View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7337_high_36 (Length: 435)

Name: NF7337_high_36
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7337_high_36
NF7337_high_36
[»] chr4 (44 HSPs)
chr4 (18-303)||(50374085-50374370)
chr4 (297-376)||(6923125-6923204)
chr4 (299-429)||(19525842-19525976)
chr4 (297-376)||(25644356-25644435)
chr4 (300-424)||(50033020-50033148)
chr4 (300-429)||(19731294-19731426)
chr4 (300-424)||(50035539-50035667)
chr4 (299-429)||(26659839-26659972)
chr4 (296-429)||(4209359-4209495)
chr4 (300-376)||(19631308-19631384)
chr4 (298-429)||(39786485-39786619)
chr4 (296-376)||(4264130-4264210)
chr4 (300-376)||(5735271-5735347)
chr4 (300-376)||(19634033-19634109)
chr4 (300-376)||(28166274-28166350)
chr4 (300-376)||(45198525-45198601)
chr4 (319-429)||(7738947-7739061)
chr4 (300-423)||(51737088-51737214)
chr4 (322-376)||(5123342-5123396)
chr4 (300-421)||(47579287-47579411)
chr4 (299-376)||(53568353-53568430)
chr4 (300-376)||(3442529-3442605)
chr4 (300-376)||(3901324-3901400)
chr4 (300-376)||(26205889-26205965)
chr4 (322-429)||(42187107-42187218)
chr4 (300-376)||(46212535-46212611)
chr4 (300-376)||(46803631-46803707)
chr4 (323-429)||(3443515-3443625)
chr4 (322-429)||(19652384-19652494)
chr4 (322-429)||(39260260-39260370)
chr4 (328-375)||(55014290-55014337)
chr4 (328-429)||(19170667-19170772)
chr4 (319-376)||(1377051-1377108)
chr4 (319-376)||(37688218-37688275)
chr4 (327-376)||(55997141-55997190)
chr4 (328-376)||(18360158-18360206)
chr4 (328-376)||(23603832-23603880)
chr4 (328-376)||(36602722-36602770)
chr4 (328-376)||(55190899-55190947)
chr4 (302-376)||(49768447-49768521)
chr4 (299-376)||(23255934-23256011)
chr4 (300-376)||(5744268-5744344)
chr4 (328-387)||(21859090-21859152)
chr4 (328-387)||(21914953-21915015)
[»] chr5 (36 HSPs)
chr5 (297-423)||(4299967-4300096)
chr5 (297-429)||(970135-970271)
chr5 (297-429)||(43067226-43067362)
chr5 (297-429)||(39405761-39405897)
chr5 (297-376)||(16048080-16048159)
chr5 (297-429)||(22613837-22613973)
chr5 (300-429)||(19889654-19889786)
chr5 (300-417)||(42421685-42421805)
chr5 (300-376)||(41411343-41411419)
chr5 (298-376)||(15268108-15268186)
chr5 (299-376)||(1830653-1830730)
chr5 (328-429)||(19868814-19868918)
chr5 (300-376)||(40316121-40316197)
chr5 (299-376)||(37516143-37516220)
chr5 (299-376)||(42148306-42148383)
chr5 (328-424)||(30779879-30779978)
chr5 (300-429)||(39036410-39036543)
chr5 (299-376)||(23988578-23988655)
chr5 (315-376)||(25563515-25563576)
chr5 (328-376)||(14475419-14475467)
chr5 (300-376)||(35448182-35448258)
chr5 (339-429)||(4924966-4925060)
chr5 (297-376)||(32334825-32334904)
chr5 (328-429)||(5213050-5213155)
chr5 (328-429)||(35290314-35290419)
chr5 (328-429)||(37843703-37843808)
chr5 (328-429)||(43517188-43517293)
chr5 (328-387)||(5364448-5364510)
chr5 (300-376)||(29627268-29627344)
chr5 (300-376)||(38697963-38698039)
chr5 (300-376)||(39894781-39894857)
chr5 (328-376)||(40512865-40512913)
chr5 (395-429)||(2864053-2864087)
chr5 (315-376)||(19087955-19088016)
chr5 (319-376)||(32002199-32002256)
chr5 (397-429)||(16048186-16048218)
[»] chr1 (33 HSPs)
chr1 (297-429)||(16265030-16265166)
chr1 (297-429)||(24982348-24982484)
chr1 (297-429)||(16266159-16266295)
chr1 (297-429)||(26441634-26441770)
chr1 (297-429)||(43680066-43680203)
chr1 (297-429)||(3898699-3898835)
chr1 (294-424)||(23569807-23569941)
chr1 (300-418)||(50481278-50481399)
chr1 (300-429)||(16751581-16751714)
chr1 (300-423)||(3529176-3529303)
chr1 (300-376)||(47222214-47222290)
chr1 (300-375)||(38738164-38738239)
chr1 (322-376)||(4605020-4605074)
chr1 (299-376)||(32988534-32988611)
chr1 (300-376)||(50539260-50539336)
chr1 (300-376)||(52378989-52379065)
chr1 (299-429)||(25531777-25531911)
chr1 (305-376)||(45235030-45235101)
chr1 (319-376)||(29161861-29161918)
chr1 (319-376)||(42708523-42708580)
chr1 (295-376)||(48219827-48219908)
