ggaagtatcaggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 11829684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 45 - 226
Target Start/End: Complemental strand, 40095823 - 40095642
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  40095823 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 40095724  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40095723 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 40095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 34238331 - 34238152
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||    
T  34238331 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccgaatacgtatcg 34238232  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34238231 gaaagtatcgggcaggtatcggtgcagaatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 34238152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 27555284 - 27555489
Alignment:
Q  18 acagaaatcaaaataatatnnnnnnnncacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaat 117  Q
    |||||||||||||||||||        |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||    
T  27555284 acagaaatcaaaataatataaaaaaaacacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaat 27555383  T
Q  118 atttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggc 217  Q
    ||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||    
T  27555384 atttggatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagagaatacggtacgtcatccattttgaagtatcagggc 27555483  T
Q  218 ttcaca 223  Q
    ||||||    
T  27555484 ttcaca 27555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 38263172 - 38262993
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  38263172 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 38263073  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38263072 gaaagtatcgggcaggtatcgatgcaggatacgcagagaatacggtacgtcatccattttgaagtatcggggcttcacag 38262993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 25969550 - 25969391
Alignment:
Q  66 ggacgtatcagaaagtatcggataatta-nnnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatc 164  Q
    ||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  25969550 ggacgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatc 25969451  T
Q  165 ggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25969450 ggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacag 25969391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 16850959 - 16850780
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||    
T  16850959 cacaagtatccgtacgtatcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcagatacgtatcg 16850860  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||  |||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16850859 gaaagtatcgggcaagtatcggtgcatgatacacagggaatacggtacgtcatccattttgaaatatcggggcttcacag 16850780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 26773654 - 26773833
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||| ||||||||||||| ||||  ||||||||| || |||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  26773654 cacaagtatctgtgcgtatcaggatgtattggaaagtatcagaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 26773753  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
     ||| |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||    
T  26773754 agaagtatcgggcagatatcggtgcaggatacgcaagggatacgatacgtcatcaattttaaagtatcggggcttcacag 26773833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 34122615 - 34122735
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  34122615 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatcca 34122714  T
Q  201 ttttgaagtatcggggcttca 221  Q
    ||||||||||||  |||||||    
T  34122715 ttttgaagtatctaggcttca 34122735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 210
Target Start/End: Original strand, 9250383 - 9250529
Alignment:
Q  66 ggacgtatcagaaagtatcggataattannnnnnnaaaa--aataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatat 163  Q
    ||||||||| ||||||||||||||||||       ||||  |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||    
T  9250383 ggacgtatcggaaagtatcggataattattttaataaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtat 9250482  T
Q  164 cggtgcaggatacgcaggggatacggtacgtcatccattttgaagta 210  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  9250483 cggtgcaggatacgcaggggatacgatacgtcatccattttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 1043069 - 1043189
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || |||| ||||| ||||| |||||||||||||||||||||| |||||||||||    
T  1043069 aaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggatacgcaggggatacgatacgtcatcca 1043168  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  1043169 ttttgaagtatcggggcttca 1043189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 26845869 - 26846006
Alignment:
Q  76 gaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggata 175  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||    
T  26845869 gaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggata 26845968  T
Q  176 cgcaggggatacggtacgtcatccattttgaagtatcg 213  Q
    |||| | |||||||||| ||||||||||||||||||||    
T  26845969 cgcatgagatacggtacatcatccattttgaagtatcg 26846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 42897140 - 42896997
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||           ||    
T  42897140 cgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgg-----------tg 42897052  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42897051 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 42896997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 47238559 - 47238728
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||| |||||||| ||||||||  |||||| |||||||||||       ||||||||||||||||||||||||||||||||||||||          
T  47238559 cacaagtatccttgcgtatcgggacgtattggaaagtgtcggataattattttttaaaaaaataaaatttaatatttggatactctccagatac------ 47238652  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
        ||||||||||| ||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  47238653 ----atatcgggcaggtatcggtgcaatatacgcaggggatacgatacatcatccattttgaagtatcggggcttcacag 47238728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 39520906 - 39520793
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||           ||||||||||||||||||||||||||||||||||    
T  39520906 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgg-----------tgcaggatacgcaggggatacggtacgtcatcca 39520818  T
Q  201 ttttgaagtatcggggcttcacagc 225  Q
    |||||||||||||||||||||||||    
T  39520817 ttttgaagtatcggggcttcacagc 39520793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 27398046 - 27398171
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||||| ||||| ||| || || ||||| |||| |||| |||||||||||||||||||||| |||||||||||||    
T  27398046 aaaaataaaatttaatatttggatactctccggatacatattggaaagtatcgagcaggtatcagtgcaggatacgcaggggatacagtacgtcatccat 27398145  T
Q  202 tttgaagtatcggggcttcacagctt 227  Q
    ||| ||||||| |||||||| |||||    
T  27398146 tttaaagtatccgggcttcatagctt 27398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 19510640 - 19510518
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||||||||||||||| || ||||| |||| |||| |||||||||  |||| ||||| ||||| ||||||||||| |||||||||||    
T  19510640 aaaaaataaaatttaatatttggatactcacccgatacatatcaggaagtatcgggcatgtatcagtgcatgatacacaggggatacgatacgtcatcca 19510541  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||||||| ||||||    
T  19510540 ttttgaagtatcggggtttcaca 19510518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 33454187 - 33454065
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||| ||| |||| | || ||||| ||||||||||||||||||||||| |||||||||||    
T  33454187 aaaaaataaaatttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagtgcaggatacgcaggggatacgatacgtcatcca 33454088  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    ||||||| |||||||||||||||    
T  33454087 ttttgaaatatcggggcttcaca 33454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 44960133 - 44960255
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| |||||||||||| | ||||| ||||||||| |||| | ||| | || ||||||||||||||||||||||| |||||||||||    
T  44960133 aaaaaataaaatttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagtgcaggatacgcaggggatacgatacgtcatcca 44960232  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||||| ||||||||    
T  44960233 ttttgaagtatcggagcttcaca 44960255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 36202754 - 36202891
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||||          |||  |||||||    
T  36202754 cgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg----------caggcatcggtg 36202843  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36202844 caggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 36202891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 4291596 - 4291507
Alignment:
Q  134 gatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4291596 gatacgtatcgggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttcaca 4291507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 23079059 - 23079160
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| ||||||||||||||| ||||||| || ||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  23079059 ggatactctcctgatacgtatcgggaagtatcgggtaggtatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatcggggctaca 23079158  T
Q  222 ca 223  Q
    ||    
T  23079159 ca 23079160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 11058466 - 11058346
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    ||||||||||||||| |  ||||||||||  ||||||||| | || |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  11058466 aaataaaatttaataatctgatactctcccaatacgtatctgaaagtatcagacagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 11058367  T
Q  204 tgaagtatcggggcttcacag 224  Q
    ||||||| | || ||||||||    
T  11058366 tgaagtacctggacttcacag 11058346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 21409508 - 21409385
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||  |||| ||||| |||| ||||||||||  |||| |||||| |||||||||||    
T  21409508 aaaaaataaaatttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcaggatatacaggagatacgatacgtcatcca 21409409  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||| ||||||  |||||||||||    
T  21409408 tttttaagtatgagggcttcacag 21409385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 35159980 - 35159862
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| |||  | ||  ||||||||||| ||| |||||||||||| ||| |||||||||    
T  35159980 aaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggtgcagaatatgcaggggatacgatacatcatccatt 35159881  T
Q  203 ttgaagtatcggggcttca 221  Q
    |||||||||||| ||||||    
T  35159880 ttgaagtatcggagcttca 35159862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 38064710 - 38064590
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    |||||| |||||||| || ||||||||||| |||||||||||| || |||||| ||| |||| ||||| |||||||| | |||||| || ||||||||||    
T  38064710 aaaatataatttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccatt 38064611  T
Q  203 ttgaagtatcggggcttcaca 223  Q
    || ||||||||||||||||||    
T  38064610 ttaaagtatcggggcttcaca 38064590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 18113938 - 18114055
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| ||  |||||||||| ||||| |||| |||| |||| ||||||||||||||||||||||  || ||||| ||||||||||||||    
T  18113938 aaaaataaaatttaatcttcagatactctcctgatacatatcaggaagtatcaggcagatatcggtgcaggatacatagaggatatggtacgtcatccat 18114037  T
Q  202 tttgaagtatcggggcttc 220  Q
    |||||| |||| |||||||    
T  18114038 tttgaa-tatctgggcttc 18114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 23311839 - 23311736
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||| ||||| ||||||||| |||| | || ||||||||||||||||| || |||||||||||| ||||| |    
T  23311839 aaaaaataaaatttaatcttcggatactctcctgatacatatcgggaagtatcagacatatatcggtgcaggatacacatgggatacggtacatcatcta 23311740  T
Q  201 tttt 204  Q
    ||||    
T  23311739 tttt 23311736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 16564416 - 16564482
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 227  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  16564416 tatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagctt 16564482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 227
Target Start/End: Complemental strand, 16601337 - 16601180
Alignment:
Q  48 aagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcggga 147  Q
    ||||||||||||||||| ||||||||| |||||||||  | |||||       |||||||||||||||||||||||||||||||| |||||||||||||     
T  16601337 aagtatccgtgcgtatcgggacgtatcggaaagtatcata-aattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcggg- 16601240  T
Q  148 aatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagctt 227  Q
                        |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  16601239 --------------------gcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggacttcagagctt 16601180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 8028814 - 8028738
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||| | |||||||||||||||||    
T  8028814 aaaatataaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggccggtatcggtgcaggatacg 8028738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 24956366 - 24956244
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||  |||||||||||| || |||| ||||  ||||  |||| |||| | |||||||||| ||||||||| |||    
T  24956366 aaaataaaatttaatcttcggatactctcttgatacgtatcggaaagtatcaggcatgtatcaatgcatgatatgtaggggatacgatacgtcatcaatt 24956267  T
Q  203 ttgaagtatc-ggggcttcacag 224  Q
    |||||||||| ||||||||||||    
T  24956266 ttgaagtatctggggcttcacag 24956244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 16564325 - 16564422
Alignment:
Q  48 aagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcggg 146  Q
    ||||||||||||||||| ||||||||| |||||||||  | |||||       |||||||||||||||||||||||||||||||| |||||||||||||    
T  16564325 aagtatccgtgcgtatcgggacgtatcggaaagtatcata-aattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcggg 16564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 1363010 - 1363130
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||| ||| ||||  |||  |||| ||||| ||||| |||||||||  || | |||||||    
T  1363010 aaaaaataaaatttcatattcggatactctcctgatacgtatcgagaagtatcaagcatgtatcagtgcaagatacacaggggataatgttcatcatcca 1363109  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||| || |||||    
T  1363110 ttttgaagtatctggacttca 1363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 554865 - 555001
Alignment:
Q  78 aagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||||||||||       ||||||||||||||||| || | ||||||||| |||||||||| ||||          | ||||||||||||||||     
T  554865 aagtatcggataattatttttaaaaaaaataaaatttaatcttcgaatactctcctgatacgtatcaggaa----------ggtatcggtgcaggataca 554954  T
Q  178 caggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||    
T  554955 caggggatacgatacgtcatctattttagagtatcggggcttcacag 555001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 8056332 - 8056438
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| ||  |||||||||| |||||||||||| || || |    ||| |||||| || ||||||||  |||||||||||||||||||    
T  8056332 aaaaaataaaatttaatcttcagatactctcctgatacgtatcggaaagtacc----agacatcggtacaagatacgcaaaggatacggtacgtcatcca 8056427  T
Q  201 ttttgaagtat 211  Q
    |||||||||||    
T  8056428 ttttgaagtat 8056438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 23970091 - 23970244
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| ||||||||||| ||||||       | ||||||||||||||| ||  |||||||| |  ||||||||| |||| |||| | ||||||||| |    
T  23970091 acgtatcggaaagtatcgggtaattattttttaagaaaataaaatttaatcttcagatactcttctaatacgtatcaggaagtatcagacagatatcgat 23970190  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||| |||||||||||||||   ||||||||||||| |||| ||| ||| |||||    
T  23970191 gcatgatacgcaggggatataatacgtcatccattatgaaatattgggacttca 23970244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 35136127 - 35136056
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||||||||||||| ||||| ||||  ||||||||||||| ||||||||||||||| | ||||||    
T  35136127 tatcgggcagatatcggtgcaagatacccaggaaatacggtacgtcacccattttgaagtatccgagcttca 35136056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 44269842 - 44269729
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| ||||||||||| ||  |||||||| | |||||||||||  || |||| | ||||||| | ||||||||| ||| ||||||| ||||||||||||    
