View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7330_low_26 (Length: 237)
Name: NF7330_low_26
Description: NF7330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7330_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 41208814 - 41209036
Alignment:
| Q |
1 |
cataagcataaattgaaacaaaaaacagtgatttatgattttatttgcatacccatattttgagcaaaattagaaagagtaccaaaaagaaagtgatttt |
100 |
Q |
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| T |
41208814 |
cataagcataaattgaaacaaaaaacagtgatttatgattttatttgtatacccatattttgagcaaaattagaaagagtaccaaaaagaaagtgatttt |
41208913 |
T |
|
| Q |
101 |
tagacatagtcatttctgggtttacacattaaagcttcaatgtacgaaaattaagcagnnnnnnnnnnnnnnnnnnnnntgatacttactttcactgatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
41208914 |
tagacatagtcatttctgggtttacacattaaagcttcaatgtacgaaaattaagcagaaaaatgaaaaatttgaaaaatgatacttactttcactgatg |
41209013 |
T |
|
| Q |
201 |
ggtctgagtcaagaggggtaatt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
41209014 |
ggtctgagtcaagaggggtaatt |
41209036 |
T |
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