View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7332_low_44 (Length: 276)
Name: NF7332_low_44
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7332_low_44 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 10 - 276
Target Start/End: Original strand, 24436906 - 24437172
Alignment:
| Q |
10 |
attattctatagtcataacctcttctcaaatttaacattttgnnnnnnngaatagagaaatgggtcgcattccatgctgtgagaaggacaatgtgaagag |
109 |
Q |
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| T |
24436906 |
attattctatagtcataacctcttctcaaatttaacattttgaaaaaaagaatagagaaatgggtcgcattccatgctgtgagaaggacaatgtgaagag |
24437005 |
T |
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| Q |
110 |
aggtcagtggacacctgaggaagacaacaagctctcctcttacattgctcaacatggcacccgcaactggcgcctcattccaaagaatgctggttagtcc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24437006 |
aggtcagtggacacctgaggaagacaacaagctctcctcttacattgctcaacatggcacccgcaactggcgcctcattccaaagaatgctggttagtcc |
24437105 |
T |
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| Q |
210 |
ttctccctgttcgtataaatataatctgaatcaatgtcgataaaactaactttaatacttgattttt |
276 |
Q |
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|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
24437106 |
ttctccctattcgtataaatataatctgaatcaatgtcaataaaactaactttaatacttgattttt |
24437172 |
T |
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