T  44269842 aaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatatag-tgcaggatatgcacgggataccgtacgtcatcca 44269744  T
Q  201 ttttgaagtatcggg 215  Q
    | |||||||||||||    
T  44269743 tcttgaagtatcggg 44269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 15878402 - 15878462
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||  |||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  15878402 tatcggtataggatacgtaggggatacggtacatcatccgttttgaagtatcggggcttca 15878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 36758054 - 36758114
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||| |||||||||    
T  36758054 tatcggtgcagaatacgcaggggatacgatacatcattcattttgaagtattggggcttca 36758114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 36767578 - 36767638
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||| |||||||||    
T  36767578 tatcggtgcagaatacgcaggggatacgatacatcattcattttgaagtattggggcttca 36767638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 47720170 - 47720217
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaa 148  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  47720170 aaaaaataaaatttaatattcggatactctccggatacgtatcgggaa 47720217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 40041494 - 40041376
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||| ||||||||||  ||| |||| | ||  |||| || ||||||||| ||| |||||| ||| ||||| |||    
T  40041494 aaaataaaatttaatcttcggatactctcctgatacgtatcaagaagtatcagacatgtatcagtacaggatacgtaggagatacgatacatcatctatt 40041395  T
Q  203 ttgaagtatcggggcttca 221  Q
    ||||| |||| | ||||||    
T  40041394 ttgaaatatcagagcttca 40041376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 48153698 - 48153620
Alignment:
Q  134 gatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 212  Q
    |||||||||||| |||||| | |||| ||||||||||| ||||| || ||||||| ||| ||||||||||| |||||||    
T  48153698 gatacgtatcggaaaatattgagcaggtatcggtgcagaatacggagaggatacgatacatcatccattttaaagtatc 48153620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 49015068 - 49015175
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||  ||||||||||| | ||||||||||||   || || | ||| |||||||| | ||||| || | ||||||||| ||||||||    
T  49015068 aaaaaataaaatttaatcgttggatactcttctgatacgtatcgg---at-tcagacaggtatcggtgtatgatacacatgagatacggtatgtcatcca 49015163  T
Q  201 ttttgaagtatc 212  Q
    ||||||||||||    
T  49015164 ttttgaagtatc 49015175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 2908237 - 2908364
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||| |||||  | || ||||||||||||||||||||||   |||| ||||||||||| |||| |||| | |   ||||| ||| |||||| |    
T  2908237 aaaaaataaaacttaattgtcgggtactctccagatacgtatcggggtgtatcaggcagatatcgctgcatgatatgtatctgatacagtatgtcatcaa 2908336  T
Q  201 ttttgaagtatcggggcttcacagcttc 228  Q
    ||||||| |||  | |||||||||||||    
T  2908337 ttttgaaatatatgtgcttcacagcttc 2908364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 36660595 - 36660551
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgg 145  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||    
T  36660595 aaaaaataaaatttaatatttgaatactctctggatacgtatcgg 36660551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 211
Target Start/End: Complemental strand, 30404010 - 30403903
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    ||||||||||||||  ||| ||| ||||| |||||||||||| | ||||||  ||| ||||||| || |||||| |   |||||| ||| ||||| ||||    
T  30404010 aaataaaatttaattattgaatattctcctgatacgtatcggaacatatcgaacaggtatcggtacatgatacgtatctgatacgatacatcatcaattt 30403911  T
Q  204 tgaagtat 211  Q
    ||||||||    
T  30403910 tgaagtat 30403903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 1400282 - 1400347
Alignment:
Q  110 aatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggata 175  Q
    |||||||||||  ||||| || | |||||||||| |||| ||||| |||| |||||||||||||||    
T  1400282 aatttaatattcagatacgcttctgatacgtatccggaagtatcgagcaggtatcggtgcaggata 1400347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 40041543 - 40041510
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgg 155  Q
    ||||||||||| ||||||||||||||||||||||    
T  40041543 ggatactctcctgatacgtatcgggaaatatcgg 40041510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 7416729 - 7416689
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatc 143  Q
    ||||||||||||||| || ||||||||||| ||||||||||    
T  7416729 aaaataaaatttaatcttcggatactctcctgatacgtatc 7416689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 38064782 - 38064738
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgg 145  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||    
T  38064782 aaaaaataaaatttaatcttcggatactctcttgatacgtatcgg 38064738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 7876890 - 7876711
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  7876890 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg 7876791  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7876790 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 7876711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 33324994 - 33324814
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  33324994 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 33324895  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33324894 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 33324814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 38602264 - 38602443
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||  ||||||||| ||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  38602264 cacaagtatccgtgcgtatcgagacgtattggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 38602363  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38602364 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 38602443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 45 - 234
Target Start/End: Complemental strand, 16561976 - 16561787
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||  ||| ||||| ||||| |||||| |||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  16561976 cacaagtatccgtgcgtattgggatgtatcggaaagcatcggacaattattttataaaaaaataaaatttaatatttggatactctccggatacgtatcg 16561877  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagcttcatacaa 234  Q
    |||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  16561876 ggaagtatcgggcaggtatcggtgcagaatacgcaagggatacggtacgtcatccattttgaagtatcggggcttcacaggttaatacaa 16561787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 40308839 - 40309019
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||   |||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  40308839 cacaagtatccgtgcgtatcgggatgtattgaaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 40308938  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  40308939 ggaagtatcgggcaggtatcggtgcaggatacgcatgggatacggtacgtcatctattttgaagtatcggggcttcacagc 40309019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 7807316 - 7807495
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| |||       |||||||||||||||||||||||||||| ||| |||||||||||    
T  7807316 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggatagttattttttaaaaaaataaaatttaatatttggatactttccggatacgtatcg 7807415  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||  ||| ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7807416 ggaagtatcgaacaggtatcggtacaagatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacag 7807495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 4170501 - 4170623
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  4170501 aaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccat 4170600  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    ||||||||||||| |||||||||    
T  4170601 tttgaagtatcggagcttcacag 4170623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 6124349 - 6124170
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||     
T  6124349 cacaagtatccgtgcgtatcgggatgtatcgcaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatca 6124250  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||| ||  |||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||    
T  6124249 ggaagtatcggacatgtatcggtgcaggatacacaggggatacaatacgtcatccattttaaagtatcggggcttcacag 6124170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 18301148 - 18300969
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||||||||| |||||||||| | |||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  18301148 cacaagtatccgtgcgtatcgggacgtatcggaaagtatcgaaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 18301049  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
     ||| |||| | ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  18301048 agaagtatcagacaggtatcggtgcagaatacacaggggatacgatacgtcatccattttgaagtatcagggcttcacag 18300969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 22484387 - 22484267
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||| |||||||    
T  22484387 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcggacagatatcgatgcaggatacgcagggaatacggtacatcatcca 22484288  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  22484287 ttttgaagtatcggggcttca 22484267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 6497647 - 6497769
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  6497647 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagaatcagacaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 6497746  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    ||||||||||||||| |||||||    
T  6497747 ttttgaagtatcgggacttcaca 6497769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 22571054 - 22570937
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||||||||||||||| || |||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  22571054 aaataaaatttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattt 22570955  T
Q  204 tgaagtatcggggcttca 221  Q
    ||||||||| ||||||||    
T  22570954 tgaagtatctgggcttca 22570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 34146333 - 34146180
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||||| ||||||||||||||||        |||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  34146333 acgtatcaggaagtatcggataattattttttttaaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggt 34146234  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| ||||||||  |||||| ||||||||||||||| ||||||||| ||||||    
T  34146233 gcagaatacgcagaagatacgatacgtcatccattttaaagtatcggagcttca 34146180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 4355480 - 4355325
Alignment:
Q  66 ggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcg 165  Q
    ||||||||| | ||||||||||||||||       ||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||  |||| |||||    
T  4355480 ggacgtatcgggaagtatcggataattagttttttaaaaaataaaatttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcg 4355381  T
Q  166 gtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  4355380 gtgcagaatacgcagggaatacgatacgtcatccattttgaagtatcgaggcttca 4355325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 1776434 - 1776557
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||||||||||| ||  ||||||||| ||||||||||| ||||||| |||||||| ||||||| |||    
T  1776434 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtgcagaatacgcaagggatacgatacgtcaacca 1776533  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  1776534 ttttgaagtatcggggcttcacag 1776557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 28746650 - 28746773
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| |||| ||||| || ||||||||| | |||||||||||  || |||||||||| |||||||||||||||||||||||||||| ||||||| |||    
T  28746650 aaaaaaaaaaaattaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaacca 28746749  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  28746750 ttttgaagtatcggggcttcacag 28746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 35342436 - 35342317
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || |||||||||   ||||||||||||||| |||| || || ||||||||||||||||||| |||||||||||||||||||||    
T  35342436 aaaaataaaatttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcggtgcaggatacgcaagggatacggtacgtcatccat 35342337  T
Q  202 tttgaagtatcggggcttca 221  Q
    |||||||||||||| |||||    
T  35342336 tttgaagtatcgggacttca 35342317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 14217152 - 14217272
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| || ||||   ||||||||||||||| |||||||||||||||  |||||||||||    
T  14217152 aaaaaaaaaaatttaatctttagatactctccagatacgtatcggaaagtatcaaacagatatcggtgcagaatacgcaggggatacaatacgtcatcca 14217251  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||| ||||||    
T  14217252 ttttgaagtatcggagcttca 14217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 4561908 - 4561785
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||| |||||||||| |||||||||| |||||||||||||||| || || ||||| |||||||||||    
T  4561908 aaaaaataaaatttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggtgcaggatacacaaggaatacgatacgtcatcca 4561809  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||| || |||||||||    
T  4561808 ttttgaagtattggagcttcacag 4561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 31236184 - 31236307
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||  |||| | | |||||||||||||||||||||||  ||||| |||||    
T  31236184 aaaaattaaaatttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggtgcaggatacgcaggggatacaatacgttatcca 31236283  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||| |||||||||||||||||||    
T  31236284 ttttaaagtatcggggcttcacag 31236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 2319395 - 2319274
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||||||||| |||| ||||  |||  |||||||||| ||||||||||||||||| |||||||||||    
T  2319395 aaaaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtgcaagatacgcaggggatacgatacgtcatcca 2319296  T
Q  201 ttttgaagtatcggggcttcac 222  Q
    |||||||||||||||| |||||    
T  2319295 ttttgaagtatcggggtttcac 2319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 44156751 - 44156597
Alignment:
Q  68 acgtatcagaaagtatcggataatta-nnnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcgg 166  Q
    ||||||||| ||||||||||||||||        ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| | ||  |||||     
T  44156751 acgtatcaggaagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcga 44156652  T
Q  167 tgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  44156651 tgcatgatacgcaggggatacgatatgtcatccattttgaagtatcggggattca 44156597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 8482892 - 8483029
Alignment:
Q  78 aagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||||||||||       ||||||||||||||||| || ||||||||| | |||||||||||| || |||| | |||||||||||||||||||||    
T  8482892 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacg 8482991  T
Q  178 caggggatacggtacgtcatccattttgaagtatcggg 215  Q
    ||  ||||||| |||||||| |||||||||||||||||    
T  8482992 caaaggatacgatacgtcattcattttgaagtatcggg 8483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 1005665 - 1005512
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||||| ||||||| ||||||||       || |||||||||||||| ||  |||||||| |  |||||||||||||| |||||  ||| |||||||    
T  1005665 acgtatcaggaagtatcagataattatttaaaaaataaataaaatttaatcttcagatactcttctaatacgtatcgggaagtatcga-caggtatcggt 1005567  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  1005566 gcaggatacgcaggggatacgatacgtcatccattttgaagtatcagagcttcac 1005512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 24585649 - 24585530
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| |||| ||||| ||||||||| |||| |||||||||| |||| |||| | ||| ||||||||||||||||||| |||||||| ||| |||||||    
T  24585649 aaaaaaaaaaaattaatctttggatacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgca-gggatacgatacatcatcca 24585551  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  24585550 ttttgaagtatcggggcttca 24585530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 20536884 - 20536772
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| ||           ||||||||||||||| |||||||||||| ||||||||||||    
T  20536884 aaaaataaaatttaatatttggatactcttccgatacgtatcgggcaag----------tatcggtgcaggatatgcaggggatacgatacgtcatccat 20536795  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||    
T  20536794 tttgaagtatcggggcttcacag 20536772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 37134299 - 37134414
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| ||   ||||||||  ||||||||||||||| ||||  ||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  37134299 aaataaaatttaatcttcatatactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattt 37134398  T
