View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7333_high_8 (Length: 374)

Name: NF7333_high_8
Description: NF7333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7333_high_8
NF7333_high_8
[»] chr1 (55 HSPs)
chr1 (4-374)||(44518802-44519155)
chr1 (253-343)||(26469457-26469547)
chr1 (258-374)||(33100875-33100991)
chr1 (256-373)||(35369768-35369885)
chr1 (258-374)||(649836-649952)
chr1 (264-354)||(50932391-50932481)
chr1 (258-331)||(27464945-27465018)
chr1 (258-328)||(45121369-45121439)
chr1 (258-343)||(19055647-19055732)
chr1 (258-374)||(31088248-31088364)
chr1 (257-345)||(37619640-37619728)
chr1 (258-333)||(48470747-48470822)
chr1 (248-358)||(45333794-45333904)
chr1 (258-331)||(52576189-52576263)
chr1 (254-343)||(8350083-8350171)
chr1 (258-331)||(23645521-23645594)
chr1 (258-374)||(37274921-37275037)
chr1 (256-374)||(50726134-50726252)
chr1 (258-343)||(21401496-21401581)
chr1 (251-343)||(44914452-44914545)
chr1 (264-331)||(3851268-3851335)
chr1 (257-340)||(3981913-3981996)
chr1 (256-354)||(37685416-37685514)
chr1 (256-354)||(37700004-37700102)
chr1 (261-343)||(43775304-43775386)
chr1 (258-343)||(9566848-9566933)
chr1 (258-354)||(45640389-45640484)
chr1 (251-343)||(46907293-46907385)
chr1 (258-344)||(2571732-2571819)
chr1 (256-331)||(15469943-15470017)
chr1 (258-354)||(51718518-51718610)
chr1 (255-333)||(19947629-19947707)
chr1 (258-374)||(15082939-15083054)
chr1 (258-371)||(18434865-18434978)
chr1 (251-343)||(2269453-2269545)
chr1 (262-325)||(40861154-40861217)
chr1 (261-312)||(50333337-50333388)
chr1 (256-289)||(6693297-6693330)
chr1 (264-345)||(6809676-6809757)
chr1 (258-331)||(30735181-30735254)
chr1 (258-343)||(31827049-31827134)
chr1 (258-294)||(41677224-41677260)
chr1 (258-293)||(29359773-29359808)
chr1 (297-343)||(6693255-6693301)
chr1 (258-343)||(8828012-8828094)
chr1 (259-345)||(30570620-30570706)
chr1 (257-343)||(51571233-51571319)
chr1 (264-317)||(26020970-26021023)
chr1 (257-342)||(26207940-26208025)
chr1 (257-333)||(48103249-48103326)
chr1 (258-315)||(49647039-49647096)
chr1 (303-371)||(27533417-27533485)
chr1 (258-354)||(30467421-30467517)
chr1 (258-358)||(44517849-44517949)
chr1 (259-343)||(49065253-49065337)
[»] chr2 (37 HSPs)
chr2 (258-374)||(32477399-32477515)
chr2 (250-372)||(41195653-41195776)
chr2 (258-358)||(22888705-22888805)
chr2 (258-373)||(42421786-42421901)
chr2 (253-354)||(2076656-2076757)
chr2 (258-374)||(9647199-9647315)
chr2 (258-374)||(18254097-18254213)
chr2 (258-354)||(37737859-37737955)
chr2 (261-343)||(6049236-6049318)
chr2 (253-343)||(43487477-43487567)
chr2 (258-331)||(1248796-1248869)
chr2 (259-374)||(34944979-34945094)
chr2 (257-374)||(3838767-3838884)
chr2 (258-331)||(9194351-9194424)
chr2 (258-331)||(9760128-9760201)
chr2 (251-343)||(3097742-3097834)
chr2 (259-331)||(9207700-9207772)
chr2 (258-330)||(21611543-21611615)
chr2 (251-343)||(25270463-25270555)
chr2 (258-354)||(27490618-27490714)
chr2 (258-374)||(41042321-41042437)
chr2 (259-343)||(41056636-41056720)
chr2 (258-327)||(9990805-9990874)
chr2 (251-343)||(13333051-13333143)
chr2 (258-331)||(19633392-19633466)
chr2 (258-331)||(19830293-19830367)
chr2 (257-354)||(7698258-7698355)
chr2 (261-343)||(42091393-42091477)
chr2 (252-343)||(28494958-28495049)
chr2 (270-354)||(19108993-19109077)
chr2 (258-343)||(7663955-7664039)
chr2 (258-293)||(22416349-22416384)
chr2 (257-339)||(14255405-14255487)
chr2 (261-294)||(10060339-10060372)
chr2 (259-352)||(29349595-29349688)
chr2 (262-354)||(19642685-19642777)
chr2 (253-345)||(39147862-39147954)
[»] chr4 (51 HSPs)
chr4 (257-343)||(53801646-53801732)
chr4 (256-343)||(43175082-43175169)
chr4 (261-374)||(11068755-11068868)
chr4 (258-343)||(29175323-29175408)
chr4 (258-331)||(44539844-44539917)
chr4 (258-354)||(39440571-39440667)
chr4 (258-343)||(15175644-15175729)
chr4 (258-331)||(51986152-51986225)
chr4 (258-374)||(37297116-37297231)
chr4 (252-331)||(23369214-23369293)
chr4 (245-371)||(31641440-31641566)
chr4 (258-331)||(26732335-26732408)
chr4 (262-343)||(27050978-27051059)
chr4 (266-343)||(38134451-38134528)
chr4 (261-373)||(24575742-24575854)
chr4 (258-354)||(39478524-39478620)
chr4 (258-343)||(26724860-26724945)
chr4 (251-343)||(38382419-38382511)
chr4 (251-343)||(47181939-47182031)
chr4 (251-343)||(48402078-48402170)
chr4 (256-331)||(46213080-46213155)
chr4 (258-331)||(5622568-5622641)
chr4 (261-374)||(10250406-10250519)
chr4 (258-331)||(36178016-36178089)
chr4 (254-327)||(39606086-39606159)
chr4 (262-374)||(37997321-37997433)
chr4 (251-342)||(56363926-56364017)
chr4 (258-343)||(27965085-27965168)
chr4 (256-354)||(38376376-38376474)
chr4 (258-327)||(26492121-26492190)
chr4 (251-343)||(34616659-34616751)
chr4 (261-343)||(19473847-19473929)
chr4 (247-354)||(46634187-46634282)
chr4 (258-343)||(42853675-42853760)
chr4 (257-293)||(42360292-42360328)
chr4 (257-297)||(53786102-53786142)
chr4 (258-328)||(2575678-2575748)
chr4 (258-328)||(39195170-39195240)
chr4 (264-358)||(45083056-45083149)
chr4 (297-371)||(50608551-50608625)
chr4 (261-297)||(25123178-25123214)
chr4 (258-374)||(40348861-40348972)
chr4 (261-317)||(49449036-49449092)
chr4 (258-354)||(50831643-50831739)
chr4 (258-293)||(2268407-2268442)
chr4 (297-343)||(2268434-2268480)
chr4 (297-343)||(29531533-29531579)
chr4 (253-330)||(38510656-38510731)
chr4 (258-343)||(515533-515618)
chr4 (257-317)||(5233557-5233617)
chr4 (258-354)||(10474000-10474096)
[»] chr5 (33 HSPs)
chr5 (253-354)||(41321342-41321443)
chr5 (258-354)||(33037607-33037703)
chr5 (256-343)||(7287075-7287162)
chr5 (259-373)||(1764292-1764406)
chr5 (258-343)||(1671640-1671725)
chr5 (258-331)||(18258681-18258754)
chr5 (253-374)||(26791127-26791248)
chr5 (258-374)||(5168250-5168366)
chr5 (256-371)||(2972394-2972509)
chr5 (257-331)||(28306019-28306093)
chr5 (258-374)||(36739015-36739131)
chr5 (259-354)||(13168609-13168704)
chr5 (256-374)||(14923140-14923258)
chr5 (258-324)||(35634723-35634789)
chr5 (266-327)||(7076464-7076525)
chr5 (258-343)||(8686989-8687074)
chr5 (258-343)||(28467341-28467426)
chr5 (251-343)||(17626084-17626176)
chr5 (253-372)||(1274427-1274545)
chr5 (258-345)||(7552855-7552942)
chr5 (258-331)||(14051203-14051276)
chr5 (257-333)||(15479577-15479653)
chr5 (258-343)||(22972215-22972300)
chr5 (258-333)||(3565192-3565267)
chr5 (260-371)||(39054657-39054768)
chr5 (261-343)||(13309981-13310063)
chr5 (258-374)||(18660826-18660941)
chr5 (258-328)||(39591793-39591863)
chr5 (258-328)||(39592185-39592255)
chr5 (259-326)||(42175034-42175101)
chr5 (258-292)||(1079852-1079886)
chr5 (287-343)||(21353242-21353298)
chr5 (258-294)||(35646518-35646554)
[»] scaffold0098 (1 HSPs)
scaffold0098 (255-343)||(49393-49481)
[»] chr7 (29 HSPs)
chr7 (256-374)||(38956504-38956622)
chr7 (258-343)||(24614204-24614289)
chr7 (258-354)||(3937011-3937107)
chr7 (258-374)||(44895460-44895576)
chr7 (258-343)||(25192805-25192890)
chr7 (258-343)||(41189429-41189516)
chr7 (251-343)||(46022148-46022240)
chr7 (256-317)||(41989626-41989687)
chr7 (251-343)||(7701642-7701734)
chr7 (259-331)||(32529745-32529817)
chr7 (257-374)||(22918056-22918173)
chr7 (258-374)||(40112842-40112958)
chr7 (258-330)||(43942743-43942815)
chr7 (258-328)||(43025453-43025523)
chr7 (254-343)||(40417872-40417961)
chr7 (255-374)||(44189196-44189314)
chr7 (257-327)||(45851094-45851164)
chr7 (256-345)||(46578021-46578110)
chr7 (258-354)||(35072250-35072346)
chr7 (258-354)||(35098591-35098687)
chr7 (259-358)||(47391214-47391313)
chr7 (258-371)||(41018734-41018847)
chr7 (258-317)||(3614334-3614393)
chr7 (258-293)||(38073356-38073391)
chr7 (297-343)||(38073318-38073364)
chr7 (259-317)||(38944921-38944979)
chr7 (256-342)||(43159461-43159547)
chr7 (256-333)||(9428524-9428601)
chr7 (258-343)||(48062155-48062240)
[»] chr3 (58 HSPs)
chr3 (258-356)||(32924169-32924267)
chr3 (258-374)||(27541390-27541506)
chr3 (255-354)||(37503632-37503731)
chr3 (258-343)||(42356972-42357057)
chr3 (261-354)||(42358529-42358622)
chr3 (255-331)||(16969451-16969527)
chr3 (259-343)||(35597260-35597344)
chr3 (258-374)||(44413283-44413399)
chr3 (258-374)||(52939718-52939834)
chr3 (256-331)||(13735840-13735915)
chr3 (258-372)||(44856022-44856136)
chr3 (258-374)||(38926695-38926811)
chr3 (258-374)||(41309184-41309300)
chr3 (256-331)||(5244339-5244414)
chr3 (258-373)||(52254026-52254141)
chr3 (256-374)||(19149057-19149175)
chr3 (257-331)||(36670901-36670975)
chr3 (258-343)||(33939336-33939421)
chr3 (258-331)||(47472439-47472512)
chr3 (258-343)||(55151605-55151690)
chr3 (251-343)||(21217610-21217702)
chr3 (251-343)||(37056938-37057030)
chr3 (259-358)||(24256660-24256759)
chr3 (281-374)||(20547901-20547994)
chr3 (258-331)||(26014922-26014995)
chr3 (258-371)||(35376969-35377082)
chr3 (251-344)||(44383286-44383379)
chr3 (258-343)||(46624005-46624090)
chr3 (258-331)||(52326129-52326202)
chr3 (258-374)||(5114145-5114261)
chr3 (259-343)||(23592556-23592640)
chr3 (257-328)||(7934087-7934158)
chr3 (261-343)||(8847208-8847289)
chr3 (258-372)||(37302615-37302729)
chr3 (258-343)||(13348022-13348107)
chr3 (258-333)||(31157565-31157640)
chr3 (257-343)||(288824-288910)
chr3 (261-314)||(7668079-7668132)
chr3 (258-331)||(44813246-44813319)
chr3 (258-345)||(44445390-44445477)
chr3 (259-332)||(23600702-23600775)
chr3 (258-343)||(25641471-25641556)
chr3 (259-327)||(28539629-28539697)
chr3 (297-374)||(41505558-41505635)
chr3 (258-343)||(42889083-42889168)
chr3 (262-354)||(11630642-11630734)
chr3 (286-374)||(16129589-16129677)
chr3 (257-293)||(41505627-41505663)
chr3 (260-352)||(44463446-44463538)
chr3 (253-316)||(9719331-9719394)
chr3 (261-315)||(39629729-39629783)
chr3 (286-340)||(45711355-45711409)
chr3 (258-343)||(14226593-14226678)
chr3 (258-312)||(42478086-42478142)
chr3 (258-343)||(51982197-51982282)
chr3 (262-358)||(12762581-12762677)
chr3 (259-343)||(35201323-35201407)
chr3 (257-337)||(42997389-42997469)
[»] chr6 (23 HSPs)
chr6 (257-374)||(552860-552977)
chr6 (258-343)||(33430250-33430335)
chr6 (258-343)||(15974706-15974791)
chr6 (258-343)||(32316816-32316901)
chr6 (257-345)||(5694038-5694126)
chr6 (256-343)||(31077892-31077979)
chr6 (255-373)||(14818000-14818118)
chr6 (263-374)||(18737460-18737571)
chr6 (258-354)||(13689882-13689978)
chr6 (251-343)||(16199548-16199640)
chr6 (259-374)||(11612255-11612370)
chr6 (258-343)||(26595447-26595532)
chr6 (256-371)||(22079449-22079564)
chr6 (258-343)||(30457603-30457688)
chr6 (258-343)||(34047485-34047570)
chr6 (258-356)||(33603168-33603266)
chr6 (258-371)||(1156790-1156903)
chr6 (258-354)||(277078-277174)
chr6 (269-354)||(3853206-3853291)
chr6 (258-293)||(8098497-8098532)
chr6 (297-343)||(5080494-5080540)
chr6 (253-354)||(4820454-4820555)
chr6 (253-343)||(17551262-17551351)
[»] chr8 (27 HSPs)
chr8 (258-374)||(37449313-37449429)
chr8 (255-374)||(4054171-4054290)
chr8 (257-374)||(22719507-22719624)
chr8 (253-374)||(27325825-27325946)
chr8 (261-354)||(32501087-32501180)
chr8 (261-354)||(36816507-36816600)
chr8 (258-354)||(34186694-34186790)
chr8 (258-328)||(12898817-12898887)
chr8 (258-341)||(24479323-24479406)
chr8 (257-343)||(42768302-42768388)
chr8 (258-343)||(29025358-29025443)
chr8 (264-374)||(5277393-5277503)
chr8 (264-342)||(36251425-36251503)
chr8 (254-343)||(7271948-7272037)
chr8 (258-343)||(11253430-11253515)
chr8 (258-354)||(37133750-37133846)
chr8 (259-374)||(36660339-36660454)
chr8 (262-354)||(43397868-43397960)
chr8 (259-339)||(32133425-32133505)
chr8 (252-343)||(7598807-7598897)
chr8 (257-343)||(23754593-23754679)
chr8 (297-374)||(10731613-10731690)
chr8 (258-343)||(13106578-13106663)
chr8 (258-317)||(10692555-10692614)
chr8 (258-293)||(31249424-31249459)
chr8 (258-292)||(10731683-10731717)
chr8 (259-296)||(10963663-10963700)
[»] scaffold0199 (1 HSPs)
scaffold0199 (258-343)||(8766-8851)
[»] scaffold0056 (1 HSPs)
scaffold0056 (258-331)||(76507-76580)
[»] scaffold0519 (1 HSPs)
scaffold0519 (258-343)||(11880-11965)
[»] scaffold0087 (1 HSPs)
scaffold0087 (256-343)||(53247-53334)
[»] scaffold0041 (1 HSPs)
scaffold0041 (297-374)||(10890-10967)
[»] scaffold0148 (1 HSPs)
scaffold0148 (258-314)||(20789-20845)


Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 4 - 374
Target Start/End: Original strand, 44518802 - 44519155
Alignment:
Q  4 cattataggtccttaaattatgtaaatgacaccagctagaaaagtaatgctatctcaagtagcataatcaaatgccttagccatttgtacgtgtaattaa 103  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44518802 cattataggtccttaaattatgtaaatgacactagctagaaaagtaatgctatctcaagtagcataatcaaatgccttagccatttgtacgtgtaattaa 44518901  T
Q  104 ttttcgtccgcataagcgtgctagtgaaagtattcaaataaatgatgtaggacttgtacgttggtgaaaattacaaagaagctaacatctacacacatgt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44518902 ttttcgtccgcataagcgtgctagtgaaagtattcaaataaatgatgtaggacttgtacgttggtgaaaattacaaagaagctaacatctacacacatgt 44519001  T
Q  204 gcaccgtatgaagctttcatctttgtaatatatctatgagtgtaatatatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgata 303  Q
    ||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44519002 gcaccgtatgaagctttcatctttgt-----------------aatatatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgata 44519084  T
Q  304 accaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||| |||| ||| || ||| ||||||||    
T  44519085 accaaaattttacaaaggaaatgaggtattagcacaaaaatcaaagcaatagagagagaaagtaaaaagat 44519155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 26469547 - 26469457
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||    
T  26469547 tttatgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 26469457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 33100991 - 33100875
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| | ||||||||||| ||  |||| ||    
T  33100991 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaaacaatagag 33100892  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  33100891 agagaaagtaaaaagat 33100875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 35369885 - 35369768
