View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7330_low_16 (Length: 317)
Name: NF7330_low_16
Description: NF7330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7330_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 29448601 - 29448303
Alignment:
| Q |
1 |
cttactgaaatggctgtacagaaggatgaacagcctccactggaattagaacctgcaaagctgttaagttttagcatctctgataccgatggaacgaaaa |
100 |
Q |
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| T |
29448601 |
cttactgaaatggctgtacagaaggatgaacagcctccactggaattagaacctgcaaagctgttaaattttcgcatctctgacaccgaaggaacgaaaa |
29448502 |
T |
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| Q |
101 |
gtaaaacactgagcagtttaggtggtattatgatgcaacagaatttagcgaaggaacaaaatcaatctagtgacggtatttcgccaaaaatagaaagtaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29448501 |
gtaaaacactgagcagtttaggtggtattatgatgcaacagaatttagcgaaggaacaaaatcaatctagtgacggtatttcgccaaaaatagaaagtaa |
29448402 |
T |
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| Q |
201 |
tcatcacgaacagcagcataataatgcgaatgctttatatgatcttggtgaccatgaagaagaatcattgcgaatgttagacacgaaagctgttgaatg |
299 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29448401 |
tcatcacgaacagcagcataataatgtgaatgctttatatgatcttggtgaccatgaagaagaatcattgcgaatgttagacacgaaagctgttgaatg |
29448303 |
T |
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