Q  204 tgaagtatcggggctt 219  Q
    ||||||||| ||||||    
T  37134399 tgaagtatctgggctt 37134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 40497384 - 40497486
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| |||| | ||| ||||  |||| ||||||||||||||| ||||||||||||||    
T  40497384 aaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacaggtatcactgcaagatacgcaggggataaggtacgtcatccat 40497483  T
Q  202 ttt 204  Q
    |||    
T  40497484 ttt 40497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 21104602 - 21104482
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| || |||||||| || ||||||||    |||||||||||||||||||| | |||||||||||||| ||||||||| ||||||| |||||||||||    
T  21104602 aaaaagtataatttaatcttcggatactcctttgatacgtatcgggaaatatcagacagatatcggtgcaagatacgcagaggatacgatacgtcatcca 21104503  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||| |||||| |||||||||    
T  21104502 ttttaaagtattggggcttca 21104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 45159270 - 45159418
Alignment:
Q  64 caggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatat 163  Q
    ||||||||||| ||||||||||||||| ||       ||||| |||||||||||||| | ||||||| ||||||||||||          ||||||||||    
T  45159270 caggacgtatcggaaagtatcggataagtatttttttaaaaa-taaaatttaatattcgaatactcttcagatacgtatc----------gggcagatat 45159358  T
Q  164 cggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
     |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  45159359 tggtgcaagatacgcaagggatacgatacgtcatccattttgaagtatcggggcttcaca 45159418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 43214682 - 43214566
Alignment:
Q  113 ttaatatttggatactctccagatac--gtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagta 210  Q
    ||||| || ||||||||||| ||||   |||||||||| |||||| ||||||||| |||||||||| || |||||||| |||||||||||||||||||||    
T  43214682 ttaatcttcggatactctcctgatatatgtatcgggaagtatcggtcagatatcgatgcaggatacacatgggatacgatacgtcatccattttgaagta 43214583  T
Q  211 tcggggcttcacagctt 227  Q
    || || ||||| |||||    
T  43214582 tctggacttcagagctt 43214566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 25933685 - 25933565
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||| ||||||||| || ||||||||||| |||  |||||| ||| |||| |  |||||| |||||| ||||||||||||||||| ||| |||||||    
T  25933685 aaaaaattaaatttaatcttcggatactctcctgatctgtatcgagaagtatcagatagatattggtgcatgatacgcaggggatacgatacatcatcca 25933586  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||  ||||||||    
T  25933585 ttttgaagtatatgggcttca 25933565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 35996763 - 35996651
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || | ||||||||| |||||||||||  || |||||  ||| |||||||||| ||||||||||||||||  ||| |||| ||    
T  35996763 aaaaaataaaatttaatcttcgaatactctcctgatacgtatcgaaaagtatcgaacaggtatcggtgcaagatacgcaggggatacaatacatcattca 35996664  T
Q  201 ttttgaagtatcg 213  Q
    |||||||||||||    
T  35996663 ttttgaagtatcg 35996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 12206142 - 12206024
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| || | ||||||||| ||||||||| |  ||||||| ||||| ||||| |||| ||||| |||  |||||| ||||||||||||||    
T  12206142 aaataaaatttaatcttcgaatactctcctgatacgtattgaaaaatatcaggcaggtatcgatgcaagatacacagatgatacgatacgtcatccattt 12206043  T
Q  204 tgaagtatcggggcttcac 222  Q
    | ||||| ||| |||||||    
T  12206042 taaagtaccggagcttcac 12206024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 5588208 - 5588104
Alignment:
Q  120 ttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 219  Q
    ||||||||||||  |||| ||||| |||| |||  | ||| |||||||||| |||||  || ||||||| ||||||||||||||||||||||||| ||||    
T  5588208 ttggatactctcatgatatgtatcaggaagtatgagacaggtatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatcggagctt 5588109  T
Q  220 cacag 224  Q
    |||||    
T  5588108 cacag 5588104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 12819354 - 12819298
Alignment:
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  12819354 gcaggatacacaggggatacggtacatcatccattttgaagtatcagggcttcacag 12819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 213
Target Start/End: Original strand, 3545581 - 3545691
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || |||| |||||| ||||| ||||| ||| |||| | ||  ||||||||||| ||||| |   |||||| |||||||||||||    
T  3545581 aaaataaaatttaatcttcggatgctctcctgatacatatcgagaagtatcagacaagtatcggtgcagaatacgtaaaagatacgatacgtcatccatt 3545680  T
Q  203 ttgaagtatcg 213  Q
    |||||||||||    
T  3545681 ttgaagtatcg 3545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 14824212 - 14824146
Alignment:
Q  157 cagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||| |||||||    
T  14824212 cagatatcggtgcatgatacgcaagagatacgatacgtcatctattttgaagtatcgggacttcaca 14824146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 3563957 - 3563851
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| || ||||||||||| ||||||||||||||| |||| |           ||||| ||| | |||||||||  ||||||||||||||    
T  3563957 aaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcag-----------tgcagaatatgtaggggatacaatacgtcatccattt 3563869  T
Q  204 tgaagtatcggggcttca 221  Q
    ||||||||||||||||||    
T  3563868 tgaagtatcggggcttca 3563851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 40536313 - 40536242
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||| || ||||||||||||||||||| | ||||| |||||| | ||||||||||||||  ||||||||    
T  40536313 tatcgggtaggtatcggtgcaggatacgcatgtgatacagtacgttacccattttgaagtatttgggcttca 40536242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 14824307 - 14824274
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgg 155  Q
    ||||||||||| ||||||||||||||||||||||    
T  14824307 ggatactctcctgatacgtatcgggaaatatcgg 14824274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 22571114 - 22571066
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataatta 93  Q
    |||||||||||||||||||| ||| ||||| ||||||||| ||| ||||    
T  22571114 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcagattatta 22571066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 37996753 - 37996934
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  37996753 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 37996852  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37996853 ggaaatatcgggcaggtctcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatcggggcttcacagct 37996934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 40497506 - 40497327
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  40497506 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 40497407  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40497406 ggaagtatcgggcaagtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 40497327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 22310881 - 22310703
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||| ||||||||   |||||||||||    
T  22310881 cacaagtatccgtacgtatcaggacgtatcagaaagtatcggaaaattattttcttaaaaaataaaatttaatattttgatactctatcgatacgtatcg 22310782  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||| |||| ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22310781 ggaagtatcaggcaggtatcggtgcaggatacacaggggatacggtacgtcatccattgtgaagtatcggggcttcaca 22310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 7327832 - 7327706
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7327832 aaaaaataaaatttaatatttggatactatccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 7327733  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||||||||||||||||||    
T  7327732 ttttgaagtatcggggcttcacagctt 7327706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 35389870 - 35389748
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35389870 aaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 35389771  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||||||||||||||    
T  35389770 ttttgaagtatcggggcttcaca 35389748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 22611327 - 22611495
Alignment:
Q  46 acaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgg 145  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||          
T  22611327 acaagtatccgtgcgtatcgggacgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacg------ 22611420  T
Q  146 gaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
        |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22611421 ----tatcgggcaggtatcggtgcaggaaacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 22611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 28704903 - 28704724
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||| ||||| ||| |    
T  28704903 cacaagtatccgtgcgtatcgggatgtatcagaaagtatcggataattattttttaaaaaaataaaatttaatattttgatactctccggatacatattg 28704804  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || ||||||  || |||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  28704803 gaaagtatcggataggtatcagtgcaggatatgcaggggatacggtacgtcatccattttaaagtatcggggcttcacag 28704724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 28882644 - 28882797
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| |||||||||||| |||||       |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||||    
T  28882644 cgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggcatatatcggtg 28882743  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28882744 catgatacgcaggggatacggtacgtcatccattttgaagtatcggagcttcac 28882797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 48122945 - 48122825
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  48122945 aaaaaataaaatttaatatttggatactctctggatacgtatcgggaaatatcgggcatgtatcggtgcaggatatgcaggggatacggtacgtcatcca 48122846  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  48122845 ttttgaagtatcggggcttca 48122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 52505775 - 52505954
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||| ||||| ||| |||||  |||||||||||||||||        ||||||||||||||||||||||||||||| | |||||||||||    
T  52505775 cacaagtatccgtgtgtatcgggatgtatcgaaaagtatcggataattatttttttgaaaaataaaatttaatatttggatactcttcggatacgtatcg 52505874  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    ||||||||||||| | ||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||    
T  52505875 ggaaatatcgggccggtatcggtgcaggatacgca-gggatacagtacatcatccatttttaagtatcggggcttcacagc 52505954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 1679697 - 1679819
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  1679697 aaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcagtggatacggtacgttatccat 1679796  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||    
T  1679797 tttgaagtatcggggcttcacag 1679819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 25937006 - 25937184
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||        |||||||||||||||||||| ||||||||||||||||||||||    
T  25937006 cacaagtatccgtgcgtatcgggatgtatcagaaagtatcggataattaatttttttaaaaataaaatttaatatttagatactctccagatacgtatcg 25937105  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||  ||| |||| |||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||    
T  25937106 gaaagtatcgggcatgtattggtgtaggatacgcaggagatacgatacgtcatccattttaaagtatc-gggcttcacag 25937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 52121331 - 52121175
Alignment:
Q  70 gtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgc 169  Q
    |||||||||||||||| | |||||       |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||| |||  ||||    
T  52121331 gtatcagaaagtatcgaaaaattatttttttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcggacaggtattagtgc 52121232  T
Q  170 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52121231 aggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacagct 52121175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 42464909 - 42465027
Alignment:
Q  105 aataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatttt 204  Q
    ||||||| |||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  42464909 aataaaaattaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacagtacgtcatccatttt 42465008  T
Q  205 gaagtatcggggcttcaca 223  Q
    |||||||||||||||||||    
T  42465009 gaagtatcggggcttcaca 42465027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 55268982 - 55269134
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| ||    ||||| ||    
T  55268982 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagg----tatcgatg 55269077  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55269078 caggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcacagc 55269134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 13748445 - 13748565
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||||||||||| || |||||||||| |||||||||||||||||||| ||||||| ||||||| |||    
T  13748445 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgatacgtcaacca 13748544  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  13748545 ttttgaagtatcggggcttca 13748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 28968663 - 28968511
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||        |||||||||||||||| || ||||||||| | ||||||||||||||| |||||||||| |||||||    
T  28968663 acgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcggt 28968564  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 220  Q
    |||||||||| |  ||||| |||||||||||||||||||||||||||||||||    
T  28968563 gcaggatacgtaaaggatatggtacgtcatccattttgaagtatcggggcttc 28968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 10225104 - 10225274
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| | | |||||  |||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  10225104 cacaagtatccgtgcgtatcggtatgtatcgaaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg 10225203  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    | ||            |||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  10225204 gaaa-----------gtatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 10225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 222
Target Start/End: Complemental strand, 52684358 - 52684200
Alignment:
Q  64 caggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatat 163  Q
    ||||||||||| |||| |||||||||||||        ||||||||||||||||||| |||||||||||  ||||||||||| || |||||| ||| |||    
T  52684358 caggacgtatcggaaaatatcggataattattttttttaaaaataaaatttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtat 52684259  T
Q  164 cggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||||||||||||| | |||||| ||||||||| ||||||||||||||| |||||||    
T  52684258 cggtgcaggatacgcatgagatacgatacgtcatctattttgaagtatcggagcttcac 52684200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 6134357 - 6134500
Alignment:
Q  78 aagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||||||||||       ||||||||| ||||||| || ||||||||||| ||||| ||||||||| |||| || |  |||||||||||||||||    
T  6134357 aagtatcggataattatttttttaaaaaataatatttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggtgcaggatacg 6134456  T
Q  178 caggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  6134457 caggggatacgatacgtcatccattttgaagtatcagggcttca 6134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 41742071 - 41742193
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || |||||||||||||||| |||||||||| |||| || || |||||||||||||||| ||| ||||||  ||||||||||||    
T  41742071 aaaaataaaatttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtgcaggatacacagaggatacaatacgtcatccat 41742170  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    ||||||||||||| |||||||||    
T  41742171 tttgaagtatcggcgcttcacag 41742193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 22289722 - 22289839
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| || ||||||||||| |||||||||| |||| ||||  |||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  22289722 aaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcaggggatacgatacgtcatccattt 22289821  T
Q  204 tgaagtatcggggcttca 221  Q
    |||||||||| |||||||    
T  22289822 tgaagtatcgaggcttca 22289839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 53192608 - 53192491
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||          ||| |||||||||||||||| ||||| |||||||||||||||||    
T  53192608 aaaaaataaaatttaatatttggatactctccggatacgtatcggg----------caggtatcggtgcaggatactcagggtatacggtacgtcatcca 53192519  T
Q  201 ttttgaagtatcggggcttcacagcttc 228  Q
    ||||||||||||||||||||| ||||||    
T  53192518 ttttgaagtatcggggcttcagagcttc 53192491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 42229793 - 42229672