chr1 (322-429)||(31971515-31971626)
chr1 (322-429)||(32565768-32565879)
chr1 (328-376)||(48376186-48376234)
chr1 (296-376)||(49805437-49805517)
chr1 (306-376)||(21034715-21034785)
chr1 (298-376)||(48264996-48265074)
chr1 (319-376)||(39354449-39354506)
chr1 (300-376)||(30529235-30529311)
chr1 (341-387)||(41501779-41501828)
chr1 (298-376)||(50876362-50876440)
chr1 (339-376)||(38458768-38458805)
chr1 (300-376)||(23330452-23330528)
[»] chr7 (25 HSPs)
chr7 (297-429)||(37231691-37231828)
chr7 (297-429)||(10464243-10464379)
chr7 (297-429)||(35500875-35501011)
chr7 (300-429)||(34478139-34478272)
chr7 (297-423)||(36643159-36643289)
chr7 (299-429)||(31497832-31497965)
chr7 (298-376)||(36905524-36905602)
chr7 (322-429)||(21392040-21392151)
chr7 (296-376)||(19072765-19072845)
chr7 (328-376)||(31466543-31466591)
chr7 (300-376)||(36819696-36819772)
chr7 (322-429)||(48531344-48531455)
chr7 (328-424)||(23474102-23474202)
chr7 (303-376)||(29770659-29770732)
chr7 (319-376)||(42086823-42086880)
chr7 (299-376)||(47080979-47081056)
chr7 (300-376)||(2400285-2400361)
chr7 (300-376)||(28185593-28185669)
chr7 (300-376)||(32619127-32619203)
chr7 (300-376)||(42834477-42834553)
chr7 (328-376)||(44479905-44479953)
chr7 (328-376)||(47713687-47713735)
chr7 (344-429)||(47537967-47538056)
chr7 (319-376)||(37951130-37951187)
chr7 (340-376)||(36859393-36859429)
[»] chr3 (39 HSPs)
chr3 (297-376)||(17052861-17052940)
chr3 (297-429)||(4238748-4238884)
chr3 (297-429)||(32951264-32951400)
chr3 (297-429)||(10435131-10435267)
chr3 (300-429)||(3547549-3547681)
chr3 (300-376)||(45093720-45093796)
chr3 (307-376)||(35718040-35718109)
chr3 (300-376)||(28690516-28690592)
chr3 (298-429)||(27848950-27849084)
chr3 (319-429)||(49057875-49057989)
chr3 (296-376)||(21906992-21907072)
chr3 (314-376)||(9145516-9145578)
chr3 (298-376)||(52550801-52550879)
chr3 (300-429)||(36665019-36665151)
chr3 (328-429)||(38492080-38492184)
chr3 (328-429)||(46483579-46483683)
chr3 (300-376)||(18659052-18659128)
chr3 (300-387)||(43137851-43137941)
chr3 (322-429)||(25097315-25097426)
chr3 (328-376)||(34827350-34827398)
chr3 (309-423)||(48143774-48143890)
chr3 (300-429)||(7671441-7671574)
chr3 (298-376)||(29728283-29728361)
chr3 (299-421)||(48706980-48707105)
chr3 (319-376)||(7460005-7460062)
chr3 (299-376)||(37832899-37832976)
chr3 (328-421)||(38833692-38833788)
chr3 (319-376)||(45167318-45167375)
chr3 (319-376)||(54840313-54840370)
chr3 (300-376)||(1327311-1327387)
chr3 (328-376)||(32285361-32285409)
chr3 (328-376)||(51062418-51062466)
chr3 (328-376)||(53066402-53066450)
chr3 (300-354)||(5505088-5505142)
chr3 (322-376)||(10437304-10437358)
chr3 (319-376)||(8559190-8559247)
chr3 (319-376)||(10571329-10571386)
chr3 (331-424)||(15503056-15503151)
chr3 (319-376)||(51392477-51392534)
[»] chr2 (30 HSPs)
chr2 (297-429)||(40598125-40598262)
chr2 (298-376)||(38137715-38137793)
chr2 (301-423)||(41463651-41463777)
chr2 (300-429)||(30708728-30708861)
chr2 (300-429)||(32776028-32776161)
chr2 (300-421)||(20517419-20517543)
chr2 (300-376)||(4045418-4045494)
chr2 (299-375)||(42951339-42951415)
chr2 (299-429)||(332277-332410)
chr2 (328-429)||(7443019-7443124)
chr2 (328-429)||(38963547-38963652)
chr2 (306-376)||(40898646-40898716)
chr2 (319-387)||(16941982-16942053)
chr2 (319-387)||(17012647-17012718)
chr2 (300-376)||(3987417-3987493)
chr2 (300-376)||(14372077-14372153)
chr2 (300-376)||(23671376-23671452)
chr2 (322-429)||(39418148-39418259)
chr2 (319-376)||(14707719-14707776)
chr2 (319-376)||(36199136-36199193)
chr2 (319-376)||(38588074-38588131)
chr2 (319-376)||(44330403-44330460)
chr2 (300-376)||(18718239-18718315)
chr2 (300-376)||(27559575-27559651)
chr2 (300-376)||(34826912-34826988)
chr2 (300-376)||(40425434-40425510)
chr2 (300-376)||(41172942-41173018)
chr2 (328-376)||(42038551-42038599)
chr2 (322-376)||(4045872-4045926)
chr2 (328-376)||(4083235-4083283)
[»] chr8 (28 HSPs)
