View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7335_low_1 (Length: 613)

Name: NF7335_low_1
Description: NF7335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7335_low_1
NF7335_low_1
[»] chr4 (39 HSPs)
chr4 (469-605)||(22174263-22174399)
chr4 (16-117)||(25091540-25091641)
chr4 (11-117)||(11425825-11425931)
chr4 (16-117)||(10356500-10356601)
chr4 (16-117)||(53630538-53630639)
chr4 (16-117)||(16998412-16998513)
chr4 (16-117)||(42875684-42875785)
chr4 (16-117)||(15115109-15115210)
chr4 (20-117)||(37019561-37019658)
chr4 (478-607)||(17409-17538)
chr4 (16-117)||(19610211-19610312)
chr4 (16-117)||(6633601-6633701)
chr4 (16-117)||(46001595-46001695)
chr4 (483-597)||(14926284-14926399)
chr4 (28-94)||(26921708-26921774)
chr4 (478-605)||(16719379-16719501)
chr4 (480-601)||(27342262-27342380)
chr4 (502-605)||(25985899-25986002)
chr4 (321-361)||(22174495-22174535)
chr4 (61-115)||(9924085-9924139)
chr4 (321-362)||(7945273-7945314)
chr4 (534-601)||(7945466-7945533)
chr4 (64-112)||(14549695-14549743)
chr4 (487-602)||(15579151-15579258)
chr4 (550-601)||(15878603-15878654)
chr4 (59-113)||(9870513-9870568)
chr4 (547-601)||(13101643-13101697)
chr4 (547-601)||(16361606-16361660)
chr4 (321-362)||(17249-17290)
chr4 (321-362)||(3440726-3440766)
chr4 (568-601)||(44623327-44623360)
chr4 (487-602)||(15566505-15566612)
chr4 (26-91)||(27028642-27028708)
chr4 (59-92)||(9638939-9638972)
chr4 (329-362)||(15566708-15566741)
chr4 (329-362)||(15579354-15579387)
chr4 (568-597)||(18216994-18217023)
chr4 (516-581)||(23995281-23995346)
chr4 (63-115)||(11478720-11478772)
[»] scaffold0019 (6 HSPs)
scaffold0019 (469-605)||(12777-12913)
scaffold0019 (469-598)||(22472-22601)
scaffold0019 (119-231)||(23615-23727)
scaffold0019 (248-367)||(13014-13134)
scaffold0019 (248-367)||(22701-22818)
scaffold0019 (77-117)||(24195-24235)
[»] scaffold0241 (2 HSPs)
scaffold0241 (16-118)||(3069-3171)
scaffold0241 (16-117)||(2451-2552)
[»] chr3 (65 HSPs)
chr3 (7-117)||(49900608-49900718)
chr3 (16-117)||(17518937-17519038)
chr3 (16-117)||(17533799-17533900)
chr3 (16-117)||(40807883-40807984)
chr3 (16-117)||(40812720-40812821)
chr3 (16-117)||(50348090-50348191)
chr3 (16-117)||(17044853-17044954)
chr3 (16-117)||(17538993-17539094)
chr3 (18-117)||(41172435-41172534)
chr3 (16-117)||(17047013-17047114)
chr3 (28-117)||(22306647-22306736)
chr3 (16-117)||(44274305-44274406)
chr3 (16-117)||(10311415-10311515)
chr3 (16-117)||(10563596-10563696)
chr3 (16-117)||(11259318-11259419)
chr3 (16-117)||(17693954-17694055)
chr3 (16-117)||(35354489-35354590)
chr3 (16-117)||(15931571-15931672)
chr3 (16-80)||(35064681-35064745)
chr3 (16-74)||(5200277-5200335)
chr3 (122-179)||(4434096-4434153)
chr3 (122-179)||(4454891-4454948)
chr3 (119-196)||(30068232-30068309)
chr3 (119-179)||(18887794-18887854)
chr3 (480-601)||(30063383-30063501)
chr3 (523-601)||(18890911-18890990)
chr3 (523-601)||(18901094-18901173)
chr3 (32-117)||(14508749-14508835)
chr3 (21-115)||(19568274-19568368)
chr3 (64-117)||(35064605-35064658)
chr3 (480-597)||(4435110-4435224)
chr3 (480-597)||(4455901-4456015)
chr3 (119-179)||(18892021-18892081)
chr3 (119-179)||(18902204-18902264)
chr3 (523-597)||(18886673-18886748)
chr3 (59-115)||(11563654-11563710)
chr3 (21-112)||(9510985-9511076)
chr3 (21-112)||(9518960-9519051)
chr3 (122-196)||(40999552-40999626)
chr3 (122-196)||(41008335-41008409)
chr3 (59-117)||(42324036-42324094)
chr3 (122-196)||(27552461-27552535)
chr3 (61-115)||(33565018-33565072)
chr3 (478-577)||(49965872-49965968)
chr3 (59-115)||(49968925-49968981)
chr3 (547-601)||(8805116-8805170)
chr3 (547-601)||(8813516-8813570)
chr3 (547-601)||(15628562-15628616)
chr3 (547-601)||(19834727-19834781)
chr3 (59-117)||(37038978-37039037)
chr3 (69-115)||(13185834-13185880)
chr3 (523-605)||(16015095-16015177)
chr3 (61-115)||(35960995-35961049)
chr3 (547-598)||(15621201-15621252)
chr3 (547-601)||(5650402-5650456)
chr3 (547-605)||(15577928-15577986)
chr3 (547-605)||(15608995-15609053)
chr3 (323-362)||(15910413-15910452)
chr3 (547-605)||(15910690-15910748)
chr3 (323-362)||(15924656-15924695)
chr3 (547-605)||(15924933-15924991)
chr3 (59-115)||(45530668-45530725)
chr3 (330-362)||(5650591-5650623)
chr3 (330-362)||(19834560-19834592)
chr3 (59-106)||(22146832-22146880)
[»] scaffold1941 (1 HSPs)
scaffold1941 (16-117)||(25-126)
[»] chr8 (33 HSPs)
chr8 (16-117)||(5082276-5082377)
chr8 (16-117)||(5761421-5761522)
chr8 (7-117)||(20083702-20083812)
chr8 (16-117)||(6573120-6573221)
chr8 (23-115)||(19140659-19140751)
chr8 (470-605)||(27807104-27807239)
chr8 (16-117)||(42817971-42818072)
chr8 (16-116)||(39936075-39936175)
chr8 (7-117)||(20178593-20178704)
chr8 (16-117)||(6101817-6101918)
chr8 (16-117)||(6202664-6202764)
chr8 (16-117)||(37292593-37292693)
chr8 (119-196)||(17974051-17974128)
chr8 (119-196)||(20725670-20725747)
chr8 (518-607)||(20734538-20734627)
chr8 (119-196)||(20738568-20738645)
chr8 (119-205)||(20746857-20746943)
chr8 (119-176)||(20733611-20733668)
chr8 (27-92)||(20397590-20397656)
chr8 (475-605)||(21473959-21474092)
chr8 (13-115)||(31722560-31722661)
chr8 (21-115)||(39694343-39694437)
chr8 (518-577)||(20726643-20726702)
chr8 (518-577)||(20739541-20739600)
chr8 (21-112)||(22532201-22532292)
chr8 (21-112)||(22536886-22536977)
chr8 (59-111)||(22317981-22318033)
chr8 (59-115)||(42265575-42265631)
chr8 (59-115)||(45469286-45469342)
chr8 (551-597)||(23640984-23641031)
chr8 (547-601)||(24484148-24484202)
chr8 (59-115)||(3273819-3273876)
chr8 (59-92)||(20022122-20022155)
[»] chr7 (47 HSPs)
chr7 (16-117)||(12465324-12465425)
chr7 (16-117)||(20620173-20620274)
chr7 (16-114)||(14180465-14180563)
chr7 (16-118)||(46386151-46386253)
chr7 (16-117)||(13147536-13147637)
chr7 (16-117)||(20214034-20214135)
chr7 (16-117)||(12322994-12323095)
chr7 (16-117)||(12372161-12372262)
chr7 (16-117)||(8851223-8851324)
chr7 (16-117)||(16999320-16999422)
chr7 (16-117)||(11067355-11067456)
chr7 (16-117)||(12127227-12127328)
chr7 (16-117)||(20586239-20586340)
chr7 (16-117)||(32433653-32433754)
chr7 (16-117)||(10277215-10277315)
chr7 (16-91)||(24270037-24270112)
chr7 (479-560)||(8911865-8911947)
chr7 (119-196)||(12662362-12662439)
chr7 (478-577)||(15765390-15765488)
chr7 (502-605)||(4892096-4892200)
chr7 (475-605)||(5647744-5647879)
chr7 (21-110)||(33002053-33002141)
chr7 (59-115)||(15095703-15095759)
chr7 (59-115)||(15140143-15140199)
chr7 (59-115)||(8135303-8135359)
chr7 (59-115)||(13132387-13132443)
chr7 (57-112)||(47974889-47974944)
chr7 (61-115)||(12557853-12557907)
chr7 (59-117)||(13698703-13698761)
chr7 (60-115)||(15623950-15624005)
chr7 (16-59)||(25942358-25942401)
chr7 (52-95)||(25943041-25943084)
chr7 (547-601)||(42016362-42016416)
chr7 (69-115)||(35771508-35771554)
chr7 (61-111)||(41284963-41285013)
chr7 (538-602)||(19881356-19881421)
chr7 (534-601)||(15685120-15685187)
chr7 (534-597)||(15821922-15821986)
chr7 (59-115)||(48807392-48807448)
chr7 (551-605)||(3335220-3335275)
chr7 (547-605)||(17014731-17014789)
chr7 (69-115)||(4071759-4071805)
chr7 (69-115)||(14218962-14219008)
chr7 (321-362)||(15684941-15684983)
chr7 (551-601)||(19242988-19243038)
chr7 (73-115)||(36685211-36685253)
chr7 (59-115)||(11054642-11054699)
[»] chr2 (32 HSPs)
chr2 (16-117)||(24516073-24516174)
chr2 (16-117)||(17307373-17307474)
chr2 (16-117)||(27484541-27484642)
chr2 (16-117)||(9975816-9975917)
chr2 (16-117)||(24436535-24436636)
chr2 (13-117)||(5031193-5031297)
chr2 (16-112)||(24780909-24781005)
chr2 (16-117)||(19201264-19201365)
chr2 (16-117)||(40912207-40912308)
chr2 (470-597)||(22517494-22517624)
chr2 (16-117)||(36841151-36841252)
chr2 (29-117)||(22251512-22251600)
chr2 (16-117)||(2523811-2523912)
chr2 (16-117)||(37270587-37270687)
chr2 (475-605)||(22935543-22935675)
chr2 (475-605)||(22941507-22941639)
chr2 (475-605)||(22955402-22955534)
chr2 (495-602)||(29755580-29755688)
chr2 (59-115)||(25142133-25142189)
chr2 (57-112)||(1383612-1383667)
chr2 (59-115)||(3539766-3539822)
chr2 (57-112)||(357809-357864)
chr2 (58-112)||(24884399-24884453)
chr2 (327-362)||(29755506-29755541)
chr2 (59-115)||(19358820-19358877)
chr2 (59-115)||(18388256-18388312)
chr2 (534-601)||(21065996-21066063)
chr2 (67-115)||(27852605-27852653)
chr2 (551-605)||(12369206-12369261)
chr2 (547-597)||(17332297-17332347)
chr2 (64-115)||(22259974-22260024)
chr2 (69-113)||(18390282-18390326)
[»] scaffold1766 (1 HSPs)
scaffold1766 (16-117)||(760-861)
[»] scaffold0407 (1 HSPs)
scaffold0407 (16-117)||(11338-11439)
[»] chr6 (30 HSPs)
chr6 (16-117)||(7827859-7827960)
chr6 (16-117)||(19655295-19655396)
chr6 (16-117)||(15890776-15890877)
chr6 (16-117)||(23150351-23150452)
chr6 (16-117)||(27125541-27125642)
chr6 (31-117)||(27330045-27330131)
chr6 (31-117)||(27390785-27390871)
chr6 (16-117)||(18703451-18703556)
chr6 (16-117)||(18709386-18709491)
chr6 (478-605)||(19170385-19170513)
chr6 (483-597)||(20047276-20047391)
chr6 (483-597)||(20039469-20039584)
chr6 (119-196)||(13826181-13826258)
chr6 (20-92)||(19167926-19167998)
chr6 (122-201)||(14474073-14474152)
chr6 (475-605)||(24142192-24142325)
chr6 (475-605)||(24148682-24148815)
chr6 (478-577)||(1550887-1550985)
chr6 (20-95)||(19235015-19235089)
chr6 (20-95)||(30673480-30673556)
chr6 (21-94)||(28948466-28948539)
chr6 (57-112)||(18585733-18585788)
chr6 (547-601)||(22073369-22073423)
chr6 (63-115)||(18928614-18928666)
chr6 (63-115)||(19401028-19401080)
chr6 (547-597)||(15664970-15665020)
chr6 (26-91)||(18259262-18259328)
chr6 (320-362)||(21962711-21962752)
chr6 (59-115)||(23501601-23501658)
chr6 (81-117)||(24267801-24267837)
[»] chr1 (25 HSPs)
chr1 (16-117)||(19676598-19676699)
chr1 (16-117)||(21046113-21046214)
chr1 (16-117)||(42912936-42913037)
chr1 (16-117)||(16058378-16058478)
chr1 (16-117)||(20633695-20633799)
chr1 (119-204)||(45497278-45497363)
chr1 (21-112)||(51324396-51324487)
chr1 (57-112)||(44822090-44822145)
chr1 (547-604)||(20519661-20519718)
chr1 (530-601)||(6196550-6196622)
chr1 (469-601)||(6204401-6204529)
chr1 (478-605)||(16886170-16886297)
chr1 (59-115)||(7320660-7320716)
chr1 (59-115)||(22350646-22350702)
chr1 (20-95)||(21168825-21168899)
chr1 (77-115)||(13302849-13302887)
chr1 (321-362)||(6196774-6196814)
chr1 (321-362)||(6204625-6204665)
chr1 (502-591)||(39455679-39455770)
chr1 (57-112)||(24723420-24723475)
chr1 (551-601)||(45498412-45498463)
chr1 (57-94)||(7052009-7052046)
chr1 (59-92)||(8276079-8276112)
chr1 (59-92)||(38056762-38056795)
chr1 (32-92)||(4595935-4595995)
[»] scaffold1283 (1 HSPs)
scaffold1283 (16-117)||(532-633)
[»] scaffold0737 (1 HSPs)
scaffold0737 (16-117)||(4778-4879)
[»] scaffold0632 (1 HSPs)
scaffold0632 (16-117)||(1052-1153)
[»] scaffold0334 (1 HSPs)
scaffold0334 (16-117)||(405-506)
[»] scaffold0207 (1 HSPs)
scaffold0207 (16-117)||(13456-13557)
[»] scaffold0111 (2 HSPs)
scaffold0111 (16-117)||(5270-5371)
scaffold0111 (21-117)||(12597-12693)
[»] scaffold0064 (2 HSPs)
scaffold0064 (16-117)||(58633-58734)
scaffold0064 (321-357)||(8078-8114)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-117)||(146610-146711)
[»] scaffold0020 (2 HSPs)
scaffold0020 (16-117)||(169063-169164)
scaffold0020 (16-117)||(143498-143599)
[»] scaffold1633 (1 HSPs)
scaffold1633 (16-117)||(1092-1193)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-117)||(34226-34327)
[»] scaffold0001 (3 HSPs)
scaffold0001 (16-117)||(77574-77675)
scaffold0001 (16-117)||(31881-31982)
scaffold0001 (16-117)||(37188-37289)
[»] scaffold0080 (1 HSPs)
scaffold0080 (16-117)||(21857-21958)
[»] scaffold0075 (2 HSPs)
scaffold0075 (478-607)||(57107-57236)
scaffold0075 (321-362)||(56947-56988)
[»] chr5 (19 HSPs)
chr5 (16-117)||(21300108-21300209)
chr5 (16-117)||(19921525-19921626)
chr5 (30-117)||(7484903-7484990)
chr5 (119-196)||(22961437-22961514)
chr5 (20-90)||(20566445-20566515)
chr5 (483-597)||(25449161-25449276)
chr5 (32-94)||(31622028-31622090)
chr5 (478-605)||(23576002-23576130)
chr5 (475-605)||(26547088-26547221)
chr5 (57-112)||(31456888-31456943)
chr5 (57-112)||(36508702-36508757)
chr5 (58-112)||(17876132-17876186)
chr5 (483-561)||(29902598-29902676)
chr5 (59-115)||(21405694-21405751)
chr5 (28-77)||(22111715-22111764)
chr5 (483-607)||(33313153-33313272)
chr5 (63-115)||(21617995-21618047)
chr5 (57-96)||(30138059-30138098)
chr5 (61-111)||(31251961-31252011)
[»] scaffold0004 (3 HSPs)
scaffold0004 (16-117)||(328354-328455)
scaffold0004 (26-95)||(72841-72910)
scaffold0004 (28-95)||(75691-75752)
[»] scaffold0002 (4 HSPs)
scaffold0002 (475-601)||(297987-298113)
scaffold0002 (119-196)||(121707-121784)
scaffold0002 (523-601)||(122720-122799)
scaffold0002 (569-601)||(361472-361504)
[»] scaffold0285 (1 HSPs)
scaffold0285 (20-95)||(19652-19727)
[»] scaffold0049 (1 HSPs)
scaffold0049 (478-605)||(22055-22182)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-90)||(78955-79025)
[»] scaffold0551 (1 HSPs)
scaffold0551 (478-605)||(6628-6755)
[»] scaffold0149 (2 HSPs)
scaffold0149 (42-117)||(29637-29711)
scaffold0149 (57-112)||(21539-21594)
[»] scaffold1855 (1 HSPs)
scaffold1855 (483-597)||(743-858)
[»] scaffold0032 (1 HSPs)
scaffold0032 (483-593)||(27681-27792)
[»] scaffold0573 (2 HSPs)
scaffold0573 (483-597)||(535-650)
scaffold0573 (483-597)||(1132-1247)
[»] scaffold0037 (4 HSPs)
scaffold0037 (21-115)||(113034-113127)
scaffold0037 (63-115)||(81501-81553)
scaffold0037 (21-92)||(117890-117960)
scaffold0037 (506-577)||(77545-77614)
[»] scaffold1904 (1 HSPs)
scaffold1904 (122-179)||(36-93)
[»] scaffold1312 (1 HSPs)
scaffold1312 (122-179)||(2018-2075)
[»] scaffold0174 (3 HSPs)
scaffold0174 (26-95)||(11287-11356)
scaffold0174 (26-95)||(5167-5236)
scaffold0174 (27-95)||(19605-19672)
[»] scaffold0048 (1 HSPs)
scaffold0048 (480-601)||(3832-3950)
[»] scaffold0956 (2 HSPs)
scaffold0956 (478-605)||(476-598)
scaffold0956 (324-362)||(699-737)
[»] scaffold1796 (2 HSPs)
scaffold1796 (478-577)||(431-529)
scaffold1796 (323-358)||(280-315)
[»] scaffold0540 (2 HSPs)
scaffold0540 (478-577)||(1568-1663)
scaffold0540 (326-362)||(1797-1833)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-94)||(6620-6686)
[»] scaffold0100 (1 HSPs)
scaffold0100 (30-95)||(26713-26779)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-117)||(78249-78298)
[»] scaffold0112 (1 HSPs)
scaffold0112 (20-95)||(2787-2863)
[»] scaffold0050 (1 HSPs)
scaffold0050 (534-605)||(39679-39750)
[»] scaffold0378 (2 HSPs)
scaffold0378 (547-605)||(2271-2329)
scaffold0378 (321-362)||(2062-2104)
[»] scaffold0113 (1 HSPs)
scaffold0113 (55-117)||(35418-35478)
[»] scaffold0067 (2 HSPs)
scaffold0067 (547-602)||(43126-43181)
scaffold0067 (326-362)||(43382-43418)
[»] scaffold0848 (1 HSPs)
scaffold0848 (59-117)||(2085-2143)
[»] scaffold0101 (1 HSPs)
scaffold0101 (469-601)||(15385-15513)
[»] scaffold0503 (2 HSPs)
scaffold0503 (538-605)||(532-600)
scaffold0503 (538-605)||(5099-5167)
[»] scaffold0156 (1 HSPs)
scaffold0156 (57-117)||(16532-16592)
[»] scaffold0028 (1 HSPs)
scaffold0028 (59-115)||(3118-3174)
[»] scaffold0230 (1 HSPs)
scaffold0230 (57-112)||(6754-6809)
[»] scaffold0083 (1 HSPs)
scaffold0083 (21-115)||(10821-10913)
[»] scaffold0439 (1 HSPs)
scaffold0439 (58-115)||(12323-12380)
[»] scaffold0175 (2 HSPs)
scaffold0175 (59-115)||(8571-8628)
scaffold0175 (26-91)||(18744-18810)
