View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7332_high_30 (Length: 337)

Name: NF7332_high_30
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7332_high_30
NF7332_high_30
[»] chr5 (6 HSPs)
chr5 (18-204)||(27027224-27027411)
chr5 (149-203)||(42640375-42640429)
chr5 (149-203)||(38001916-38001970)
chr5 (149-203)||(38279348-38279402)
chr5 (149-203)||(42862310-42862364)
chr5 (72-116)||(40691889-40691934)
[»] chr8 (4 HSPs)
chr8 (149-203)||(44437049-44437103)
chr8 (149-193)||(35841086-35841130)
chr8 (149-203)||(41957675-41957729)
chr8 (284-325)||(35840981-35841022)
[»] chr2 (7 HSPs)
chr2 (280-325)||(28266481-28266526)
chr2 (149-203)||(40728646-40728700)
chr2 (149-203)||(28266355-28266409)
chr2 (149-203)||(41339469-41339523)
chr2 (149-203)||(35669984-35670038)
chr2 (150-203)||(18291962-18292015)
chr2 (18-71)||(24767105-24767158)
[»] chr7 (8 HSPs)
chr7 (149-204)||(40106748-40106803)
chr7 (149-203)||(12910947-12911001)
chr7 (150-203)||(13163478-13163531)
chr7 (149-203)||(3692227-3692281)
chr7 (149-203)||(18366537-18366591)
chr7 (149-203)||(22078563-22078617)
chr7 (149-203)||(24053040-24053093)
chr7 (280-325)||(24053167-24053211)
[»] chr6 (4 HSPs)
chr6 (149-203)||(10750833-10750887)
chr6 (149-203)||(24164732-24164784)
chr6 (152-203)||(26181901-26181952)
chr6 (149-203)||(13772624-13772678)
[»] chr3 (5 HSPs)
chr3 (149-203)||(9105034-9105088)
chr3 (150-204)||(43277247-43277301)
chr3 (149-203)||(3504589-3504643)
chr3 (149-203)||(37979903-37979956)
chr3 (280-325)||(37979786-37979830)
[»] chr1 (3 HSPs)
chr1 (149-203)||(44781453-44781507)
chr1 (149-203)||(6836832-6836886)
chr1 (74-122)||(51442505-51442554)
[»] chr4 (1 HSPs)
chr4 (150-203)||(28968442-28968495)
[»] scaffold1838 (1 HSPs)
scaffold1838 (155-203)||(1127-1175)


