View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7332_high_39 (Length: 277)

Name: NF7332_high_39
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7332_high_39
NF7332_high_39
[»] chr5 (10 HSPs)
chr5 (9-253)||(18267791-18268033)
chr5 (141-187)||(33953170-33953216)
chr5 (138-194)||(22658866-22658922)
chr5 (110-178)||(31882582-31882650)
chr5 (142-197)||(22029843-22029898)
chr5 (132-193)||(34928827-34928888)
chr5 (136-180)||(18623596-18623640)
chr5 (112-187)||(19824597-19824672)
chr5 (106-179)||(2630810-2630883)
chr5 (141-193)||(14151939-14151991)
[»] chr1 (14 HSPs)
chr1 (124-187)||(26478587-26478650)
chr1 (114-178)||(45781193-45781257)
chr1 (108-187)||(19431393-19431472)
chr1 (141-197)||(17923868-17923924)
chr1 (142-194)||(48914981-48915033)
chr1 (142-194)||(48915372-48915424)
chr1 (112-187)||(3950298-3950373)
chr1 (138-192)||(24671195-24671249)
chr1 (115-187)||(49177411-49177482)
chr1 (132-187)||(26056823-26056878)
chr1 (132-194)||(50539724-50539786)
chr1 (141-178)||(15106250-15106287)
chr1 (138-187)||(44448501-44448550)
chr1 (142-178)||(48915187-48915223)
[»] chr3 (8 HSPs)
chr3 (141-187)||(16278814-16278860)
chr3 (114-193)||(46348389-46348468)
chr3 (141-194)||(10688650-10688703)
chr3 (141-197)||(39485463-39485519)
chr3 (116-173)||(39488498-39488555)
chr3 (80-197)||(43168714-43168827)
chr3 (141-175)||(42466972-42467006)
chr3 (141-193)||(47548878-47548930)
[»] chr2 (11 HSPs)
chr2 (112-193)||(32832590-32832671)
chr2 (141-194)||(39729028-39729081)
chr2 (107-183)||(13477696-13477772)
chr2 (141-193)||(41069670-41069722)
chr2 (112-178)||(36562752-36562818)
chr2 (141-194)||(6752070-6752123)
chr2 (141-193)||(23395975-23396027)
chr2 (141-197)||(40204720-40204776)
chr2 (132-187)||(28640143-28640198)
chr2 (141-187)||(16401126-16401172)
chr2 (141-193)||(11226188-11226240)
[»] chr7 (14 HSPs)
chr7 (138-193)||(32279291-32279346)
chr7 (112-177)||(7352757-7352822)
chr7 (134-187)||(41733686-41733739)
chr7 (141-181)||(43368495-43368535)
chr7 (143-236)||(22815761-22815856)
chr7 (112-193)||(37685187-37685266)
chr7 (141-197)||(11369048-11369104)
chr7 (149-197)||(26825465-26825513)
chr7 (108-179)||(33884054-33884125)
chr7 (141-194)||(9488765-9488819)
chr7 (144-198)||(33957473-33957527)
chr7 (141-194)||(2628432-2628485)
chr7 (134-187)||(44309419-44309472)
chr7 (136-176)||(33747993-33748033)
[»] chr4 (14 HSPs)
chr4 (110-189)||(30643594-30643672)
chr4 (142-193)||(52673195-52673246)
chr4 (131-192)||(29693226-29693287)
chr4 (112-187)||(44015415-44015490)
chr4 (112-193)||(53406486-53406567)
chr4 (141-193)||(46079337-46079389)
chr4 (114-197)||(51853481-51853564)
chr4 (112-162)||(34251239-34251289)
chr4 (141-178)||(1208706-1208743)
chr4 (114-187)||(29724352-29724425)
chr4 (142-187)||(50041817-50041862)
chr4 (142-187)||(50049039-50049084)
chr4 (141-193)||(29544159-29544211)
chr4 (131-167)||(48102184-48102220)
[»] chr6 (6 HSPs)
chr6 (141-187)||(457691-457737)
chr6 (106-187)||(26847147-26847228)
chr6 (110-179)||(3037385-3037454)
chr6 (107-187)||(167185-167265)
chr6 (132-187)||(8585735-8585790)
chr6 (142-187)||(24226101-24226146)
[»] chr8 (8 HSPs)
chr8 (126-187)||(35693442-35693503)
chr8 (141-193)||(4834967-4835019)
chr8 (145-198)||(14847452-14847505)
chr8 (112-196)||(22786558-22786642)
chr8 (114-196)||(20896181-20896263)
chr8 (134-187)||(20224907-20224960)
chr8 (112-165)||(35793182-35793235)
chr8 (142-187)||(44132876-44132921)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 18268033 - 18267791
Alignment:
Q  9 gaagaatatggttcacgtgttgataagatcgttagaggataaccgatgagttgcatttaggtgcctttaactttgatgttattggtatctttgatcatat 108  Q
    |||| |||||||||||||||||||||||  ||||||| ||||||||||||||||| || |||| |||| |||||| |||||||||| |||||| ||||||    
T  18268033 gaagcatatggttcacgtgttgataaga--gttagagaataaccgatgagttgcacttgggtggctttgactttggtgttattggtgtctttgttcatat 18267936  T
Q  109 atatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaactaaaaactcttaaaa 208  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  18267935 atatctctcttaatcattcattatcttttatttaaataatttattttaattattaatccatcattctctcttatctaaaacgaactaaaaactcttaaaa 18267836  T
Q  209 caccaaaccaaagacacccaagtattttatgagaaaactgatagg 253  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  18267835 caccaaaccaaagacacctaagtattttctgagaaaactgatagg 18267791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 33953170 - 33953216
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  33953170 taaataatttattttaattattcatccaccattctctctcatctaaa 33953216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 22658866 - 22658922
Alignment:
Q  138 atttaaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    ||||||||||||||||||||| |||||| ||||||||||| | ||||||| ||||||    
