View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7331_high_8 (Length: 304)
Name: NF7331_high_8
Description: NF7331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7331_high_8 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 44128576 - 44128830
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128576 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
44128675 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128676 |
caccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggt |
44128775 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128776 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
44128830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 44132781 - 44133035
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132781 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
44132880 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132881 |
caccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggt |
44132980 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132981 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
44133035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 44141203 - 44141457
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141203 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
44141302 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141303 |
caccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggt |
44141402 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141403 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
44141457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 46707108 - 46706854
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
46707108 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattacccacttaatcgtttg |
46707009 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
46707008 |
cactactagtggtgtagacatgcctggagctgattaccaactcacaaaactcttcggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggt |
46706909 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
46706908 |
tgctttgcaggaggcacggggcttcgtttggctaacgatttggctgagaacaaca |
46706854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 5289817 - 5289563
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5289817 |
tggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttg |
5289718 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289717 |
caccacaagtggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggg |
5289618 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
5289617 |
tgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaaca |
5289563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 5310399 - 5310653
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5310399 |
tggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttg |
5310498 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310499 |
caccacaagtggtgtagacatgcctggagctgattatcaactcacaaaactcttgggccttcgtccatatgtgaaaaggtatatgatgtaccaacaaggg |
5310598 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
5310599 |
tgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaaca |
5310653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 5315113 - 5315367
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5315113 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttg |
5315212 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||| |
|
|
| T |
5315213 |
caccacaagtggtgttgacatgcctggagcagattatcaactcaccaaactattaggtcttcgcccatatgtgaaaagatacatgatgtaccaacaaggg |
5315312 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||| |
|
|
| T |
5315313 |
tgctttgcaggtggcacggtgctccgtttggctaaagatttggctgagaacaaca |
5315367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 5284310 - 5284564
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
5284310 |
tggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaagtcaaagattactcacttaatcgtttg |
5284409 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5284410 |
caccacaagtggtgtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaaggg |
5284509 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| || ||||| ||||||||||| |||||||||||||| ||||||| |
|
|
| T |
5284510 |
tgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaaca |
5284564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 5302498 - 5302752
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5302498 |
tggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttg |
5302597 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| |||||||| | ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5302598 |
caccacaagtggtgtagacatgcccgaagctgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaaggg |
5302697 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| |||||| ||||||| ||||||| |
|
|
| T |
5302698 |
tgttttgcaggtggcacggtgcttcgtttggccaaagatctagctgagaacaaca |
5302752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 183; Significance: 5e-99; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 1492170 - 1492424
