View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7332_high_36 (Length: 302)

Name: NF7332_high_36
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7332_high_36
NF7332_high_36
[»] chr6 (21 HSPs)
chr6 (39-296)||(31514496-31514765)
chr6 (178-296)||(31473397-31473515)
chr6 (178-296)||(31494601-31494719)
chr6 (178-296)||(31499987-31500105)
chr6 (18-144)||(31500170-31500296)
chr6 (18-144)||(31473580-31473706)
chr6 (18-144)||(31494784-31494910)
chr6 (18-142)||(14745300-14745424)
chr6 (18-125)||(22396670-22396777)
chr6 (42-144)||(31514697-31514799)
chr6 (18-142)||(7848093-7848217)
chr6 (18-139)||(10907197-10907320)
chr6 (18-100)||(8404235-8404318)
chr6 (39-110)||(31494781-31494852)
chr6 (26-100)||(21038167-21038242)
chr6 (39-110)||(31500167-31500238)
chr6 (18-100)||(21083788-21083870)
chr6 (39-110)||(31473577-31473648)
chr6 (36-142)||(9190648-9190756)
chr6 (39-99)||(22396659-22396719)
chr6 (80-144)||(22396688-22396752)
[»] chr4 (5 HSPs)
chr4 (18-144)||(6821068-6821194)
chr4 (39-142)||(6821126-6821229)
chr4 (18-100)||(15873344-15873427)
chr4 (18-64)||(11555590-11555636)
chr4 (18-64)||(16285528-16285574)
[»] chr2 (5 HSPs)
chr2 (18-142)||(35922654-35922779)
chr2 (18-101)||(13361415-13361500)
chr2 (18-64)||(44586894-44586940)
chr2 (18-68)||(32252570-32252620)
chr2 (18-100)||(24724912-24724995)
[»] chr3 (6 HSPs)
chr3 (28-100)||(21974831-21974904)
chr3 (28-100)||(21997262-21997335)
chr3 (18-100)||(13929182-13929265)
chr3 (18-100)||(16363042-16363123)
chr3 (18-97)||(22159396-22159475)
chr3 (18-69)||(13927329-13927380)
[»] chr7 (3 HSPs)
chr7 (18-100)||(4532170-4532253)
chr7 (35-101)||(37946273-37946340)
chr7 (18-64)||(13477928-13477974)
[»] scaffold0385 (1 HSPs)
scaffold0385 (18-100)||(13811-13892)
[»] chr5 (4 HSPs)
chr5 (19-64)||(24614974-24615019)
chr5 (19-64)||(24711372-24711417)
chr5 (19-64)||(24744368-24744413)
chr5 (19-64)||(24757134-24757179)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-105)||(40709-40797)
[»] scaffold0092 (1 HSPs)
scaffold0092 (18-69)||(20092-20143)
[»] scaffold1001 (1 HSPs)
scaffold1001 (18-64)||(1018-1064)
[»] scaffold0145 (1 HSPs)
scaffold0145 (18-64)||(12142-12188)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 4e-81; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 39 - 296
Target Start/End: Complemental strand, 31514765 - 31514496
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgccagaaatattgtactggacttt 138  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||  |||||| || |||  ||||||         
T  31514765 ttgccagagatatattactggacttttctcaacatggttgccagaaatattttactgaacttttctcaacatagttgccaaaagtatcttactggtggca 31514666  T
Q  139 tct------------caaaatacactccaatgtacgcatgcacatgcatcaacgcatggagtcttgtacattctgacttctctctatgttcacgcggtcc 226  Q
    ||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31514665 tcaaataaaccaccacaaaatacactccaatgtacgcatgcacatgcatcaacgcatggagtcttgtacattctgacttctctctatgttcacgcggtcc 31514566  T
Q  227 cctctcctaaatgcaccattggttcatataattccttgacacttctttatcattgttccacaacaccaaa 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31514565 cctctcctaaatgcaccattggttcatataattccttgacacttctttatcattgttccaccacaacaaa 31514496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 31473515 - 31473397
Alignment:
Q  178 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31473515 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 31473416  T
Q  278 attgttccacaacaccaaa 296  Q
    |||||||||| ||| ||||    
T  31473415 attgttccaccacaacaaa 31473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 31494719 - 31494601
Alignment:
Q  178 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31494719 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 31494620  T
Q  278 attgttccacaacaccaaa 296  Q
    |||||||||| ||| ||||    
T  31494619 attgttccaccacaacaaa 31494601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 31500105 - 31499987
Alignment:
Q  178 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31500105 acgcatggagtcttgtacattctgacttctctctatgttcacgcggtcccctctcctaaatgcaccattggttcatataattccttgacacttctttatc 31500006  T
Q  278 attgttccacaacaccaaa 296  Q
    |||||||||| ||| ||||    
T  31500005 attgttccaccacaacaaa 31499987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 31500296 - 31500170
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||    
T  31500296 gtaccacacttactcatcattttgccagagttatattattggacttttctcaacatggttgccagagatatgttactggacttttctcaacatagttgcc 31500197  T
Q  118 agaaatattgtactggacttttctcaa 144  Q
    ||||||||| ||||| |||||||||||    
T  31500196 agaaatattttactgaacttttctcaa 31500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 31473706 - 31473580
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  ||||    
T  31473706 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgccagagatatgttactagacttttctcaacatgggtgcc 31473607  T
Q  118 agaaatattgtactggacttttctcaa 144  Q
    ||||||||| || || |||||||||||    
T  31473606 agaaatattttaatgaacttttctcaa 31473580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 31494910 - 31494784
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  31494910 gtaccacacttactcatcattttgccagagttatattattggatttttctcaacatggttgccagagatatgttactggacttttctcaacatggttgcc 31494811  T
Q  118 agaaatattgtactggacttttctcaa 144  Q
    ||| ||||| ||||| |||||||||||    
T  31494810 agagatattttactgaacttttctcaa 31494784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 14745300 - 14745424
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||    
T  14745300 gtaccacacctactcatcattttgccagagttttattgctggacttttctcaacatggttgtcagagatatgttactgaacttttctcaacatagttgcc 14745399  T
Q  118 agaaatattgtactggacttttctc 142  Q
    |||| |||  |||||||||||||||    
T  14745400 agaagtatattactggacttttctc 14745424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 22396777 - 22396670
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||    