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||||||| | |||||||||| |||| |||||||||| ||||||||||||||||||||||||||   ||||||||| ||    
T  42229793 aaaaataaaatttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatataatacgtcatctat 42229694  T
Q  202 tttgaagtatcggggcttcaca 223  Q
    |||||||||| || ||||||||    
T  42229693 tttgaagtattggagcttcaca 42229672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 30226540 - 30226420
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||  |||||||||| | || |||||||||| |||||||||||||||||||| ||||||| || ||||||||    
T  30226540 aaaaaataaaatttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatcca 30226441  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||  ||||||||    
T  30226440 ttttgaagtatatgggcttca 30226420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 21157694 - 21157849
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||||| ||||||||||||||||       ||||||||||||||||| || ||||||||||| | |||||||| | || |||||||||| ||||  |    
T  21157694 acgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaat 21157793  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    ||||||| | ||| | ||||| ||||||||||||||||||||||| ||||||||||    
T  21157794 gcaggatgcacagagaatacgatacgtcatccattttgaagtatctgggcttcaca 21157849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 983311 - 983202
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||| | |||||||| |||||  |||| ||||||||||| ||||||||||||||    
T  983311 aaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacagatatcagtgcaaaatacacaggggatacgatacgtcatccattt 983212  T
Q  204 tgaagtatcg 213  Q
    |||| |||||    
T  983211 tgaattatcg 983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 2122825 - 2122702
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgc---aggggatacggtacgtcatcc 199  Q
    ||||||||||||||| || |||| |||||| ||||||||||||||| |||| ||||  |||||||||| |||||||   |||||||||  ||||||||||    
T  2122825 aaaataaaatttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgatacgcaggaggggatacaatacgtcatcc 2122726  T
Q  200 attttgaagtatcggggcttcaca 223  Q
    ||||||||||||||||||||||||    
T  2122725 attttgaagtatcggggcttcaca 2122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 7899717 - 7899837
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | ||||||||||||||||||||  |||||||| ||||||||||||| | | |||||  | |||||||||    
T  7899717 aaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaaatatcaagcagatataggtgcaggatacgtaagagatacatttcgtcatcca 7899816  T
Q  201 ttttgaagtatcggggcttca 221  Q
    ||||||||||||| |||||||    
T  7899817 ttttgaagtatcgaggcttca 7899837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 19879139 - 19879213
Alignment:
Q  149 atatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  19879139 atatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtattgcggcttcaca 19879213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 45 - 226
Target Start/End: Complemental strand, 1528667 - 1528497
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  ||  |||| |||| |||||||||||||       ||||| |||||||||||||||||||||||||| |||||||||||    
T  1528667 cacaagtatccgtgcgtatcgagatatatcggaaaatatcggataattatttttttaaaaa-taaaatttaatatttggatactctccggatacgtatcg 1528569  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||          ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||    
T  1528568 gg----------caggtatcgatgcatgatacgcaggggatatgatacgtcatccattttgaagtatcggagcttcagagct 1528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 30787562 - 30787683
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||| ||||||||||| ||| | ||   ||  |||| || |||||||||||||||||||| ||||||||| |||    
T  30787562 aaaataaaatttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatcagtacaggatacgcaggggatacgatacgtcatcgatt 30787661  T
Q  203 ttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||    
T  30787662 ttgaagtatcggggcttcacag 30787683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 29915959 - 29915859
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||| ||| ||||||||||||||| |||| | ||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttcac 29915860  T
Q  223 a 223  Q
    |    
T  29915859 a 29915859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 29965112 - 29965012
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||| ||| ||||||||||||||| |||| | ||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttcac 29965013  T
Q  223 a 223  Q
    |    
T  29965012 a 29965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 38889101 - 38889200
Alignment:
Q  124 atactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    ||||||||| |||||||||||| || |||| |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||    
T  38889101 atactctcctgatacgtatcggaaattatcaggcagatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaagtatcagggcttcaca 38889199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 45347451 - 45347296
Alignment:
Q  68 acgtatcagaaagtatcggataatta-nnnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcgg 166  Q
    ||||||||| ||||||||||||||||        ||||||||||||||||| || ||||||||| | |||||||||||  || |||||||||| |||| |    
T  45347451 acgtatcaggaagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatcag 45347352  T
Q  167 tgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||| |||||||||||| || |||| ||||||||||||||||| |||||||||    
T  45347351 tgcaggata-gcaggggatacgata-gtcaaccattttgaagtatcggagcttcacag 45347296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 33240070 - 33239992
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgca 179  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||    
T  33240070 aaaaaataaaatataatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcgatgcaggatacgca 33239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 2567365 - 2567508
Alignment:
Q  70 gtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgc 169  Q
    ||||| ||||||||||||||||||       |||||||||||||||||||| ||||||||||  |||||||||||||||            |||||||||    
T  2567365 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatattcggatactctctggatacgtatcgggaa-----------gtatcggtgc 2567453  T
Q  170 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||  |||||||    
T  2567454 aggatacgcaggaaatacgatacgtcatccattttgaagtatcgggatttcacag 2567508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 3983817 - 3983690
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| | ||  |||||||||||||||| | | |||||| ||||||||||||    
T  3983817 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaagtatcggtgcaggatacacggaggatacagtacgtcatcca 3983718  T
Q  201 ttttgaagtatcggggcttcacagcttc 228  Q
    |||  ||||||  | |||||| ||||||    
T  3983717 tttaaaagtatatgagcttcatagcttc 3983690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 45532979 - 45533058
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcagg 181  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||| |||||||| ||||||    
T  45532979 aaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcgatgcaggattcgcagg 45533058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 25700878 - 25700759
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||| |||||||||  |||| |||| ||||| |||||||||||||||||||| ||||||  ||  |||||||      
T  25700878 aaaataaaatttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcggtgcaggatacgcagaggatacaatatatcatcca-- 25700781  T
Q  203 ttgaagtatcggggcttcacag 224  Q
    ||||||||||| ||||||||||    
T  25700780 ttgaagtatcgaggcttcacag 25700759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 19420961 - 19420904
Alignment:
Q  165 ggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19420961 ggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcac 19420904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 47642077 - 47642017
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  47642077 tatcggtgcaggatacgcatgggatacggtacgtcatccattttgaagtatcgaggcttca 47642017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 13353233 - 13353296
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcg 213  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||    
T  13353233 tatcgggcagatatcggcgcaggatacgcaggagatacgatacgtcatccattttaaagtatcg 13353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 19421569 - 19421465
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| | ||| |||||||    
T  19421569 acgtatcgggaagtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcggt 19421470  T
Q  168 gcagg 172  Q
    |||||    
T  19421469 gcagg 19421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 47750937 - 47750997
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagta 210  Q
    ||||| |||| |||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  47750937 tatcgagcagctatcggtgcaggatacgcagaggatatagtacgtcatccattttgaagta 47750997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 19349637 - 19349708
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||| |||| ||||||| ||| |||| |||||| ||||||| ||||||||||||||||| ||||||    
T  19349637 tatcgggcaggtatcagtgcaggttacacaggagatacgatacgtcaaccattttgaagtatcggagcttca 19349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 21006534 - 21006605
Alignment:
Q  152 tcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||| ||||| |||| |||||||| | |||| | |||||||| |||||||||||||||||||||||||    
T  21006534 tcgggcaggtatcgatgcaagatacgcatgagatatgatacgtcattcattttgaagtatcggggcttcaca 21006605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 33238759 - 33238720
Alignment:
Q  185 tacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33238759 tacggtacgtcatccattttgaagtatcggggcttcacag 33238720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 20510155 - 20510265
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| ||  |||| ||||  ||||||||| || || ||||   ||| ||||||| || |||||||| |||||||| | ||||||||||    
T  20510155 aaaaataaaatttaatcttcagatattctcttgatacgtattggaaagtatcaaacaggtatcggtacaagatacgcacgggatacgatgcgtcatccat 20510254  T
Q  202 tttgaagtatc 212  Q
    |||||||||||    
T  20510255 tttgaagtatc 20510265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 39664078 - 39663968
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||| ||||| || | ||||| | | |||||||||||| || |||||| ||| |||||||||||||||||||| | |||   ||| ||| |||    
T  39664078 aaaaaataaaaattaatcttcgaatactattctgatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaacca 39663979  T
Q  201 ttttgaagtat 211  Q
    |||||||||||    
T  39663978 ttttgaagtat 39663968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 49419295 - 49419245
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 211  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  49419295 tatcgatgcaggatacgcaagggatacgatacgtcatccattttgaagtat 49419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 5271589 - 5271489
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||          | ||||||| ||||||||||| ||||||| ||| |||||| |    
T  5271589 aaaaaataaaatttaatctccggatactctcctgatacgtatcgggaa----------ggtatcggttcaggatacgcaagggatacagtatgtcatcta 5271500  T
Q  201 ttttgaagtat 211  Q
    |||||||||||    
T  5271499 ttttgaagtat 5271489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 45057253 - 45057308
Alignment:
Q  124 atactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgca 179  Q
    ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||    
T  45057253 atactctcatgatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgca 45057308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 13330944 - 13331044
Alignment:
Q  119 tttggatactctccagatacgtatcgggaa--atatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 216  Q
    |||||||||||| | |||||||||| ||||  ||||||||||| ||||||||||||||       ||||||| || || ||  |||||||||||||||||    
T  13330944 tttggatactcttctgatacgtatcaggaagtatatcgggcaggtatcggtgcaggat-------ggatacgatatgttataaattttgaagtatcgggg 13331036  T
Q  217 cttcacag 224  Q
    ||||||||    
T  13331037 cttcacag 13331044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 32707773 - 32707952
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  32707773 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 32707872  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32707873 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 32707952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 39690705 - 39690884
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||| ||| ||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||     
T  39690705 cacaagtatctgtgtgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatca 39690804  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39690805 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 39690884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 33829925 - 33829753
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||| |||||||||||    
T  33829925 cacaagtatccgtgcgtaccaggatgtatcagaaagtatcggataattattt----aaaaaaaaaaatttaatatttggatactctccggatacgtatcg 33829830  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33829829 ggaagtatcaggcatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 33829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 30777484 - 30777645
Alignment:
Q  66 ggacgtatcagaaagtatcggataatta-nnnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatc 164  Q
    ||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  30777484 ggacgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatc 30777583  T
Q  165 ggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  30777584 ggtgcaggatacgcaagggatacgatacgtcatccattttgaagtatcggggcttcacagct 30777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 1639781 - 1639903
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  1639781 aaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccat 1639880  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||    
T  1639881 tttgaagtatcggggcttcacag 1639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 32625053 - 32624875
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  ||  |||| ||||||||||||||||||       |||||||||||||||||||||||||||||| |  ||||||||||    
T  32625053 cacaagtatccgtgcgtatcgagatatatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactcttcgaatacgtatcg 32624954  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||| |||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  32624953 ggaagtatcgggcaggtatcgatgcaagatacacaggggatacggtacgtcatccattttgaaatatcggggcttcaca 32624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 41392654 - 41392830
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||| ||| ||||         ||||||||||||||||||||||||||| || ||||| |||||    
T  41392654 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcagattattatttttttttaaaataaaatttaatatttggatactccccggatacatatcg 41392753  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  41392754 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatctggacttca 41392830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 9792439 - 9792315
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  9792439 aaaaaataaaatttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcgatgcaggatacacaggggatacggtacgtcatcca 9792340  T
Q  201 ttttgaagtatcggggcttcacagc 225  Q
    |||| ||||||||||||||||||||    
T  9792339 ttttaaagtatcggggcttcacagc 9792315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 30284607 - 30284725
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30284607 aaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccatt 30284706  T
Q  203 ttgaagtatcggggcttca 221  Q
    |||||||||||| ||||||    
T  30284707 ttgaagtatcggagcttca 30284725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 10656938 - 10656817
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||  |||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10656938 aaaaaataaa--ttaatatttggatactctcccgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatcca 10656841  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||| |||||||||||||||||||    
T  10656840 ttttaaagtatcggggcttcacag 10656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 26716426 - 26716270
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||| | ||||||||||||||| |||| ||||| |||||||    
T  26716426 acgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggt 26716327  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  26716326 gtaggatacgcaggggatacgatacgtcatccattttgaagtatcgaggcttcacag 26716270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 26986166 - 26986010
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||| | ||||||||||||||| |||| ||||| |||||||    