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1492170 |
tggtggtggtagaagtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttg |
1492269 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| |||||| |
|
|
| T |
1492270 |
caccacaagcggtgtagacatgcctggggccgattatcaactcactaaactcttaggtcttcgtccatatgtaaaaagatacatgatgtaccagcaaggt |
1492369 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| |||||||| |||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
1492370 |
tgttttgcaggtggcacggtacttcgtttggctaaggatttggctgagaacaaca |
1492424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 262
Target Start/End: Original strand, 1478001 - 1478253
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
1478001 |
tggtggtggtagaagtacctagactaggaaaggaggctgcagtgaaagctataaaagaatggggccaaccaaaatcaaagattacacacttgatcttttg |
1478100 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1478101 |
caccacaagtggtgtagacatgcctggcgctgattaccaactcaccaaactcttaggtcttcgtccatatgtgaagaggtatatgatgtaccaacaagga |
1478200 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaa |
262 |
Q |
| |
|
|| |||||||| || ||||| ||||||||||| || || || ||||| ||||| |
|
|
| T |
1478201 |
tgttttgcaggtgggacggtgcttcgtttggccaaggacttggctgagaacaa |
1478253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 1504979 - 1505233
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
1504979 |
tggtggtggtagaggtacctagactaggaaaggaggctgccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaattgtttg |
1505078 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
1505079 |
caccacaagtggtgtagacatgcctggagctgattaccaactcaccaaactcttaggtcttcgcccatatgtgaagaggtacatgatgtaccagcaagga |
1505178 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| || ||||| ||||||||||| || || || ||||| ||||||| |
|
|
| T |
1505179 |
tgttttgcaggtgggacggtgcttcgtttggccaaggacttggctgagaacaaca |
1505233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 1482195 - 1482426
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| || |||| |
|
|
| T |
1482195 |
tggtggtggtagaggtgcctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaaatcaaagattacacacttaatattttg |
1482294 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
|||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
1482295 |
taccacaagtggtgtagacatgcctggtgccgattaccaactcacaaaactcttaggtcttcgtccatatgtgaagagatacatgatgtaccaacaagga |
1482394 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggc |
241 |
Q |
| |
|
||||||||||| || ||||| ||||||||||| |
|
|
| T |
1482395 |
tgctttgcaggtgggacggtgcttcgtttggc |
1482426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 1509126 - 1509375
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||| ||| |||||||||| ||||| || |||| ||||||||||||||||||||||||||| || ||||| ||||||||||| || || ||| |||| |
|
|
| T |
1509126 |
tggtggttgtaaaggtacctaggctaggaaaagaggttgcagtgaaggctataaaagaatggggccagccaaaatcaaagattacacatttaatcttttg |
1509225 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| |||| ||||| || ||||| |||||||||| |||||||| |||||||| ||||||||||||||| | |
|
|
| T |
1509226 |
caccacaagtggtgttgatatgtctggagctcattatcaacttaccaaacttttaggtcttcacccatatgtaaaaaggtacatgatgtaccaacaaagg |
1509325 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaa |
259 |
Q |
| |
|
|| |||||||| ||||| || |||| |||||| || ||||| |||||||| |
|
|
| T |
1509326 |
tgttttgcaggtggcactgtgcttcatttggcaaaggatttggctgaaaa |
1509375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 1499249 - 1499488
Alignment:
| Q |
17 |
ggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccaca |
116 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| || || || |||||||| |
|
|
| T |
1499249 |
ggtagagatacctagactagggaaggaggctgcagtgaaggctatcgaagaatggggtcaaccgaagtcaaatattacacatttaattttttgcacctat |
1499348 |
T |
|
| Q |
117 |
agtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttg |
216 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || | || |
|
|
| T |
1499349 |
agtggtgtagacatgcctggtgcggattaccaactaacaaaactcttaggtcttaacccatatgtgaaaaggtacatgatgtaccaactagggtgttatg |
1499448 |
T |
|
| Q |
217 |
caggaggcacggtccttcgtttggctaaagatttagctga |
256 |
Q |
| |
|
|||| || || || ||||||||||| || || |||||||| |
|
|
| T |
1499449 |
caggtggaacagtacttcgtttggcgaaggacttagctga |
1499488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 1486672 - 1486888
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
|||||||| ||| || ||||| ||||| || |||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||| || |||| |
|
|
| T |
1486672 |
tggtggtgcgagacgtgcctaggctaggaaatgaggctgcagtgaaagctataaaagaatagggccaaccaaagtcaaagattacacacttaatattttg |
1486771 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||||| |||||| | | ||||||||| || |||||||||||||||||||||||||||||| | || |||||||| |||||||||| ||||||||||| |
|
|
| T |
1486772 |
caccatgagtggtataggcatgcctggtgccgattaccaactcacaaaactcttaggtctttgcccggatgtgaaacggtatatgatataccaacaagga |
1486871 |
T |
|
| Q |
210 |
tgctttgcaggaggcac |
226 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