T  22396777 gtaccacacctactcatcattttgccagagttatattactagacttttctcaacatggttgccagagatatgttactggaattttttcaacataattgcc 22396678  T
Q  118 agaaatat 125  Q
    ||| ||||    
T  22396677 agagatat 22396670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 31514799 - 31514697
Alignment:
Q  42 ccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgccagaaatattgtactggacttttct 141  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  31514799 ccagagttatattattggacttttctcaacatgattgccagagatatattactggacttttctcaacatggttgccagaaatattttactgaacttttct 31514700  T
Q  142 caa 144  Q
    |||    
T  31514699 caa 31514697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 7848093 - 7848217
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||  ||||||||||||||||  |||||    
T  7848093 gtaccacacctactcatcgttttgccagagttatattagtggacttttctcaacatagttgctagagatatgttataggacttttctcaacatagttgcc 7848192  T
Q  118 agaaatattgtactggacttttctc 142  Q
    |||| |||  || || |||||||||    
T  7848193 agaagtatgttagtgaacttttctc 7848217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 10907320 - 10907197
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttct-caacatggttgtcagagatatgttactggacttttct-caacatgattg 115  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||| | |||| |||| ||||  ||||||||||||||||||| | |||| ||||    
T  10907320 gtaccacacctactcgtcattttgccagagttatattaatggacttttctcccacatagttgccagaagtatgttactggacttttctcccacataattg 10907221  T
Q  116 ccagaaatattgtactggactttt 139  Q
    |||||| |||  ||||||||||||    
T  10907220 ccagaagtatgttactggactttt 10907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 8404318 - 8404235
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||| | ||| |||||||||||||||||||||    
T  8404318 gtaccactcctactcatcattttgccagagttatgttactggacttttctcatcatagtttgccagagatatgttactggactt 8404235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 31494852 - 31494781
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacat 110  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  31494852 ttgccagagatatgttactggacttttctcaacatggttgccagagatattttactgaacttttctcaacat 31494781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 21038242 - 21038167
Alignment:
Q  26 cttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| ||||| |||||||||||||||    
T  21038242 cttactcatcattttgccagagttatgttactggacttttctcatcatagtttgccagaggtatgttactggactt 21038167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 31500238 - 31500167
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacat 110  Q
    ||||||||| ||| ||||||||||||||||||||| |||| |||| |||| |||||| ||||||||||||||    
T  31500238 ttgccagagatatgttactggacttttctcaacatagttgccagaaatattttactgaacttttctcaacat 31500167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 21083870 - 21083788
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||||||||||| ||| | ||| ||||| |||||||||||||||    
T  21083870 gtaccactcttactcatcattttgccagaatta-gttactggacttttctcatcatagtttgccagaggtatgttactggactt 21083788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 31473648 - 31473577
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacat 110  Q
    ||||||||| ||| ||||| ||||||||||||||||| || |||| |||| ||| || ||||||||||||||    
T  31473648 ttgccagagatatgttactagacttttctcaacatgggtgccagaaatattttaatgaacttttctcaacat 31473577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 9190648 - 9190756
Alignment:
Q  36 attttgccagagttatattactggacttttct-caacatggttgtcagagatatgttactggacttttct-caacatgattgccagaaatattgtactgg 133  Q
    ||||| ||| |||||||||| ||||||||||| | |||| ||||| |||| ||||||||||||||| ||| | |||| |||||||||| |||  || ||     
T  9190648 atttttccaaagttatattagtggacttttctcccacatagttgttagaggtatgttactggacttctctcccacataattgccagaagtatgttagtga 9190747  T
Q  134 acttttctc 142  Q
    |||||||||    
T  9190748 acttttctc 9190756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 22396719 - 22396659
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggact 99  Q
    ||||||||| ||| |||||||| |||| |||||||  ||| ||||||||||||||| ||||    
T  22396719 ttgccagagatatgttactggaattttttcaacataattgccagagatatgttactagact 22396659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 22396752 - 22396688
Alignment:
Q  80 cagagatatgttactggacttttctcaacatgattgccagaaatattgtactggacttttctcaa 144  Q
    ||||| ||| ||||| |||||||||||||||| |||||||| ||||  ||||||| |||| ||||    
T  22396752 cagagttatattactagacttttctcaacatggttgccagagatatgttactggaattttttcaa 22396688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 6821068 - 6821194
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgcc 117  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  ||| |    
T  6821068 gtaccacacctactcatcgttttgccagagttatattactggacttttctcaacatagttgccagagatatgttactggacttttctcaacatagttgtc 6821167  T
Q  118 agaaatattgtactggacttttctcaa 144  Q
    |||| |||  |||||||||||||||||    
T  6821168 agaagtatgttactggacttttctcaa 6821194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 6821126 - 6821229
Alignment:
Q  39 ttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttctcaacatgattgccagaaatattgtactggacttt 138  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||  ||| ||||| |||  ||||||| |||    
T  6821126 ttgccagagatatgttactggacttttctcaacatagttgtcagaagtatgttactggacttttctcaacatagttgtcagaagtatgttactggaattt 6821225  T
Q  139 tctc 142  Q
    ||||    
T  6821226 tctc 6821229  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 15873427 - 15873344
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||    
T  15873427 gtaccactcctactcatcatttagccagagttatgttactggacttttctcatcatagtttgtcagagatatgttactggactt 15873344  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 11555590 - 11555636
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  11555590 gtaccacacctactcatcattttgccagagttatgttactggacttt 11555636  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 16285574 - 16285528
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  16285574 gtaccacacctactcgtcattttgccagagttatgttactggacttt 16285528  T