[»] scaffold0007 (1 HSPs)
scaffold0007 (54-115)||(158888-158949)
[»] scaffold0269 (2 HSPs)
scaffold0269 (484-577)||(13261-13350)
scaffold0269 (327-362)||(13469-13504)
[»] scaffold0243 (1 HSPs)
scaffold0243 (551-599)||(22300-22348)
[»] scaffold0084 (1 HSPs)
scaffold0084 (484-562)||(35523-35598)
[»] scaffold0420 (1 HSPs)
scaffold0420 (551-601)||(12396-12446)
[»] scaffold0152 (4 HSPs)
scaffold0152 (547-601)||(14770-14824)
scaffold0152 (550-601)||(14993-15044)
scaffold0152 (550-601)||(15063-15114)
scaffold0152 (550-601)||(14845-14896)
[»] scaffold0014 (1 HSPs)
scaffold0014 (547-597)||(5082-5132)
[»] scaffold0008 (1 HSPs)
scaffold0008 (60-115)||(135570-135625)
[»] scaffold0815 (1 HSPs)
scaffold0815 (321-362)||(3881-3921)
[»] scaffold0040 (1 HSPs)
scaffold0040 (57-106)||(106126-106175)
[»] scaffold0859 (1 HSPs)
scaffold0859 (59-111)||(4612-4664)
[»] scaffold0180 (1 HSPs)
scaffold0180 (59-115)||(28395-28451)
[»] scaffold0379 (1 HSPs)
scaffold0379 (64-95)||(10741-10772)
[»] scaffold0251 (1 HSPs)
scaffold0251 (64-115)||(20152-20202)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-117)||(7205-7264)
[»] scaffold0116 (1 HSPs)
scaffold0116 (59-114)||(35531-35586)
[»] scaffold0628 (1 HSPs)
scaffold0628 (13-115)||(1125-1226)
[»] scaffold0577 (1 HSPs)
scaffold0577 (73-115)||(9004-9046)
[»] scaffold0435 (1 HSPs)
scaffold0435 (547-605)||(6980-7037)
[»] scaffold0458 (1 HSPs)
scaffold0458 (502-591)||(7947-8038)
[»] scaffold0328 (1 HSPs)
scaffold0328 (59-92)||(18731-18764)
[»] scaffold0220 (1 HSPs)
scaffold0220 (59-92)||(13878-13911)
[»] scaffold0182 (1 HSPs)
scaffold0182 (321-362)||(6508-6548)
[»] scaffold0151 (1 HSPs)
scaffold0151 (66-115)||(31046-31094)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-114)||(67060-67105)
[»] scaffold0422 (1 HSPs)
scaffold0422 (330-362)||(5324-5356)
[»] scaffold0308 (1 HSPs)
scaffold0308 (59-115)||(13370-13426)
[»] scaffold0011 (1 HSPs)
scaffold0011 (321-357)||(201543-201579)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 22174399 - 22174263
Alignment:
Q  469 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggt 568  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22174399 ctagaacatggatgttagaatgtaaattaggctttgatgtaattaatttatttattttcttgtcgtttattttctgcagaccttagaatgtataataggt 22174300  T
Q  569 tttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||||||||||||||||||||||||||    
T  22174299 tttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 22174263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 25091540 - 25091641
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  116 at 117  Q
    ||    
T  25091640 at 25091641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 11425825 - 11425931
Alignment:
Q  11 gatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacct 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  111 acaacat 117  Q
    |||||||    
T  11425925 acaacat 11425931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 10356601 - 10356500
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  116 at 117  Q
    ||    
T  10356501 at 10356500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 53630639 - 53630538
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  116 at 117  Q
    ||    
T  53630539 at 53630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 16998412 - 16998513
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  116 at 117  Q
    ||    
T  16998512 at 16998513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 42875684 - 42875785
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  116 at 117  Q
    ||    
T  42875784 at 42875785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 15115109 - 15115210
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  116 at 117  Q
    ||    
T  15115209 at 15115210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 37019561 - 37019658
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37019561 caattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacat 37019658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 478 - 607
Target Start/End: Original strand, 17409 - 17538
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||||||| ||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||    
T  17409 ggatgttataatgtaaattaggctttgatgtaaataatttatttgttttcttgtcatttattttctgcagacattagaatgcataataggttttatgtaa 17508  T
Q  578 tagtcgtaggtgcatgtgtgcgtgtgtgcg 607  Q
    |||   ||||||||||||||||||||||||    
T  17509 tagctttaggtgcatgtgtgcgtgtgtgcg 17538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 19610211 - 19610312
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  116 at 117  Q
    ||    
T  19610311 at 19610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6633701 - 6633601
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  116 at 117  Q
    ||    
T  6633602 at 6633601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 46001695 - 46001595
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  116 at 117  Q
    ||    
T  46001596 at 46001595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 483 - 597
Target Start/End: Original strand, 14926284 - 14926399
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattt--tcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaata 579  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  14926284 ttagaatgtacaataggcattgatgtaaataatttatttatttcttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaata 14926382  T
Q  580 gtcgtaggtgcatgtgtg 597  Q
    || |||||||||||||||    
T  14926383 gt-gtaggtgcatgtgtg 14926399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 26921774 - 26921708
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26921774 cacaaattcattggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 16719501 - 16719379
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtata-ataggttttatgta 576  Q
    |||||||||||||||||||||| |||||||||| |||||||     ||||||||| |||||||||||| |||||||||||||| | |||  |||| ||||    
T  16719501 ggatgttagaatgtaaattaggctttgatgtaaataattta-----tttcttgtcatttattttctgcagaccttagaatgtaaatataatttttttgta 16719407  T
Q  577 atagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||  |||||||||| ||| |||||||    
T  16719406 atagt-ttaggtgcatgggtgtgtgtgtg 16719379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 27342380 - 27342262
Alignment:
Q  480 atgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggtttt-atgtaat 578  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||   |||||||| ||||||||| || ||| |||||||||||  ||| |||| |||||||    
T  27342380 atgttagaatgtaaactaggctta-atgtaaataatttattt---ttcttgtcatttattttccgcagactttagaatgtatcgtagttttttatgtaat 27342285  T
Q  579 agtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||||||||||||    
T  27342284 agtcgtaggtgcatgtgtgcgtg 27342262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 25985899 - 25986002
Alignment:
Q  502 ttgatgtaattaatttatttattttcttgtcgtttatttt-ctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcg 599  Q
    ||||||||| |||||||||| |||||||||| |||||||| | || ||| ||| ||||||| ||||| |||||||||||||| ||||||||||| |||||    
T  25985899 ttgatgtaaataatttattt-ttttcttgtcatttatttttccgcagacttta-aatgtatcataggcttttatgtaatagttgtaggtgcatgggtgcg 25985996  T
Q  600 tgtgtg 605  Q
    ||||||    
T  25985997 tgtgtg 25986002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 22174535 - 22174495
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattg 361  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22174535 tgcacacccctgaatactgctgcacccccaccttgtgattg 22174495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 9924085 - 9924139
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 9924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 7945273 - 7945314
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  7945273 tgcacgcccctgaatactgctgcacccccaccttgtgattga 7945314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 7945466 - 7945533
Alignment:
Q  534 tttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||  ||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  7945466 tttatttattgcagaccttagaatgta-aataggcttttatgtattagtcgtaggtgcatgtgtgcgtg 7945533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 14549695 - 14549743
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctac 14549743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 602
Target Start/End: Complemental strand, 15579258 - 15579151
Alignment:
Q  487 aatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgt 584  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||        ||||||| |||||||||||||| |||||| |||| |||||||||  |    
T  15579258 aatgtaaattaggctttgatgtaaataatttatttacttttcttg--------tttctgcagaccttagaatgta-aataggattttttgtaatagt-tt 15579169  T
Q  585 aggtgcatgtgtgcgtgt 602  Q
    ||||||||||||||||||    
T  15579168 aggtgcatgtgtgcgtgt 15579151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 550 - 601
Target Start/End: Complemental strand, 15878654 - 15878603
Alignment:
Q  550 cttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  15878654 cttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 15878603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 9870568 - 9870513
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctaca 113  Q
    ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||    
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctaca 9870513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 13101643 - 13101697
Alignment:
Q  547 gaccttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  13101643 gaccttagaatgta-aataggctttgatgtaatagtcgtaggtgcatgtgtgcgtg 13101697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 16361606 - 16361660
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  16361606 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtacatgtgtgcgtg 16361660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 17249 - 17290
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  17249 tgcacacccttgaatgctgctgcacccccaccttgtgattga 17290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 3440726 - 3440766
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  3440726 tgcacacccctgaatactgctgca-ccccaccttgtgattga 3440766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 568 - 601
Target Start/End: Original strand, 44623327 - 44623360
Alignment:
Q  568 ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||||||||||||||||||||||||||    
T  44623327 ttttatgtaatagtcgtaggtgcatgtgtgcgtg 44623360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 602
Target Start/End: Complemental strand, 15566612 - 15566505
Alignment:
Q  487 aatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgt 584  Q
    ||||| ||||||| |||||||||| ||||||||||| |||||||||        |||||| |||||||||||||| |||||| |||| |||||||||  |    
T  15566612 aatgttaattaggctttgatgtaaataatttatttacttttcttgt--------ttctgcagaccttagaatgta-aataggattttttgtaatagtt-t 15566523  T
Q  585 aggtgcatgtgtgcgtgt 602  Q
    ||||||||||||||||||    
T  15566522 aggtgcatgtgtgcgtgt 15566505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 27028642 - 27028708
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | ||||||||||||||||||    
T  27028642 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaa 27028708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 9638939 - 9638972
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 15566741 - 15566708
Alignment:
Q  329 cctgaatactgctgcacccccaccttgtgattga 362  Q
    |||| |||||||||||||||||||||||||||||    
T  15566741 cctggatactgctgcacccccaccttgtgattga 15566708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 15579387 - 15579354
Alignment:
Q  329 cctgaatactgctgcacccccaccttgtgattga 362  Q
    |||| |||||||||||||||||||||||||||||    
T  15579387 cctggatactgctgcacccccaccttgtgattga 15579354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 597
Target Start/End: Original strand, 18216994 - 18217023
Alignment:
Q  568 ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    ||||||||||||||||||||||||||||||    
T  18216994 ttttatgtaatagtcgtaggtgcatgtgtg 18217023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 581
Target Start/End: Complemental strand, 23995346 - 23995281
Alignment:
Q  516 ttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaatagt 581  Q
    ||||||||||||||||| |||  ||||  | |||  ||||||||||||||||||| ||||||||||    
T  23995346 ttatttattttcttgtcattttatttccacggactatagaatgtataataggtttaatgtaatagt 23995281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 11478772 - 11478720
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||| |||||||||| ||||||||||| |||| ||| |||||||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaac 11478720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 125; Significance: 4e-64; HSPs: 6)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 12913 - 12777
Alignment:
Q  469 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggt 568  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12913 ctagaacatggatcttagaatgtaaattaggttttgatgtaatttatttatttattttcttgtcgtttattttctgcagaccttagaatgtataataggt 12814  T
Q  569 tttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||||||||||||||||||||||||||    
T  12813 tttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 12777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 469 - 598
Target Start/End: Complemental strand, 22601 - 22472
Alignment:
Q  469 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggt 568  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  22601 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaattaatttattttcttgtcgtttattttctgcagaccttagaatgtataattggt 22502  T
Q  569 tttatgtaatagtcgtaggtgcatgtgtgc 598  Q
    |||||||||||||||||| |||||||||||    
T  22501 tttatgtaatagtcgtagctgcatgtgtgc 22472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 23727 - 23615
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggacgagatttttacaga 218  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||||| ||||    
T  23727 aagccacttcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaaccgaggacgggatttttccaga 23628  T
Q  219 agcaaaaaacatc 231  Q
    |||||||||||||    
T  23627 agcaaaaaacatc 23615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 248 - 367
Target Start/End: Complemental strand, 13134 - 13014
Alignment:
Q  248 ctgtgaatcggtctaaccctgtggcccatctgcgcgccccatgccctaaacccaataatcnnnnnnn-actaaatgcacacccctgaatactgctgcacc 346  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||||        ||||| ||||||||||||||||||||||||||    
T  13134 ctgtgaactggtctaaccctatggcccatctgcgcgccccatgccctaagcccaataatcttttttttactaactgcacacccctgaatactgctgcacc 13035  T
Q  347 cccaccttgtgattgagcctc 367  Q
    |||||||||||||||||||||    
T  13034 cccaccttgtgattgagcctc 13014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 248 - 367
Target Start/End: Complemental strand, 22818 - 22701
Alignment:
Q  248 ctgtgaatcggtctaaccctgtggcccatctgcgcgccccatgccctaaacccaataatcnnnnnnn-actaaatgcacacccctgaatactgctgcacc 346  Q
    ||||||| |||||| |||||||||||||||||||||||||||   |||| ||||||||||        ||| | ||||||||||||||||||||||||||    
T  22818 ctgtgaaccggtctgaccctgtggcccatctgcgcgccccat---ctaagcccaataatcttttttttactcactgcacacccctgaatactgctgcacc 22722  T