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||| | ||||||||||| ||| ||||     
T  35369885 atgaggtgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaagcaatag 35369786  T
Q  356 agacagcaagaaaaaaga 373  Q
    ||| || ||| |||||||    
T  35369785 agagagaaagtaaaaaga 35369768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 649952 - 649836
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| | ||| |||| ||    
T  649952 gagttgtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagag 649853  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  649852 agagaaagtaaaaagat 649836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 50932481 - 50932391
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||    
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaatcaaagcaata 50932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 27464945 - 27465018
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  27464945 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 27465018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 45121369 - 45121439
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  45121369 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 45121439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 19055647 - 19055732
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||  ||||||||    
T  19055647 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaa 19055732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 31088364 - 31088248
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |  |||||||||| |  |||||||| | ||| |||| ||    
T  31088364 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaaccaaagcaatagag 31088265  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  31088264 agagaaagtaaaaagat 31088248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 37619728 - 37619640
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    |||||| |||||||||||||| ||||||||||||||||||| | | ||||||||||||||| |||||||||||||||  ||||||||||    
T  37619728 tgagttatgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaatc 37619640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 48470822 - 48470747
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||| ||||    
T  48470822 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatatt 48470747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 45333904 - 45333794
Alignment:
Q  248 atatatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatcta 347  Q
    |||||||| ||| |||||||||||||||||  |||||||||| || |||||||| ||  ||||||||||| ||||||||||||| | ||||||||||| |    
T  45333904 atatatttttgaattgtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaatcaa 45333805  T
Q  348 agtaataaaga 358  Q
    || ||||||||    
T  45333804 agcaataaaga 45333794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 52576189 - 52576263
Alignment:
Q  258 gagttgtgttatttgaaca-ttcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  52576189 gagttgtgttatttgaacaattcatataggtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 52576263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 8350083 - 8350171
Alignment:
Q  254 ttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||| ||||||| ||||| | |||||||||    
T  8350083 ttatgagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaa-tttacaaaggaaataaggtagtgacacaaaaa 8350171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 23645594 - 23645521
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  23645594 gagttatgttatttgaacatacatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 23645521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 37274921 - 37275037
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| | || |||||||||||||||||| || ||||||||| || ||||||||||||| | ||||||||| | ||| |||| ||    
T  37274921 gagttgtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagcaatagag 37275020  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  37275021 aaagaaagtaaaaagat 37275037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 50726134 - 50726252
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    |||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||| || || |||||||||| |  |||||||||| ||  ||||     
T  50726134 atgagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaatcaaaacaatag 50726233  T
Q  356 agacagcaagaaaaaagat 374  Q
    ||| || ||| ||||||||    
T  50726234 agagagaaagtaaaaagat 50726252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 21401581 - 21401496
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||| ||||||||||||||||  | || |||||||||||| || |||||||||||| |||||||||    
T  21401581 gagttgtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtattgacacaaaaa 21401496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 44914452 - 44914545
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaa-cttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||||||||||||||  ||||| || || |||||||||||| ||||||||||||| | |||||||||    
T  44914452 tatttaggagttgtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaa 44914545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 3851335 - 3851268
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||| | |||||||||||||    
T  3851335 tgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttataaaggaaatgaggta 3851268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 3981913 - 3981996
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaa 340  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||| || |||||||||||| || ||||||| |||| ||||||    
T  3981913 tgagttgtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttacaaagaaaatgagatattgacacaa 3981996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 37685514 - 37685416
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||| ||||||||||||||||||| |||||| || |||||||| ||  ||||||||||| | ||||||||||| | ||||||||||| ||| ||||    
T  37685514 atgagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37685416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 37700004 - 37700102
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||| ||||||||||||||||||| |||||| || |||||||| ||  ||||||||||| | ||||||||||| | ||||||||||| ||| ||||    
T  37700004 atgagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 43775386 - 43775304
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||| |||||||||||||||||||||| ||| || |||||||||||| || ||||||| |||| | |||||||    
T  43775386 ttgtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttacaaagaaaatgagatattgatacaaaaa 43775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 9566848 - 9566933
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||  ||| |||||||||||| || ||||||||||||||| || ||||  |||||| |||||||||    
T  9566848 gagttgtgttatttgaacattcaattatatgacaacttttgagacaaccaaaattttacatagaaaatagggtattgacacaaaaa 9566933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 45640484 - 45640389
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||||||  ||||||||||||||||||||   ||||||||||||||| | |||||||| ||||  |||||||||| ||| ||||    
T  45640484 gagttgtgttatttgaacatctatatatgtgacaacttttgttgcaaccaaaattttaca-aagaaatgagatattggcacaaaaatcaaagcaata 45640389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 46907385 - 46907293
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| |||  ||||||||||| || || |||||||||| | || |||||||||||| |||||||||    
T  46907385 tatttaagagttgtgttatttgaacatccatttatacgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 46907293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 2571819 - 2571732
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatttt-acacaggaaatgaggtattaacacaaaaat 344  Q
    |||||||||||||||||||| |||  || ||||||||||||||| |||||||||||| ||| || |||||||||| | ||||||||||    
T  2571819 gagttgtgttatttgaacatccatgcatatgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaat 2571732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 15469943 - 15470017
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||||||||||||||||| || |||||||| ||  ||||||||| | |||||||||||||    
T  15469943 atgagttgtgttatttgaacattcatatatgtgataa-ttttgtgacaattaaaattttataaaggaaatgaggta 15470017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 51718518 - 51718610
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| |||    |||||||||||||||||||| |||| |||||| ||||||||| ||| | ||||||||||| || |||||    
T  51718518 gagttgtgttatttgaacatccat----gtgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaatcaaaataata 51718610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 19947629 - 19947707
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    |||||||||||||||||||||||| || ||| |||||||||||| || ||||||||||||| | || ||| ||||||||    
T  19947629 tatgagttgtgttatttgaacatttatttatatgacaacttttgagacaaccaaaattttataaagaaaaggaggtatt 19947707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 15082939 - 15083054
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||| ||||| |||||||||||||||| | ||||||||| | || |||| ||||||| ||||||||| ||||| ||||||||| | ||| |||| ||    
T  15082939 gagttgtattattcgaacattcatatatgtcaaaacttttgt-acaatcaaacttttacaaaggaaatgaagtattgacacaaaaaccaaagcaatagag 15083037  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  15083038 agagaaagtaaaaagat 15083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 18434978 - 18434865
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||| ||  || ||  ||||||||||||||| |||||||||||| || || |||||| |||||  |||||||||| ||  |||||||    
T  18434978 gagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaaacaataaag 18434879  T
Q  358 acagcaagaaaaaa 371  Q
    | || ||| |||||    
T  18434878 agagaaagtaaaaa 18434865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 2269453 - 2269545
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| ||||||||||||||||| |||||  ||| ||||||||||||  | |||||||||||||   || |||| ||||||| |||||||||    
T  2269453 tatttaagagttgtgttatttgaatattcaattatatgacaacttttgatacaaccaaaattttatttagaaaataaggtattgacacaaaaa 2269545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 40861154 - 40861217
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaat 325  Q
    ||||||||||||||||  ||||||||| |||||||||||| ||| ||||||||| | |||||||    
T  40861154 tgtgttatttgaacatctatatatgtgtcaacttttgtgacaactaaaattttataaaggaaat 40861217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 50333388 - 50333337
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatt 312  Q
    ||||||||||| | ||| ||||||||||||||||||||||| ||||||||||    
T  50333388 ttgtgttatttaaccatccatatatgtgacaacttttgtgacaaccaaaatt 50333337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 6693330 - 6693297
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtga 289  Q
    ||||||||||||||||||||||||||||||||||    
T  6693330 atgagttgtgttatttgaacattcatatatgtga 6693297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 6809757 - 6809676
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    |||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || ||||||   |||| ||||||||||    
T  6809757 tgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttatatagaaaatgatacattagcacaaaaatc 6809676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 30735181 - 30735254
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||| || ||| ||||||| || |||||||| || |||||||||| | || ||||||||||    
T  30735181 gagttgtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaattttataaagtaaatgaggta 30735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 31827134 - 31827049
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||  || ||  ||||||||||||  | ||||||||||||||| |  ||||||| |||| |||||||||    
T  31827134 gagttgtgttatttgaacatctatttagatgacaacttttgatacaaccaaaattttacaaaaaaaatgagttattgacacaaaaa 31827049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 41677224 - 41677260
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaact 294  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41677224 gagttgtgttatttgaacatccatatatgtgacaact 41677260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 29359808 - 29359773
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||||||||||| |||||||    
T  29359808 gagttgtgttatttgaacattcatatatatgacaac 29359773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 6693301 - 6693255
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||| |||||||||||| ||||||||||||||| ||| |||||    
T  6693301 tgtgataatcaaaattttacaaaggaaatgaggtattgacataaaaa 6693255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 8828012 - 8828094
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||  ||  ||||||||| ||||| || ||||||||||||| | | |||||||||||||  ||||||||    
T  8828012 gagttgtgttatttgaacat--atc-atgtgacaatttttgcgacaaccaaaattttataaaagaaatgaggtattggcacaaaaa 8828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 30570706 - 30570620
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    ||||||||||||||||||||||| ||| ||| || |||||  | || |||||||||||| || ||  ||| ||||| ||||||||||    
T  30570706 agttgtgttatttgaacattcatttatatgataatttttgaaacaatcaaaattttacaaagaaatcgagatattagcacaaaaatc 30570620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 51571233 - 51571319
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||  ||| |   |||||| ||||| || ||||| ||||||||| || ||| |||||||| |||||||||    
T  51571233 tgagttgtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtattgacacaaaaa 51571319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 26020970 - 26021023
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    |||||||||||||||||| ||| ||||| |||||| || || ||||||||||||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttaca 26021023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 26208025 - 26207940
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaa 342  Q
    |||||||||||||||||||||  || ||  | | |||||||||||||| ||||||||| || || |||||| ||||| ||| ||||    