T  26986166 acgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggt 26986067  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  26986066 gtaggatacgcaggggatacgatacgtcatccattttgaagtatcgaggcttcacag 26986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 30918494 - 30918376
Alignment:
Q  105 aataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatttt 204  Q
    ||||||| ||||||||| ||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  30918494 aataaaaattaatattttgatactctccgaatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccatttt 30918395  T
Q  205 gaagtatcggggcttcaca 223  Q
    |||||||||||||||||||    
T  30918394 gaagtatcggggcttcaca 30918376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 11906337 - 11906220
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||| ||||  ||||||||||||    
T  11906337 aaaaataaaatttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccat 11906238  T
Q  202 tttgaagtatcggggctt 219  Q
    |||||||||||| |||||    
T  11906237 tttgaagtatcgaggctt 11906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 1795512 - 1795390
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||||||||||| || |||||||||| ||||||||||||||||| |||||||||| ||||||| |||    
T  1795512 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacggaggggatacgatacgtcaacca 1795413  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||||||||||||||    
T  1795412 ttttgaagtatcggggcttcaca 1795390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 32728707 - 32728830
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||  ||| ||||| |    
T  32728707 aaaaaataaaatctaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcgatgcaagatacgcaggggatacaatacatcatcaa 32728806  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||||| |||||||||    
T  32728807 ttttgaagtatcggagcttcacag 32728830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 26691769 - 26691618
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||||  ||||||||||||||| |||| | ||| |||||||    
T  26691769 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggt 26691670  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 219  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  26691669 gcagaatacgcaggggatacgatacgtcatctattttgaagtatcggggctt 26691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 26794946 - 26795116
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| | | |||||  |||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  26794946 cacaagtatccgtgcgtatcggtatgtatcgaaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg 26795045  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    | ||            |||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  26795046 gaaa-----------gtatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatcagggcttcacagct 26795116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 26961501 - 26961350
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||||  ||||||||||||||| |||| | ||| |||||||    
T  26961501 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggt 26961402  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 219  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  26961401 gcagaatacgcaggggatacgatacgtcatctattttgaagtatcggggctt 26961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 12852228 - 12852116
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||           ||||||||||||||||||||||||||||||||||    
T  12852228 aaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgg-----------tgcaggatacgcaggggatacggtacgtcatcca 12852140  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  12852139 ttttgaagtatcggggcttcacag 12852116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 17138252 - 17138370
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||| ||||| ||||||||||||||| |||| ||||  |||||||||||||||||||||||||||  ||||||||| |    
T  17138252 aaaaaataaaatttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggtgcaggatacgcaggggatac-atacgtcatcta 17138350  T
Q  201 ttttgaagtatcggggcttc 220  Q
    ||||||||||||||||||||    
T  17138351 ttttgaagtatcggggcttc 17138370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 22774664 - 22774552
Alignment:
Q  111 atttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagta 210  Q
    |||||||||||||||||||||  |||||||||||| || |||||||||||||||||||||||||| |||||||||||| |||| || ||||||| |||||    
T  22774664 atttaatatttggatactctctcgatacgtatcggaaagtatcgggcagatatcggtgcaggatatgcaggggatacgatacgccaaccattttaaagta 22774565  T
Q  211 tcggggcttcaca 223  Q
    ||| | |||||||    
T  22774564 tcgagacttcaca 22774552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 5612407 - 5612562
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||||| ||||||||||||||||       ||||||||||||||||| || ||||||||||| | |||||||| | || |||||||||| ||||  |    
T  5612407 acgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaat 5612506  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    ||||||| | ||| | ||||| ||||||||||||||||||||||| ||||||||||    
T  5612507 gcaggatgcacagagaatacgatacgtcatccattttgaagtatctgggcttcaca 5612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 14836500 - 14836390
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||| |||| |||||||| ||||||||| | |||||||||||| ||||||||| || |||||| |||||||||||||||||||||  ||||||| ||||    
T  14836500 aaaaaaaaaaattaatattcggatactcttctgatacgtatcggaaaatatcggacaaatatcgatgcaggatacgcaggggatacaatacgtcaaccat 14836401  T
Q  202 tttgaagtatc 212  Q
    |||||||||||    
T  14836400 tttgaagtatc 14836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 3934786 - 3934911
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || |||| || || ||||||||| ||||||||||||||||   |||||||||||    
T  3934786 aaaaaataaaatttaatcttcggatactctcctgatacgtatcggtaagtatcaggtaggtatcggtgcgggatacgcaggggatataatacgtcatcca 3934885  T
Q  201 ttttgaagtatcggggcttcacagct 226  Q
    |||| |||||| | ||||||| ||||    
T  3934886 ttttaaagtatggaggcttcatagct 3934911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 42366101 - 42366220
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||| | ||||| || ||||| ||||| |||| |||| |||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| |    
T  42366101 aaaaaataataattaatcttcggatattctcctgataggtattgggaaatatcgggcaggtatcagtgcaggatacgcaggggatacagtacatcatcta 42366200  T
Q  201 ttttgaagtatcggggcttc 220  Q
    ||||||||||| || |||||    
T  42366201 ttttgaagtattggagcttc 42366220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 21251585 - 21251459
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||| || |||| | ||||||| ||||||| ||| | ||| ||||||||||||||||||    
T  21251585 aaaaaattaaatttaatattcggatactctcctgatacgtatcggaaagtatcagacagatattggtgcagaataagtaggagatacggtacgtcatcca 21251486  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||| | ||||| || ||||| |||||    
T  21251485 ttttaatgtatcaggacttcatagctt 21251459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 15066256 - 15066148
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    |||||||||||||||  |  |||||||| | |||||||||||| ||||||||||||||||||||||||| |||| || |||||||| ||| ||||| |||    
T  15066256 aaaataaaatttaatcatctgatactcttccgatacgtatcggaaaatatcgggcagatatcggtgcagaatacacatgggatacgatacatcatctatt 15066157  T
Q  203 ttgaagtat 211  Q
    |||||||||    
T  15066156 ttgaagtat 15066148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 5722106 - 5721985
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||||| ||| |||| |||| | ||| |||||||||  |||| ||||||||||||||||||||||| ||||||||| ||    
T  5722106 aaaaataaaatttaatcttcggatactttcctgatatgtattgagaagtatcgggcatgtatcagtgcaggatacgcaggggatacgatacgtcatcaat 5722007  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    ||| || |||| |||||||||||    
T  5722006 tttaaaatatc-gggcttcacag 5721985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 6243168 - 6243279
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| || ||||           |||||||||||||||| ||||||  ||||||||||||    
T  6243168 aaaaataaaatttaatattcggatactctccggatacgtatcggaaagtatc-----------ggtgcaggatacgcagaggatacaatacgtcatccat 6243256  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    ||||||||||||| |||||||||    
T  6243257 tttgaagtatcggagcttcacag 6243279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 5986066 - 5986152
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatac 187  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | || |||||| || |||||| ||||||||||||||| |||||    
T  5986066 aaaaaataaaatttaatatttggatactctcccaatacgtatcagaaagtatcggacatatatcgatgcaggatacgcaggagatac 5986152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 34032489 - 34032367
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||| ||||  |||| |||||||  | |||||||| ||||| || ||| ||||| |    
T  34032489 aaaaaataaaaattaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatcggtagatgatacgcaagggattcgatacatcatcta 34032390  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    ||||||||||||  |||||||||    
T  34032389 ttttgaagtatcaaggcttcaca 34032367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 12190503 - 12190397
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| | || ||||||||| ||||||||||  ||| |||||| |||||||| ||||||||||||||| ||| || |||| | |||||||    
T  12190503 aaaataaaatttaatctctgaatactctcctgatacgtatcaagaagtatcggacagatatcagtgcaggatacgcagtggacaccgtacat-atccatt 12190405  T
Q  203 ttgaagta 210  Q
    ||||||||    
T  12190404 ttgaagta 12190397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 212  Q
    |||||||||| ||||||||||||||| |||| | ||  ||||| ||||||||||| |||  ||||| |||||||||||||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 3701317 - 3701233
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggata 186  Q
    |||||||||||||||| ||  |||||||||| || || |||| |||| |||| | ||||||||||||||||||||||||||||||    
T  3701317 aaaaataaaatttaatcttcagatactctcctgaaacatatcaggaagtatcagacagatatcggtgcaggatacgcaggggata 3701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 35746271 - 35746371
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||||||| |||||||||||| || |||  ||||| ||||| |||| |||||| ||| |||||  ||||||||| ||||||||||||||| |||||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcaggtatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatcggagcttcac 35746370  T
Q  223 a 223  Q
    |    
T  35746371 a 35746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 1920953 - 1920864
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacg 193  Q
    |||| ||||||||| || |||||||||||  |||||||||||||| ||||  ||||||||||||||| ||||||||  |||||| |||||    
T  1920953 aaatgaaatttaatcttcggatactctcccaatacgtatcgggaagtatcatgcagatatcggtgcatgatacgcaatggataccgtacg 1920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 9653885 - 9653804
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggg 182  Q
    |||||||||||||||||  |   ||||||| | ||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  9653885 aaaaaataaaatttaatcatccaatactcttccgatacgtatcgggaagtatcgggcaaatatcggtgcagaatacgcaggg 9653804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 19102463 - 19102585
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||  | | ||||||| | |||||||||||||| ||||||| ||||||||  || ||||||   |    ||||||||||||||| |    
T  19102463 aaaaaataaaatttaattgtcgtatactcttctgatacgtatcgggacatatcggacagatatcaatgtaggatatatatctaatacggtacgtcatcaa 19102562  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||||| | ||||||||    
T  19102563 ttttgaagtatctgtgcttcaca 19102585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 7629119 - 7629070
Alignment:
Q  172 gatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  7629119 gatacgcaggggatacgatacgtcatccattttgaggtatcagggcttca 7629070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 224
Target Start/End: Original strand, 43357724 - 43357885
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || |||||||||    ||||||||||| || |||| | ||| |||||||    
T  43357724 acgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttttaatacgtatcggaaagtatcagacaggtatcggt 43357823  T
Q  168 gcaggatacgcaggggatac-----ggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||||||||  |||| ||||       ||| ||| ||||||| |||||||||||||||||||    
T  43357824 gcaggatacatagggaatacaatataatacatcaaccattttaaagtatcggggcttcacag 43357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 27938302 - 27938170
Alignment:
Q  78 aagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||||||||||       ||||||||||||||||| || ||||||||| | |||||  |     | |||||| |||  |||||||||| ||||||    
T  27938302 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatactgac----acatatcgagcatgtatcggtgcatgatacg 27938207  T
Q  178 caggggatacggtacgtcatccattttgaagtatcgg 214  Q
    || | |||||  |||||||||||||||||||||||||    
T  27938206 catgagatacaatacgtcatccattttgaagtatcgg 27938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 7977361 - 7977316
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcggg 146  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  7977361 aaaaaataaaatttaatatttagatactctccgaatacgtatcggg 7977316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 18001930 - 18002036
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| ||||||||| ||||||||       ||||||||||||||||| ||   ||||||||| |||| |||||||||| |||   |||| ||||| |    
T  18001930 acgtatcggaaagtatcagataattatttttaaaaaaaataaaatttaatcttcaaatactctcctgatatgtatcgggaagtat---gcaggtatcgat 18002026  T
Q  168 gcaggatacg 177  Q
    ||||||||||    
T  18002027 gcaggatacg 18002036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 27085483 - 27085409
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatac 176  Q
    |||||||||||||||| |  ||||||||||  |||||||||||| || ||||  |||||||||||| || |||||    
T  27085483 aaaaataaaatttaatttccggatactctcttgatacgtatcggaaagtatcatgcagatatcggtacatgatac 27085409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 7629177 - 7629132
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaa 148  Q
    ||||||||||||||| ||  |||||||||| |||||||||||||||    
T  7629177 aaaataaaatttaatcttcagatactctcctgatacgtatcgggaa 7629132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 19738873 - 19738698
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  19738873 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 19738774  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 220  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19738773 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 19738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 52122811 - 52122990
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  52122811 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 52122910  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52122911 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttcacag 52122990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 8064051 - 8064227
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  8064051 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 8064150  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8064151 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 8064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 5325663 - 5325839
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| |||||  ||| |||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  5325663 cacaagtatccgtgcgtatcgggatgtatcgaaaaatatcggataattattttttttaaaaataaaatttaatatttggatactctccagatacgtatcg 5325762  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  5325763 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttca 5325839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 53322513 - 53322335
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  53322513 cacaagtatccgtgcgtatcgggacatatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg 53322414  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||| ||||| || | |||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  53322413 ggaagtatcgagccggtatcagtgcaggatacgcaaaggatacgatacgtcatccattttgaagtatcggggcttcaca 53322335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 5834950 - 5834824
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5834950 aaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagcatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 5834851  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||||| ||||||||||||    
T  5834850 ttttgaagtatcggagcttcacagctt 5834824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 52721417 - 52721258
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  52721417 acgtatcggaaagtatcggataattattttataaaaaaataaaatttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggt 52721318  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagcttc 228  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||  |||||||| ||||||    