Q  347 cccaccttgtgattgagcctc 367  Q
    |||||||||||||||||||||    
T  22721 cccaccttgtgattgagcctc 22701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 24235 - 24195
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacat 24195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 103; Significance: 6e-51; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 3069 - 3171
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  116 ata 118  Q
    |||    
T  3169 ata 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 2451 - 2552
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 2550  T
Q  116 at 117  Q
    ||    
T  2551 at 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 49900608 - 49900718
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  107 acctacaacat 117  Q
    |||||||||||    
T  49900708 acctacaacat 49900718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 17519038 - 17518937
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  116 at 117  Q
    ||    
T  17518938 at 17518937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 17533900 - 17533799
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  116 at 117  Q
    ||    
T  17533800 at 17533799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 40807883 - 40807984
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  116 at 117  Q
    ||    
T  40807983 at 40807984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 40812720 - 40812821
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  116 at 117  Q
    ||    
T  40812820 at 40812821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 50348191 - 50348090
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  116 at 117  Q
    ||    
T  50348091 at 50348090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 17044853 - 17044954
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  116 at 117  Q
    ||    
T  17044953 at 17044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 17538993 - 17539094
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  116 at 117  Q
    ||    
T  17539093 at 17539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 41172534 - 41172435
Alignment:
Q  18 atcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 17047013 - 17047114
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  116 at 117  Q
    ||    
T  17047113 at 17047114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 22306736 - 22306647
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22306736 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacat 22306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 44274305 - 44274406
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  116 at 117  Q
    ||    
T  44274405 at 44274406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 10311415 - 10311515
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  116 at 117  Q
    ||    
T  10311514 at 10311515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 10563596 - 10563696
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  116 at 117  Q
    ||    
T  10563695 at 10563696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 11259318 - 11259419
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  116 at 117  Q
    ||    
T  11259418 at 11259419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 17693954 - 17694055
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  116 at 117  Q
    ||    
T  17694054 at 17694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 35354489 - 35354590
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  116 at 117  Q
    ||    
T  35354589 at 35354590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 15931672 - 15931571
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||| |||||| ||||||||||||||| |||    
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  116 at 117  Q
    ||    
T  15931572 at 15931571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaac 80  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 4434096 - 4434153
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4434096 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 4434153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 4454891 - 4454948
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4454891 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 4454948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 30068309 - 30068232
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||| ||||    
T  30068309 aagccgattcatggtcctttaatctatttccttttaagaatttgtattagcctttaaaagaaagagaggaaatcagaa 30068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 18887854 - 18887794
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  18887854 aagccaattcatggtcctttgatctatttccttttaagaatttgtatcagcctttaaaaga 18887794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 30063501 - 30063383
Alignment:
Q  480 atgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaat 578  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||   |||||||| ||||||||| ||  || ||||||||||| ||||| |||||||||||    
T  30063501 atgttagaatgtaaactaggctta-atgtaaataatttattt---ttcttgtcatttattttccgcaaactttagaatgtatcataggcttttatgtaat 30063406  T
Q  579 agtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||||||||||||    
T  30063405 agtcgtaggtgcatgtgtgcgtg 30063383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 523 - 601
Target Start/End: Complemental strand, 18890990 - 18890911
Alignment:
Q  523 ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18890990 ttttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 18890911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 523 - 601
Target Start/End: Complemental strand, 18901173 - 18901094
Alignment:
Q  523 ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18901173 ttttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 18901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 14508749 - 14508835
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttc-aaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||| | |||| |||||||| |  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacat 14508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 19568368 - 19568274
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||  |||||||||||| |||||| |   ||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  19568368 aattctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaac 19568274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 35064658 - 35064605
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacat 35064605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 597
Target Start/End: Original strand, 4435110 - 4435224
Alignment:
Q  480 atgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaat 578  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||   |||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||| |    
T  4435110 atgttagaatgtaaactaggctta-atgtaaataatttattt---ttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtagt 4435205  T
Q  579 agtcgtaggtgcatgtgtg 597  Q
    |||||||||||||||||||    
T  4435206 agtcgtaggtgcatgtgtg 4435224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 597
Target Start/End: Original strand, 4455901 - 4456015
Alignment:
Q  480 atgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaat 578  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||   |||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||| |    
T  4455901 atgttagaatgtaaactaggctta-atgtaaataatttattt---ttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtagt 4455996  T
Q  579 agtcgtaggtgcatgtgtg 597  Q
    |||||||||||||||||||    
T  4455997 agtcgtaggtgcatgtgtg 4456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 18892081 - 18892021
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  18892081 aagccaattcatggtcttttgatctatttccttttaagaatttgtatcagcctttaaaaga 18892021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 18902264 - 18902204
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  18902264 aagccaattcatggtcttttgatctatttccttttaagaatttgtatcagcctttaaaaga 18902204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 523 - 597
Target Start/End: Complemental strand, 18886748 - 18886673
Alignment:
Q  523 ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    |||||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  18886748 ttttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgtgtg 18886673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 11563654 - 11563710
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaac 11563710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 9511076 - 9510985
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  9511076 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9510985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 9519051 - 9518960
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  9519051 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9518960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 40999552 - 40999626
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||   ||||||||| ||||    
T  40999552 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttaaaagaaggagaggaaatcagaa 40999626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 41008335 - 41008409
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||   ||||||||| ||||    
T  41008335 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttaaaagaaggagaggaaatcagaa 41008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 42324094 - 42324036
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacat 42324036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 27552535 - 27552461
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || |||| |||||   ||||||||| ||||    
T  27552535 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttgaaagaaggagaggaaatcagaa 27552461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 33565018 - 33565072
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 33565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 49965968 - 49965872
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||| |||||||||||| |||  ||| |||||| |||||||||||||||   ||| ||||||||| ||  |||||||||||||||||||| || ||||||    
T  49965968 ggatattagaatgtaaactagactttaatgtaaataatttatttatttt---gtcctttattttccgcataccttagaatgtataataggcttaatgtaa 49965872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 49968981 - 49968925
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||| |||||||    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaac 49968925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 8805116 - 8805170
Alignment:
Q  547 gaccttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  8805116 gaccttagaatgta-aataggctttgatgtaatagtcgtaggtgcatgtgtgcgtg 8805170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 8813516 - 8813570
Alignment:
Q  547 gaccttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  8813516 gaccttagaatgta-aataggctttgatgtaatagtcgtaggtgcatgtgtgcgtg 8813570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 15628562 - 15628616
Alignment:
Q  547 gaccttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  15628562 gaccttagaatgta-aataggctttgatgtaatagtcgtaggtgcatgtgtgcgtg 15628616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 19834727 - 19834781
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  19834727 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtacatgtgtgcgtg 19834781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 37038978 - 37039037
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||||||||||||||    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacat 37039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 13185834 - 13185880
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 13185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 605
Target Start/End: Original strand, 16015095 - 16015177
Alignment:
Q  523 ttttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||| | ||||||||| || ||  ||||||| |||||||||||| |||||||||   |||||||||||||| |||||||    
T  16015095 ttttcttgccatttattttccgcagattttagaatatataataggtttaatgtaatagctttaggtgcatgtgtgtgtgtgtg 16015177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 35961049 - 35960995
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||| |||||||||| ||||||| ||| |||| |||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaac 35960995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 15621201 - 15621252
Alignment:
Q  547 gaccttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtgc 598  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  15621201 gaccttagaatgta-aataggctttgatgtaatagtcgtaggtgcatgtgtgc 15621252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 601
Target Start/End: Complemental strand, 5650456 - 5650402
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||    
T  5650456 gaccttagaatgta-aataggcttttatgtaatagtcgtaggaacatgtgtgcgtg 5650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Complemental strand, 15577986 - 15577928
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||| ||| |||||||    
T  15577986 gaccttagaatgta-aataggcttttatgtaatagttgtaggtgcatgggtgtgtgtgtg 15577928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Complemental strand, 15609053 - 15608995
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||| ||| |||||||    
T  15609053 gaccttagaatgta-aataggcttttatgtaatagttgtaggtgcatgggtgtgtgtgtg 15608995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 15910413 - 15910452
Alignment:
Q  323 cacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  15910413 cacaccccataatactgctgcacccccaccttgtgattga 15910452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Original strand, 15910690 - 15910748
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||| ||| |||||||    
T  15910690 gaccttagaatgta-aataggcttttatgtaatagttgtaggtgcatgggtgtgtgtgtg 15910748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 15924656 - 15924695
Alignment:
Q  323 cacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  15924656 cacaccccataatactgctgcacccccaccttgtgattga 15924695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Original strand, 15924933 - 15924991
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||| ||| |||||||    
T  15924933 gaccttagaatgta-aataggcttttatgtaatagttgtaggtgcatgggtgtgtgtgtg 15924991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 45530725 - 45530668
Alignment:
Q  59 caaccaattacaacttcaaaacctaa-ttcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| || ||||| ||| |||||||||| |||||||||| |||||    
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaac 45530668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 5650623 - 5650591
Alignment:
Q  330 ctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||| ||||||||||||||||||||||||||    
T  5650623 ctgaatgctgctgcacccccaccttgtgattga 5650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 19834560 - 19834592
Alignment:
Q  330 ctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||| ||||||||||||||||||||||||||    