chr8 (297-429)||(31127933-31128069)
chr8 (297-429)||(18809273-18809409)
chr8 (297-424)||(11854521-11854653)
chr8 (300-424)||(44123673-44123801)
chr8 (300-429)||(12893531-12893664)
chr8 (310-424)||(25256344-25256461)
chr8 (300-429)||(45253749-45253882)
chr8 (300-376)||(40013651-40013727)
chr8 (319-429)||(13138260-13138374)
chr8 (299-429)||(29790941-29791075)
chr8 (330-376)||(886252-886298)
chr8 (300-429)||(8351008-8351141)
chr8 (319-429)||(43066146-43066259)
chr8 (300-376)||(3293287-3293363)
chr8 (300-376)||(38845200-38845276)
chr8 (299-429)||(1580893-1581027)
chr8 (328-429)||(6470873-6470978)
chr8 (298-376)||(45081810-45081888)
chr8 (319-375)||(23764637-23764694)
chr8 (308-376)||(10657986-10658054)
chr8 (328-376)||(14847238-14847286)
chr8 (300-376)||(30289924-30290000)
chr8 (300-376)||(30380530-30380606)
chr8 (322-424)||(14522402-14522508)
chr8 (297-376)||(38739654-38739733)
chr8 (300-369)||(2986339-2986408)
chr8 (300-376)||(2805661-2805737)
chr8 (300-376)||(37709899-37709975)
[»] chr6 (17 HSPs)
chr6 (297-429)||(25163161-25163297)
chr6 (300-429)||(33121542-33121675)
chr6 (297-376)||(29403641-29403720)
chr6 (295-376)||(13207138-13207219)
chr6 (296-376)||(7098058-7098134)
chr6 (300-429)||(643559-643692)
chr6 (296-421)||(8796046-8796174)
chr6 (328-429)||(18991932-18992036)
chr6 (319-376)||(25435431-25435487)
chr6 (298-376)||(11114563-11114641)
chr6 (319-376)||(22020295-22020352)
chr6 (328-376)||(29986343-29986391)
chr6 (300-420)||(19068908-19069029)
chr6 (298-376)||(16434713-16434791)
chr6 (298-376)||(31854816-31854894)
chr6 (319-376)||(24150760-24150817)
chr6 (328-376)||(30237193-30237242)
[»] scaffold0111 (1 HSPs)
scaffold0111 (315-376)||(38545-38606)
[»] scaffold0051 (1 HSPs)
scaffold0051 (298-376)||(41402-41480)
[»] scaffold0366 (2 HSPs)
scaffold0366 (296-376)||(14055-14135)
scaffold0366 (296-376)||(10389-10469)
[»] scaffold0027 (1 HSPs)
scaffold0027 (299-376)||(117320-117397)
[»] scaffold0459 (1 HSPs)
scaffold0459 (296-376)||(12748-12828)
[»] scaffold0092 (1 HSPs)
scaffold0092 (300-376)||(44293-44369)


Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 303
Target Start/End: Original strand, 50374085 - 50374370
Alignment:
Q  18 atttctaatgttgttttctttatccattattacgtttaccaatgtgtatgggtggtggtttggtttctacttaaaatgaaaaatgattacaggctagacg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50374085 atttctaatgttgttttctttatccattattacgtttaccaatgtgtgtgggtggtggtttggtttgtacttaaaatgaaaaatgattacaggctagacg 50374184  T
Q  118 ccagaaggggaaataaaacatatttatgcactgagaggagagccacataaagaataaatttgcagagtggtcagtgataggagcaagagtttgaaataga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50374185 ccagaaggggaaataaaacatatttatgcactgagaggagagccacataaagaataaatttgcagagtggtcagtgataggagcaagagtttgaaataga 50374284  T
Q  218 caagtcattgaaagtctaaggtgaattattcaggcgcgtttgggctgtgtctgaaaaactaaagttgctgcggtttacttattact 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50374285 caagtcattgaaagtctaaggtgaattattcaggcgcgtttgggctgtgtctaaaaaactaaagttgctgcggtttacttattact 50374370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 6923204 - 6923125
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6923204 tattactccctccgtcttatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatc 6923125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 299 - 429
Target Start/End: Complemental strand, 19525976 - 19525842
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnn 394  Q
    ||||||||||||||  |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||   |||||||| ||||            
T  19525976 ttactccctccgtcctatattaaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaaa 19525877  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||||||||||||||||||||||||| ||||    
T  19525876 ttatgaaaacttaatattttaaaaatattcatcga 19525842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 25644356 - 25644435