T  26208025 tgagttgtgttatttgaacatctatttagattataacttttgtgataatcaaaattttgcaaagaaaatgatgtattgacataaaa 26207940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 48103249 - 48103326
Alignment:
Q  257 tgagttgtgttatttgaa-cattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    ||||||||| |||||||| |||  || ||| |||||||||||| || ||||||||||||||| || |||| |||||||    
T  48103249 tgagttgtgatatttgaaacatctatttatatgacaacttttgagacaaccaaaattttacaaagaaaataaggtatt 48103326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 49647039 - 49647096
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatttta 315  Q
    ||||| |||||||||||||||||| ||| ||||||||||||  | ||| |||||||||    
T  49647039 gagttatgttatttgaacattcatttatatgacaacttttgaaacaactaaaatttta 49647096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 27533417 - 27533485
Alignment:
Q  303 aaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaa 371  Q
    ||||||||||||||| || |||||||||||| ||| ||||||| ||  |||||||| || ||| |||||    
T  27533417 aaccaaaattttacaaagaaaatgaggtattgacataaaaatcaaaacaataaagagagaaagtaaaaa 27533485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 30467421 - 30467517
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||||||  |  ||| ||||||||||||||| ||| ||| ||||||| || ||| |||  ||| ||||| ||||| ||| ||||    
T  30467421 gagttgtgttatttgaacatctaattatatgacaacttttgtgacaactaaagttttacaaagaaaacgagagattgacacacaaatcaaagcaata 30467517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 358
Target Start/End: Original strand, 44517849 - 44517949
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||  |||   ||||| |||||||| |||||| | || |||||| || |||  | ||||| ||||||||||| || ||||||||    
T  44517849 gagttgtgttatttgaacaaccattcgtgtgataacttttgggataactataaatttacaaagaaaaatatgtattgacacaaaaatcaaaataataaag 44517948  T
Q  358 a 358  Q
    |    
T  44517949 a 44517949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 49065253 - 49065337
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||| ||  || ||| |||||| |||   |||||||||||||||||| || |||||| |||||  ||||||||    
T  49065253 agttgtgttatttgaatatctatttatatgacaattttaaagataaccaaaattttacaaagaaaatgaagtattggcacaaaaa 49065337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 32477515 - 32477399
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| | ||||||||| ||| |||| ||    
T  32477515 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggtattcatacaaaaatcaaagcaatatag 32477416  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  32477415 agagaaagtaaaaagat 32477399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 250 - 372
Target Start/End: Complemental strand, 41195776 - 41195653
Alignment:
Q  250 atatttat-gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaa 348  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||| | ||    
T  41195776 atatttatagagttgtgttatttgaacattcatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaa 41195677  T
Q  349 gtaataaagacagcaagaaaaaag 372  Q
    | |||| ||| || ||| ||||||    
T  41195676 gcaatagagagagaaagtaaaaag 41195653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 358
Target Start/End: Original strand, 22888705 - 22888805
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||||  |||||||| | ||| |||||||    
T  22888705 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaataaag 22888804  T
Q  358 a 358  Q
    |    
T  22888805 a 22888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 42421786 - 42421901
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |  |||||| | | ||| |||||||    
T  42421786 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaacaccaaagcaataaag 42421885  T
Q  358 acagcaagaaaaaaga 373  Q
    | || ||| |||||||    
T  42421886 agagaaagtaaaaaga 42421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 2076757 - 2076656
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| ||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||| ||| ||    
T  2076757 tttaagagttgtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaa 2076658  T
Q  353 ta 354  Q
    ||    
T  2076657 ta 2076656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 9647315 - 9647199
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| | ||||||||| | ||| |||| ||    
T  9647315 gagttgtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaaccaaagcaatagag 9647216  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  9647215 agagaaagtaaaaagat 9647199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 18254097 - 18254213
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| || |  |||||||| | ||| |||| ||    
T  18254097 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaatagag 18254196  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  18254197 agagaaagtaaaaagat 18254213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 37737859 - 37737955
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||| |||||||||| |||| ||||||||||| ||| ||||    
T  37737859 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacaaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaagcaata 37737955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 6049236 - 6049318
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||||  ||||||||    
T  6049236 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaa 6049318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 43487567 - 43487477
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||| | |||||||||    
T  43487567 tttaagagttgtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 43487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 1248869 - 1248796
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  1248869 gagttgtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaggta 1248796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 34944979 - 34945094
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| |  |||||||||| ||| |||| |||    
T  34944979 agttgtgttaattgaatattcatatatgtgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaatcaaagcaatagaga 34945078  T
Q  359 cagcaagaaaaaagat 374  Q
     || ||| ||||||||    
T  34945079 gagaaagtaaaaagat 34945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 374
Target Start/End: Original strand, 3838767 - 3838884
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||| ||||||||| | | | ||||||||||| ||  |||| |    
T  3838767 tgagttgtgttatttgaacatctatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaagcagtgacacaaaaatcaaaacaataga 3838866  T
Q  357 gacagcaagaaaaaagat 374  Q
    || || ||| ||||||||    
T  3838867 gagagaaagtaaaaagat 3838884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 9194424 - 9194351
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| | |||||||||||    
T  9194424 gagttgtgttatttgaacattcatatatgtaacaatttttgtgacaaccaaaattttacaaaagaaatgaggta 9194351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 9760201 - 9760128
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| |  |||||||||||||    
T  9760201 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttttccaaggaaatgaggta 9760128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 3097742 - 3097834
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || ||||||| |||| |||||||||    
T  3097742 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagttatttacacaaaaa 3097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 9207772 - 9207700
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||||||||||    
T  9207772 agttgtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttacaaaggaaatgaggta 9207700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 21611543 - 21611615
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggt 330  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| | ||||| ||||    
T  21611543 gagttgtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaatgaaataaggt 21611615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 25270463 - 25270555
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||| | || ||||||||||||| | || |||||||||||| |||||||||    
T  25270463 tatttaagagttgtgttatttgaacatccatttatatgacaactttcgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 25270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 27490618 - 27490714
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| ||| |   ||||||||||||||| || |||||||||||| || |||||| ||||||||||||||||| ||| ||||    
T  27490618 gagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaagcaata 27490714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 41042437 - 41042321
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||| |||||||||||||| |||||||||||||| |||| ||| ||||||||||||| | |||||||||| |||| ||| ||||| | ||| |||| ||    
T  41042437 gagttctgttatttgaacatccatatatgtgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaaccaaagcaatagag 41042338  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  41042337 agagaaagtaaaaagat 41042321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 41056636 - 41056720
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  41056636 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 41056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 9990874 - 9990805
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| ||  ||||||||||| |||||||||    
T  9990874 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaaggaaatga 9990805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 13333051 - 13333143
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| ||||||||||||||||||||  || ||| |||||||||||| || ||||||||||||| | || |||||| ||||| |||||||||    
T  13333051 tatttaagagttgtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaattttataaagaaaatgatgtattgacacaaaaa 13333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 19633466 - 19633392
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgt-gacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||| ||||||||||||| |||||||| || ||||||||||| || |||||||||||| |||||||||||||    
T  19633466 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggta 19633392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 19830367 - 19830293
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgt-gacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||| ||||||||||||| |||||||| || ||||||||||| || |||||||||||| |||||||||||||    
T  19830367 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggta 19830293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 7698355 - 7698258
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||| ||||||  ||| |||||| ||||||||||||||  ||||||||||| ||||||| ||||| |  |||||||||| ||| ||||    
T  7698355 tgagttgtgttattagaacatctatacatgtgataacttttgtgataattaaaattttacaaaggaaattaggtagtggcacaaaaatcaaagcaata 7698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 42091393 - 42091477
Alignment:
Q  261 ttgtgttatttgaacattcatat--atgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||  ||||  ||||||||| |||||||| ||||||||||||||| |||||| |||||| | |||||||||    
T  42091393 ttgtgttatttgaacatctatatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaa 42091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 28495049 - 28494958
Alignment:
Q  252 atttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| ||||||||||||||||||  ||| ||  | ||||||||||||| ||||| || ||||||||| |||| ||||||| |||||||||    
T  28495049 atttattagttgtgttatttgaacaaccatttaaattacaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaa 28494958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 19108993 - 19109077
Alignment:
Q  270 ttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||||||||||||||| ||| ||  |||| || ||||||||| ||| |  |||||||||| ||| ||||    
T  19108993 ttgaacattcatatatgtgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaatcaaagcaata 19109077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 7663955 - 7664039
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| |||| || ||||||| |||| ||| ||||| || |||||| || ||| |||||||| |||||||||    
T  7663955 gagttgtgttatttgaacaatcatttaggtgacaa-ttttatgacaaccataaatttacaaagaaaaagaggtattgacacaaaaa 7664039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 22416384 - 22416349
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||| |||||||||||||||    
T  22416384 gagttgtgttatttgaacatccatatatgtgacaac 22416349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 14255487 - 14255405
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacaca 339  Q
    |||| |||||||||||||||  ||| |||| ||||||||||| || ||||| || |||||| || |||  |||||||||||||    
T  14255487 tgaggtgtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaagtaggtattaacaca 14255405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 10060339 - 10060372
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaact 294  Q
    |||| |||||||||||||||||||||||||||||    
T  10060339 ttgtattatttgaacattcatatatgtgacaact 10060372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 29349688 - 29349595
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| |||||||| ||||| ||| ||  ||||||||||||||| || |||||||||||| || |||| | ||||   |||||||||| ||||||    
T  29349688 agttatgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaagaaaataatgtatcggcacaaaaatcaaagtaa 29349595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 19642777 - 19642685
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||| ||||| ||| ||| ||| |||||||| || ||||| |||||| || || |||||| | ||| ||||||||||| ||| ||||    
T  19642777 tgtgttatttaaacatccatttatatgagaacttttgagacaaccacaattttgcaaagaaaatgaagcattgacacaaaaatcaaagcaata 19642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 39147954 - 39147862
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    |||||||| |||||||||||||||  ||| |   |||||||||||| || || || || |||||| |  |||||||||||| |||||||||||    
T  39147954 tttatgagatgtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaatc 39147862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 53801646 - 53801732