Alignment Details
Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 27027411 - 27027224
Alignment:
Q  18 catcataggttttgtagaggcaggatctgtacaaataggtgttccaacactattagtgtaacgccccggatttgatccaaggcattacgcctaatttatg 117  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  27027411 catcataggttttgtggaggcaggatcagtacaaataggtgttccaacactgttagtgtaatgccccggatttgatccaaggcattacgcctaatttatt 27027312  T
Q  118 ttcttattcgaaaatcatttcta-nnnnnnnnatcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaac 204  Q
    |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27027311 ttcttattcgaaaatcatttctatttttttttatcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaac 27027224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 42640429 - 42640375
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  42640429 atcatcaataataaattcttagcaaaacctatacaaaattcttaacataatttaa 42640375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 38001970 - 38001916
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  38001970 atcatcaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 38001916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 38279402 - 38279348
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||| ||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  38279402 atcattaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 38279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 42862364 - 42862310
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||| ||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  42862364 atcattaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 42862310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 40691934 - 40691889
Alignment:
Q  72 agtgtaacgccccggattt-gatccaaggcattacgcctaatttat 116  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  40691934 agtgtaacgccccggattttgatccaagacattacgcctaaattat 40691889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 44437103 - 44437049
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44437103 atcatcaataataaattattagaaaaacttatacaaaattcttaacataatttaa 44437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 35841130 - 35841086
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaa 193  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  35841130 atcatcaataataaattattagaaaaacttatacaaaattcttaa 35841086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 41957675 - 41957729
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  41957675 atcatcaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 41957729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 35841022 - 35840981
Alignment:
Q  284 ccgcgtacgctttcatcacacatcaaacttcatgtatcatct 325  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  35841022 ccgcgtacgctttcatcacacatcaaacttcatatataatct 35840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 28266481 - 28266526
Alignment:
Q  280 gtccccgcgtacgctttcatcacacatcaaacttcatgtatcatct 325  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  28266481 gtccccgcgtacgctttcatcacacatcaaacttcatatatcatct 28266526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 40728646 - 40728700
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  40728646 atcatcaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 40728700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 28266355 - 28266409
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    |||||||||||||| || |||| ||||| ||||||| ||||||||||||||||||    
T  28266355 atcatcaataataacttgttagcaaaacctatacaagattcttaacataatttaa 28266409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 41339469 - 41339523
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||| ||| |||| ||||  ||||||||||||||||||||||||||    
T  41339469 atcatcaataatacattcttagtaaaatctatacaaaattcttaacataatttaa 41339523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 35669984 - 35670038
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  |||||||| ||||| |||||||||||    
T  35669984 atcatcaataataaattcttagcaaaatctatacaaagttcttcacataatttaa 35670038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 18291962 - 18292015
Alignment:
Q  150 tcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||| |||||| |||| ||||  |||||||| |||||||||||||||||    
T  18291962 tcatcaatagtaaattcttagcaaaatctatacaaagttcttaacataatttaa 18292015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 24767158 - 24767105
Alignment:
Q  18 catcataggttttgtagaggcaggatctgtacaaataggtgttccaacactatt 71  Q
    |||||||||||||||||| |||||  | |||||||| ||||||| |||||||||    
T  24767158 catcataggttttgtagaagcagggccagtacaaattggtgttctaacactatt 24767105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 40106803 - 40106748
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaac 204  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||    
T  40106803 atcatcaataataaattcttagcaaaatctatacaaaattcttaacataatttaac 40106748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 12910947 - 12911001
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  12910947 atcatcaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 12911001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 13163478 - 13163531
Alignment:
Q  150 tcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||||||||    
T  13163478 tcatcaataataaattcttagcaaaacctatacaaaattcttgacataatttaa 13163531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 3692281 - 3692227
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||| ||||||| |||| ||||| ||||||||||||||| ||||||||||    
T  3692281 atcatcaatcataaattcttagcaaaacatatacaaaattcttagcataatttaa 3692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 18366537 - 18366591
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||| ||||||||||| |||| ||||  ||||||||||||||||||||||||||    
T  18366537 atcattaataataaattcttagcaaaatctatacaaaattcttaacataatttaa 18366591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 22078617 - 22078563
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||| ||||||||||| |||| ||||  ||||||||| ||||||||||||||||    
T  22078617 atcattaataataaattcttagcaaaatctatacaaaaatcttaacataatttaa 22078563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 24053040 - 24053093
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||| |  |||||||||||||||||||||||||    
T  24053040 atcatcaataataaattcttagcaaa-cgaatacaaaattcttaacataatttaa 24053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 24053167 - 24053211
Alignment:
Q  280 gtccccgcgtacgctttcatcacacatcaaacttcatgtatcatct 325  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||    
T  24053167 gtccccgcgtacgctttc-tcacacatcaaacttcatacatcatct 24053211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 10750833 - 10750887
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||    
T  10750833 atcatcaataataaattcttagcaaaatttatacaaaattctttacataatttaa 10750887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 24164784 - 24164732
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| |||||  |||||||||||||||||||||||||    
T  24164784 atcatcaataataaattcttagcaaaac--atacaaaattcttaacataatttaa 24164732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 26181901 - 26181952
Alignment:
Q  152 atcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    |||||||||||||| |||| ||||| |||||||||| ||| |||||||||||    
T  26181901 atcaataataaattcttagcaaaacctatacaaaatgcttgacataatttaa 26181952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 13772624 - 13772678
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  |||||||||||||| || ||||||||    
T  13772624 atcatcaataataaattcttagcaaaatctatacaaaattctttacgtaatttaa 13772678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 9105088 - 9105034
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||||  ||||||||||||||| ||||||||||    
T  9105088 atcatcaataataaattcttagcaaaatctatacaaaattcttagcataatttaa 9105034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 43277247 - 43277301
Alignment:
Q  150 tcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaac 204  Q
    |||||||||||||||| |||| ||||  ||||||||||||||||||| |||||||    
T  43277247 tcatcaataataaattcttagcaaaatctatacaaaattcttaacatcatttaac 43277301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 3504589 - 3504643
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||| |||||||||||||| ||||| ||||||  ||||||||||||| ||||    
T  3504589 atcatcactaataaattattagcaaaacctatacatgattcttaacataacttaa 3504643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 37979956 - 37979903
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||| ||| | ||||||||||| ||||||||||||||    
T  37979956 atcatcaataataaattcttagcaaa-cgtatacaaaatttttaacataatttaa 37979903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 37979830 - 37979786
Alignment:
Q  280 gtccccgcgtacgctttcatcacacatcaaacttcatgtatcatct 325  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||    
T  37979830 gtccccgcgtacgctttc-tcacacatcaaacttcatacatcatct 37979786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 44781453 - 44781507
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||  ||||| |||||| |||||||||||||||||||    
T  44781453 atcatcaataataaattcttaacaaaacctatacacaattcttaacataatttaa 44781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 6836886 - 6836832
Alignment:
Q  149 atcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||||||||| |||  ||||  |||||||||||||| |||||||||||    
T  6836886 atcatcaataataaattcttaacaaaatctatacaaaattctttacataatttaa 6836832  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 51442505 - 51442554
Alignment:
Q  74 tgtaacgccccggattt-gatccaaggcattacgcctaatttatgttctt 122  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| |||||    
T  51442505 tgtaacgccccggattttgatccaagacattacgcctaaattattttctt 51442554  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 28968442 - 28968495
Alignment:
Q  150 tcatcaataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||| |||||||||| |||| ||||| |||||||||| ||| |||||||||||    
T  28968442 tcatcgataataaattcttagcaaaacctatacaaaatgcttgacataatttaa 28968495  T

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Target: scaffold1838 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1838
Description:

Target: scaffold1838; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 1175 - 1127
Alignment:
Q  155 aataataaattattaggaaaacttatacaaaattcttaacataatttaa 203  Q
    ||||||||||| |||  ||||  ||||||||||||||||||||||||||    
T  1175 aataataaattcttaacaaaatctatacaaaattcttaacataatttaa 1127  T

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