T  52721317 gcaggatacgcaggggatacgatacgtcatctattttgaagtat-tgggcttcagagcttc 52721258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 28377172 - 28376993
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||| || |||||  ||||||| ||| |||||       |||||||||||||||||||||||||||||||| | |||||||||    
T  28377172 cacaagtatccgtgcgtatcaagaagtatcgaaaagtattggaaaattattttcttaaaaaataaaatttaatatttggatactctcccggtacgtatcg 28377073  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
      || ||||||| || |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  28377072 aaaagtatcgggtaggtatcggtgcaggatacacaggagatacgatacgtcatccattttgaagtatcggggcttcacag 28376993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 41145731 - 41145609
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||    
T  41145731 aaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatcggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccat 41145632  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||    
T  41145631 tttgaagtatcggggcttcacag 41145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 42472568 - 42472690
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||  |||||||||||||||||||||| |||| |||||||||||||    
T  42472568 aaaaataaaatttaatatttggatactctccggatacgtattgggaagtatcgggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccat 42472667  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||| ||||||||    
T  42472668 tttgaagtatcgggacttcacag 42472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 3403528 - 3403694
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||| |||| ||| ||||| ||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||    
T  3403528 cacaagtatccgtgcatatc-ggatgtatcggaaagtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcg 3403626  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    ||||          |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  3403627 ggaa----------gatatcagtgcaggatacacaggggatacggtacgtcatccattttgaagtattggggcttcac 3403694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 38492267 - 38492377
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||          ||| ||||||||||||||||||||||||||| ||||||||||||    
T  38492267 aaaaaataaaatttaatatttggatactctccggatacgtatcggg----------caggtatcggtgcaggatacgcaggggatacagtacgtcatcca 38492356  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  38492357 ttttgaagtatcggggcttca 38492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 47607226 - 47607107
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| ||  ||| |||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||| || |||||||||||    
T  47607226 aaataaaatttaatcttcagatgctctcctgatacgtatcaggaaatatcaggcagatatcg-tgcaggatacgcaggagatacgatatgtcatccattt 47607128  T
Q  204 tgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||    
T  47607127 tgaagtatcggggcttcacag 47607107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 36511898 - 36512052
Alignment:
Q  68 acgtatcagaaagtatcggataatta-nnnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcgg 166  Q
    ||||||||| ||||||||||||||||        ||||||||||||||||| || ||||||||| | |||||||||||| || |||||||||  ||||||    
T  36511898 acgtatcaggaagtatcggataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcgg 36511997  T
Q  167 tgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
     |||||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  36511998 cgcaggatacgcacgggatacaatacgtcaaccattttgaagtatcggggcttca 36512052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 40694190 - 40694070
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| ||  |||||||||| ||||||||||||||| ||||   ||| ||||||||||| ||||||| |||||||| ||| |||||||    
T  40694190 aaaaaataaaatttaatcttcagatactctcctgatacgtatcgggaagtatcaatcaggtatcggtgcagaatacgcatgggatacgatacatcatcca 40694091  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  40694090 ttttgaagtatcggggcttca 40694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 17892366 - 17892248
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||| | ||||| ||||||||| |||||||||| |||||||| | |||||||| | ||||||||||||| ||||||    
T  17892366 aaaataaaatttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggtgtatgatacgcatgagatacggtacgtcgtccatt 17892267  T
Q  203 ttgaagtatcggggcttca 221  Q
    |||||||||||| ||||||    
T  17892266 ttgaagtatcggagcttca 17892248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 14795083 - 14795018
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14795083 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 14795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 46431933 - 46432053
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||| |||| | ||| ||||| ||||||||| |||| ||||||| |||||||||| ||    
T  46431933 aaaataaaatttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgttgcaggatatgcagaggatacgatacgtcatccgtt 46432032  T
Q  203 ttgaagtatcggggcttcacag 224  Q
    |||||||||| |||||||||||    
T  46432033 ttgaagtatc-gggcttcacag 46432053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 2586456 - 2586336
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| ||| |||||| || ||||||||| | ||||||||| || || |||||||||| | |||||| ||||||| |||||||||||||||||||||||    
T  2586456 aaaaaacaaattttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggtgaaggatactcaggggatacggtacgtcatcca 2586357  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||| ||||||||||||||||    
T  2586356 ttttaaagtatcggggcttca 2586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 21058944 - 21058843
Alignment:
Q  110 aatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagt 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||| ||| ||||||| |||||||| |||||| ||||    
T  21058944 aatttaatctttggatactctccagatacgtatcgggaaatatcagacatgtatcggtgcaggatacacagtggatacgctacgtcattcattttaaagt 21058845  T
Q  210 at 211  Q
    ||    
T  21058844 at 21058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 55901138 - 55901263
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||| | ||| ||||||||||| ||| ||||||| |  |||||||||||||||| ||||||||||| ||||||||| ||    
T  55901138 aaaaataaaatttaatcttcggatattttcctgatacgtatcgagaagtatcgggtatgtatcggtgcaggatacacaggggatacgatacgtcatctat 55901237  T
Q  202 tttgaagtatcggggcttcacagctt 227  Q
    ||| ||||||||||| |||| |||||    
T  55901238 tttaaagtatcggggtttcatagctt 55901263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 1177080 - 1176981
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||| | ||||| |||||| || |||||||||| ||| ||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||||    
T  1177080 ggatactcttctgatacatatcggaaagtatcgggcaggtatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggcttca 1176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 37992531 - 37992653
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| |||||||||||| | |||||||||||| || |||| | ||  |||||||||| ||| |||| |||||||  |||||| ||||    
T  37992531 aaaaaataaaatttaatctttggatactcttctgatacgtatcggaaagtatcagacatgtatcggtgcaagatccgcaagggatacaatacgtcttcca 37992630  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||||||||| ||| ||||||||    
T  37992631 ttttgaagtaccggagcttcaca 37992653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 51858931 - 51858834
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgca-ggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 219  Q
    ||||||||||| ||||||||||||||| |||| | ||| ||||| |||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  51858931 ggatactctcctgatacgtatcgggaagtatcagacaggtatcg-tgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcggggctt 51858834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 39957719 - 39957630
Alignment:
Q  66 ggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgg 155  Q
    ||||||||| ||||||||||||||||||       |||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  39957719 ggacgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatattcggatactctccggatacgtatcgagaagtatcgg 39957630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 10257771 - 10257697
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||||||||| ||||| | ||| |||||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  10257771 tatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaagtatcggggcttcacag 10257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 44121879 - 44121960
Alignment:
Q  140 tatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||| |||||||||| ||||||||||||||||||||  |||||| |||||| |||||||||||||||  ||||||||    
T  44121879 tatcaggaagtatcgggcaggtatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtatgtgggcttca 44121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 21637785 - 21637665
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| |||  |  || ||||  ||||| ||||  ||||| || || ||||||||||    
T  21637785 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtataagagaggtatcaatgcagaatacatagggggtatgggacgtcatcca 21637686  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||| || |||||    
T  21637685 ttttgaagtatctggacttca 21637665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 27981993 - 27981905
Alignment:
Q  124 atactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 212  Q
    ||||||||  |||||||||||  || |||| | |||||||||||| ||||| |||||| |||||| |||||||||||||||||||||||    
T  27981993 atactctcttgatacgtatcgaaaagtatcagacagatatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatc 27981905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 52572364 - 52572210
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||       ||||| ||||||||||||||||||||||||||||              
T  52572364 cacaagtatccgtgcgtattgggacgtatcggaaagtatcggataattatttttttaaaaa-taaaatttaatatttggatactctccag---------- 52572276  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
               |||| |||||||||| ||| | |||||||||||| |||||||||||||| ||||||||||||||||    
T  52572275 -----------gcaggtatcggtgcatgatgcacaggggatacggaacgtcatccattttaaagtatcggggcttca 52572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 4400587 - 4400477
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||| |||| | ||  ||||||| || ||||| |||| |||||| |   |||| |||    
T  4400587 aaaaataaaatttaatattctgatactctcctgatacgtatcgggaagtatcagacaagtatcggttcatgatacacaggagatacgatttatcattcat 4400488  T
Q  202 tttgaagtatc 212  Q
    |||||||||||    
T  4400487 tttgaagtatc 4400477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 31946263 - 31946324
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcac 222  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||  |||||||    
T  31946263 tatcggtgcaggatacgcagggaatacgatacgtcatccattttaaagtatcgaagcttcac 31946324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 44521996 - 44522097
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| |||||||||||| |||||||   ||||||||||||||| ||| ||||| ||||   ||| ||||||||||||||||| |||  |||||    
T  44521996 ggatactctcctgatacgtatcggaaaatatcaaacagatatcggtgcagaatatgcaggagatataatacatcatccattttgaagtaccggaacttca 44522095  T
Q  222 ca 223  Q
    ||    
T  44522096 ca 44522097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 12205837 - 12205794
Alignment:
Q  226 ttcatacaaaatcataatcgctaagctaatattttactactttc 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12205837 ttcatacaaaatcataatcgttaagctaatattttactactttc 12205794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 3109280 - 3109423
Alignment:
Q  78 aagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||||||||||       ||||||||||||||||| || |  || ||| | |||||||||||  ||||||||  ||| ||||||| ||| |||||    
T  3109280 aagtatcggataattatttgtttaaaaaataaaatttaatcttcgattaatcttctgatacgtatcgaaaaatatcgaacaggtatcggtacagaatacg 3109379  T
Q  178 caggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||  | |||||||| || ||||||||| |||||||| |||||||    
T  3109380 caaagaatacggtatgtgatccattttaaagtatcgaggcttca 3109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 51674939 - 51674856
Alignment:
Q  140 tatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||| || |||||| ||  |||| |||||| ||| ||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  51674939 tatcggaaagtatcggacaagtatcagtgcagaatatgcaggagatacgatacgtcatctattttgaagtatcggcgcttcaca 51674856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 14795115 - 14795078
Alignment:
Q  108 aaaatttaatatttggatactctccagatacgtatcgg 145  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  14795115 aaaatttaatatttggatactctccggatacgtatcgg 14795078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 42630485 - 42630537
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgg 155  Q
    ||||||||||||||| || ||||| ||||| |||||||||||| |||||||||    
T  42630485 aaaataaaatttaatcttcggatattctcctgatacgtatcggaaaatatcgg 42630537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 36561772 - 36561838
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagcttc 228  Q
    |||||||||||||||| | ||||||||  || |||||||||||||||||||| | |||||| ||||||    
T  36561772 tatcggtgcaggatacac-ggggatacaataagtcatccattttgaagtatcagagcttcatagcttc 36561838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 726624 - 726654
Alignment:
Q  183 gatacggtacgtcatccattttgaagtatcg 213  Q
    |||||||||||||||||||||||||||||||    
T  726624 gatacggtacgtcatccattttgaagtatcg 726654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 754220 - 754190
Alignment:
Q  183 gatacggtacgtcatccattttgaagtatcg 213  Q
    |||||||||||||||||||||||||||||||    
T  754220 gatacggtacgtcatccattttgaagtatcg 754190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 36943750 - 36943708
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtac 192  Q
    ||||||| || |||||||||||||||| |||||||||||||||    
T  36943750 tatcgggtaggtatcggtgcaggatacacaggggatacggtac 36943708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 24296558 - 24296505
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgg 214  Q
    |||||||| | |||||||||  |||||||||||||||||||||| || ||||||    
T  24296558 tatcggtgtatgatacgcagatgatacggtacgtcatccattttaaactatcgg 24296505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 31226073 - 31226044
Alignment:
Q  101 aaaaaataaaatttaatatttggatactct 130  Q
    ||||||||||||||||||||||||||||||    
T  31226073 aaaaaataaaatttaatatttggatactct 31226044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 36943822 - 36943744
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcggg 146  Q
    ||||||||| ||||||| ||||||||       |||||||||| |||||| || ||||||||| | |||||||||||||    
T  36943822 acgtatcaggaagtatcagataattatttttaaaaaaaataaattttaatcttcggatactcttctgatacgtatcggg 36943744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 8e-67; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 6916816 - 6916997
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  6916816 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 6916915  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6916916 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 6916997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 52895655 - 52895835
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  52895655 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 52895754  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52895755 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 52895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 38330603 - 38330424
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  38330603 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 38330504  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38330503 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 38330424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 1043403 - 1043223
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  1043403 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 1043304  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1043303 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 1043223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 37104296 - 37104120
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||     
T  37104296 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatca 37104197  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37104196 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttca 37104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 28949183 - 28949362
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||| ||| ||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||     