T  19834560 ctgaatgctgctgcacccccaccttgtgattga 19834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 22146880 - 22146832
Alignment:
Q  59 caaccaattacaacttcaaaacctaa-ttcccaaattcccataactaca 106  Q
    ||||||||||||||||| || ||||| |||||||||||||| |||||||    
T  22146880 caaccaattacaacttctaaccctaatttcccaaattcccaaaactaca 22146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 25 - 126
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  116 at 117  Q
    ||    
T  125 at 126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 5082377 - 5082276
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  116 at 117  Q
    ||    
T  5082277 at 5082276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 5761421 - 5761522
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  116 at 117  Q
    ||    
T  5761521 at 5761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 20083812 - 20083702
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 106  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  107 acctacaacat 117  Q
    |||||||||||    
T  20083712 acctacaacat 20083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6573221 - 6573120
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  116 at 117  Q
    ||    
T  6573121 at 6573120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 19140659 - 19140751
Alignment:
Q  23 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140659 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19140751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 470 - 605
Target Start/End: Complemental strand, 27807239 - 27807104
Alignment:
Q  470 tagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggtt 569  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  27807239 tagagcatggatgttagaatgtaaattaggctttgatgtaaataaattatttattttcttgtcatttattttctgcagaccttagaatgtataataggtt 27807140  T
Q  570 ttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||  ||||||   ||||||||||||||||||||||    
T  27807139 ttacctaatagctttaggtgcatgtgtgcgtgtgtg 27807104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 42818072 - 42817971
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  116 at 117  Q
    ||    
T  42817972 at 42817971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 39936175 - 39936075
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  116 a 116  Q
    |    
T  39936075 a 39936075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 20178704 - 20178593
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattcccataactac 105  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  106 aacctacaacat 117  Q
    ||||||||||||    
T  20178604 aacctacaacat 20178593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6101918 - 6101817
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  116 at 117  Q
    ||    
T  6101818 at 6101817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 6202664 - 6202764
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  116 at 117  Q
    ||    
T  6202763 at 6202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 37292593 - 37292693
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  116 at 117  Q
    ||    
T  37292692 at 37292693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 17974051 - 17974128
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  17974051 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 17974128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 20725670 - 20725747
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  20725670 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaagagaggaaatcagaa 20725747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 518 - 607
Target Start/End: Original strand, 20734538 - 20734627
Alignment:
Q  518 atttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtgcg 607  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  20734538 atttattctcttgtcattcattttctgcagaccttagaatgtataataggttttatgtaatagctttaggtgcatgtgtgcgtgtgtgcg 20734627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 20738568 - 20738645
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  20738568 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaagagaggaaatcagaa 20738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 20746857 - 20746943
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggacg 205  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||| |||| || |||||    
T  20746857 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcaacctttaaaagaaagagaggaaatcagaactggggacg 20746943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 20733611 - 20733668
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaa 176  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20733611 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaa 20733668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 20397656 - 20397590
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaa 92  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaa 20397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 21474092 - 21473959
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta-ttttctgccgaccttagaatgtataatagg--tt 569  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  ||||||| || |||| |||| ||| |||||||||||||| ||||||  ||    
T  21474092 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttatcatttatttttttgcagaccttagaatgta-aataggtttt 21473994  T
Q  570 ttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    || |||||||||  ||||||||||||||||||||||    
T  21473993 ttttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 21473959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 31722661 - 31722560
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| |||||||||  |||||||| ||||| |||||||   | ||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||    
T  31722661 tggacattaattctacatcaattcaacagattt-ctactcttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctac 31722563  T
Q  113 aac 115  Q
    |||    
T  31722562 aac 31722560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 39694437 - 39694343
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||| |||||||| |||| |||||| |    ||||| ||||||||| || || ||||||||||||||||||| ||||||||||||||||    
T  39694437 aattctacaccaattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaac 39694343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 577
Target Start/End: Original strand, 20726643 - 20726702
Alignment:
Q  518 atttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  20726643 atttattctcttgtcattcattttctgcagaccttagaatgtataatatgttttatgtaa 20726702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 577
Target Start/End: Original strand, 20739541 - 20739600
Alignment:
Q  518 atttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  20739541 atttattctcttgtcattcattttctgcagaccttagaatgtataatatgttttatgtaa 20739600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 22532292 - 22532201
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| |||||||||||||    
T  22532292 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctac 22532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 22536977 - 22536886
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| |||||||||||||    
T  22536977 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctac 22536886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 22318033 - 22317981
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    ||||||||||||||||| |||||||| ||||||||||||  ||||||||||||    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaaccta 22317981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 42265631 - 42265575
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 42265575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 45469342 - 45469286
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||| ||||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaac 45469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 597
Target Start/End: Complemental strand, 23641031 - 23640984
Alignment:
Q  551 ttagaatgtataataggtttt-atgtaatagtcgtaggtgcatgtgtg 597  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  23641031 ttagaatgtataataggtttttatgtaatagttttaggtgcatgtgtg 23640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 601
Target Start/End: Complemental strand, 24484202 - 24484148
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||    
T  24484202 gaccttagaatgta-aataggcttttatgtaatagtcataggtgcatgtgcgcgtg 24484148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 3273819 - 3273876
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 115  Q
    |||||||| |||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  3273819 caaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 3273876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 20022155 - 20022122
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa 20022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 12465425 - 12465324
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  116 at 117  Q
    ||    
T  12465325 at 12465324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 20620173 - 20620274
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  116 at 117  Q
    ||    
T  20620273 at 20620274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 14180563 - 14180465
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaa 14180465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 46386253 - 46386151
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  116 ata 118  Q
    |||    
T  46386153 ata 46386151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 13147637 - 13147536
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  116 at 117  Q
    ||    
T  13147537 at 13147536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 20214034 - 20214135
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  116 at 117  Q
    ||    
T  20214134 at 20214135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 12323095 - 12322994
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  116 at 117  Q
    ||    
T  12322995 at 12322994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 12372161 - 12372262
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  116 at 117  Q
    ||    
T  12372261 at 12372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 8851324 - 8851223
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  116 at 117  Q
    ||    
T  8851224 at 8851223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 16999320 - 16999422
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccc-aaattcccataactacaacctacaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  115 cat 117  Q
    |||    
T  16999420 cat 16999422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 11067355 - 11067456
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  116 at 117  Q
    ||    
T  11067455 at 11067456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 12127328 - 12127227
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  12127328 acataaattctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac 12127229  T
Q  116 at 117  Q
    ||    
T  12127228 at 12127227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 20586239 - 20586340
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || || |||||||||||||||||||||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  116 at 117  Q
    ||    
T  20586339 at 20586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 32433754 - 32433653
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  116 at 117  Q
    ||    
T  32433654 at 32433653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 10277215 - 10277315
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  116 at 117  Q
    ||    
T  10277314 at 10277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 24270112 - 24270037
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaa 91  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaa 24270037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 8911947 - 8911865
Alignment:
Q  479 gatgttagaatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgta 560  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  8911947 gatgttagaatgtaaattaggctttgatgtaaataatttatttacttttcttgtcatttattttctgcagaccttagaatgta 8911865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 12662362 - 12662439
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||| ||||    
T  12662362 aagccaattcatggtcctttaatctatttccttttaagaatttgtattagcctttaaaagaaggagaggaaatcagaa 12662439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 15765488 - 15765390
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||| ||||||||||||||||||||| |||||| ||||| ||| ||||||||||| ||||||||| || |||||||||||||||| |||| || ||||||    
T  15765488 ggatattagaatgtaaattaggttttaatgtaaataattcatt-attttcttgtcatttattttccgcagaccttagaatgtatagtaggcttaatgtaa 15765390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 4892200 - 4892096
Alignment:
Q  502 ttgatgtaattaatttatttattttcttgtcgttta-ttttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcg 599  Q
    ||||||||| |||||||||| |||||||||| |||| ||||| || ||| ||||||||||| ||||| ||||||||||||||||||| |||||| |||||    
T  4892200 ttgatgtaaataatttattt-ttttcttgtcatttacttttccgcagactttagaatgtatcataggcttttatgtaatagtcgtagatgcatgggtgcg 4892102  T
Q  600 tgtgtg 605  Q
    ||||||    
T  4892101 tgtgtg 4892096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 5647879 - 5647744
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta---ttttctgccgaccttagaatgtataatagg-- 567  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||   |||| ||| |||||||||||||| ||||||      
T  5647879 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttatttttttttgcagaccttagaatgta-aataggtt 5647781  T
Q  568 ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||| |||||||||  ||||||||||||||||||||||    
T  5647780 ttttttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 5647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 33002053 - 33002141
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacct 110  Q
    |||||||||| |||||||| |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| |||||||||||    
T  33002053 aattctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aactacaacct 33002141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 15095759 - 15095703
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 15095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 15140143 - 15140199
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaac 15140199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 8135359 - 8135303
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaac 8135303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 13132443 - 13132387
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaac 13132387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 47974944 - 47974889
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctac 47974889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 12557853 - 12557907
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaac 12557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 13698761 - 13698703
