View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7330_low_21 (Length: 268)
Name: NF7330_low_21
Description: NF7330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7330_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 2056376 - 2056142
Alignment:
| Q |
18 |
tggcaaacataggagcaataggtccaaaatcaatgatccatttgagctgcatatatatttaatcattcactcatacatactcatgttgattcatcatcac |
117 |
Q |
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| T |
2056376 |
tggcaaacataggagcaataggtccaaaatcaatgatccatttgagctgcatatatatttaatcatccactcatacatactcatattgattcatcatcac |
2056277 |
T |
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| Q |
118 |
atcttgaacaccatgacctgaaacttgattctaacaaaaccttaactaattctaatagtaagaagttatttatcttatggctcataactcaaaaccatca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2056276 |
atcttgaacaccatgacctgaaacttgattctaacaaaacctcaactaattctaatagtaagaagttatttatcttatggctcataactcaaaactatca |
2056177 |
T |
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| Q |
218 |
aaaaattataattaatcatttaaaatacttcaaac |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
2056176 |
aaaaattataattaatcatttaaaatacttcaaac |
2056142 |
T |
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