T  28949183 cacaagtatctgtgtgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatca 28949282  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28949283 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 28949362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 1036635 - 1036455
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||||||||| |||||||||||    
T  1036635 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg 1036536  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    | || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  1036535 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatgagggcttcacagc 1036455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 38948908 - 38948729
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |||||||       |||||||||||||||||||||||||| ||| | |||||||||||    
T  38948908 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcgtataattattttttaaaaaaataaaatttaatatttggatattcttcggatacgtatcg 38948809  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
     ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  38948808 agaagtattgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttaaagtatcggagcttcacag 38948729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 20409552 - 20409672
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20409552 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 20409651  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  20409652 ttttgaagtatcggggcttca 20409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 37346846 - 37346969
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37346846 aaaaaataaaatttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatcca 37346945  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||||||    
T  37346946 ttttgaagtatcggggcttcacag 37346969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 3427024 - 3426845
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||     
T  3427024 cacaagtatccgtgcgtatcgggatgtatcgcaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatca 3426925  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||| ||  |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  3426924 ggaagtatcggacatgtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggggcttcacag 3426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 43189775 - 43189652
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  43189775 aaaaaaaaaaatttaatatttggatactctcctgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatcca 43189676  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||| ||||||||    
T  43189675 ttttgaagtatcgggtcttcacag 43189652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 8132303 - 8132180
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||  |||||||||||||||||||||||||||||||||||||| |    
T  8132303 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgaacatgtatcggtgcaggatacgcaggggatacggtacgtcatcta 8132204  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||||| |||||||||    
T  8132203 ttttgaagtatcggagcttcacag 8132180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 30323835 - 30323712
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| | ||||| | |||||||||    
T  30323835 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcagatatcagtgcaggatacacagagaatacgttgcgtcatcca 30323736  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||| ||||    
T  30323735 ttttgaagtatcggggctttacag 30323712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 36367644 - 36367813
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||         
T  36367644 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacg----- 36367738  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
         |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  36367739 -----tatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcaggacttcacag 36367813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 13012990 - 13013115
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||| ||||| ||||||||||| || ||||||||    
T  13012990 aaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcagtgcatgatacacaggggatacgatatgtcatcca 13013089  T
Q  201 ttttgaagtatcggggcttcacagct 226  Q
    ||||||||||| ||||||||||||||    
T  13013090 ttttgaagtattggggcttcacagct 13013115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 5984347 - 5984228
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||  ||||||||||| ||||||||||||||| ||||||||||||    
T  5984347 aaaaaataaaatttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggatacagtacgtcatcca 5984248  T
Q  201 ttttgaagtatcggggcttc 220  Q
    ||||||||||||||||||||    
T  5984247 ttttgaagtatcggggcttc 5984228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 31653400 - 31653523
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| || |||||||| ||| | |||||    
T  31653400 aaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcagatatcggtgcatgatacacaagggatacgatacattatcca 31653499  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||| |||||||||||    
T  31653500 ttttgaagtatcagggcttcacag 31653523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 224
Target Start/End: Complemental strand, 9781795 - 9781639
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       |||||| |||| ||||| || ||||||||| | |||||||||||| || |||||||||| |||||||    
T  9781795 acgtatcgggaagtatcggataattattttaaaaaaaaaaaaaaattaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggt 9781696  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  9781695 gcaggatacgcaggggatacgatacgtcaaccattttgaagtatcagggcttcacag 9781639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 28659265 - 28659409
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| ||| ||||||||||||||       |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||  |||||||    
T  28659265 acgtatcggaacgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcatgtatcggt 28659364  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatc 212  Q
    ||| ||||||||||| |||| |||||||||||||||| |||||||    
T  28659365 gcatgatacgcagggaataccgtacgtcatccattttaaagtatc 28659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 25256736 - 25256614
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||||| |||||| ||||||||||||    
T  25256736 aaaaaataaaatttaatatttgaatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagaggatacagtacgtcatcca 25256637  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    ||||||| |||| | ||||||||    
T  25256636 ttttgaaatatcagagcttcaca 25256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 34432382 - 34432504
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||||||||| |||||||||| |||| |||| |||||||| | ||||| ||||||||||||||||  ||||||||||||    
T  34432382 aaaaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcaggcagataccagtgcatgatacgcaggggatacaatacgtcatccat 34432481  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    ||||||||||||| |||||||||    
T  34432482 tttgaagtatcggagcttcacag 34432504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 2364797 - 2364674
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| | |||||||||||| || ||| |||||| ||||| |||||||||||||||||||| ||||||| |||||    
T  2364797 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgcaggggatatggtacgttatcca 2364698  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    |||||||||||| ||| |||||||    
T  2364697 ttttgaagtatctgggtttcacag 2364674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 14167202 - 14167082
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| || ||||||||| | |||||||||| |||| |||| | ||||||||||||||||||||||||| |||||| || ||||||||||    
T  14167202 aaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccatt 14167103  T
Q  203 ttgaagtatcggggcttcaca 223  Q
    ||||||||||| | |||||||    
T  14167102 ttgaagtatcgagacttcaca 14167082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 29168067 - 29167944
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||| ||||||||| || ||||||||||| |||||||| |||||| ||||  |||| |||||||||||||||||||||||||| | |||||||||||    
T  29168067 aaaaaattaaatttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtgcaggatacgcaggggatatgatacgtcatcca 29167968  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||| | ||||| ||||    
T  29167967 ttttgaagtatggaggctttacag 29167944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 40776115 - 40775997
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || |||||||| || ||||||||||| ||| ||||  |||||||| |||||||||||||||||||||||  |||||| ||||    
T  40776115 aaaaaataaaatttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattggtgcaggatacgcaggggatacattacgtcttcca 40776016  T
Q  201 ttttgaagtatcggggctt 219  Q
    |||||||||||| ||||||    
T  40776015 ttttgaagtatctgggctt 40775997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 10822523 - 10822402
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcgg-tgcaggatacgcaggggatacggtacgtcatcc 199  Q
    ||||||||||||||||| || ||||||||||| || | |||||||||| |||| | |||||||||| |||||||||||||||| ||| | ||||||||||    
T  10822523 aaaaaataaaatttaatcttcggatactctcctgagatgtatcgggaagtatcagacagatatcgggtgcaggatacgcagggaatatgatacgtcatcc 10822424  T
Q  200 attttgaagtatcggggcttca 221  Q
    |||||||||||||| |||||||    
T  10822423 attttgaagtatcgaggcttca 10822402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 2472873 - 2472975
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||||| |||||||||||| || |||| ||||| || |||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  2472873 ggatactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatcggagcttca 2472972  T
Q  222 cag 224  Q
    |||    
T  2472973 cag 2472975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 32381057 - 32381175
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||||| ||||||||| ||||| |||| | || |||| |||||| |||| |||||||||||||||  |||||||    
T  32381057 aaaaaataaaatttaatcttcggatactctcctgatacgtattgggaagtatcagacaaatattggtgcatgatatgcaggggatacggtatatcatcca 32381156  T
Q  201 ttttgaagtatcggggctt 219  Q
    |||| ||||||||||||||    
T  32381157 ttttaaagtatcggggctt 32381175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 48715227 - 48715345
Alignment:
Q  105 aataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatttt 204  Q
    ||||||||||||| || ||| ||||||| ||||||||||||||| |||||||| | |||||||| |||||||||||| |||||| |||   |||||||||    
T  48715227 aataaaatttaatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgtaggatacgcaggagatacgatacaatatccatttt 48715326  T
Q  205 gaagtatcggggcttcaca 223  Q
    |||||||||||| ||||||    
T  48715327 gaagtatcggggtttcaca 48715345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 3708284 - 3708399
Alignment:
Q  108 aaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 207  Q
    ||||||||||||| | ||||||||| |||||||||||  || |||||||||  ||| |||| |||||| |||| ||||||| ||||||||||||||||||    
T  3708284 aaaatttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcatccattttgaa 3708383  T
Q  208 gtatcggggcttcaca 223  Q
    ||||||||| ||||||    
T  3708384 gtatcggggtttcaca 3708399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 41675987 - 41676105
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || ||||||||| |  |||| |||  |||| |||||| ||| |||||||||| |||||||||| ||||||||||||||||||    
T  41675987 aaaaaataaaatttaatcttcggatactcttccaatacatattaggaagtatcggacaggtatcggtgcatgatacgcaggagatacggtacgtcatcca 41676086  T
Q  201 ttttgaagtatcggggctt 219  Q
    |||| || |||||||||||    
T  41676087 ttttaaaatatcggggctt 41676105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 34096550 - 34096673
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| ||| |||||| ||  |||||||| | ||| |||||  | || ||||| ||||||||||||||||||||||||||||||||| |||||||  ||    
T  34096550 aaaaaaaaaagtttaatcttcagatactcttctgatgcgtattagaaagtatcgcgcagatatcggtgcaggatacgcaggggatacgatacgtcaatca 34096649  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||| ||||||||||||||||    
T  34096650 ttttgaaatatcggggcttcacag 34096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 14334280 - 14334167
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| | |||||| ||| ||||||||||            ||||||||||||||||||    
T  14334280 aaaaaataaaatttaatatttggatactctcccaatacgtatcggggagtatcggacaggtatcggtgca-----------agatacggtacgtcatcca 14334192  T
Q  201 ttttgaagtatcggggcttcacagct 226  Q
    |||||||||||| |||||||||||||    
T  14334191 ttttgaagtatc-gggcttcacagct 14334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 10763778 - 10763668
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||| |||| ||||| || ||||||||| | ||||||||||   ||||||||||||||||| ||||||||||  |||||||||||| ||||||| ||||    
T  10763778 aaaaaaaaaaattaatcttcggatactcttctgatacgtatcaaaaaatatcgggcagatattggtgcaggat--gcaggggatacgatacgtcaaccat 10763681  T
Q  202 tttgaagtatcgg 214  Q
    ||| |||||||||    
T  10763680 tttaaagtatcgg 10763668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 29861900 - 29861799
Alignment:
Q  122 ggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||| | |||||||||||| || |||||||||| | | |||||| |||||| ||| |||||  ||||||| ||||||||||||||||||||||||    
T  29861900 ggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatcggggcttca 29861801  T
Q  222 ca 223  Q
    ||    
T  29861800 ca 29861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 24849412 - 24849362
Alignment:
Q  173 atacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  24849412 atacgcaggggatacggtacgtcatctattttgaagtatcggagcttcaca 24849362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 37922387 - 37922265
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| ||| ||||||||||  | || ||||| ||| ||||  |||||||| | ||||||||| ||| | ||||| ||||||| ||||    
T  37922387 aaaaaataaaatttaatctttagatactctcctaacacatatcgagaagtatcaagcagatattgatgcaggatatgcatgagatacagtacgtcgtcca 37922288  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||| || |||||| ||||||||    
T  37922287 ttttaaaatatcggagcttcaca 37922265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 2222980 - 2223097
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| ||  |||||||||| |||||||||||| ||||||| | ||| |||||||| ||||||| || |  ||||| ||| ||||| ||||    
T  2222980 aaataaaatttaatcttcagatactctcctgatacgtatcggaaaatatcagacaggtatcggtgtaggatacacatgaaatacgttacatcatctattt 2223079  T
Q  204 tgaagtatcggggcttca 221  Q
    | ||||||| | ||||||    
T  2223080 taaagtatctgagcttca 2223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 24590166 - 24590233
Alignment:
Q  154 gggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||| |||| |||||||||||||| || |||||||||| ||||| |||||||||||||| ||||||    
T  24590166 gggcaggtatcagtgcaggatacgcaaggaatacggtacgccatcccttttgaagtatcggcgcttca 24590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 38218447 - 38218404
Alignment:
Q  172 gatacgcaggggatacggtacgtcatccattttgaagtatcggg 215  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  38218447 gatacgcaagggatacggtacgtcatccattttgaagtatcggg 38218404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 15417570 - 15417453
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    ||||||||||||||  |  |||||||| | |||| |||||| ||| ||||||||| |||||| ||||| |||||||| | ||| | ||| ||||||||||    
T  15417570 aaataaaatttaatgatctgatactcttccgatatgtatcgagaagtatcgggcatatatcgatgcagaatacgcagagaatatgatacatcatccattt 15417471  T
Q  204 tgaagtatcggggcttca 221  Q
    | ||||||| || |||||    
T  15417470 taaagtatctggacttca 15417453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 9528859 - 9528943
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 207  Q
    |||||| ||| ||||||||||||||| ||||   ||| |||||||||| ||||| || |||||||  ||||||||||||||||||    
T  9528859 gatactatcccgatacgtatcgggaagtatcaaacaggtatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 33039730 - 33039618
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    ||||| |||||||| || ||||||||||  ||||  ||||||| | ||| |  ||| ||||||||||||||||||| |||||||  || || ||||||||    
T  33039730 aaatataatttaattttcggatactctcttgatatatatcggggagtattgaacaggtatcggtgcaggatacgcaagggatacaatatgttatccattt 33039631  T
Q  204 tgaagtatcgggg 216  Q
    | |||||||||||    
T  33039630 taaagtatcgggg 33039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 36551540 - 36551492
Alignment:
Q  172 gatacgcaggggatacggtacgtcatccattttgaagtatcggggcttc 220  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||    
T  36551540 gatacgcaggggagacagtacgtcatcaattttgaagtatcggggcttc 36551492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 24851626 - 24851524
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| | ||||||||||||||||       ||||||||||||||||| |||||||||||||  |||| ||||  |||| |||| | ||| ||||||||    