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  53801646 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaa 53801732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 43175169 - 43175082
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||||||    
T  43175169 atgagttgtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaa 43175082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 11068868 - 11068755
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagaca 360  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||| | | ||||||||||| ||| |||| ||| |    
T  11068868 ttgtgttatttgaacattcatatatgtgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaatcaaagcaatagagaga 11068769  T
Q  361 gcaagaaaaaagat 374  Q
    | ||| ||||||||    
T  11068768 gaaagtaaaaagat 11068755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 29175408 - 29175323
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||| |||||||||    
T  29175408 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaa 29175323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 44539917 - 44539844
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  44539917 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 44539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 39440667 - 39440571
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||| | ||||||||||| ||| ||||    
T  39440667 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaatcaaagcaata 39440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 15175729 - 15175644
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||    
T  15175729 gagttgtattatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaa 15175644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 51986225 - 51986152
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  51986225 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 51986152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 37297231 - 37297116
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| | ||| |||| ||    
T  37297231 gagttgtgttatttgaacatccatatatttgacaacttttgtgacaaccaaaattttaca-aggaaatgaggtagtgacacaaaaaccaaagcaatagag 37297133  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  37297132 agagaaagtaaaaagat 37297116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 23369214 - 23369293
Alignment:
Q  252 atttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  23369214 atttaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggta 23369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 371
Target Start/End: Original strand, 31641440 - 31641566
Alignment:
Q  245 gtaatatatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaat 344  Q
    |||||| ||| | ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||| ||||| | ||||||||||    
T  31641440 gtaataaattaaagagttgtgttatttgaacattcatatacgtgataacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaat 31641539  T
Q  345 ctaagtaataaagacagcaagaaaaaa 371  Q
    | ||| |||  |||||| ||| |||||    
T  31641540 caaagcaatggagacagaaagtaaaaa 31641566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 26732408 - 26732335
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  26732408 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 26732335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 27050978 - 27051059
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||| |||| |||||||||    
T  27050978 tgtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaa 27051059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 38134528 - 38134451
Alignment:
Q  266 ttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | | |||||||||    
T  38134528 ttatttgaacattcatacatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaa 38134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 24575742 - 24575854
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagaca 360  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||||| | |||||||||||||||  |||||||| | ||| |||| ||| |    
T  24575742 ttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagcaatagagaga 24575841  T
Q  361 gcaagaaaaaaga 373  Q
    | ||| |||||||    
T  24575842 gaaagtaaaaaga 24575854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 39478620 - 39478524
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||  || ||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||| ||||||||    
T  39478620 gagttgtgtttattaaacatccatatatatgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagtaata 39478524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 26724860 - 26724945
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | ||| ||||||||||| ||||||||||||| | |||||||||    
T  26724860 gagttgtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaa 26724945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 38382511 - 38382419
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  38382511 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 38382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 47182031 - 47181939
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  47182031 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 47181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 48402078 - 48402170
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  48402078 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 48402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 46213155 - 46213080
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| | ||||||||||||||| |||||||||||||    
T  46213155 atgagttgtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggta 46213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 5622641 - 5622568
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||| ||  |||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  5622641 gagttgtgttatttgaagatctatatatgtcacaacttttgtgataactaaaattttacaaaggaaatgaggta 5622568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 10250406 - 10250519
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagaca 360  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| || |||||| ||| |  |||||||| | ||| |||| ||| |    
T  10250406 ttgtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaagcaatagagaga 10250505  T
Q  361 gcaagaaaaaagat 374  Q
    | ||| ||||||||    
T  10250506 gaaagtaaaaagat 10250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 36178089 - 36178016
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||| | |||||||||||||    
T  36178089 gagttgtgttatttgaacatttatatatgtgataacttttgtgacaactaaaattttataaaggaaatgaggta 36178016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 39606159 - 39606086
Alignment:
Q  254 ttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||| | |||||||||    
T  39606159 ttatgagttgtattatttgaacatttatatatgtgacaacttttacgataaccaaaattttataaaggaaatga 39606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 37997433 - 37997321
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacag 361  Q
    |||| |||||||||||  |||||||||| || |||||| | ||||||||||||||| || |||||||||||| ||||||||||| ||| |||| ||| ||    
T  37997433 tgtgctatttgaacatctatatatgtgataatttttgttacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagagag 37997334  T
Q  362 caagaaaaaagat 374  Q
     ||| ||||||||    
T  37997333 aaagtaaaaagat 37997321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 56363926 - 56364017
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaa 342  Q
    |||||| |||||||||||||||||||| ||| ||  |||||||||||| || ||||||||||||| | || |||||||||||| ||||||||    
T  56363926 tatttaagagttgtgttatttgaacatccatttacatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 27965168 - 27965085
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||  |  |||||||||||| | |||||||||    
T  27965168 gagttgtgttatttgaacatccatatatgtgacaacttctgtgacaaccaaaatttt--aatggaaatgaggtagtgacacaaaaa 27965085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 38376376 - 38376474
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||||||||  |||||||||| || |||||||| || |||||||||||| || ||||||| || |  |||||||||| ||||||||    
T  38376376 atgagttgtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaatcaaagtaata 38376474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 26492190 - 26492121
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    ||||||||||||||||||||  ||||||||||||| |||||||| || |||||||||||| |||||||||    
T  26492190 gagttgtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatga 26492121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 34616751 - 34616659
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| ||||||||||||||||||||  || ||| |||||||||||| || ||||||||||||| | || ||||||| |||| |||||||||    
T  34616751 tatttaagagttgtgttatttgaacatctatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacacaaaaa 34616659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 19473847 - 19473929
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||| || ||| ||| |||||||||||| || || |||||||||||| || |||||| ||||| |||||||||    
T  19473847 ttgtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttacaaagaaaatgaagtattgacacaaaaa 19473929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 46634282 - 46634187
Alignment:
Q  247 aatatatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatct 346  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||            ||||||||||| ||||||||||||| | |||||||||||     
T  46634282 aatataattttgagttgtgttatttgaacatccatatatgtgacaact------------aaaattttacaaaggaaatgaggtagtgacacaaaaatca 46634195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 42853760 - 42853675
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||| |  ||||||| ||||| || || |||||||||| | || |||||||||||| |||||||||    
T  42853760 gagttgtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 42853675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 42360328 - 42360292
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||||||||||||||||||||    
T  42360328 tgagttgtgttatttgaacattcatatatgtgacaac 42360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 53786102 - 53786142
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaactttt 297  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  53786102 tgagttgtgttatttgaacatccatatatgtgacaactttt 53786142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 2575678 - 2575748
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||||||||||  || ||| ||||||||||||||| ||| ||| ||||||| || |||||||    
T  2575678 gagttgtgttatttgaacatctatttatatgacaacttttgtgacaactaaagttttacaaagaaaatgag 2575748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 39195240 - 39195170
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||||||||||  || ||| ||||||| |||||||||| |||| ||||||| || |||||||    
T  39195240 gagttgtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttacaaagaaaatgag 39195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 45083149 - 45083056
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    |||||||||||||| ||||||||||||||||||| | | || |||||||||| | || |||||| ||| |  ||||||||| |||| ||||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaattttataaagaaaatgaagtaat-gcacaaaaatttaagcaataaaga 45083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 50608551 - 50608625
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaa 371  Q
    ||||| ||| ||||||||||| |||||||||| |||| ||||||||||| |||||||| ||| || ||| |||||    
T  50608551 tgtgacaactaaaattttacaaaggaaatgagatattgacacaaaaatcaaagtaatagagagaggaagtaaaaa 50608625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 297
Target Start/End: Original strand, 25123178 - 25123214
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaactttt 297  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25123178 ttgtgttatttgaacattcatatatgtaacaactttt 25123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 40348972 - 40348861
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||||||     |||||||||||||||| || |||||||||  | || ||||||| || | ||||||||| | ||| |||| ||    
T  40348972 gagttgtgttatttgaacattca-----gtgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaaccaaagcaatagag 40348878  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  40348877 agagaaagtaaaaagat 40348861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 49449036 - 49449092
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    ||||||||||| ||||||||| ||| |||||||||||  || |||||||||||||||    
T  49449036 ttgtgttatttaaacattcatttatatgacaacttttaagacaaccaaaattttaca 49449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 50831643 - 50831739
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||  ||| |   |||||||||||| || ||||| ||||||||| || ||| ||||| || ||||||||||| ||| ||||    
T  50831643 gagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaata 50831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 2268407 - 2268442
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||| |||||||||||||||    
T  2268407 gagttgtgttatttgaacatccatatatgtgacaac 2268442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 2268434 - 2268480
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||| ||||||||||||||| |||||||||| |||| |||||||||    
T  2268434 tgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaa 2268480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 29531533 - 29531579
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||| ||||||||||||||| ||||||||||||| | |||||||||    
T  29531533 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 29531579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 38510656 - 38510731
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggt 330  Q
    ||||||||||||||||||| ||||||  ||||| ||| || |||||||| || |||||||||| | ||||||| ||||    
T  38510656 tttatgagttgtgttatttcaacatt--tatatatgataatttttgtgacaatcaaaattttataaaggaaataaggt 38510731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 515533 - 515618
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| ||| || ||| ||||||||||||  |||| || || |||| | || ||||| |||||| |||||||||    