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Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 35922779 - 35922654
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacatggttgtcagagatatgttactggacttttct-caacatgattgc 116  Q
    ||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||| ||| |    
T  35922779 gtaccacatctactcatcgttttgccagagttttattactggacttttctcaacatagttgccagagatatgttactggacttttctcccacataatttc 35922680  T
Q  117 cagaaatattgtactggacttttctc 142  Q
    ||||| |||  |||||||||||||||    
T  35922679 cagaagtatgttactggacttttctc 35922654  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 13361415 - 13361500
Alignment:
Q  18 gtaccacacttactcatca-ttttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggacttt 101  Q
    ||||||||| ||||| ||| ||||||||||||||| |||||||||||||||| |||| | ||| ||||| ||||||||||||||||    
T  13361415 gtaccacacctactcttcaattttgccagagttatgttactggacttttctctacatagtttgccagaggtatgttactggacttt 13361500  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 44586940 - 44586894
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  44586940 gtaccacacctactcatcattttgccagagttatgttactggacttt 44586894  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32252620 - 32252570
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctc 68  Q
    ||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  32252620 gtaccacacctactcaccatttttgcagagttatattactggacttttctc 32252570  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 24724995 - 24724912
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||| ||| ||| || |||||| ||||||||||||||||| ||| | ||| ||||| |||||||||||||||    
T  24724995 gtaccactcctactcaccatattgtcaaagttatgttactggacttttctcatcatagcttgccagaggtatgttactggactt 24724912  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 21974831 - 21974904
Alignment:
Q  28 tactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| | ||| |||||||||||||||||||||    
T  21974831 tactcatcattttgccagagttatgttactggacttttctcatcatagtttgccagagatatgttactggactt 21974904  T