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||||||| |||||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacat 13698703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 15623950 - 15624005
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||| | ||||||||||| |||||||||| |||||||| |||||||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaac 15624005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25942358 - 25942401
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaac 59  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  25942358 acatcaattgtacacaaattcaatggattttctactctattaac 25942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 25943041 - 25943084
Alignment:
Q  52 ctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattc 25943084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Complemental strand, 42016416 - 42016362
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  42016416 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgttcgtg 42016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 35771554 - 35771508
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 35771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 41284963 - 41285013
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||||| |||||| |||||||||||||||||||| | ||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaaccta 41285013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 602
Target Start/End: Complemental strand, 19881421 - 19881356
Alignment:
Q  538 ttttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgt 602  Q
    |||| ||| |||| |||||||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  19881421 ttttttgcagaccctagaatgtataataggcttttatgaaatagttttaggtgcatgtgtgcgtgt 19881356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 15685120 - 15685187
Alignment:
Q  534 tttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||  ||| |||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||    
T  15685120 tttatttattgcagaccttagaacgta-aataggcttttatgtaatagtcgtaggtgcatgtctgcgtg 15685187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 597
Target Start/End: Original strand, 15821922 - 15821986
Alignment:
Q  534 tttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    ||||||||  || ||| ||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  15821922 tttatttttcgcagactttagaatgtataataggtttttatgtaatagttttaggtgcatgtgtg 15821986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 48807448 - 48807392
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||   ||| |||||||||||||||| |||||||| |||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaac 48807392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 605
Target Start/End: Complemental strand, 3335275 - 3335220
Alignment:
Q  551 ttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||    
T  3335275 ttagaatgtatcataggcttttatgtaatcgttgtaggggcatgtgtgcgtgtgtg 3335220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Complemental strand, 17014789 - 17014731
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||| ||| |||||||    
T  17014789 gaccttataatgta-aataggcttttatgtaatagtcgtaggtgcatgggtgtgtgtgtg 17014731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 4071759 - 4071805
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||| ||||||||||| ||||| |||| ||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaac 4071805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 14219008 - 14218962
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||| |||||||||||| |||||| || ||||||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaac 14218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 15684941 - 15684983
Alignment:
Q  321 tgcacacccctgaatactgctgca-cccccaccttgtgattga 362  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  15684941 tgcacacccctgaatactgctgcaccccccatcttgtgattga 15684983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 19243038 - 19242988
Alignment:
Q  551 ttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||||||||| || || |||||||| ||||||||||| ||||||    
T  19243038 ttagaatgtataataggcttaatataatagtcttaggtgcatgtctgcgtg 19242988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 36685253 - 36685211
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  36685253 ttcaaaccctaattcccaaatttccaaaactacaacctacaac 36685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 11054642 - 11054699
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||  || ||||||| |||||||||||| || |||||||||||||    
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaac 11054699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 24516073 - 24516174
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  116 at 117  Q
    ||    
T  24516173 at 24516174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 17307373 - 17307474
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  116 at 117  Q
    ||    
T  17307473 at 17307474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 27484642 - 27484541
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  116 at 117  Q
    ||    
T  27484542 at 27484541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 9975816 - 9975917
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  116 at 117  Q
    ||    
T  9975916 at 9975917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 24436535 - 24436636
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  116 at 117  Q
    ||    
T  24436635 at 24436636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 5031297 - 5031193
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  113 aacat 117  Q
    |||||    
T  5031197 aacat 5031193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 24781005 - 24780909
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 24780909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 19201365 - 19201264
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  116 at 117  Q
    ||    
T  19201265 at 19201264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 40912207 - 40912308
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  116 at 117  Q
    ||    
T  40912307 at 40912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 470 - 597
Target Start/End: Complemental strand, 22517624 - 22517494
Alignment:
Q  470 tagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttatt---ttctgccgaccttagaatgtataatag 566  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||   |||||| |||||||||||||| |||||    
T  22517624 tagaccatggatgttagaatgtaaattaggttttgatgtaaataatttatttattttcttgtcatttattttcttctgcagaccttagaatgta-aatag 22517526  T
Q  567 g-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    | ||||||||||||||||||||||||||||||    
T  22517525 gcttttatgtaatagtcgtaggtgcatgtgtg 22517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 36841151 - 36841252
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaac 36841250  T
Q  116 at 117  Q
    ||    
T  36841251 at 36841252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 22251600 - 22251512
Alignment:
Q  29 acaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251600 acaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 22251512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 2523912 - 2523811
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  116 at 117  Q
    ||    
T  2523812 at 2523811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 37270587 - 37270687
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  116 at 117  Q
    ||    
T  37270686 at 37270687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 605
Target Start/End: Original strand, 22935543 - 22935675
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta-ttttctgccgaccttagaatgtataatagg-ttt 570  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| |||| |||| ||| |||||||||||||| |||||| |||    
T  22935543 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttatttttttgcagaccttagaatgta-aataggtttt 22935641  T
Q  571 tatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    | |||||||||  ||||||||||||||||||||||    
T  22935642 tttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 22935675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 605
Target Start/End: Original strand, 22941507 - 22941639
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta-ttttctgccgaccttagaatgtataatagg-ttt 570  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| |||| |||| ||| |||||||||||||| |||||| |||    
T  22941507 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttatttttttgcagaccttagaatgta-aataggtttt 22941605  T
Q  571 tatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    | |||||||||  ||||||||||||||||||||||    
T  22941606 tttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 22941639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 605
Target Start/End: Original strand, 22955402 - 22955534
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta-ttttctgccgaccttagaatgtataatagg-ttt 570  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| |||| |||| ||| |||||||||||||| |||||| |||    
T  22955402 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttatttttttgcagaccttagaatgta-aataggtttt 22955500  T
Q  571 tatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    | |||||||||  ||||||||||||||||||||||    
T  22955501 tttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 22955534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 495 - 602
Target Start/End: Original strand, 29755580 - 29755688
Alignment:
Q  495 ttaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataata-ggttttatgtaatagtcgtaggtgcatg 593  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||| || |||| ||| |||||||||| || ||| ||||||||   ||||||||||    
T  29755580 ttaggctttgatgtaaataatttatttattttcttgtcatttattttccgcagaccatagcatgtataatagggctttttgtaatagctttaggtgcatg 29755679  T
Q  594 tgtgcgtgt 602  Q
    |||||||||    
T  29755680 tgtgcgtgt 29755688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 25142133 - 25142189
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 25142189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 1383667 - 1383612
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctac 1383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 3539766 - 3539822
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaac 3539822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 357809 - 357864
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||||||||||| | | |||||||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctac 357864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 24884399 - 24884453
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 24884453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 29755506 - 29755541
Alignment:
Q  327 cccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||||||||||||||||||||||||||||||    
T  29755506 cccctgaatactgctgcacccccaccttgtgattga 29755541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 19358820 - 19358877
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 19358877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 18388312 - 18388256
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| || ||||||| || | ||||||||||||||||| ||||||||||||||||    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaac 18388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 21065996 - 21066063
Alignment:
Q  534 tttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||  ||| |||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||    
T  21065996 tttatttattgcagaccttagaatgta-aataggcttttatgtaatagccgtaggtgcatgagtgcgtg 21066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 27852605 - 27852653
Alignment:
Q  67 tacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||| |||||||||||||||||| ||| ||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaac 27852653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 605
Target Start/End: Complemental strand, 12369261 - 12369206
Alignment:
Q  551 ttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||||||| ||| | ||||||||||||||||||| |||||| |||||||||||    
T  12369261 ttagaatgtatcataagcttttatgtaatagtcgtagatgcatgggtgcgtgtgtg 12369206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 597
Target Start/End: Complemental strand, 17332347 - 17332297
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  17332347 gaccttagaatgta-aataggcttttgtgtaatagtcgtaggtgcatgtgtg 17332297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 22259974 - 22260024
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||| || ||||||||||||||||| | ||||||||||||||||    
T  22259974 aattacaacttctaagcctaattcccaaattccta-aactacaacctacaac 22260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 18390326 - 18390282
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctaca 113  Q
    ||||||| || ||||||||||||||||||| ||||||||| ||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacataca 18390282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 861 - 760
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  116 at 117  Q
    ||    
T  761 at 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 11439 - 11338
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  116 at 117  Q
    ||    
T  11339 at 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 6e-48; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 7827859 - 7827960
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  116 at 117  Q
    ||    
T  7827959 at 7827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 19655396 - 19655295
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  116 at 117  Q
    ||    
T  19655296 at 19655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 15890877 - 15890776
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  116 at 117  Q
    ||    
T  15890777 at 15890776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 23150452 - 23150351
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  116 at 117  Q
    ||    
T  23150352 at 23150351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 27125642 - 27125541
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  116 at 117  Q
    ||    
T  27125542 at 27125541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 27330131 - 27330045
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27330131 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacat 27330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 27390871 - 27390785
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27390871 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacat 27390785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 18703451 - 18703556
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  112 caacat 117  Q
    ||||||    
T  18703551 caacat 18703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 18709386 - 18709491
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  112 caacat 117  Q
    ||||||    
T  18709486 caacat 18709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 478 - 605
Target Start/End: Original strand, 19170385 - 19170513
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttatttt-ctgccgaccttagaatgtataatagg-ttttatgt 575  Q