1486872 |
tgctttgcagggggcac |
1486888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 24163910 - 24163656
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||| ||||||| ||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||| || ||||| || |||| |
|
|
| T |
24163910 |
tggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaagaatggggccaaccaaagtcaaagatcacacacttaatattttg |
24163811 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
||| | ||||||||| || |||||||| || |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |
|
|
| T |
24163810 |
cactataagtggtgtagatatgcctggtgccgattaccaactcacaaaactcttaggtcttcgcccatgtgtaaaaaggtatatgatgtaccaacaaggg |
24163711 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||||| || || || ||||| ||||||| |
|
|
| T |
24163710 |
tgttttgcaggtggcacggtacttcgcttggccaaggacttggctgagaacaaca |
24163656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 33 - 264
Target Start/End: Complemental strand, 37863487 - 37863256
Alignment:
| Q |
33 |
ctagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgttgacatgc |
132 |
Q |
| |
|
||||| || ||||||||| |||||||| || |||||||||||||| ||||||||||||||||| | || ||||||||||||||||||| || |||| |
|
|
| T |
37863487 |
ctaggaaaagaggctgcaacaaaggctatcaaggaatggggtcaacctaagtcaaagattactcatctaattttttgcaccacaagtggtgtggatatgc |
37863388 |
T |
|
| Q |
133 |
ctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtcct |
232 |
Q |
| |
|
|||| ||||| || || |||||||| ||||| |||||||| || |||||||| | ||||||||||| ||||||||||| ||||| || || ||||| || |
|
|
| T |
37863387 |
ctggtgctgactatcagctcacaaagctcttgggtcttcgcccgtatgtgaagcgttatatgatgtatcaacaaggttgttttgctggtgggacggtgct |
37863288 |
T |
|
| Q |
233 |
tcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |
|
|
| T |
37863287 |
tcgtttggctaaagatttggctgaaaacaaca |
37863256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 37859484 - 37859230
Alignment:
| Q |
10 |
tggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttg |
109 |
Q |
| |
|
||||||| || |||||||| |||||||| || ||||| ||| ||||| || || |||||||||||||| ||||| |||||||| ||| | ||| |||| |
|
|
| T |
37859484 |
tggtggttgtggaggtaccaagactaggaaaagaggcagcaacaaaggccatcaaggaatggggtcaacctaagtccaagattacccacctcatcttttg |
37859385 |
T |
|
| Q |
110 |
caccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggt |
209 |
Q |
| |
|
|||||| ||||| || |||||||| || || || || || || ||||| ||||| || ||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
37859384 |
caccaccagtggcgtggacatgcccggtgccgactatcagctgacaaagctcttgggccttcgtccatatgtgaagcgttacatgatgtaccaacaaggt |
37859285 |
T |
|
| Q |
210 |
tgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaaca |
264 |
Q |
| |
|
|| ||||| || |||||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
37859284 |
tgttttgctggtggcacggtgcttcgtttggctaaagacttggctgaaaacaaca |
37859230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 39030117 - 39030327
Alignment:
| Q |
54 |
aaggctataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgttgacatgcctggagctgattaccaactca |
153 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||| | ||||||| | || ||||||| |||||||||| || |||||||||||||| || || |||| |
|
|
| T |
39030117 |
aaggctatcaatgaatggggtcaacctaagtcaatggttactcatctcatattttgcacttcaagtggtgtcgatatgcctggagctgactatcagctca |
39030216 |
T |
|
| Q |
154 |
caaaactcttaggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtttggctaaagatttagc |
253 |
Q |
| |
|
|||| |||||||| ||| |||||||||| || | ||||||||||||||||||||||| ||||| || | | || ||||| |||||||||||||| || |
|
|
| T |
39030217 |
caaagctcttaggcctttgtccatatgtaaagcgttatatgatgtaccaacaaggttgttttgctggtgcgatggctcttcgcttggctaaagatttggc |
39030316 |
T |
|
| Q |
254 |
tgaaaacaaca |
264 |
Q |
| |
|
||| ||||||| |
|
|
| T |
39030317 |
tgagaacaaca |
39030327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 40421929 - 40421885
Alignment:
| Q |
119 |
tggtgttgacatgcctggagctgattaccaactcacaaaactctt |
163 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| |||||||| |
|
|
| T |
40421929 |
tggtgttgacatgcctggtgctgattatcaactcatcaaactctt |
40421885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 262
Target Start/End: Original strand, 35250869 - 35251065
Alignment:
| Q |
66 |
gaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgttgacatgcctggagctgattaccaactcacaaaactcttag |
165 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| | || |||||| || |||||||| || |||||||| |||||||| || ||||||||| | ||| |
|
|
| T |
35250869 |
gaatggggtcaaccaaagtccaagatcactcacctcatattttgcattactagtggtgtggatatgcctggtgctgattatcagctcacaaaattgctag |
35250968 |
T |
|
| Q |
166 |
gtcttcgtccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaa |
262 |
Q |
| |
|
| |||||||| | |||||| | |||||||||||||||||||| || || || || || | ||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
35250969 |
gacttcgtccgtcggtgaaacgttatatgatgtaccaacaagggtgtttcgctggtggtatggttcttcgtttggctaaagatttggctgagaacaa |
35251065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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