T  515533 gagttgtgttatttgaatatttatttatatgacaacttttgaaataatcataaatttataaagaaaatgtggtattgacacaaaaa 515618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 5233557 - 5233617
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    |||||||||||||||||||||  || ||||| ||||||||||  | || ||||||||||||    
T  5233557 tgagttgtgttatttgaacatctatttatgtaacaacttttgaaacaatcaaaattttaca 5233617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 10474000 - 10474096
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||| ||| ||||||||| |||| ||  | ||||||||| ||| ||||| || |||||| || ||| || ||||| ||||||||||| ||||||||    
T  10474000 gagttttgtaatttgaacactcatttagattacaacttttatgacaaccataaatttacaaagaaaaagaagtattgacacaaaaatcaaagtaata 10474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 41321443 - 41321342
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  41321443 tttatgagttgtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaaccaaagtaa 41321344  T
Q  353 ta 354  Q
    ||    
T  41321343 ta 41321342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 33037703 - 33037607
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||| ||| ||||    
T  33037703 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaata 33037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 7287075 - 7287162
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||||||    
T  7287075 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaa 7287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 1764406 - 1764292
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |  || ||||| | ||| ||||||||    
T  1764406 agttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaaccaaagcaataaaga 1764307  T
Q  359 cagcaagaaaaaaga 373  Q
     || ||| |||||||    
T  1764306 gagaaagtaaaaaga 1764292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 1671725 - 1671640
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||| | |||||||||    
T  1671725 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaa 1671640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 18258681 - 18258754
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  18258681 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 18258754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 26791127 - 26791248
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| || |  |||||||| | ||| ||    
T  26791127 tttaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaagcaa 26791226  T
Q  353 taaagacagcaagaaaaaagat 374  Q
    || ||| || ||| ||||||||    
T  26791227 tagagagagaaagtaaaaagat 26791248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 5168366 - 5168250
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| || |||||||||| |  |||||||||| ||| |||| ||    
T  5168366 gagttgtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaatcaaagcaatagag 5168267  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  5168266 agagaaagtaaaaagat 5168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 2972509 - 2972394
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| || |||||||| ||  ||||||||||||||| ||||||||||| ||| ||||     
T  2972509 atgacttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaatcaaagcaatag 2972410  T
Q  356 agacagcaagaaaaaa 371  Q
    ||| || ||| |||||    
T  2972409 agagagaaagtaaaaa 2972394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 28306019 - 28306093
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  28306019 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 28306093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 36739131 - 36739015
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| | ||||||||||| | ||||||||| | ||| |||| ||    
T  36739131 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaaccaaagcaatagag 36739032  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  36739031 agagaaagtaaaaagat 36739015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 13168704 - 13168609
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| |||||||||| || |  |||||||| | ||||||||    
T  13168704 agttgtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagtaata 13168609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 14923258 - 14923140
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||| | ||||||||||| |  |||||||| | ||| ||||     
T  14923258 atgagttgtgttatttgaacatcgatatatgtgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaaccaaagcaatag 14923159  T
Q  356 agacagcaagaaaaaagat 374  Q
    ||| || ||| ||||||||    
T  14923158 agagagaaagtaaaaagat 14923140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 35634723 - 35634789
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaa 324  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35634723 gagttgtgttatttgaacatccatatatgtgacaacttttatgataaccaaaattttacaaaggaaa 35634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 7076464 - 7076525
Alignment:
Q  266 ttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  7076464 ttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatga 7076525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 8687074 - 8686989
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||| ||||||||||||||||||||||||||||||||||| | | || |||||||||||| || |||||||||||| |||||||||    
T  8687074 gagtagtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttacaaagaaaatgaggtattgacacaaaaa 8686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 28467341 - 28467426
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||| | | |||||||||    
T  28467341 gagttgtgttatctgaacattcatatatgtgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaa 28467426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 17626176 - 17626084
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  17626176 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 17626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 1274545 - 1274427
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||| ||| |||||| |||| ||||||||| | ||| ||    
T  1274545 tttaagagttgtgttatttgaacatccatatatgtgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaaccaaagcaa 1274447  T
Q  353 taaagacagcaagaaaaaag 372  Q
    || ||| || ||| ||||||    
T  1274446 tagagagaggaagtaaaaag 1274427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 7552855 - 7552942
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||| |||||||||||| || || |||||| ||||| |||||||||||    
T  7552855 gagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatc 7552942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 14051203 - 14051276
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||||||||| || ||||||||||    
T  14051203 gagttgtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttacaaagaaaatgaggta 14051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 15479653 - 15479577
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| ||  ||||||||||| |  ||||||||||||    
T  15479653 tgagttgtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtatt 15479577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 22972300 - 22972215
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||| ||| | |||||||||| || ||| ||||||||||| || |||| ||||||||| |||||||    
T  22972300 gagttgtgttatttgaacatccatttatataacaacttttgagacaactaaaattttacaaagaaaataaggtattaatacaaaaa 22972215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 3565267 - 3565192
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    |||||||||||||||||||| ||  |  ||||||||||||| || ||||||||||||||| || ||||||||||||    
T  3565267 gagttgtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaagaaaatgaggtatt 3565192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 39054768 - 39054657
Alignment:
Q  260 gttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagac 359  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||| ||||||||| || || ||||||  ||||  |||||||||| ||| |||| |||     
T  39054768 gttgtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaagaaaatgatatatttgcacaaaaatcaaagcaatagagag 39054669  T
Q  360 agcaagaaaaaa 371  Q
    || ||| |||||    
T  39054668 agaaagtaaaaa 39054657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 13310063 - 13309981
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| ||| ||  |||||| ||||| || || |||| ||||||| || ||||||||||||||||||||||    
T  13310063 ttgtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaacacaaaaa 13309981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 18660941 - 18660826
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||| ||||| |||||||||||||||| | ||||||||| | || |||| ||||||| ||||||||| |||||  |||||||| | ||| |||| ||    
T  18660941 gagttgtattattcgaacattcatatatgtcataacttttgt-acaatcaaacttttacaaaggaaatgaagtattggcacaaaaaccaaagcaatagag 18660843  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  18660842 agagaaagtaaaaagat 18660826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 39591863 - 39591793
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||||||||||  || ||| ||||||| ||||||| ||||||| ||||||| || |||||||    
T  39591863 gagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgag 39591793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 39592255 - 39592185
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||||||||||  || ||| ||||||| ||||||| ||||||| ||||||| || |||||||    
T  39592255 gagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgag 39592185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 42175101 - 42175034
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatg 326  Q
    |||||||||||||||||||  ||||||||| |||||||| ||| |  |||||||||| | ||||||||    
T  42175101 agttgtgttatttgaacatcgatatatgtgtcaacttttatgacagtcaaaattttataaaggaaatg 42175034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 1079852 - 1079886
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaa 292  Q
    ||||||||||||||||||||||||| |||||||||    
T  1079852 gagttgtgttatttgaacattcataaatgtgacaa 1079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 21353298 - 21353242
Alignment:
Q  287 tgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||| || ||||| ||||||||| || ||| || |||||||||||||||    
T  21353298 tgacaacttttgggacaaccataattttacaaagaaaaagatgtattaacacaaaaa 21353242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 35646554 - 35646518
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaact 294  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  35646554 gagttgtgttatttaaacatccatatatgtgacaact 35646518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 49481 - 49393
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  49481 tatgagttatgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 49393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 38956504 - 38956622
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||| | ||| ||||     
T  38956504 atgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaacaaagcaatag 38956603  T
Q  356 agacagcaagaaaaaagat 374  Q
    ||| || ||| ||||||||    
T  38956604 agagagaaagtaaaaagat 38956622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 24614204 - 24614289
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| | |||||||||    
T  24614204 gagttgtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaa 24614289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 3937011 - 3937107
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| | |||||||||||||||  |||||||| | ||||||||    
T  3937011 gagttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagtaata 3937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 44895460 - 44895576
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||| | ||| |||| ||    
T  44895460 gagttatgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 44895559  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  44895560 agagaaagtaaaaagat 44895576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 25192805 - 25192890
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| || |||||||||| | |||||||||    
T  25192805 gagttgtgttatttgaatattcatacatgtgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaa 25192890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 41189429 - 41189516
Alignment:
Q  258 gagttgtgttatttgaacattcatatat--gtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||||||||||  |||| ||||||| ||| || |||||||||||| ||||||||||||||| |||||||||    
T  41189429 gagttgtgttatttgaacattcatatatatgtgataacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaa 41189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 46022148 - 46022240
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  46022148 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 46022240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 41989626 - 41989687
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  41989626 atgagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttaca 41989687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 7701734 - 7701642
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||| ||||| | || |||||||||||| |||||||||    
T  7701734 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaagttttataaagaaaatgaggtattgacacaaaaa 7701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 32529745 - 32529817
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||| ||| |||||||||||||| |||||||| || |||||||||||| |||||||||||||    
T  32529745 agttgtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggta 32529817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 374
Target Start/End: Original strand, 22918056 - 22918173
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    |||||||| |||||||| ||| |||| ||||||||||||||| || || |||||||||||| ||||||||||||| |  |||||||| | ||| |||| |    
T  22918056 tgagttgtattatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaataga 22918155  T
Q  357 gacagcaagaaaaaagat 374  Q
    || || ||| ||||||||    