    |||| ||||||||||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | || ||| ||||||||||  ||||| ||||||||    
T  19170385 ggatattagaatgtaaattaggctttgatgtaaataatttgttt-ttttcttgtcatttatttttccgcagactttagaatgtaccataggcttttatgt 19170483  T
Q  576 aatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||||||||||||||||||||||||||    
T  19170484 aatagtcgtaggtgcatgtgtgcgtgtgtg 19170513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 483 - 597
Target Start/End: Complemental strand, 20047391 - 20047276
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttatttt-cttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatag 580  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||| |||||||||||||    
T  20047391 ttagaatgtacaataggcattgatgtaaataatttatttatttttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaatag 20047293  T
Q  581 tcgtaggtgcatgtgtg 597  Q
    |||||||||||||||||    
T  20047292 tcgtaggtgcatgtgtg 20047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 483 - 597
Target Start/End: Complemental strand, 20039584 - 20039469
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttatttt-cttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaatagt 581  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||| | | | ||||||||||||||    
T  20039584 ttagaatgtacaataggcattgatgtaaataatttatttatttttcttgtcatttattttctgcagaccttagaatgtaaattggcttttatgtaatagt 20039485  T
Q  582 cgtaggtgcatgtgtg 597  Q
    ||||||||||||||||    
T  20039484 cgtaggtgcatgtgtg 20039469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 13826181 - 13826258
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13826181 aagccaattcatggtcctttaatttatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 13826258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 19167998 - 19167926
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19167998 caattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaa 19167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 14474073 - 14474152
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgag 201  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||| |||| ||||    
T  14474073 ccaattcatggtcctttaatctatttccttttaagaatttgtttcagcctttaaaagaaagagaggaaatcagaagtgag 14474152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 24142325 - 24142192
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta--ttttctgccgaccttagaatgtataatagg-tt 569  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||  |||| ||| |||||||||||||| |||||| ||    
T  24142325 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttattttttttgcagaccttagaatgta-aataggttt 24142227  T
Q  570 ttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    || |||||||||  ||||||||||||||||||||||    
T  24142226 ttttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 24142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 24148815 - 24148682
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta--ttttctgccgaccttagaatgtataatagg-tt 569  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||  |||| ||| |||||||||||||| |||||| ||    
T  24148815 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttattttttttgcagaccttagaatgta-aataggttt 24148717  T
Q  570 ttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    || |||||||||  ||||||||||||||||||||||    
T  24148716 ttttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 24148682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 1550887 - 1550985
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||| ||||||||||||||||||||| |||||| ||||| ||| ||||||||||| ||||||||| || |||||||||||||||| |||| || ||||||    
T  1550887 ggatattagaatgtaaattaggttttaatgtaaataattcatt-attttcttgtcatttattttccgcagaccttagaatgtatagtaggcttaatgtaa 1550985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 19235015 - 19235089
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  19235015 caattgtacacaagttcaatggattttctactttattaacaaccaattacgacttcaaaacctaa-tcccaaattc 19235089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 30673556 - 30673480
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattc 95  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  30673556 caattgtacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattc 30673480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 28948466 - 28948539
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    |||||||||| ||||||||  |||||||||| |   ||||||||||||||||||| ||||||||||||||||||    
T  28948466 aattctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatt 28948539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 18585733 - 18585788
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctac 18585788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 22073369 - 22073423
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  22073369 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 22073423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 18928614 - 18928666
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 18928666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 19401028 - 19401080
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaac 19401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 597
Target Start/End: Complemental strand, 15665020 - 15664970
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  15665020 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtg 15664970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 18259328 - 18259262
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattcccaa 18259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 21962711 - 21962752
Alignment:
Q  320 atgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21962711 atgcacacccctgaatactgctgca-ccccaccttgtgattga 21962752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 23501601 - 23501658
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa-ttcccataactacaacctacaac 115  Q
    |||| |||||||||||| |||||||||||||||| |||| | ||||||||||||||||    
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaac 23501658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 24267801 - 24267837
Alignment:
Q  81 ctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||| |||||||||||||||||||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacat 24267837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 6e-48; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 19676598 - 19676699
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  116 at 117  Q
    ||    
T  19676698 at 19676699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21046214 - 21046113
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  116 at 117  Q
    ||    
T  21046114 at 21046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 42912936 - 42913037
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  116 at 117  Q
    ||    
T  42913036 at 42913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 16058478 - 16058378
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttc-aaacctaattcccaaatttccataactacaacctacaac 16058380  T
Q  116 at 117  Q
    ||    
T  16058379 at 16058378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 20633799 - 20633695
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattccc---ataactacaacctac 112  Q
    ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  113 aacat 117  Q
    |||||    
T  20633699 aacat 20633695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 45497278 - 45497363
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggac 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  45497278 aagccaattcatggtcctttaatctatttccttttaagaatttgcatcagcctttaaaagaaaaagaggaaatcagaactgaggac 45497363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 51324396 - 51324487
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||| |||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||    
T  51324396 aattctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctac 51324487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 44822145 - 44822090
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaacctac 44822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 20519661 - 20519718
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgt 604  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  20519661 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtgtgt 20519718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 6196622 - 6196550
Alignment:
Q  530 gtcgtttattttct-gccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| || || |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  6196622 gtcgtttatttcctcgcagaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 6196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 601
Target Start/End: Complemental strand, 6204529 - 6204401
Alignment:
Q  469 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttct-gccgaccttagaatgtataatagg 567  Q
    ||||| || |||| ||||||||||| |||||| || |||||| ||||||   ||||| |  ||| ||||||| || || |||||||||||||| ||||||    
T  6204529 ctagagcaaggatattagaatgtaatttaggtcttcatgtaaataattt---tatttcc--gtcttttatttcctcgcagaccttagaatgta-aatagg 6204436  T
Q  568 -ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
     ||||||||||||||||||||||||||||||||||    
T  6204435 cttttatgtaatagtcgtaggtgcatgtgtgcgtg 6204401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 478 - 605
Target Start/End: Original strand, 16886170 - 16886297
Alignment:
Q  478 ggatgttagaatgtaaattaggt-tttgatgtaattaatttatttattttcttgtcgtttattttct-gccgaccttagaatgtataataggttttatgt 575  Q
    |||||| |||||||||||||||  |||||||||| ||||||||||  ||||  ||| |||| ||||| || |||| ||  |||||||||||||||| |||    
T  16886170 ggatgtaagaatgtaaattagggctttgatgtaaataatttattttatttcc-gtcatttactttctcgcagaccataacatgtataataggttttttgt 16886268  T
Q  576 aatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||  | ||||||||||||||||||||||    
T  16886269 aataa-cttaggtgcatgtgtgcgtgtgtg 16886297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 7320716 - 7320660
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||||| |||||||    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaac 7320660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 22350646 - 22350702
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 22350702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 21168825 - 21168899
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||| ||||||||||||| ||||||||||||||||||| || |||  || | |||||||||| ||||||||||||    
T  21168825 caattgtacacaaattcaatggattttctactctattaa-aaacaaaaactaattcaaaaccttattcccaaattc 21168899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 13302849 - 13302887
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaac 13302887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 6196814 - 6196774
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6196814 tgcacacccctgaatactgctgca-ccccaccttgtgattga 6196774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 6204665 - 6204625
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6204665 tgcacacccctgaatactgctgca-ccccaccttgtgattga 6204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 591
Target Start/End: Original strand, 39455679 - 39455770
Alignment:
Q  502 ttgatgtaattaatttatttattttcttgtcgtttatttt-ctgccgaccttagaatgtataatagg--ttttatgtaatagtcgtaggtgca 591  Q
    ||||||||| ||||||||||  ||| ||||| |||||||| | || ||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  39455679 ttgatgtaaataatttattttcttt-ttgtcatttatttttccgcagactttagaatgtatcataggccttttatgtaatagtcgtaggtgca 39455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 24723475 - 24723420
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||| |||||| |||||| ||| |||||||| ||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctac 24723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 45498412 - 45498463
Alignment:
Q  551 ttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| ||||| ||||||||||||| | ||||||||||||||||||    
T  45498412 ttagaatgtatcataggcttttatgtaatagccataggtgcatgtgtgcgtg 45498463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 7052046 - 7052009
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatt 7052009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 38056795 - 38056762
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 4595995 - 4595935
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 92  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||| ||||||||||||    
T  4595995 aattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaa 4595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 633 - 532
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  116 at 117  Q
    ||    
T  533 at 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 4879 - 4778
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  116 at 117  Q
    ||    
T  4779 at 4778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 1052 - 1153
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  116 at 117  Q
    ||    
T  1152 at 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 405 - 506
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  116 at 117  Q
    ||    
T  505 at 506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 13557 - 13456
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  116 at 117  Q
    ||    
T  13457 at 13456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 5270 - 5371
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  116 at 117  Q
    ||    
T  5370 at 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 12693 - 12597
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12693 aattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacat 12597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 58633 - 58734
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  116 at 117  Q
    ||    
T  58733 at 58734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 8114 - 8078
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtg 357  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  8114 tgcacacccctgaacactactgcacccccaccttgtg 8078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 146610 - 146711
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  116 at 117  Q
    ||    
T  146710 at 146711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 169164 - 169063
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  116 at 117  Q
    ||    
T  169064 at 169063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 143498 - 143599
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  116 at 117  Q
    ||    
T  143598 at 143599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 1092 - 1193
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  116 at 117  Q
    ||    
T  1192 at 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 34226 - 34327
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  116 at 117  Q
    ||    
T  34326 at 34327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 77574 - 77675
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  116 at 117  Q
    ||    
T  77674 at 77675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 31881 - 31982