T  22658866 atttaaataatttattttaatcattcattcatcattctctttcatctaaaatgaact 22658922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 31882582 - 31882650
Alignment:
Q  110 tatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctc 178  Q
    ||||||||| ||||||||||  ||| | || |||||||||||||||||||||||||| | |||||||||    
T  31882582 tatctctctaaatcattcattctctctcatctaaataatttattttaattattcatcaaacattctctc 31882650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 22029898 - 22029843
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||| | |||||||    
T  22029898 aaataatttattttaatcattcatccaacattctctctcatctaaaataaactaaa 22029843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 34928827 - 34928888
Alignment:
Q  132 tcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    ||||| || |||||||||||||||||| ||||||  |||||||||||| ||||||| |||||    
T  34928827 tctttcatctaaataatttattttaatcattcatttatcattctctctcatctaaaatgaac 34928888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18623640 - 18623596
Alignment:
Q  136 ttatttaaataatttattttaattattcatccatcattctctctt 180  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  18623640 ttatctaaataatttattttaatcattcatctatcattctctctt 18623596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 19824597 - 19824672
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||| || |||||||  ||| | || |||||||||||||||||| ||||||| | |||||||||| |||||||    
T  19824597 tctctctaaaccattcattctctctcatctaaataatttattttaatcattcatctaacattctctctcatctaaa 19824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 2630883 - 2630810
Alignment:
Q  106 tatatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctct 179  Q
    |||||||||||||||| |||||||  |||   || |||||||||||| || || ||||||||| ||||||||||    
T  2630883 tatatatctctcttaaccattcattctctcacatctaaataatttatgtttatcattcatccaacattctctct 2630810  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 14151991 - 14151939
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| |||||| ||| ||| ||||| ||||||| |||||    
T  14151991 taaataatttattttaatcattcattcattattatctctcatctaaaatgaac 14151939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 26478587 - 26478650
Alignment:
Q  124 attcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||| |||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  26478587 attcattatctttcatttaaatgatttattttaattattcattcatcattctctctcatctaaa 26478650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 45781193 - 45781257
Alignment:
Q  114 tctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctc 178  Q
    ||||||||||| |||| ||||||||  |||||||||||||||||| |||||||||||||| ||||    
T  45781193 tctcttaatcaatcattatcttttacgtaaataatttattttaatcattcatccatcattatctc 45781257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 19431472 - 19431393
Alignment:
Q  108 tatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||||||| || ||||  ||| | || |||||||||||||||||| |||||||||||||||| ||| |||||||    
T  19431472 tatatctctcttaaccaatcattctctctcatctaaataatttattttaatcattcatccatcattctgtctcatctaaa 19431393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 17923868 - 17923924
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||||||||||||||||||||||| |||||||||| ||  ||| |||||||||    
T  17923868 taaataatttattttaattattcatccaacattctctctcataaaaaatgaactaaa 17923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48915033 - 48914981
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  48915033 aaataatttattttaatcattcattcatcattctctctcatctaaaatgaact 48914981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48915424 - 48915372
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  48915424 aaataatttattttaatcattcattcatcattctctctcatctaaaatgaact 48915372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 3950373 - 3950298
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||| | ||  ||||| ||  ||||||||||||||||| ||||||| |||||||||||| |||||||    
T  3950373 tctctcttaatcaattattctctttcatcaaaataatttattttaatcattcatcgatcattctctctcatctaaa 3950298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 24671195 - 24671249
Alignment:
Q  138 atttaaataatttattttaattattcatccatcattctctcttatctaaattgaa 192  Q
    ||||||||||||||||||||| |||||| ||||| ||||||| ||||||| ||||    
T  24671195 atttaaataatttattttaatcattcattcatcactctctctcatctaaaatgaa 24671249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 49177411 - 49177482
Alignment:
Q  115 ctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||| ||||| |||| |||||| || |||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  49177411 ctctcaatcactcattatctttcatctaaataatttattttaatcattcat-catcattttctctcatctaaa 49177482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 26056823 - 26056878