T  22918156 gagagaaagtaaaaagat 22918173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 40112842 - 40112958
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||| ||||||| | ||| || |||||||||||| ||||||| ||||| |  |||||||| | ||| |||| ||    
T  40112842 gagttgtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaaccaaagcaatagag 40112941  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  40112942 agagaaagtaaaaagat 40112958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 43942815 - 43942743
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggt 330  Q
    |||||||||||||||||||| ||||||||||| || |||||||  ||||||||||||||| || |||||||||    
T  43942815 gagttgtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaagaaaatgaggt 43942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 43025523 - 43025453
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||| ||||||  |||||||||||||||||||| | ||| ||||||||||| ||||||||||    
T  43025523 gagttgtgttattcgaacatctatatatgtgacaacttttgtaacaactaaaattttacaaaggaaatgag 43025453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 40417961 - 40417872
Alignment:
Q  254 ttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||||||  || |||  ||||||||||| || ||||||||||||||| || || ||||||||| ||| |||||    
T  40417961 ttatgagttgtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttacaaagaaagtgaggtattgacataaaaa 40417872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 374
Target Start/End: Original strand, 44189196 - 44189314
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||| ||||||||||| | ||||||| ||||||| ||||||||||| || ||||| ||| || |||||||||| || | ||||||||| | ||||||||    
T  44189196 tatgacttgtgttatttca-cattcatgtatgtgataacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaaccaaagtaata 44189294  T
Q  355 aagacagcaagaaaaaagat 374  Q
     ||| || ||| ||||||||    
T  44189295 gagagagaaagtaaaaagat 44189314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 45851094 - 45851164
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    ||||||||||||||||||||| ||||| ||| |||| |||| ||| ||| ||||||||||| |||||||||    
T  45851094 tgagttgtgttatttgaacatccatatctgtcacaatttttttgacaactaaaattttacaaaggaaatga 45851164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 46578021 - 46578110
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    ||||||||| |||||||||||| ||||||||||| || || | ||| ||||||||||||| | | |||| ||||||||  ||||||||||    
T  46578021 atgagttgtcttatttgaacatccatatatgtgataatttctatgacaaccaaaattttataaaagaaacgaggtattggcacaaaaatc 46578110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 35072250 - 35072346
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||  | ||||||||||||| | || |||||||  ||| ||||||||||| ||| ||||    
T  35072250 gagttgtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaattttataaagaaaatgagacattgacacaaaaatcaaagcaata 35072346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 35098591 - 35098687
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||| || ||| ||| ||||||||||||  | ||||||||||||| | || |||||||  ||| ||||||||||| ||| ||||    
T  35098591 gagttgtgttatttgaatatccatttatatgacaacttttgaaacaaccaaaattttatatagaaaatgagacattgacacaaaaatcaaagcaata 35098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 47391214 - 47391313
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    |||||||||| |||||||||||||||||| | |||||||  || || ||| |||||| | |||||||||  |||| ||||||||||| ||  ||||||||    
T  47391214 agttgtgttagttgaacattcatatatgtaataacttttaagacaatcaatattttataaaggaaatgaaatattgacacaaaaatcaaaacaataaaga 47391313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 41018847 - 41018734
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||| |   || || |||||||||||| ||| || || || |||||| || ||| |||||||||||||||||| | |||||||| ||    
T  41018847 gagttgtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagtaatagag 41018748  T
Q  358 acagcaagaaaaaa 371  Q
    | || ||| |||||    
T  41018747 agagaaagtaaaaa 41018734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 3614334 - 3614393
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||  | |||||||||||||||    
T  3614334 gagttatgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttaca 3614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 38073391 - 38073356
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||| |||||||||||||||    
T  38073391 gagttgtgttatttgaacatccatatatgtgacaac 38073356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 38073364 - 38073318
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||| ||||||||||||||| |||||||||||||||  ||||||||    
T  38073364 tgtgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaa 38073318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 38944979 - 38944921
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    ||||||||||||| ||||||||| ||| |||||||||||  || || ||||||||||||    
T  38944979 agttgtgttatttaaacattcatttatatgacaacttttaagacaatcaaaattttaca 38944921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 43159461 - 43159547
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaa 342  Q
    |||||||||||||||||||||  ||| || |||||||||||  ||| ||||| || |||||| || ||| |||||||| | ||||||    
T  43159461 atgagttgtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgatacaaaa 43159547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 9428601 - 9428524
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    ||||||||||||||||||||||| || ||| ||| ||| |||  ||||| |||||||| | | || ||||||||||||    
T  9428601 atgagttgtgttatttgaacatttatttatatgataacattttagataatcaaaatttaataaagaaaatgaggtatt 9428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 48062240 - 48062155
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| | | |  |||| || ||||| || || |||||||||| | || |||||||||||| |||||||||    
T  48062240 gagttgtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaa 48062155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 32924169 - 32924267
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| | ||| ||||||    
T  32924169 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaataaa 32924267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 27541390 - 27541506
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||| | ||| |||| ||    
T  27541390 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 27541489  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  27541490 agagaaagtaaaaagat 27541506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 37503632 - 37503731
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| || |||||||||| |||| ||||||||||| ||| ||||    
T  37503632 tatgagttgtgttatttgaacatttatatatgtgataacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaatcaaagcaata 37503731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 42356972 - 42357057
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||| | |||||||||    
T  42356972 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 42357057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 42358529 - 42358622
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||||||| || ||||||||||||||| ||||||||||| ||| ||||    
T  42358529 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaatcaaagcaata 42358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 16969451 - 16969527
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  16969451 tatgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgaggta 16969527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 35597344 - 35597260
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| | |||||||||    
T  35597344 agttgtgttatttgaatattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaa 35597260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 44413283 - 44413399
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||||||  |||||||||||||||||||||| ||  ||||||||||| |||||||||||||||  |||||||| | ||| |||||||    
T  44413283 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaaccgaagcaataaag 44413382  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  44413383 agagaaagtaaaaagat 44413399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 52939834 - 52939718
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||||| |  |||||||| | ||| |||| ||    
T  52939834 gagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 52939735  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  52939734 agagaaagtaaaaagat 52939718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 13735915 - 13735840
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  13735915 atgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaaggaaatgaggta 13735840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 44856136 - 44856022
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||||||| ||||||||||||| |  |||||||||| ||| |||| ||    
T  44856136 gagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagaaatagag 44856037  T
Q  358 acagcaagaaaaaag 372  Q
    | || ||| ||||||    
T  44856036 agagaaagtaaaaag 44856022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 38926811 - 38926695
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||| ||||||| ||||| | ||||||||| | ||| |||| ||    
T  38926811 gagttgtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaaccaaagcaatagag 38926712  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  38926711 agagaaagtaaaaagat 38926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 41309300 - 41309184
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| |||||||| || ||||||||||| || |||||||||||| || |||||||||| | ||||||||||| ||| |||| ||    
T  41309300 gagttgtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagag 41309201  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  41309200 agagaaagtaaaaagat 41309184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 5244414 - 5244339
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  5244414 atgaggtgtgttatttgaacatttatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggta 5244339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 52254026 - 52254141
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||||||| ||||||||||||| | ||||||||| | ||| |||| ||    
T  52254026 gagttgtgtcatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagag 52254125  T
Q  358 acagcaagaaaaaaga 373  Q
    | || ||| |||||||    
T  52254126 agagaaagtaaaaaga 52254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 19149175 - 19149057
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    |||||||||||||||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||| || |  |||||||| | ||  |||||    
T  19149175 atgagttgtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaaccaaaacaataa 19149076  T
Q  356 agacagcaagaaaaaagat 374  Q
    ||| || ||| ||||||||    
T  19149075 agagagaaagtaaaaagat 19149057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 36670901 - 36670975
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  36670901 tgagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaatgaaatgaggta 36670975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 33939421 - 33939336
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | || ||||||||| ||| | |||||||||    
T  33939421 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaa 33939336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 47472512 - 47472439
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  47472512 gagttatgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 47472439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 55151605 - 55151690
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||  ||||||||||| ||||||||| ||||| |||||||||    
T  55151605 gagttgtgttatttgaacatttatatatgtgacaacttttgttacaattaaaattttacaaaggaaatgaagtattgacacaaaaa 55151690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 21217702 - 21217610
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  21217702 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 21217610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 37056938 - 37057030
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || |||||| |||||||| || |||||||||||| |||||||||    
T  37056938 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttacaaagaaaatgaggtattgacacaaaaa 37057030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 24256660 - 24256759
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    |||||||||||||||| ||  |||||||||||||||||||||| ||  ||||||||||| ||||||||||||||| | ||||||||| ||  ||||||||    
T  24256660 agttgtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaatcaaaacaataaaga 24256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 20547901 - 20547994
Alignment:
Q  281 tatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||||| ||| |||| ||| || ||| ||||||||    
T  20547901 tatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagat 20547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 26014995 - 26014922
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||| |||||  ||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  26014995 gagttgtgttatttaaacatctatacatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 26014922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 35376969 - 35377082
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||| ||||||||||||||| || |||||| |||||  |||||||||| ||| |||| ||    
T  35376969 gagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaagcaatagag 35377068  T
Q  358 acagcaagaaaaaa 371  Q
    | || ||| |||||    
T  35377069 aaagaaagtaaaaa 35377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 344
Target Start/End: Complemental strand, 44383379 - 44383286
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaat 344  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || || |||||||||| | || |||||||||||| ||||||||||    
T  44383379 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaat 44383286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 46624090 - 46624005