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  116 at 117  Q
    ||    
T  31981 at 31982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 37188 - 37289
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  116 at 117  Q
    ||    
T  37288 at 37289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21958 - 21857
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  116 at 117  Q
    ||    
T  21858 at 21857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 478 - 607
Target Start/End: Original strand, 57107 - 57236
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||||||| ||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||    
T  57107 ggatgttataatgtaaattaggctttgatgtaaataatttatttgttttcttgtcatttattttctgcagacattagaatgcataataggttttatgtaa 57206  T
Q  578 tagtcgtaggtgcatgtgtgcgtgtgtgcg 607  Q
    |||   ||||||||||||||||||||||||    
T  57207 tagctttaggtgcatgtgtgcgtgtgtgcg 57236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 56947 - 56988
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  56947 tgcacacccttgaatgctgctgcacccccaccttgtgattga 56988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 8e-41; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21300209 - 21300108
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  116 at 117  Q
    ||    
T  21300109 at 21300108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 19921525 - 19921626
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  116 at 117  Q
    ||    
T  19921625 at 19921626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 7484903 - 7484990
Alignment:
Q  30 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7484903 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacat 7484990  T

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Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 22961514 - 22961437
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22961514 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 22961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 20566445 - 20566515
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccca 90  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20566445 caattctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaattccca 20566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 483 - 597
Target Start/End: Complemental strand, 25449276 - 25449161
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattt--tcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaata 579  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  25449276 ttagaatgtacaataggcattgatgtaaataatttatttatttcttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaata 25449178  T
Q  580 gtcgtaggtgcatgtgtg 597  Q
    || |||||||||||||||    
T  25449177 gt-gtaggtgcatgtgtg 25449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 31622028 - 31622090
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31622028 aattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 31622090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 23576130 - 23576002
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg---ttttat 573  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||| |||||||  ||||||| ||||| ||||||   |||| |    
T  23576130 ggatgttagaatgtaaattaggctttgatgtaaataatttatttacttttcttgtcattta-tttctgcataccttaggatgta-aataggttttttttt 23576033  T
Q  574 gtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||||  ||||||||||||||||||||||    
T  23576032 gtaatagt-ttaggtgcatgtgtgcgtgtgtg 23576002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 26547221 - 26547088
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta--ttttcttgtcgttta--ttttctgccgaccttagaatgtataatagg-tt 569  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||||||  |||||||||| ||||  |||| ||| |||||||||||||| |||||| ||    
T  26547221 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttactttttcttgtcatttattttttttgcagaccttagaatgta-aataggttt 26547123  T
Q  570 ttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    || |||||||||  ||||||||||||||||||||||    
T  26547122 ttttgtaatagt-ttaggtgcatgtgtgcgtgtgtg 26547088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 31456888 - 31456943
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctac 31456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 36508757 - 36508702
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctac 36508702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 17876132 - 17876186
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 17876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 561
Target Start/End: Original strand, 29902598 - 29902676
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtat 561  Q
    |||||||| |||||| | |||||||||| ||||| |||||| |||||||| |||||||||||| |||| ||| ||||||    
T  29902598 ttagaatgcaaattaagctttgatgtaaataattcatttatattcttgtcatttattttctgcagaccatagcatgtat 29902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 21405751 - 21405694
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 21405694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 22111715 - 22111764
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaa 77  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  22111715 cacaaattcattggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 607
Target Start/End: Complemental strand, 33313272 - 33313153
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttct-gccgaccttagaatgtataataggttttatgtaatagt 581  Q
    ||||||||||||||||||||  |||||| |    ||||||||| |  ||| |||| ||||| || |||| ||| |||||| |||||||| ||||||||||    
T  33313272 ttagaatgtaaattaggtttaaatgtaaat----tatttatttcc--gtcatttactttctcgcagaccatagcatgtatcataggtttaatgtaatagt 33313179  T
Q  582 cgtaggtgcatgtgtgcgtgtgtgcg 607  Q
      |||||||||||||||||| |||||    
T  33313178 tttaggtgcatgtgtgcgtgcgtgcg 33313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 21618047 - 21617995
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||| ||||||| || |||||||| |||||||||| ||||||||||||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaac 21617995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 30138098 - 30138059
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcc 96  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaatttcc 30138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 31252011 - 31251961
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||||| |||||| ||||||||||| |||||||| | ||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaaccta 31251961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 328455 - 328354
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  116 at 117  Q
    ||    
T  328355 at 328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 72841 - 72910
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattc 72910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 75691 - 75752
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||||| |||||||||| ||||||||||||||||||      |||||||||||||||||||||    
T  75691 cacaaattcaatggattttctattctattaacaaccaatta------caaaacctaattcccaaattc 75752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 1e-30; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 475 - 601
Target Start/End: Original strand, 297987 - 298113
Alignment:
Q  475 catggatgttagaatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-tttta 572  Q
    |||| ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| |||||| ||||     
T  297987 catgcatgttagaatgtaaattaggccttgatgtaaataatttatttacttttcttgtcatttattttctgcagaccttagaatgta-aataggtttttt 298085  T
Q  573 tgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||| |||||||||||||||||||    
T  298086 tgtaatagt-gtaggtgcatgtgtgcgtg 298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 121707 - 121784
Alignment:
Q  119 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  121707 aagccaattcatggtcctttaatctatttccttttaagaatttgtgtcagcctttaaaagaaaaagaggaaatcagaa 121784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 523 - 601
Target Start/End: Original strand, 122720 - 122799
Alignment:
Q  523 ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||| ||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  122720 ttttcttgtcatttattttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 122799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 601
Target Start/End: Complemental strand, 361504 - 361472
Alignment:
Q  569 tttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||||||||||||||||||||||    
T  361504 tttatgtaatagtcgtaggtgcatgtgtgcgtg 361472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 19652 - 19727
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19652 caattctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 22182 - 22055
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgt 575  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| |||||| |||| |||    
T  22182 ggatgttagaatgtaaattaggctttgatgtaaataatttatttacttttcttgtcatttattttctgcagaccttagaatgta-aataggattttttgt 22084  T
Q  576 aatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||  |||||||||| ||| |||||||    
T  22083 aatagt-ttaggtgcatgggtgtgtgtgtg 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 78955 - 79025
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccca 90  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  78955 caattctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattccca 79025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 6755 - 6628
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttattta-ttttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgt 575  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||| |||||||||||| |||||||||||||| |||||| |||| |||    
T  6755 ggatgttagaatgtaaattaggctttgatgtaaataatttacttacttttcttgtcatttattttctgcagaccttagaatgta-aataggattttttgt 6657  T
Q  576 aatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||  |||||||||| ||| |||||||    
T  6656 aatagt-ttaggtgcatgggtgtgtgtgtg 6628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 29711 - 29637
Alignment:
Q  42 attttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacat 29637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 21539 - 21594
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||| ||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctac 21594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1855 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1855
Description:

Target: scaffold1855; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 483 - 597
Target Start/End: Original strand, 743 - 858
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttatttt-cttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatag 580  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||| |||||||||||||    
T  743 ttagaatgtacaataggcattgatgtaaataatttatttatttttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaatag 841  T
Q  581 tcgtaggtgcatgtgtg 597  Q
    |||||| ||||| ||||    
T  842 tcgtagatgcatatgtg 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 483 - 593
Target Start/End: Complemental strand, 27792 - 27681
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttatttt-cttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaatag 580  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||| |||| |||||| |||||||||||||    
T  27792 ttagaatgtacaataggcattgatgtaaataatttatttatttttcttgtcatttattttctgcagaccttagagtgta-aataggcttttatgtaatag 27694  T
Q  581 tcgtaggtgcatg 593  Q
    |||||||||||||    
T  27693 tcgtaggtgcatg 27681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 483 - 597
Target Start/End: Original strand, 535 - 650
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattt--tcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaata 579  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  535 ttagaatgtacaataggcattgatgtaaataatttatttatttcttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaata 633  T
Q  580 gtcgtaggtgcatgtgtg 597  Q
    || |||||||||||||||    
T  634 gt-gtaggtgcatgtgtg 650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 483 - 597
Target Start/End: Original strand, 1132 - 1247
Alignment:
Q  483 ttagaatgtaaattaggttttgatgtaattaatttatttattt--tcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaata 579  Q
    |||||||||| | ||||  ||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  1132 ttagaatgtacaataggcattgatgtaaataatttatttatttcttcttgtcatttattttctgcagaccttagaatgta-aataggcttttatgtaata 1230  T
Q  580 gtcgtaggtgcatgtgtg 597  Q
    || |||||||||||||||    
T  1231 gt-gtaggtgcatgtgtg 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 3e-22; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 113127 - 113034
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||| ||||||||  |||||||||| | | ||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  113127 aattctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaac 113034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 81501 - 81553
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 81553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 117960 - 117890
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 92  Q
    |||||||| | |||||||  ||||||||||| | | ||||||||||||||||||| ||||||||||||||||    
T  117960 aattctacgccaattcaatagattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaa 117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 577
Target Start/End: Complemental strand, 77614 - 77545
Alignment:
Q  506 tgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    ||||| ||||||||||  ||||||||| ||||||||| |  |||||||||||||||| |||| || ||||||    
T  77614 tgtaaataatttattt--tttcttgtcatttattttccgtagaccttagaatgtatagtaggcttaatgtaa 77545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1904 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1904
Description:

Target: scaffold1904; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 36 - 93
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1312 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1312
Description:

Target: scaffold1312; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 2018 - 2075
Alignment:
Q  122 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 179  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2018 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 11287 - 11356
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11287 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattc 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 5167 - 5236
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5167 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattc 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 19605 - 19672
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||| |||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattc 19672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 3950 - 3832
Alignment:
Q  480 atgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataatagg-ttttatgtaat 578  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||   |||||||| ||||||||| || ||| ||||||||||| ||||| |||| ||||||    