Alignment:
Q  132 tcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||| ||||||||||||||||||||| ||| |||| ||| ||| |||||||    
T  26056823 tcttttattaaaataatttattttaattatttatctatcactctatctcatctaaa 26056878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 50539786 - 50539724
Alignment:
Q  132 tcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    ||||||||||||||||||||||||||| ||  || ||||||| |||||  |||||| ||||||    
T  50539786 tcttttatttaaataatttattttaatcatctattcatcattatctctcttctaaaatgaact 50539724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 15106250 - 15106287
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctc 178  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  15106250 taaataatttattttaatcattcatctatcattctctc 15106287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 44448550 - 44448501
Alignment:
Q  138 atttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||||||| ||||||  |||||||||||  |||||||    
T  44448550 atttaaataatttattttaatcattcatatatcattctctcccatctaaa 44448501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 48915223 - 48915187
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctc 178  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  48915223 aaataatttattttaatcattcattcatcattctctc 48915187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 16278814 - 16278860
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  16278814 taaataatttattttaattattcatccatcattctttcttatctaaa 16278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 46348468 - 46348389
Alignment:
Q  114 tctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    ||||||||||||||||  ||| | ||||||||| ||||| ||||| |||||| ||||||||||||| ||||||| |||||    
T  46348468 tctcttaatcattcattctctctcatttaaatagtttatcttaataattcattcatcattctctctcatctaaaatgaac 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 10688650 - 10688703
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  10688650 taaataatttattttaatcattcattcatcattctctctcatctaaaatgaact 10688703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 39485519 - 39485463
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||||||||||||| ||||||||| | |||||||| ||||||| |||||||||    
T  39485519 taaataatttattttaatcattcatccaaccttctctctcatctaaaatgaactaaa 39485463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 39488555 - 39488498
Alignment:
Q  116 tcttaatcattcataatcttttatttaaataatttattttaattattcatccatcatt 173  Q
    ||||||||| ||||  ||| || ||||||||||||||||||||||||||| |||||||    
T  39488555 tcttaatcaatcattttctcttttttaaataatttattttaattattcattcatcatt 39488498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 197
Target Start/End: Complemental strand, 43168827 - 43168714
Alignment:
Q  80 tttgatgttattggtatctttgatcatatatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctct 179  Q
    |||| |||||||||| | |||| |||||| ||||||||  ||  | |||| |||||| || ||||||||||||||| |||||| ||| || ||||||||     
T  43168827 tttggtgttattggtgtatttgttcatatttatctctc--aactactcattatctttcatctaaataatttatttttattatttatctataattctctc- 43168731  T
Q  180 tatctaaattgaactaaa 197  Q
     ||||||| |||||||||    
T  43168730 -atctaaaatgaactaaa 43168714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 42467006 - 42466972
Alignment:
Q  141 taaataatttattttaattattcatccatcattct 175  Q
    ||||||||||||||||||||||||| |||||||||    
T  42467006 taaataatttattttaattattcattcatcattct 42466972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 47548878 - 47548930
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| || ||| || |||||||||| ||||||| |||||    
T  47548878 taaataatttattttaatcatccattcaacattctctctcatctaaaatgaac 47548930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 32832671 - 32832590
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||| |||||||  ||| | || |||||||||||||||||| ||||||||| |||||||||| ||||||| |||||    
T  32832671 tctctcttaaccattcattctctctcatctaaataatttattttaatcattcatccaacattctctctcatctaaaatgaac 32832590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 39729028 - 39729081
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  39729028 taaataatttattttaatcattcattcatcattctctctcatctaaaatgaact 39729081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 13477772 - 13477696
Alignment:
Q  107 atatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatc 183  Q
    |||| ||||||||||||| |||   ||| | |||||||||| |||||||||| |||||| |||||||||||||||||    
T  13477772 atatttctctcttaatcaatcagtctctctcatttaaataaattattttaatcattcattcatcattctctcttatc 13477696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 41069722 - 41069670