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Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 21997262 - 21997335
Alignment:
Q  28 tactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| | ||| |||||||||||||||||||||    
T  21997262 tactcatcattttgccagagttatgttactggacttttctcatcatagtttgccagagatatgttactggactt 21997335  T

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Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 13929265 - 13929182
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||| | ||| ||||| |||||||||||||||    
T  13929265 gtaccactcctactcatcattttgccagagttatgttactggacttttctcatcatagtttgccagaggtatgttactggactt 13929182  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 16363123 - 16363042
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||||||||||||||||||  | ||| ||||||||||||| ||| | ||| |||||||||||||||||||||    
T  16363123 gtaccactcctactcatcattttgccagagt--tgttaatggacttttctcatcatagtttgccagagatatgttactggactt 16363042  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 22159396 - 22159475
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactgga 97  Q
    ||||||| | |||||||||||| ||||||||||| ||||| ||||||||||| ||| | ||| ||||||||||||||||||    
T  22159396 gtaccactcatactcatcatttcgccagagttatgttact-gacttttctcatcatagtttgccagagatatgttactgga 22159475  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 13927380 - 13927329
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctca 69  Q
    ||||||| | || ||||||||||||| ||||||| |||||||||||||||||    
T  13927380 gtaccactcctagtcatcattttgccggagttattttactggacttttctca 13927329  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 4532253 - 4532170
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | ||||||||||||||||| |||||| ||||||||||||||||| ||| | ||| ||||| ||||||||| |||||    
T  4532253 gtaccactcctactcatcattttgccatagttatgttactggacttttctcatcatagtttgccagaggtatgttactagactt 4532170  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 37946340 - 37946273
Alignment:
Q  35 cattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggacttt 101  Q
    ||||||||||||||||| ||| |||||||||||| |||| | ||||||||| ||||||| ||||||||    
T  37946340 cattttgccagagttatgttattggacttttctctacatagtttgtcagaggtatgttattggacttt 37946273  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 13477974 - 13477928
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  13477974 gtaccacacctactcatcatttttccagagttatgttactggacttt 13477928  T

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Target: scaffold0385 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 13811 - 13892
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctcaacat-ggttgtcagagatatgttactggactt 100  Q
    ||||||| | |||||||||||||||||||||  | ||| ||||||||||||| ||| | ||| |||||||||||||||||||||    
T  13811 gtaccactcctactcatcattttgccagagt--tgttaatggacttttctcatcatagtttgccagagatatgttactggactt 13892  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24614974 - 24615019
Alignment:
Q  19 taccacacttactcatcattttgccagagttatattactggacttt 64  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||    
T  24614974 taccacacctactcgtcattttgccagagttatgttactggacttt 24615019  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24711372 - 24711417
Alignment:
Q  19 taccacacttactcatcattttgccagagttatattactggacttt 64  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||    
T  24711372 taccacacctactcgtcattttgccagagttatgttactggacttt 24711417  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24744368 - 24744413
Alignment:
Q  19 taccacacttactcatcattttgccagagttatattactggacttt 64  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||    
T  24744368 taccacacctactcgtcattttgccagagttatgttactggacttt 24744413  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24757134 - 24757179
Alignment:
Q  19 taccacacttactcatcattttgccagagttatattactggacttt 64  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||||    
T  24757134 taccacacctactcgtcattttgccagagttatgttactggacttt 24757179  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 40709 - 40797
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttc-tcaacatggttgtcagagatatgttactggacttttctc 105  Q
    ||||||||  |||| | |||||||| |||||||||||||||||||||||  | |||| ||||  |||| ||||||| ||||||||||||    
T  40709 gtaccacatctacttaccattttgctagagttatattactggacttttcacccacatagttgctagaggtatgttattggacttttctc 40797  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 20143 - 20092
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttttctca 69  Q
    ||||||| | |||||||||||||||||||||||| |||||||  ||||||||    
T  20143 gtaccactcctactcatcattttgccagagttatgttactgggattttctca 20092  T

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Target: scaffold1001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 1018 - 1064
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    ||||||||| ||||| |||||||| |||||||||||| |||||||||    
T  1018 gtaccacacctactcgtcattttgtcagagttatattcctggacttt 1064  T

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Target: scaffold0145 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 12142 - 12188
Alignment:
Q  18 gtaccacacttactcatcattttgccagagttatattactggacttt 64  Q
    |||||| || ||||| |||||||||||||||||| ||||||||||||    
T  12142 gtaccaaacctactcgtcattttgccagagttatgttactggacttt 12188  T

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