T  3950 atgttagaatgtaaactaggctta-atgtaaataatttattt---ttcttgtcatttattttccgcagactttagaatgtatcataggcttttttgtaat 3855  T
Q  579 agtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||||||||||||    
T  3854 agtcgtaggtgcatgtgtgcgtg 3832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 478 - 605
Target Start/End: Complemental strand, 598 - 476
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataatagg--ttttatgt 575  Q
    |||||||||||||||| ||||| |||||||||| |||||||     ||||||||| |||||||||||| |||||||||||||| ||||||  |||| |||    
T  598 ggatgttagaatgtaagttaggctttgatgtaaataattta-----tttcttgtcatttattttctgcagaccttagaatgta-aataggatttttttgt 505  T
Q  576 aatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||||  |||||||||| |||||||||||    
T  504 aatagt-ttaggtgcatgggtgcgtgtgtg 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 737 - 699
Alignment:
Q  324 acacccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  737 acactcctgaatgctgctgcacccccaccttgtgattga 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1796 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold1796
Description:

Target: scaffold1796; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 431 - 529
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||| ||||||||||||||| ||||| |||||| | ||||||| ||||||||||| ||||||||| || |||||||||||||||| |||| || ||||||    
T  431 ggatattagaatgtaaattaagttttaatgtaaatgatttatt-attttcttgtcatttattttccgcagaccttagaatgtatagtaggcttaatgtaa 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1796; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 358
Target Start/End: Original strand, 280 - 315
Alignment:
Q  323 cacacccctgaatactgctgcacccccaccttgtga 358  Q
    ||||||||||||||||||||||||||||||||||||    
T  280 cacacccctgaatactgctgcacccccaccttgtga 315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 1663 - 1568
Alignment:
Q  478 ggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||    ||||||| ||||||||| || |||||||||||||||| |||| || ||||||    
T  1663 ggatattagaatgtaaattaggttttaatgtaaataatttattt----tcttgtcatttattttccgcagaccttagaatgtatagtaggcttaatgtaa 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 1833 - 1797
Alignment:
Q  326 acccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  1833 acccctggatactgctgcacccctaccttgtgattga 1797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 6686 - 6620
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6686 cacaaattcattggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 26779 - 26713
Alignment:
Q  30 caaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  26779 caaattcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattc 26713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 78298 - 78249
Alignment:
Q  68 acaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacat 78249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 2787 - 2863
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattc 95  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||    
T  2787 caattatacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattc 2863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 534 - 605
Target Start/End: Complemental strand, 39750 - 39679
Alignment:
Q  534 tttattttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||  ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  39750 tttatttattgcagaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 605
Target Start/End: Original strand, 2271 - 2329
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  2271 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 2062 - 2104
Alignment:
Q  321 tgcacacccctgaatactgctgca-cccccaccttgtgattga 362  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  2062 tgcacacccctgaatgctgctgcaccccccaccttgtgattga 2104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 35418 - 35478
Alignment:
Q  55 ttaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaact--aacctacaacat 35478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 602
Target Start/End: Complemental strand, 43181 - 43126
Alignment:
Q  547 gaccttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtgt 602  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  43181 gaccttagaatgtataataggttttatgtaatagctttaggtgcatgtgtgcgtgt 43126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 43418 - 43382
Alignment:
Q  326 acccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||||||||||| ||||||||||||||||||||||    
T  43418 acccctgaatactgttgcacccccaccttgtgattga 43382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 2143 - 2085
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacat 2085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 601
Target Start/End: Complemental strand, 15513 - 15385
Alignment:
Q  469 ctagaacatggatgttagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttct-gccgaccttagaatgtataatagg 567  Q
    ||||| || |||| ||||||||||| |||||| || |||||| ||||||   ||||| |  ||||||||||  || || |||||||||||||| ||||||    
T  15513 ctagagcaaggatattagaatgtaatttaggtcttaatgtaaataattt---tatttcc--gtcgtttattccctcgcagaccttagaatgta-aatagg 15420  T
Q  568 -ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
     ||||||||||||||||||||||||||||||||||    
T  15419 cttttatgtaatagtcgtaggtgcatgtgtgcgtg 15385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 600 - 532
Alignment:
Q  538 ttttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||| || ||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  600 ttttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgggtgcgtgtgtg 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 5167 - 5099
Alignment:
Q  538 ttttctgccgaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    ||||| || ||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  5167 ttttccgcagactttagaatgtatcataggcttttatgtaatagtcgtaggtgcatgggtgcgtgtgtg 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 16532 - 16592
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacat 16592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 3174 - 3118
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaac 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 6809 - 6754
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctac 6754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 10913 - 10821
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||| |||||||  |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||    
T  10913 aattctacaccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaac 10821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 12323 - 12380
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||| ||||||||||| |||||| ||| ||||||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaac 12380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 8571 - 8628
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||    
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaac 8628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 18744 - 18810
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | ||||||||||||||||||    
T  18744 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaa 18810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 158949 - 158888
Alignment:
Q  54 attaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||| |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 577
Target Start/End: Complemental strand, 13350 - 13261
Alignment:
Q  484 tagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtataataggttttatgtaa 577  Q
    |||||||||||||||| |||||||||| ||     |||||||| ||||| |||||||||||| |||||||||||||| | |||| || ||||||    
T  13350 tagaatgtaaattaggctttgatgtaaata----ttttatttttttgtcatttattttctgcagaccttagaatgtaaactaggcttaatgtaa 13261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 13504 - 13469
Alignment:
Q  327 cccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||| ||||||||||||||||||||||||||    
T  13504 cccctgaatgctgctgcacccccaccttgtgattga 13469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 551 - 599
Target Start/End: Original strand, 22300 - 22348
Alignment:
Q  551 ttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcg 599  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  22300 ttagaatgtataataggcttaatgtaatagtcttaggtgcatgtgtgcg 22348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 562
Target Start/End: Complemental strand, 35598 - 35523
Alignment:
Q  484 tagaatgtaaattaggttttgatgtaattaatttatttattttcttgtcgtttattttctgccgaccttagaatgtata 562  Q
    ||||||||||| |||| ||| |||||| ||||||||||   || ||||| |||||||||||| ||||||||||||||||    
T  35598 tagaatgtaaactaggctttaatgtaaataatttattt---ttattgtcatttattttctgcagaccttagaatgtata 35523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 12396 - 12446
Alignment:
Q  551 ttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  12396 ttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtgcgtg 12446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000006; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 14770 - 14824
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  14770 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtacatgtgtgcgtg 14824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 601
Target Start/End: Original strand, 14993 - 15044
Alignment:
Q  550 cttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  14993 cttagaatgta-aataggcttttatgtaatagtcgtaggtacatgtgtgcgtg 15044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 601
Target Start/End: Original strand, 15063 - 15114
Alignment:
Q  550 cttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  15063 cttagaatgta-aataggcttttatgtaatagtcgtaggtacatgtgtgcgtg 15114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 601
Target Start/End: Original strand, 14845 - 14896
Alignment:
Q  550 cttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtg 601  Q
    ||||||||||| |  || ||||||||||||||||||||| ||||||||||||    
T  14845 cttagaatgtaaataagcttttatgtaatagtcgtaggtacatgtgtgcgtg 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 597
Target Start/End: Original strand, 5082 - 5132
Alignment:
Q  547 gaccttagaatgtataatagg-ttttatgtaatagtcgtaggtgcatgtgtg 597  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  5082 gaccttagaatgta-aataggcttttatgtaatagtcgtaggtgcatgtgtg 5132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 135625 - 135570
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||| ||||||| ||  |||||||||||||||||| ||||||||||||||||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaac 135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 3921 - 3881
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  3921 tgcacacccctgaatactgctgca-ccccaccttgtgattga 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 106175 - 106126
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 106  Q
    |||||||||||||||| || |||||||||||||||||| ||| |||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactaca 106126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 4612 - 4664
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||| |||||||||||| ||||||||||| |||||||||| ||| ||||||||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaaccta 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 28451 - 28395
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| || ||||||| || ||||||| ||||||||||| ||||||||||||||||    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaac 28395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 95
Target Start/End: Original strand, 10741 - 10772
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||||||||||||||||||||||||||    
T  10741 aattacaacttcaaaacctaattcccaaattc 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 20202 - 20152
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaac 20152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 7205 - 7264
Alignment:
Q  59 caaccaattacaacttcaaaacctaattc-ccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||| || |||||||  ||||||||||| ||||| ||||||||||||    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacat 7264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 35586 - 35531
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaa 114  Q
    |||||| || ||||||| || | ||||||||||||||||| |||||||||||||||    
T  35586 caaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaa 35531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 1226 - 1125
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| | |||||||  |||||||| ||||| |||||||   | |||| |||||||||||| || ||||| |||||||||| || |||| ||||||||    
T  1226 tggacattatttctacatcaattcaacagattt-ctactcttaaatcaactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctac 1128  T
Q  113 aac 115  Q
    |||    
T  1127 aac 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 9004 - 9046
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||| | ||||||||||||||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaac 9046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 605
Target Start/End: Complemental strand, 7037 - 6980
Alignment:
Q  547 gaccttagaatgtataataggttttatgtaatagtcgtaggtgcatgtgtgcgtgtgtg 605  Q
    |||| ||| |||||||||||||||| |||||||  | ||||||||||||||||||||||    
T  7037 gaccatagcatgtataataggttttttgtaataa-cttaggtgcatgtgtgcgtgtgtg 6980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 591
Target Start/End: Complemental strand, 8038 - 7947
Alignment:
Q  502 ttgatgtaattaatttatttattttcttgtcgtttatttt-ctgccgaccttagaatgtataataggt--tttatgtaatagtcgtaggtgca 591  Q
    ||||||||| ||||||||||  ||| ||||| |||||||| | || ||| ||||||||||| |||||   |||||||||||||||||||||||    
T  8038 ttgatgtaaataatttattttcttt-ttgtcatttatttttccgcagactttagaatgtatcataggccatttatgtaatagtcgtaggtgca 7947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

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Target: scaffold0182 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 6508 - 6548
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  6508 tgcacacccttgaatactgctgca-ccccaccttgtgattga 6548  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 31046 - 31094
Alignment:
Q  66 ttacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||||    
T  31046 ttacaacttttaaccctaattcccaaattccca-aactacaacctacaac 31094  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 67060 - 67105
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaa 114  Q
    ||||||| |||||| ||||||||||||| | |||||||||||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaa 67105  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 5356 - 5324
Alignment:
Q  330 ctgaatactgctgcacccccaccttgtgattga 362  Q
    ||||||||||||||||||| |||||||||||||    
T  5356 ctgaatactgctgcacccctaccttgtgattga 5324  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 13370 - 13426
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| || ||||||  || ||||||||||||||||||| |||| |||||||||||    
T  13370 caaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaac 13426  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 201579 - 201543
Alignment:
Q  321 tgcacacccctgaatactgctgcacccccaccttgtg 357  Q
    ||||||||||  |||||||||||||||||||||||||    
T  201579 tgcacaccccataatactgctgcacccccaccttgtg 201543  T

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