View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7331_high_4 (Length: 402)
Name: NF7331_high_4
Description: NF7331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7331_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 17 - 391
Target Start/End: Complemental strand, 13766799 - 13766425
Alignment:
| Q |
17 |
tcatcaaagtgattcgtggtttgaaaactcagtatctgacttaagaaacaactatcatcgaagtgattattattgctatatttgtggctttcaatggtct |
116 |
Q |
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| T |
13766799 |
tcatcaaagtgattcgtggtttgaaaactcagtatctgacttaagaaacaactatcattgaagtgattattattgctatatttgtggctttcaatggttt |
13766700 |
T |
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| Q |
117 |
ttccctaaaccattaataattaacattcatataatttttccatgttaatatactctatttttgttattataggattgttcttattttaccttttctttat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
13766699 |
ttccctaaaccattaataattaacattcatataatttttccatgttaatatactctatttttgttatcataggattgttcttattttaccttttctttat |
13766600 |
T |
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| Q |
217 |
ttgatgatttagagttaatattatttgttgagtacgtatcacattaaacttgaggcaatggtgcatatttctattttaatagttttcttgtaaacatgag |
316 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13766599 |
ttgatgatttagagttaatattatttgttaagtacgtatcacattaaacttgaggcaatggtgcatatttctattttaatagttttcttgtaaacatgag |
13766500 |
T |
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| Q |
317 |
gacttctaaccaaataagcaaattaatgtttgggtaccttagattttcttgtttaaccttcacacgtgtgttcat |
391 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13766499 |
gacttctaaccaaataagcaaattaatgtgtgggtaccttagattttcttgtttaaccttcacacgtgtgttcat |
13766425 |
T |
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