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| |||| |||||| ||||||||||| || |||||||||||| || |||||||||| | |||||||||    
T  46624090 gagttgtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaa 46624005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 52326202 - 52326129
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||| || |||||||||||| |||||||||||||    
T  52326202 gagttgtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttacaaaggaaatgaggta 52326129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 5114261 - 5114145
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||||||  || |||||||||| |||| ||| || |||||||||||| || |||||||||| | ||||||||||| ||| |||| ||    
T  5114261 gagttgtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagag 5114162  T
Q  358 acagcaagaaaaaagat 374  Q
    | || ||| ||||||||    
T  5114161 agagaaagtaaaaagat 5114145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 23592640 - 23592556
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  23592640 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 23592556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 7934158 - 7934087
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||| |||| |||||    
T  7934158 tgagttgtgttatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggatatgag 7934087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 8847289 - 8847208
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |  ||||||||||||  ||||||||    
T  8847289 ttgtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaataaaatgaggtattggcacaaaaa 8847208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 37302729 - 37302615
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||| |||||||||||| |||| || ||||||||||||||| || ||||||||| || ||||||||||||| |  |||||||| | |||||||| ||    
T  37302729 gagttgtcttatttgaacatccatacatttgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaaccaaagtaatagag 37302630  T
Q  358 acagcaagaaaaaag 372  Q
    | || ||| ||||||    
T  37302629 agagaaagtaaaaag 37302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 13348022 - 13348107
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| || ||||||||||||||| || |||||||||||| | |||||||    
T  13348022 gagttatgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaa 13348107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 31157565 - 31157640
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtatt 333  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||  | |||||||||||| ||||||| |||||||    
T  31157565 gagttgtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttacaaaggaaattaggtatt 31157640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 343
Target Start/End: Complemental strand, 288910 - 288824
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||| || |||||||||||||||| |||| | || |||||||||||| | |||||||| || | |||||||||    
T  288910 tgagttgtgttatttgaaaatccatatatgtgacaactattgtaacaatcaaaattttacaaaagaaatgagatagtgacacaaaaa 288824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 7668079 - 7668132
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatttt 314  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  7668079 ttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaatttt 7668132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 44813319 - 44813246
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    ||||||||| ||||||||||  |||||||||||||||||||||  || |||||||||||| ||||||| |||||    
T  44813319 gagttgtgtgatttgaacatctatatatgtgacaacttttgtggcaatcaaaattttacaaaggaaattaggta 44813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 44445477 - 44445390
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    ||||| ||||||||||||||  |||||||| ||||||||| ||| ||||||||||||| | || ||||||| ||||  ||||||||||    
T  44445477 gagttatgttatttgaacatcgatatatgtaacaacttttatgacaaccaaaattttataaagaaaatgagatatttgcacaaaaatc 44445390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 23600775 - 23600702
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtat 332  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||| ||||    
T  23600775 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgangtat 23600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 25641471 - 25641556
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||| |||||||||||| ||| ||| |||||||||||| || ||||||| ||||||| || |||| |||||||  ||||||||    
T  25641471 gagttgtattatttgaacatccatttatatgacaacttttgagacaaccaaagttttacatagaaaataaggtattggcacaaaaa 25641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 28539629 - 28539697
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatga 327  Q
    ||||||||||||||||||| ||| ||  ||| |||||||||||||||||||||||| || || ||||||    
T  28539629 agttgtgttatttgaacatccatttagatgataacttttgtgataaccaaaattttgcaaagaaaatga 28539697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 41505635 - 41505558
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    ||||| ||||||||||||||| ||||||||||||| | ||||||||| | ||| |||| ||| || ||| ||||||||    
T  41505635 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagat 41505558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 42889168 - 42889083
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||| |||||  || ||  ||||||||||||  ||||||||||||||||| || ||||||| ||||  ||||||||    
T  42889168 gagttgtgttatttaaacatctatttagatgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaa 42889083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 11630642 - 11630734
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| ||| |||||| ||||| || ||  ||||||||||| || |||||| ||||| | | ||||| | ||||||||    
T  11630642 tgtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaagaaaatgaagtattgatataaaaaccaaagtaata 11630734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 16129677 - 16129589
Alignment:
Q  286 gtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||   || ||||||| ||  || |||||||| ||| ||||||||    
T  16129677 gtgacaacttttcgtataaccaaaattttacagaggaaatgaggtatcggcataaaaatcaaaacaacaaagacagaaaggaaaaagat 16129589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 41505663 - 41505627
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaac 293  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41505663 tgagttgtgttatttgaacatccatatatgtgacaac 41505627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 44463538 - 44463446
Alignment:
Q  260 gttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    ||||||||||||||||||  |  ||| ||| |||||||| ||||| |||||||||||| || ||||| | |||| | ||||||||| ||||||    
T  44463538 gttgtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttacaaagaaaatgtgatattgatacaaaaatcaaagtaa 44463446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 9719331 - 9719394
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttac 316  Q
    ||||||||||||||||||||||||  ||| |   |||||||||||| |||||||| ||||||||    
T  9719331 tttatgagttgtgttatttgaacaaccatttgattgacaacttttgggataaccataattttac 9719394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 39629729 - 39629783
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatttta 315  Q
    |||||||||||||||| |||  |||||||||||||||   |||||||||||||||    
T  39629729 ttgtgttatttgaacaatcaattatgtgacaacttttagtataaccaaaatttta 39629783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 45711355 - 45711409
Alignment:
Q  286 gtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaa 340  Q
    |||||||||||||| | ||||||||||||||| || |||||| ||||| ||||||    
T  45711355 gtgacaacttttgtaacaaccaaaattttacaaagaaaatgaagtattgacacaa 45711409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 14226593 - 14226678
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| |||  ||||| |||| ||||  || || |||||||||||| || ||||||  |||| |||||||||    
T  14226593 gagttgtgttatttgaacaatcaattatgtaacaatttttaagacaatcaaaattttacaaagaaaatgaaatattgacacaaaaa 14226678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 42478142 - 42478086
Alignment:
Q  258 gagttgtgttatttgaacattc--atatatgtgacaacttttgtgataaccaaaatt 312  Q
    |||||||||||||||||||| |  |||||| ||| ||||||||||| ||||||||||    
T  42478142 gagttgtgttatttgaacatccatatatatatgataacttttgtgacaaccaaaatt 42478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 51982282 - 51982197
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||| || ||| ||| | |||| ||||| || ||| ||||||||| | || |||| ||||||| |||||||||    
T  51982282 gagttgtgttatttgaaaatccatttatataacaatttttgagacaactaaaattttataaagaaaataaggtattgacacaaaaa 51982197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 12762581 - 12762677
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    ||||||||||||||| |||| ||  |||||| || || || ||||| || |||||| || |||  || |||| ||||||||||| ||||||||||||    
T  12762581 tgtgttatttgaacaatcatttacatgacaatttatgggacaaccataaatttacaaagaaaaatagttattgacacaaaaatcaaagtaataaaga 12762677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 35201323 - 35201407
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| ||| ||  |||||||||||| || ||  |||||| |||| || |||| || |||| |||||||||    
T  35201323 agttgtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatacaaagaaaataagatattgacacaaaaa 35201407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 42997469 - 42997389
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaaca 337  Q
    |||| |||||||||| ||||||||| ||| |||||||||||  || |||||||||| || | || |||| || ||||||||    
T  42997469 tgagctgtgttatttaaacattcatttatatgacaacttttaagacaaccaaaattgtataaagaaaataagatattaaca 42997389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 374
Target Start/End: Complemental strand, 552977 - 552860
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||| | ||| |||| |    
T  552977 tgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaataga 552878  T
Q  357 gacagcaagaaaaaagat 374  Q
    || || ||| ||||||||    
T  552877 gagagaaagtaaaaagat 552860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 33430250 - 33430335
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||    
T  33430250 gagttgtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 15974791 - 15974706
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||    
T  15974791 gagttgtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaa 15974706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 32316816 - 32316901
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||||||    
T  32316816 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaa 32316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 5694038 - 5694126
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatc 345  Q
    ||||||||||||||| ||||||||| |||||||||||||||| || |||| |||||||||| ||||||||||||||| |||||||||||    
T  5694038 tgagttgtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaatc 5694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 31077979 - 31077892
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||| | |||||||||    
T  31077979 atgagttgtgttatttgaatattcatacatgtgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaa 31077892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 255 - 373
Target Start/End: Complemental strand, 14818118 - 14818000
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| | ||||||||||||| |  |||||||| | ||  ||||    
T  14818118 tatgagttgtgttatttgaacatttatatatatgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaaccaaaacaata 14818019  T
Q  355 aagacagcaagaaaaaaga 373  Q
    |||| || ||| |||||||    
T  14818018 aagagagaaagtaaaaaga 14818000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 18737460 - 18737571
Alignment:
Q  263 gtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagc 362  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| || ||||||||||||  |||||||| | ||  |||||||| ||     
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaaccaaaacaataaagagaga 18737559  T
Q  363 aagaaaaaagat 374  Q
    ||| ||||||||    
T  18737560 aagtaaaaagat 18737571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 13689882 - 13689978
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| |||||||||||||| ||||  || ||| ||||||||| | ||||||||||||||| ||||||||||| ||| ||||    
T  13689882 gagttgtgttatttgaacatccatatatgtgacaatttttacgacaactaaaattttataaaggaaatgaggtattgacacaaaaatcaaagcaata 13689978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 16199640 - 16199548
Alignment:
Q  251 tatttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||| |||||||||||||||||||| ||| ||| |||||||||||| || ||||||||||||| | || |||||||||||| |||||||||    
T  16199640 tatttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 16199548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 11612370 - 11612255
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    |||||||||||||||| ||| |||||||||| || ||||||||||| |||||||||||| || ||||||||||||  |||||||||  ||| |||| |||    
T  11612370 agttgtgttatttgaatatttatatatgtgataatttttgtgataatcaaaattttacaaagaaaatgaggtatttgcacaaaaattaaagcaatagaga 11612271  T
Q  359 cagcaagaaaaaagat 374  Q
     || ||| ||||||||    
T  11612270 aagaaagtaaaaagat 11612255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 26595532 - 26595447
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||| ||| ||||||||||||  | ||||||||||||||| || |||||||||||| |||||||||    
T  26595532 gagttgtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaa 26595447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 22079449 - 22079564
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataa 355  Q
    |||||||||||||||||||||| ||| ||  |||| |||||||||| |||||||||||| || || |||||| ||||| ||||||||||| ||| ||||     
T  22079449 atgagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaagcaatag 22079548  T
Q  356 agacagcaagaaaaaa 371  Q
    ||| || ||| |||||    
T  22079549 agagagaaagtaaaaa 22079564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 30457688 - 30457603
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||| || ||||| ||| ||| |||||||||||| |||||||||||||| ||| || |||||||||||| |||||||||    
