View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7336_high_9 (Length: 284)
Name: NF7336_high_9
Description: NF7336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7336_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 33841930 - 33841687
Alignment:
| Q |
18 |
aacacttgaacttgaaacaattcaagattgacacacaagaatctttaattatattgtaaaaaattaacattctttttgaatgggttgaatatacgggttt |
117 |
Q |
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| T |
33841930 |
aacacttaaacttgaaacaattcaagattgacacacaagaatctttaattatattgtaaaaaattaacattctttttgaatgggttgaatatacgggttt |
33841831 |
T |
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| Q |
118 |
acgagttgaaaatcataaacttgttacttgaacataccacttatgaattgaaggatttgattcaaattggacacaaacttgaactagtcactcgaagtca |
217 |
Q |
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| T |
33841830 |
acgagttgaaaatcataaacttgttacttgaacataccacttatgaattgaaggatttgattcaaattggacacaaacttgaactagtcactcgaagtca |
33841731 |
T |
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| Q |
218 |
tgaacactcgtacttacatatagttttggggtaggttcttaatttc |
263 |
Q |
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| T |
33841730 |
tgaacactcatacttgc--atagttttggtgtaatttcttaatttc |
33841687 |
T |
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