View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7332_low_60 (Length: 249)
Name: NF7332_low_60
Description: NF7332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7332_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1415468 - 1415706
Alignment:
| Q |
1 |
agtcttcatccaaggtaattaatccttcattcatattattcttgcttatttaatctcttcattaaaaatatatttctatatttcaaatatgttatgatta |
100 |
Q |
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| T |
1415468 |
agtcttcatccaaggtaattaatccttcattcatattattcttgcttaattaatctcttcattaaaaatatatttctatatttcaaatatgttatgatta |
1415567 |
T |
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| Q |
101 |
ttacgtataatatataggttagtactaaccgtggttgatcggaagttgttgagtttcggttaaaattgtttgaaagaatatgaattgaacctcactaaaa |
200 |
Q |
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| T |
1415568 |
tcacgtataatatataggttaatattaaccacggttgaacggaagttgttaaatttcgattaaaattgtttgaaagaatctgaattgaacctcactaaaa |
1415667 |
T |
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| Q |
201 |
caatcgttagtcagactttaaaattataccaaggttcat |
239 |
Q |
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| T |
1415668 |
cgatcgttagtcagactttaaaattataccaagcttcat |
1415706 |
T |
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