View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7331_high_15 (Length: 212)
Name: NF7331_high_15
Description: NF7331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7331_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 4826240 - 4826071
Alignment:
| Q |
19 |
ctgagtaagtgttaaaatgaaaaatcaaattatattaaccatatttcaatatgtttattctatttactttgcaaaattattcatttcaagcagttgtata |
118 |
Q |
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| T |
4826240 |
ctgagtaagtgttaaaatgaaaaatcaaattatattaaccatatttcaatatgtttattctatttactttgcaaaaatattcatttcaagcagttg---- |
4826145 |
T |
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| Q |
119 |
tgaatttattgtacaaagatttcaaagatcaaattacatgaaaattatgtgaaaaaagttacattactaatttattttat |
198 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4826144 |
------tattgtacaaagatttcaatgatcaaattacatgaaaattatgtgaaaaaagttacattactaatttattttat |
4826071 |
T |
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