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  41069722 taaataatttattttaatcattcattcatcattctctctcatctaaaatgaac 41069670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 36562818 - 36562752
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctc 178  Q
    ||||||||||||||||||  ||| | || |||||||||||||||| | |||||| ||||||||||||    
T  36562818 tctctcttaatcattcattctctctcatctaaataatttattttactcattcattcatcattctctc 36562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 6752123 - 6752070
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||||| ||||||    
T  6752123 taaataatttattttaatcattcatttatcattctctctcatctaaaatgaact 6752070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 23395975 - 23396027
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||||| |||||    
T  23395975 taaataatttattttaatcattcatttatcattctctctcatctaaaatgaac 23396027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 40204776 - 40204720
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||||||||||||| ||||||| |||||||||||| || |||| | |||||||    
T  40204776 taaataatttattttaataattcatctatcattctctctcatgtaaaataaactaaa 40204720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 28640198 - 28640143
Alignment:
Q  132 tcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||  ||||||||||||||||| ||||||| |||||||||| | |||||||    
T  28640198 tcttttatcaaaataatttattttaatcattcatctatcattctctttcatctaaa 28640143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 16401172 - 16401126
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||||||||||||||| ||||| |||||| ||| |||||||    
T  16401172 taaataatttattttaattatttatccaccattctttctcatctaaa 16401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 11226188 - 11226240
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| |||||| | ||||||||||| || |||| |||||    
T  11226188 taaataatttattttaatcattcattcgtcattctctctcatttaaaatgaac 11226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 32279346 - 32279291
Alignment:
Q  138 atttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||    
T  32279346 atttaaataatttattttaattattcattcatcattttctctcatctaaaatgaac 32279291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 7352757 - 7352822
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctct 177  Q
    |||||||| | |||||||  ||||||||||||||||||||||||||| |||||| || ||||||||    
T  7352757 tctctcttcaccattcattttcttttatttaaataatttattttaatcattcattcaacattctct 7352822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 41733739 - 41733686
Alignment:
Q  134 ttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  41733739 ttttatttaaataaattattttagttattcatcaatctttctctcttatctaaa 41733686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 43368535 - 43368495
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctctta 181  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  43368535 taaataatttattttaatcattcatccatcattctctctta 43368495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 22815856 - 22815761
Alignment:
Q  143 aataatttattttaattattcatccatcattctctcttatctaaattgaactaaa-aactcttaaaacaccaaa-ccaaagacacccaagtatttt 236  Q
    |||||||||||||||| ||| ||||||||||||||||  |  ||| ||||||||| || | | || |||||||| |||||||||||||||||||||    
T  22815856 aataatttattttaatcattgatccatcattctctctcgtagaaaatgaactaaagaaatttaaagacaccaaagccaaagacacccaagtatttt 22815761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 37685266 - 37685187
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||| |||||||  ||| | || |||||||||||||||||| ||||||||| ||||||||||  |||||| |||||    
T  37685266 tctctcttaaccattcat--tctctcatctaaataatttattttaatcattcatccaacattctctctcgtctaaaatgaac 37685187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 11369104 - 11369048
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||||||||||||| ||| ||||| |||||||||| ||||||| |||| ||||    
T  11369104 taaataatttattttaatcatttatccaacattctctctcatctaaaatgaattaaa 11369048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 26825513 - 26825465
Alignment:
Q  149 ttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||||| ||||||||||||||||||||||| |||| | |||||||    
T  26825513 ttattttaatcattcatccatcattctctcttatttaaaataaactaaa 26825465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 33884125 - 33884054
Alignment:
Q  108 tatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctct 179  Q
    ||||| ||||| || |||||||  ||| | || ||||||||||||||||||||| |||||| ||||||||||    
T  33884125 tatatatctctcaaccattcattctctctcatctaaataatttattttaattatccatccaccattctctct 33884054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 9488819 - 9488765
Alignment:
Q  141 taaataatttattttaattattcatccatcattct-ctcttatctaaattgaact 194  Q