T  24851626 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatctttggatactctcttgatatgtattaggaagtatcagacaggtatcggtg 24851527  T
Q  169 cag 171  Q
    |||    
T  24851526 cag 24851524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 5368660 - 5368584
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacg 177  Q
    ||||||||| ||| ||| || ||||||||||||||||||||| |   |||||| | || |||||| |||||||||||    
T  5368660 aaaaaataagattcaattttcggatactctccagatacgtattgaagaatatcagacatatatcgatgcaggatacg 5368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 47654742 - 47654706
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcat 197  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  47654742 tatcggtgcagaatacgcaggggatacgatacgtcat 47654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 1036768 - 1036947
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||| |||||||||| |||||||||||    
T  1036768 cacaagtatccgtgcgtatcgggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcg 1036867  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1036868 gaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 1036947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 31195811 - 31195977
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||| ||||||||| ||| ||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  31195811 cacaagtatctgtgcgtatcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccagatacgtatcg 31195910  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 211  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31195911 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 8357134 - 8356958
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||| | |||||||||||    
T  8357134 cacaagtattcgtgcgtatcgagacgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcg 8357035  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  8357034 ggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcaggacttca 8356958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 3212597 - 3212473
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || || ||||| |||||||||||    
T  3212597 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcagatatcggtgcaggatacacaaggaatacgatacgtcatcca 3212498  T
Q  201 ttttgaagtatcggggcttcacagc 225  Q
    |||||||||||||||||||||||||    
T  3212497 ttttgaagtatcggggcttcacagc 3212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 32130657 - 32130779
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||| ||    
T  32130657 aaaaaataaaatttaatatttggatactctcctgatacgtatcgggaaatatcgaacaggtatcagtgcaggatacgcaggggatacggtacgtcattca 32130756  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||| ||||||||||||||||||    
T  32130757 ttttaaagtatcggggcttcaca 32130779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 7188778 - 7188900
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||   |||||||    
T  7188778 aaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggta---catccat 7188874  T
Q  202 tttgaagtatcggggcttcacagctt 227  Q
    |||||||||||||||||||| |||||    
T  7188875 tttgaagtatcggggcttcagagctt 7188900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 27084102 - 27083982
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| ||||||||||||||  |||||||| ||||| ||| | |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  27084102 aaataaaatttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattt 27084003  T
Q  204 tgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||    
T  27084002 tgaagtatcggggcttcacag 27083982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 25834494 - 25834616
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||  |||| |||||||||||||| |||||||| |||||||||||    
T  25834494 aaaaaataaaatttaatatttggatactgtcctgatacgtatcgagaaatatcaggcatgtatcagtgcaggatacgcacgggatacgatacgtcatcca 25834593  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
     ||||||||||||||| ||||||    
T  25834594 atttgaagtatcggggtttcaca 25834616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 26327273 - 26327152
Alignment:
Q  102 aaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccat 201  Q
    |||||||||||||||| || ||||||||||   |||||||||||||| |||||||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  26327273 aaaaataaaatttaatcttcggatactctctt-atacgtatcgggaagtatcgggcaggtatcggtgcaggatacacaggagatacgatacgtcatccat 26327175  T
Q  202 tttgaagtatcggggcttcacag 224  Q
    |||||||||||||||||||||||    
T  26327174 tttgaagtatcggggcttcacag 26327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 32018097 - 32017986
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||||||   ||||||| | ||||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32018097 aaaaaataaaatttaatattcatatactctacggatacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatcca 32017998  T
Q  201 ttttgaagtatc 212  Q
    ||||||||||||    
T  32017997 ttttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 234426 - 234300
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| |||| ||||| || ||||||||| | |||||||||||| || |||||||||| ||||||||||||||||||||| |||||| ||||||| |||    
T  234426 aaaaaaaaaaagttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggagatacgatacgtcaacca 234327  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    ||||||||||||||||||||| |||||    
T  234326 ttttgaagtatcggggcttcagagctt 234300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 3299259 - 3299139
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||||||||||| |||  |||||||||||||||||||||| |||||||  |||| ||||||||||||||| |||| ||||||||||| ||||| |||    
T  3299259 aaaataaaatttaatctttaaatactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctatt 3299160  T
Q  203 ttgaagtatcggggcttcaca 223  Q
    |||||||||| ||||||||||    
T  3299159 ttgaagtatcagggcttcaca 3299139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 19128306 - 19128153
Alignment:
Q  68 acgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggt 167  Q
    ||||||| | ||||||||||||||||       ||||||||||||||||| || ||||||||| | |||||||||||| || |||||||| | ||| |||    
T  19128306 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggt 19128207  T
Q  168 gcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    ||||||||| ||||||||||| ||||||| ||||||| |||||| || ||||||    
T  19128206 gcaggatacacaggggatacgatacgtcaaccattttaaagtattggagcttca 19128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 29893047 - 29892966
Alignment:
Q  140 tatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||    
T  29893047 tatcgggaaatatcggacagatatcgatgcaggatacgcaggggatacagtacatcatccattttaaagtatctgggcttca 29892966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 10894584 - 10894694
Alignment:
Q  104 aaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 203  Q
    |||||||||||||| |||||||||||||| |||||||||| ||          ||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  10894584 aaataaaatttaatctttggatactctcctgatacgtatcagg----------caggtatcggtgcatgatacgc-ggggatacggtacgtcatccattt 10894672  T
Q  204 tgaagtatcggggcttcacagc 225  Q
    ||||||||| ||||||||||||    
T  10894673 tgaagtatcagggcttcacagc 10894694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 6708041 - 6708161
Alignment:
Q  103 aaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccatt 202  Q
    ||||||| ||||||| || ||||||||||| ||||| ||| || || |||| || || |||||||||| ||||| ||||||||||  || ||||||||||    
T  6708041 aaaataatatttaatcttcggatactctcctgatacatattggaaagtatcaggaaggtatcggtgcatgatacacaggggatacaatatgtcatccatt 6708140  T
Q  203 ttgaagtatcggggcttcaca 223  Q
    || ||||||||||||||||||    
T  6708141 ttaaagtatcggggcttcaca 6708161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 13061325 - 13061417
Alignment:
Q  123 gatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggg 215  Q
    ||||||||||  ||||||||| | || |||| ||||||||||| |||||||||||||| | ||| |||||||||| |||||||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcagatatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatcggg 13061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 13607795 - 13607903
Alignment:
Q  113 ttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 212  Q
    ||||| || ||||||||||| |||||||||| | || |||  ||||| |||| |||||||||| |||| ||||||| |||||||||||||||||||||||    
T  13607795 ttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T
Q  213 ggggcttca 221  Q
     ||| ||||    
T  13607895 agggattca 13607903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 31079672 - 31079612
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||    
T  31079672 tatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggagcttca 31079612  T

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Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 11105406 - 11105286
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| || | ||| ||| | |||||||||| | || |||||  ||  ||||| |||||||||||||  | |||||||||||||||||    
T  11105406 aaaaaataaaatttaatcttcgaatattcttctgatacgtatcagaaagtatcgaacatgtatcgatgcaggatacgcaaagaatacggtacgtcatcca 11105307  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||| ||||||| | ||||||    
T  11105306 ttttaaagtatcagagcttca 11105286  T

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Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 31741203 - 31741267
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgg 214  Q
    |||||||||| ||||| |||| ||| || |||||||||| |||||||||||||||||||||||||    
T  31741203 tatcgggcaggtatcgatgcatgatgcgtaggggatacgatacgtcatccattttgaagtatcgg 31741267  T

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Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 7255001 - 7254928
Alignment:
Q  150 tatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 223  Q
    |||||||||  |||||||||| ||||| ||||||||||| ||| || |||||||||||||||||  ||||||||    
T  7255001 tatcgggcatgtatcggtgcatgatacacaggggatacgatacatcgtccattttgaagtatcgaagcttcaca 7254928  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 22989332 - 22989437
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||  |  |||||| ||| ||||||||| || || |||| || ||||||| |||||| ||||||| | ||| |  || ||||||||    
T  22989332 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgcaagagatgcaatatgtcatcca 22989431  T
Q  201 ttttga 206  Q
    ||||||    
T  22989432 ttttga 22989437  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 23799065 - 23798960
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||  |  |||||| ||| ||||||||| || || |||| || ||||||| |||||| ||||||| | ||| |  || ||||||||    
T  23799065 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgcaagagatgcaatatgtcatcca 23798966  T
Q  201 ttttga 206  Q
    ||||||    
T  23798965 ttttga 23798960  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 10894519 - 10894563
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgg 145  Q
    |||||| |||||||||| || ||||||||||| ||||||||||||    
T  10894519 aaaaaacaaaatttaatcttcggatactctcctgatacgtatcgg 10894563  T

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Target: scaffold0640 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 8034 - 8214
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||||||        ||||||||||||||||||||||||||||||| |||||||||||    
T  8034 cacaagtatccgtgcgtatcgagacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcg 8133  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagc 225  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8134 ggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggggcttcacagc 8214  T

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Target: scaffold0250 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 5664 - 5507
Alignment:
Q  69 cgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtg 168  Q
    |||||| |||||||||||| |||||       |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  5664 cgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtg 5565  T
Q  169 caggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  5564 caggatacgcaggggatacggtacgtcgtccattttgaagtatcggggctttacagct 5507  T

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Target: scaffold0060 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 224
Target Start/End: Original strand, 30386 - 30565
Alignment:
Q  45 cacaagtatccgtgcgtatcaggacgtatcagaaagtatcggataattannnnnnnaaaaaataaaatttaatatttggatactctccagatacgtatcg 144  Q
    |||||||||||| ||||||| ||| ||||| ||||||||||||||||||         |||||||||||||||||||||||||||||| ||||||||||     
T  30386 cacaagtatccgagcgtatcgggatgtatcggaaagtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatca 30485  T
Q  145 ggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacag 224  Q
    |||| |||||||||| |||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  30486 ggaagtatcgggcaggtatcggtgtaggatacgcaggaaatacggtacgttatccattttgaagtatcggggcttcacag 30565  T

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Target: scaffold0177 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 25539 - 25654
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||           ||||||| |||||||||||||||||| |||||||||    
T  25539 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatc-----------ggtgcagaatacgcaggggatacggtgcgtcatcca 25627  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||||||||||||||||||    
T  25628 ttttgaagtatcggggcttcacagctt 25654  T

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Target: scaffold0037 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 27789 - 27905
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||||||||||||||||||||||||||| | ||||||||||||           ||| ||||||||||||||| ||||||||||||||||||||||||    
T  27789 aaaaaataaaatttaatatttggatactctgcggatacgtatcgga----------caggtatcggtgcaggatatgcaggggatacggtacgtcatcca 27878  T
Q  201 ttttgaagtatcggggcttcacagctt 227  Q
    |||||||||||||||||||||||||||    
T  27879 ttttgaagtatcggggcttcacagctt 27905  T

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Target: scaffold0285 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 13370 - 13252
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||| ||  |||||||||  ||||||||||||||| |||| | ||| ||||||||||||||||||||| |||||| |||||||||||    
T  13370 aaaaaataaaatttaatcttcagatactctcttgatacgtatcgggaagtatctgacaggtatcggtgcaggatacgcaggagatacgatacgtcatcca 13271  T
Q  201 ttttgaagtatcggggctt 219  Q
    |||||||||||||| ||||    
T  13270 ttttgaagtatcggagctt 13252  T

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Target: scaffold0112 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 42074 - 42183
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||           ||||||||||||||||||||||| ||||||||||||    
T  42074 aaaaaataaaatttaatatttggatactctctagatacgtatcgggaagtatc-----------ggtgcaggatacgcaggggatacagtacgtcatcca 42162  T
Q  201 ttttgaagtatcggggcttca 221  Q
    |||||||||||||||||||||    
T  42163 ttttgaagtatcggggcttca 42183  T

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Target: scaffold0005 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 44648 - 44713
Alignment:
Q  161 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44648 tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacagct 44713  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 44616 - 44653
Alignment:
Q  108 aaaatttaatatttggatactctccagatacgtatcgg 145  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  44616 aaaatttaatatttggatactctccggatacgtatcgg 44653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 10720 - 10598
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    ||||| ||| ||||||| ||  |||||||||| ||||||||||| ||| |||||||||  |||||||||| ||||||||||||||| ||||| |||||||    
T  10720 aaaaagtaacatttaatcttctgatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatcca 10621  T
Q  201 ttttgaagtatcggggcttcaca 223  Q
    |||| ||||||| ||||||||||    
T  10620 ttttaaagtatctgggcttcaca 10598  T

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Target: scaffold0406 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 13976 - 13863
Alignment:
Q  101 aaaaaataaaatttaatatttggatactctccagatacgtatcgggaaatatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatcca 200  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |          | || | |||||||||||||||  ||||| ||||||||||||    
T  13976 aaaaaaaaaaatttaatatttggatactctccggatacgtatcgggta----------ggtaacagtgcaggatacgcagatgatacagtacgtcatcca 13887  T
Q  201 ttttgaagtatcggggcttcacag 224  Q
    ||||||||||||||| ||||||||    
T  13886 ttttgaagtatcgggacttcacag 13863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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