View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7333_high_7 (Length: 387)
Name: NF7333_high_7
Description: NF7333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7333_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 10237074 - 10236705
Alignment:
| Q |
1 |
agtgggacagattcctgatgtatgcatctgacaaaacagaagcatcgcttcttcttcatacccattttgcgataaaccggatatcatagccacccaagaa |
100 |
Q |
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| T |
10237074 |
agtgggacagattcctgatgtatgcatctgacaaaacagaagcattgcttcttcttcatacccattttgcgataaaccggatatcatagccacccaagaa |
10236975 |
T |
|
| Q |
101 |
acactatcccttgcctttaaattttcaaaaaccttcttagcagaactcaaaaaaccatttttaaaatagagatcaatcaaaggattacatataaaagtac |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10236974 |
acactatccctcgcctttaaattttcaaaaaccttcttagcagaactcaaaaaaccatttttaaaatagagatcaatcaaaggattacatataaaagtac |
10236875 |
T |
|
| Q |
201 |
tactttcaaaaccacaggttatagtcttagcatgtatttgctcaacaaagcaaaaaggaactgcattgccactacaacccctcaaaaccacagcaaaaat |
300 |
Q |
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|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
10236874 |
tactttcaaaaccactcgttatagtcttagcatgtatttgctcaacaaagcgaaaagaaactgcattgccactacaacccctcaaaaccacagcaaaaat |
10236775 |
T |
|
| Q |
301 |
cctctcatcgaactccaaatttttcgttaacattcgccggaacaaacccggaacacggcccatcatcctc |
370 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10236774 |
cctctcatcgaactccacatttttcgttaacattcgccggaacaaacccggaacacggcccatcaacctc |
10236705 |
T |
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