    |||||||||||||||||| |||||| ||||||||| |||| ||||||| ||||||    
T  9488819 taaataatttattttaatcattcattcatcattctcctctcatctaaaatgaact 9488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 33957527 - 33957473
Alignment:
Q  144 ataatttattttaattattcatccatcattctctcttatctaaattgaactaaaa 198  Q
    ||||||||||||||| ||||||| |||||||| ||| ||||||| | ||||||||    
T  33957527 ataatttattttaatcattcatctatcattctttctcatctaaaataaactaaaa 33957473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 2628485 - 2628432
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaact 194  Q
    |||||| ||||||||||| ||| || ||||||||||||| ||||||| ||||||    
T  2628485 taaatagtttattttaatcatttattcatcattctctctcatctaaaatgaact 2628432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 44309472 - 44309419
Alignment:
Q  134 ttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||| ||||||||||||||||||||| ||| |||||| ||| | |||||||    
T  44309472 ttttattaaaataatttattttaattatttatctatcattttctttaatctaaa 44309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 33747993 - 33748033
Alignment:
Q  136 ttatttaaataatttattttaattattcatccatcattctc 176  Q
    |||| ||||||||||||||||||| ||||| ||||||||||    
T  33747993 ttatctaaataatttattttaattgttcattcatcattctc 33748033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 30643672 - 30643594
Alignment:
Q  110 tatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaatt 189  Q
    ||||||||||||||| ||||  ||| | || |||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  30643672 tatctctcttaatcaatcattctctctcatctaaataatttattttaatcattcatccatcattatctc-tatctaaatt 30643594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 52673246 - 52673195
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  52673246 aaataatttattttaattattcattcatcattctctctcatctaaaatgaac 52673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 29693226 - 29693287
Alignment:
Q  131 atcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaa 192  Q
    |||| ||||||||||||||||||||||||||| ||  |||||||||||| ||||||| ||||    
T  29693226 atctcttatttaaataatttattttaattatttatttatcattctctctcatctaaaatgaa 29693287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 44015490 - 44015415
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||| || | |||| | || |||||||||||||||||| ||||||| |||||||| ||| |||||||    
T  44015490 tctctcttaatcaatctttatctctcatctaaataatttattttaatcattcatctatcattctttctcatctaaa 44015415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 53406567 - 53406486
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    ||||||||||  ||||||  ||| |||| |||||||||||||||||||||| || ||||||| ||| | ||||||| |||||    
T  53406567 tctctcttaacaattcattttctcttatctaaataatttattttaattatttattcatcattttctttcatctaaaatgaac 53406486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 46079389 - 46079337
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||||| |||||    
T  46079389 taaataatttattttaatcattcattgatcattctctctcatctaaaatgaac 46079337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 51853481 - 51853564
Alignment:
Q  114 tctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaactaaa 197  Q
    |||||||| |||||||  ||| | || ||||||| ||||||||||||||||| || |||||||||| ||  ||| |||||||||    
T  51853481 tctcttaaccattcattttctctcatctaaataagttattttaattattcattcaacattctctctcataaaaaatgaactaaa 51853564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 34251239 - 34251289
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattatt 162  Q
    |||||||||| || |||| || |||||| ||||||||||||||||||||||    
T  34251239 tctctcttaaccaatcattatattttatctaaataatttattttaattatt 34251289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 1208743 - 1208706
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctc 178  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  1208743 taaataatttattttaatcattcattcatcattctctc 1208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 29724425 - 29724352
Alignment:
Q  114 tctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||| || |||| |||| |||| |||||||||||||||||| ||||||  || ||||||| | |||||||    
T  29724425 tctcttaaccactcattatctcttatctaaataatttattttaatcattcatttattattctctatcatctaaa 29724352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 50041862 - 50041817
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  50041862 aaataatttattttaatcattcatctatcattatctctcatctaaa 50041817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 50049084 - 50049039
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  50049084 aaataatttattttaatcattcatctatcattatctctcatctaaa 50049039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 29544211 - 29544159
