View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7328_low_3 (Length: 372)

Name: NF7328_low_3
Description: NF7328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7328_low_3
NF7328_low_3
[»] chr4 (8 HSPs)
chr4 (15-341)||(22990246-22990574)
chr4 (15-341)||(22714651-22714979)
chr4 (15-341)||(28948908-28949236)
chr4 (40-346)||(22696864-22697172)
chr4 (40-361)||(46956533-46956859)
chr4 (287-361)||(28949216-28949290)
chr4 (287-361)||(22714959-22715033)
chr4 (287-361)||(22990192-22990266)
[»] scaffold0009 (2 HSPs)
scaffold0009 (15-341)||(200524-200862)
scaffold0009 (287-361)||(200842-200916)
[»] chr7 (1 HSPs)
chr7 (40-361)||(20087585-20087908)
[»] chr8 (1 HSPs)
chr8 (40-346)||(19646298-19646606)
[»] chr1 (1 HSPs)
chr1 (40-346)||(4344211-4344518)
[»] chr5 (1 HSPs)
chr5 (40-346)||(22808084-22808392)
[»] chr2 (1 HSPs)
chr2 (40-333)||(23362369-23362651)


Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 15 - 341
Target Start/End: Complemental strand, 22990574 - 22990246
Alignment:
Q  15 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 114  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22990574 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 22990475  T
Q  115 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22990474 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 22990375  T
Q  215 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  || ||  | ||||||    
T  22990374 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt 22990276  T
Q  312 acttcttaattcatagtacttcctagctta 341  Q
    ||||||||||||||||||| ||||| ||||    
T  22990275 acttcttaattcatagtacatcctatctta 22990246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 15 - 341
Target Start/End: Original strand, 22714651 - 22714979
Alignment:
Q  15 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 114  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22714651 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 22714750  T
Q  115 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22714751 taagttactggtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 22714850  T
Q  215 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  || ||  | ||||||    
T  22714851 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt 22714949  T
Q  312 acttcttaattcatagtacttcctagctta 341  Q
    ||||||||||||||||||| ||||| ||||    
T  22714950 acttcttaattcatagtacatcctatctta 22714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 15 - 341
Target Start/End: Original strand, 28948908 - 28949236
Alignment:
Q  15 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 114  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28948908 gaacaacaaatccgaagcaaaaaaacaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 28949007  T
Q  115 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 214  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28949008 taagttatttgtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 28949107  T
Q  215 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagatta 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |  ||   | |||||||    
T  28949108 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattacttcctagatta 28949207  T
Q  313 cttcttaattcatagtacttcctagctta 341  Q
    |||||||||||||||||| ||||||||||    
T  28949208 cttcttaattcatagtacatcctagctta 28949236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 22697172 - 22696864
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  22697172 caacataagtgaaccataaatacgagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt 22697073  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22697072 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcaaagttaccggtacttcctagattacttcttaatt 22696973  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 337  Q
    |||||||||| || |||||||||||||||||||||||| || | |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  22696972 taaagacaacagagcattacaacattaaagactaaacaaaatagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 22696873  T
Q  338 cttacttcc 346  Q
     ||| ||||    
T  22696872 gttaattcc 22696864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 361
Target Start/End: Complemental strand, 46956859 - 46956533
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| |||    
T  46956859 caacataagtgaacaaaaaatacaagcataattatcacacaacataagccttcattaaggtatagaaacattacataagttactagtacttcataatagt 46956760  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  46956759 acttcatagttactagcacttcttagattacttcctaattaaaaggcaaaacataacagtacttgatagttactagtacttcctagattacttcttaatt 46956660  T
Q  240 taaagacaacggaacattacaacattaaagacta---aacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcc 334  Q
    |||||| || ||||||||||||||||||||||||   || |||||| | |||||||||   |  ||   | ||||||||||||||||||||||||||| |    
T  46956659 taaagataatggaacattacaacattaaagactaaataatataacagtgcttcatagttactagtacttcctagattacttcttaattcatagtactttc 46956560  T
Q  335 tagcttacttcctagtcacacaggttc 361  Q
    |||||||||||||||||||||||||||    
T  46956559 tagcttacttcctagtcacacaggttc 46956533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 28949216 - 28949290
Alignment:
Q  287 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 361  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28949216 ttcatagtacatcctagcttagattgcttcttaactcatagtacttcctagcttacttcctagtcacataggttc 28949290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 22714959 - 22715033
Alignment:
Q  287 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 361  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22714959 ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc 22715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 22990266 - 22990192