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25644356 tattactccctctgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatc 25644435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 424
Target Start/End: Original strand, 50033020 - 50033148
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||| ||||||| ||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||||   |||||||||||||        |    
T  50033020 tactctctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 50033119  T
Q  396 tatgaaaacttaatattttaaaaatattc 424  Q
    |||||||| ||||||||||||||||||||    
T  50033120 tatgaaaatttaatattttaaaaatattc 50033148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 19731426 - 19731294
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    |||||||| |||  ||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||||   ||||| |||||||       ||    
T  19731426 tactcccttcgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaatgctctactaaaacaatt 19731327  T
Q  397 atgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||| |||||||||||||||||||| ||||    
T  19731326 atgaaaatttaatattttaaaaatattcatcga 19731294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 424
Target Start/End: Original strand, 50035539 - 50035667
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||| ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||| |||||||||||||||| |   |||||||||||||        |    
T  50035539 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctactaaaaaaaat 50035638  T
Q  396 tatgaaaacttaatattttaaaaatattc 424  Q
    |||||||| ||||||||||||||||||||    
T  50035639 tatgaaaatttaatattttaaaaatattc 50035667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 26659839 - 26659972
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnt 395  Q
    ||||||||| |||||||||||| ||||  ||||||||| ||||||| ||| || ||| ||||||||| ||||||||   ||||||||||| |       |    
T  26659839 ttactccctgcgtctcatattatatgacctagttgactccgacacatgtatcactgcatatgttttagctttgatatcttcaattctctaataaaaaaat 26659938  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  26659939 tatgaaaatttaatattttaaaaatattcatcga 26659972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 429
Target Start/End: Original strand, 4209359 - 4209495
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnn 392  Q
    ||||||||||||||||| |  | || ||||| |||||||||  ||||||||||||||| | ||||||||||||||||||   |||||||||||||         
T  4209359 ttattactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctactaaaaa 4209458  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||| |||| || ||||||||||||||||| ||||    
T  4209459 aattataaaaattttatattttaaaaatattcatcga 4209495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 19631308 - 19631384
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| |||||||  |||||| |||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  19631308 tactctctccgtcctatattagatgacttaattgactccgacacacgtaccaatgcatatgttttatctttgatatc 19631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 429
Target Start/End: Complemental strand, 39786619 - 39786485
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnn 394  Q
    ||||||||||||||| |  | || ||||  |||||||||  |||||||||| |||||| ||||||||||||||||||   |||||||||||||           
T  39786619 attactccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaa 39786520  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||| |||| |||||||||||||||||||| ||||    
T  39786519 ttataaaaatttaatattttaaaaatattcatcga 39786485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 4264130 - 4264210
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  4264130 ttattactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 4264210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 5735271 - 5735347
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  5735271 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 5735347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 19634109 - 19634033
