View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7333_high_15 (Length: 241)
Name: NF7333_high_15
Description: NF7333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7333_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10236728 - 10236506
Alignment:
| Q |
1 |
cccggaacacggcccatcaacctctctgcaataaacgtattaaaaatcctattccaacaagacaagcttctaacaggcatttcatcaaacacattaacgg |
100 |
Q |
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| T |
10236728 |
cccggaacacggcccatcaacctctctgcaataaacgtattaaaaatcctattccaacaagacaagcttctaataggcatttcatcaaacacattaacgg |
10236629 |
T |
|
| Q |
101 |
cacaattcaaatcaccaaatgcaagataaaaatctataagcctttcacacaaaaccacttcatcacaaaaacccatcttcagaatcttcccatgaagctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10236628 |
cacaattcaaatcaccaaatgcaagataaaaatctataagcctttcacataaaaccacttcatcacaaaaacccatcttcagaatcttcccatgaagctt |
10236529 |
T |
|
| Q |
201 |
caaaccatcataaaacgacctag |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
10236528 |
caaaccatcataaaacgacctag |
10236506 |
T |
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