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| ||||||  |||||| ||||| ||||||| |||||    
T  29544211 taaataatttattttaatcattcatttatcattttctctcatctaaaatgaac 29544159  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 48102184 - 48102220
Alignment:
Q  131 atcttttatttaaataatttattttaattattcatcc 167  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  48102184 atcttttatttaaataatttattttaatcatttatcc 48102220  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 457691 - 457737
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  457691 taaataatttattttaatcattcatccatcattctctctcatctaaa 457737  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 26847147 - 26847228
Alignment:
Q  106 tatatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||| ||||| ||||||| | || |||| |||| |||||||||||||||| | ||||||| |||||||||||| |||||||    
T  26847147 tatatctctcttttaatcaattattatctcttatctaaataatttattttactcattcatctatcattctctctcatctaaa 26847228  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 3037454 - 3037385
Alignment:
Q  110 tatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctct 179  Q
    |||||||||||| |||||||  ||||| || |||| ||||||||||||| ||||||||| |||| |||||    
T  3037454 tatctctcttaaccattcattctctttcatctaaaaaatttattttaatcattcatccaacattttctct 3037385  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 167265 - 167185
Alignment:
Q  107 atatatctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||||||||| |||| |||||||  ||||| |||||||||||||||||||||  ||||  || |||| ||||| |||||||    
T  167265 atatatctcttttaaccattcattttctttcatttaaataatttattttaatctttcaatcaacattatctctcatctaaa 167185  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 8585735 - 8585790
Alignment:
Q  132 tcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||| || ||||| |||||||||||| |||||||||||||||||| | |||||||    
T  8585735 tctttcatctaaatcatttattttaatcattcatccatcattctctttcatctaaa 8585790  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 24226101 - 24226146
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  24226101 aaataatttattttaatcattcatctatcattttctctcatctaaa 24226146  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 35693503 - 35693442
Alignment:
Q  126 tcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    |||| |||||||||||||||||||||||||| | ||||||| ||||||||||| | ||||||    
T  35693503 tcattatcttttatttaaataatttattttactaattcatctatcattctctcctttctaaa 35693442  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 4835019 - 4834967
Alignment:
Q  141 taaataatttattttaattattcatccatcattctctcttatctaaattgaac 193  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| |||||    
T  4835019 taaataatttattttaatcattcattcatcattctctctcatctaaaatgaac 4834967  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 14847452 - 14847505
Alignment:
Q  145 taatttattttaattattcatccatcattctctcttatctaaattgaactaaaa 198  Q
    |||||||||||||| ||||| ||| |||||||||| ||||||| ||||||||||    
T  14847452 taatttattttaatcattcacccaacattctctctcatctaaactgaactaaaa 14847505  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 22786558 - 22786642
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaactaa 196  Q
    ||||| |||| |||||||  ||||| |||||||||||||| |||||||||| ||  |||||||| | | ||||||| ||||||||    
T  22786558 tctcttttaaccattcattctctttcatttaaataatttactttaattatttatttatcattctttttcatctaaaatgaactaa 22786642  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 20896263 - 20896181
Alignment:
Q  114 tctcttaatcattcataatcttttatttaaataatttattttaattattcatccatcattctctcttatctaaattgaactaa 196  Q
    ||||||||||| ||||  ||| | || |||||||||||||||||| ||||||  |||||| ||||| ||||||| || |||||    
T  20896263 tctcttaatcaatcattctctctcatctaaataatttattttaatcattcatatatcattatctctcatctaaaatgcactaa 20896181  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 20224960 - 20224907
Alignment:
Q  134 ttttatttaaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||| ||||||||||||||||||||| ||| |||||| ||| | |||||||    
T  20224960 ttttattaaaataatttattttaattatttatctatcattttctttaatctaaa 20224907  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 35793182 - 35793235
Alignment:
Q  112 tctctcttaatcattcataatcttttatttaaataatttattttaattattcat 165  Q
    ||||||||||  | |||| |||| | ||||||||||||||||||||||||||||    
T  35793182 tctctcttaactactcattatctctcatttaaataatttattttaattattcat 35793235  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 44132921 - 44132876
Alignment:
Q  142 aaataatttattttaattattcatccatcattctctcttatctaaa 187  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||    
T  44132921 aaataatttattttaatcattcatctatcattatctctcatctaaa 44132876  T

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