Alignment:
Q  287 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 361  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22990266 ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc 22990192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 341
Target Start/End: Original strand, 200524 - 200862
Alignment:
Q  15 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 114  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  200524 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 200623  T
Q  115 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataac----------agtacttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||          ||||||||    
T  200624 taagttactggtacttcataagagtacttcatagttactagcacttcttagattaattcctaattgaaaggaaaaacataacagtacttcatagtacttc 200723  T
Q  205 atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta-- 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |  ||      
T  200724 atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattact 200823  T
Q  303 gcttagattacttcttaattcatagtacttcctagctta 341  Q
     | ||||||||||||||||||||||||| ||||||||||    
T  200824 tcctagattacttcttaattcatagtacatcctagctta 200862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 200842 - 200916
Alignment:
Q  287 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  200842 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctaatcacagaggttc 200916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 40 - 361
Target Start/End: Complemental strand, 20087908 - 20087585
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  20087908 caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataatagt 20087809  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  20087808 acttcatagttactagtacttcttagattacttcctaattaaaaggcaaaacataacagtacttcatagttactagtactttctagattacttcttaatt 20087709  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 337  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||||||||||   |  ||   | |||||||||||||||||||||  |||||||||    
T  20087708 taaagataacggaacattacaacattaaagactaaatataacagtacttcatagttactagtacttcctagattacttcttaattcataagacttcctag 20087609  T
Q  338 cttacttcctagtcacacaggttc 361  Q
    ||||||||||||||||||| ||||    
T  20087608 cttacttcctagtcacacaagttc 20087585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 19646606 - 19646298
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19646606 caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaatattacataagttactggtacttcataagagt 19646507  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19646506 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttaccggtacttcctagattacttcttaatt 19646407  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 337  Q
    |||||||||| |||||||||||||||||||| ||||||||| | |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  19646406 taaagacaacagaacattacaacattaaagattaaacataagagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 19646307  T
Q  338 cttacttcc 346  Q
    |||| ||||    
T  19646306 cttaattcc 19646298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 4344518 - 4344211
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  4344518 caacataagtgaacaaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt 4344419  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  4344418 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttactggtacttcctagattacttcttaatt 4344319  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 337  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  4344318 taaagacaacgaaacatta-aacattaaagactaaacataacagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 4344220  T
Q  338 cttacttcc 346  Q
    |||| ||||    
T  4344219 cttaattcc 4344211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 22808392 - 22808084
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  22808392 caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaaaattacataagttactagtacttcataagagt 22808293  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| | |||| |||| ||||||||||||||||  |||||||||||||||||||||||||    
T  22808292 acttcatggttactaccacttcttagattacttcctaattgaaaagaaaaatataatagtacttcatagttactagtacttcctagattacttcttaatt 22808193  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 337  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |  ||   | ||||||||||||||||| ||||||||||||||    
T  22808192 taaagataacggaacattacaacattaaagactaaacataacaatacttcatagttactagtacttcatagattacttcttaatttatagtacttcctag 22808093  T
Q  338 cttacttcc 346  Q
    |||| ||||    
T  22808092 cttaattcc 22808084  T

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Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 40 - 333
Target Start/End: Original strand, 23362369 - 23362651
Alignment:
Q  40 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||             |||    
T  23362369 caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaacattacataagttact-------------agt 23362455  T
Q  140 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 239  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  23362456 acttcatggttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcatagttattagtacttcctagattacttcttaatt 23362555  T
Q  240 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttc 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |  ||   | ||||||||||||||||||||||||||||    
T  23362556 taaagacaacggaacattacaacattaaagactaaacataacaatacttaatagttactagtacttcgtagattacttcttaattcatagtacttc 23362651  T

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