T  30457688 gagttgtgttaattcaacatccatttatatgacaacttttgagataaccaaaatttcacatagaaaatgaggtattgacacaaaaa 30457603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 34047570 - 34047485
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || ||| ||| ||||  ||||||||    
T  34047570 gagttttgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaa 34047485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 33603168 - 33603266
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    |||||||||| ||||||||| ||| ||| |||||||||||  |||   |||||||||||| || |||||||||||| ||||||||||| ||| ||||||    
T  33603168 gagttgtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaataaa 33603266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 1156903 - 1156790
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| || |||||||||  | |||||||||| || |  |||||||| | |||||||| ||    
T  1156903 gagttgtgttatttgaacatccatatatttgataacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaaccaaagtaatagag 1156804  T
Q  358 acagcaagaaaaaa 371  Q
    | || ||| |||||    
T  1156803 agagaaagtaaaaa 1156790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 277174 - 277078
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||| ||||||| | ||  |||||| |||||||| ||||||||||||||| || ||||||  |||| ||||||||||| ||| ||||    
T  277174 gagttgtgttatttaaacattcctttagatgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 277078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 3853206 - 3853291
Alignment:
Q  269 tttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||| ||| |||||||||||| || ||| || |||||||| || ||||||| |||| ||||||||||| ||| ||||    
T  3853206 tttgaacattcatttatatgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaatcaaagcaata 3853291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 8098497 - 8098532
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    ||||||||||||||||||||||||||||||||||||    
T  8098497 gagttgtgttatttgaacattcatatatgtgacaac 8098532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 5080494 - 5080540
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||    
T  5080494 tgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 5080540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 4820555 - 4820454
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| |||||||||||||||||||   || ||  ||| |||||||| || || |||||||||||| || |||||||| ||| ||||||||||| ||| ||    
T  4820555 tttaagagttgtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaatcaaagcaa 4820456  T
Q  353 ta 354  Q
    ||    
T  4820455 ta 4820454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 17551262 - 17551351
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||||||||  || | | ||||| | ||||||| |||||||| |||| | || |||||||| ||| |||||||||    
T  17551262 tttatgagttgtgttatttgaacatctatttttatgacagcatttgtgacaaccaaaa-tttataaagaaaatgagggattgacacaaaaa 17551351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 37449313 - 37449429
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaag 357  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||| | ||| |||| ||    
T  37449313 gagttgtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaaccaaagcaatagag 37449412  T
Q  358 acagcaagaaaaaagat 374  Q
    |||| ||| ||||||||    
T  37449413 acagaaagtaaaaagat 37449429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 255 - 374
Target Start/End: Original strand, 4054171 - 4054290
Alignment:
Q  255 tatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||| | ||||||||||| | ||||||||| | ||| ||||    
T  4054171 tatgagttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaaccaaagcaata 4054270  T
Q  355 aagacagcaagaaaaaagat 374  Q
    |||| || ||| ||||||||    
T  4054271 aagagagaaagtaaaaagat 4054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 374
Target Start/End: Complemental strand, 22719624 - 22719507
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaa 356  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||| |  |||||||| | ||| |||| |    
T  22719624 tgagttgtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaaccaaagcaataga 22719525  T
Q  357 gacagcaagaaaaaagat 374  Q
    || || ||| ||||||||    
T  22719524 gagagaaagtaaaaagat 22719507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 27325946 - 27325825
Alignment:
Q  253 tttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaa 352  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |  |||||||| | ||| ||    
T  27325946 tttaagagttgtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaa 27325847  T
Q  353 taaagacagcaagaaaaaagat 374  Q
    || ||| || ||| ||||||||    
T  27325846 tagagagagaaagtaaaaagat 27325825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 32501087 - 32501180
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| ||||||||||||| | ||||||||||| ||||||||    
T  32501087 ttgtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaata 32501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 36816507 - 36816600
Alignment:
Q  261 ttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||||| || || |||||| ||||||||||||||||| ||| ||||    
T  36816507 ttgtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaagaaaatgacgtattaacacaaaaatcaaagcaata 36816600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 34186790 - 34186694
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||||||||| |||| |||||||||||||||||| || ||||||||| || ||||||||||||| | ||||||||| | ||||||||    
T  34186790 gagttgtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagtaata 34186694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 12898817 - 12898887
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgag 328  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  12898817 gagttatgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 12898887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 24479406 - 24479323
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaa 341  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||| ||| ||||||||||| |||||||||| |||| |||||||    
T  24479406 gagttgtgttatttgagcattcatatatatgataacttttgtgacaactaaaattttacaaaggaaatgagatattgacacaaa 24479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 343
Target Start/End: Complemental strand, 42768388 - 42768302
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| ||| ||||||||||| ||||||||||| | | |||||||||    
T  42768388 tgagttgtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaa 42768302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 29025443 - 29025358
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||| ||||| ||| ||| |||||||||||| || ||||||||||||||| || |||||||||||| |||||||||    
T  29025443 gagttgtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaa 29025358  T

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Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 374
Target Start/End: Original strand, 5277393 - 5277503
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagca 363  Q
    |||||||||||||| |||| ||||||||| || ||||| || |||||||||||| ||||||||||||| | |||||||||  |||| |||| ||| || |    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaacttaagcaatagagagagaa 5277492  T
Q  364 agaaaaaagat 374  Q
    || ||||||||    
T  5277493 agtaaaaagat 5277503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 36251503 - 36251425
Alignment:
Q  264 tgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaa 342  Q
    |||||||||||||| ||||||||||| |||||| |||| || |||||||||||| ||||||||||||| | ||||||||    
T  36251503 tgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaa 36251425  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 7272037 - 7271948
Alignment:
Q  254 ttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||| || ||||||||| || | |||||||| || | |||||||||    
T  7272037 ttatgagttgtgttatatgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaa 7271948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 11253430 - 11253515
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||| ||||||||||||  ||| || |||||||||||||||  |||||||||||||| || |||||||||||| |||||||||    
T  11253430 gagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaa 11253515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 37133750 - 37133846
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    |||||||||||||| ||||| ||| ||  ||||||||||||||| ||||||||||||||| || ||||||  |||| ||||||||||| ||| ||||    
T  37133750 gagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 37133846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 36660339 - 36660454
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaaga 358  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| || |||||||||| | || |||||| ||||| |||||| || | ||| |||| |||    
T  36660339 agttgtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaattttataaagaaaatgaagtattgacacaataaccaaagcaatagaga 36660438  T
Q  359 cagcaagaaaaaagat 374  Q
     || ||| ||||||||    
T  36660439 gagaaagtaaaaagat 36660454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 43397960 - 43397868
Alignment:
Q  262 tgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaata 354  Q
    ||||||| |||||||| |||| |||||||| ||||||||| ||||||||||||||| || ||||||| || |  |||||||| | ||||||||    
T  43397960 tgtgttaattgaacatccatacatgtgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagtaata 43397868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 32133505 - 32133425
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacaca 339  Q
    ||||||||||||||||||| ||| ||| ||| || ||||| |||||||||||||||||| |  |||| ||||||| |||||    
T  32133505 agttgtgttatttgaacatccatttatatgataaattttgagataaccaaaattttacaaataaaataaggtattgacaca 32133425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 7598897 - 7598807
Alignment:
Q  252 atttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||| ||||||||||||||||||||||||  ||| ||| |||||||| || |||||||| |||||| || |||| ||||||| ||| |||||    
T  7598897 atttttgagttgtgttatttgaacattcaattatatgaaaacttttgagacaaccaaaa-tttacatagaaaataaggtattgacataaaaa 7598807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 23754593 - 23754679
Alignment:
Q  257 tgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||||  | ||| ||||||| ||||  | ||||||||||||||| || |||||||  ||| |||||||||    
T  23754593 tgagttgtgttatttgaacattattttatatgacaacctttgcaacaaccaaaattttacaaagaaaatgagtgattgacacaaaaa 23754679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 10731690 - 10731613
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    ||||| || |||||||||||| ||||||||| ||||| ||||||||||| ||| |||| ||| || ||| ||||||||    
T  10731690 tgtgacaatcaaaattttacaaaggaaatgaagtattgacacaaaaatcaaagcaatagagagagaaagtaaaaagat 10731613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 13106663 - 13106578
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||  ||| || |||||||||||| | | ||||| || |||||| || ||| |||||||| |||||||||    
T  13106663 gagttgtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaa 13106578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 10692614 - 10692555
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttaca 317  Q
    ||||||| |||||||||||| |||||||||| |||||| | ||| || ||||||||||||    
T  10692614 gagttgtattatttgaacatccatatatgtgtcaacttctctgacaatcaaaattttaca 10692555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 31249424 - 31249459
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaac 293  Q
    |||||||||||||||||||| |||||||||||||||    
T  31249424 gagttgtgttatttgaacatccatatatgtgacaac 31249459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 10731717 - 10731683
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaa 292  Q
    ||||||||||||||||||||| |||||||||||||    
T  10731717 gagttgtgttatttgaacattgatatatgtgacaa 10731683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 10963663 - 10963700
Alignment:
Q  259 agttgtgttatttgaacattcatatatgtgacaacttt 296  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  10963663 agttgtgttatttgaacattaatatatgcgacaacttt 10963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 8851 - 8766
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||| | |||||||||    
T  8851 gagttgtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaa 8766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 76507 - 76580
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggta 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  76507 gagttgtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 76580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 11965 - 11880
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||| ||||||||||||  ||| || |||||||||||||||  |||||||||||||| || |||||||||||| |||||||||    
T  11965 gagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaa 11880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 53247 - 53334
Alignment:
Q  256 atgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaa 343  Q
    ||||||||||||||||||||||| || ||| ||| || ||||  || |||||||| |||| | || ||||||| |||| |||||||||    
T  53247 atgagttgtgttatttgaacatttatttatatgataagtttttagacaaccaaaaatttataaagaaaatgagatattgacacaaaaa 53334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 10890 - 10967
Alignment:
Q  297 tgtgataaccaaaattttacacaggaaatgaggtattaacacaaaaatctaagtaataaagacagcaagaaaaaagat 374  Q
    ||||| || |||||||||| | || |||||||||| ||||||||||||| || ||||| ||| || ||| ||||||||    
T  10890 tgtgacaatcaaaattttataaagaaaatgaggtagtaacacaaaaatcaaaataatagagagagaaagtaaaaagat 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 20789 - 20845
Alignment:
Q  258 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaatttt 314  Q
    |||||||||||||||||||| ||| ||  ||| || ||||||||||| |||||||||    
T  20789 gagttgtgttatttgaacatccatttaaatgataatttttgtgataatcaaaatttt 20845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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