View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7332_high_51 (Length: 250)
Name: NF7332_high_51
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7332_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36523130 - 36522908
Alignment:
| Q |
1 |
ctacatctccaggtgtacattcagagggttgtcatgttctttgacttccatgtaaccattccatcgccaatagtccaataatgccaagttagtatgacat |
100 |
Q |
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| T |
36523130 |
ctacatctccaggtgtacatgcagagggttgtcatgttctttgacttccatgtaaccattccatcgccaatagtccaataatgccgagttagtatgacat |
36523031 |
T |
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| Q |
101 |
tggacatgtaaatatagaaaactaagaatctgttttattttgatctccctgtgtttaaactaacttctttgatttttcagtatttttataatgtaatttg |
200 |
Q |
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| T |
36523030 |
tggacatgtaaatatagaaaactaagaacctgttttattttgatctccttgtgtttaaactaacttctttgatttttcagtatttttataatgtaatttg |
36522931 |
T |
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| Q |
201 |
taagagtctcaaggaaaaggagc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
36522930 |
taagagtctcaaggaaaaggagc |
36522908 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36529963 - 36529899
Alignment:
| Q |
1 |
ctacatctccaggtgtacattcagagggttgtcatgttctttgacttccatgtaaccattccatc |
65 |
Q |
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||||| |||||||||||||| |||||||||||| ||||| ||||| | |||| ||||||||||| |
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| T |
36529963 |
ctacagctccaggtgtacatgcagagggttgtcctgttccctgactacaatgttaccattccatc |
36529899 |
T |
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