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||| | || || ||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  19634109 tactcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatctttgatatc 19634033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 28166274 - 28166350
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  28166274 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 28166350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 45198601 - 45198525
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  45198601 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 45198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 7739061 - 7738947
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatatttt 414  Q
    |||||||  ||||||||| ||||||||||| |||||| ||||||||||||||||||   |||||||||||||        |||| |||| ||||||||||    
T  7739061 taaatgacctagttgactccgacacacgtatcaatgcatatgttttatctttgatatattcaattctctactaaaaaaaattataaaaatttaatatttt 7738962  T
Q  415 aaaaatattcttcga 429  Q
    |||||||||| ||||    
T  7738961 aaaaatattcatcga 7738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 423
Target Start/End: Complemental strand, 51737214 - 51737088
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||| ||||||| ||||||| || |  | ||||||| |||||||||||||||||| |||||||||||||| |||   ||||||| || ||       ||    
T  51737214 tactctctccgtcccatattagataaccttgttgactccgacacacgtaccaatgcatatgttttatcttttatattttcaattcgctgctaaatttttt 51737115  T
Q  397 atgaaaacttaatattttaaaaatatt 423  Q
    ||||||| |||||||||||||||||||    
T  51737114 atgaaaatttaatattttaaaaatatt 51737088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 5123396 - 5123342
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  5123396 atgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 5123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 421
Target Start/End: Original strand, 47579287 - 47579411
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||||||||||| |  | |||||||  |||||||||   |||||| ||||||||| ||||||||||||||||||   |||||||||||||       ||    
T  47579287 tactccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatt 47579386  T
Q  397 atgaaaacttaatattttaaaaata 421  Q
    || |||| |||||||||||||||||    
T  47579387 ataaaaatttaatattttaaaaata 47579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 53568353 - 53568430
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| |||||||| ||||| |||||   ||||||||| |||||||| || |||||| ||||||||||||||||||||    
T  53568353 ttacttcctccgtcccatatcaaatgtcctagttgactccgacacacatatcaatgcatatgttttatctttgatatc 53568430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 3442605 - 3442529
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  3442605 tactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatctttgatatc 3442529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 3901400 - 3901324
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  3901400 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 3901324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 26205965 - 26205889
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||   |||||| ||||||||| ||||||||||||||||||||    
T  26205965 tactccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatctttgatatc 26205889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 42187218 - 42187107
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc---aattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    |||||||||||||||  |||| |||||||||||| ||| ||||||||||||||||   |||||||||||        |||| |||| |||||||||||||    
T  42187218 atgatttagttgactctgacatacgtaccaatgcatatattttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatattttaaa 42187119  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  42187118 aatattcatcga 42187107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 46212611 - 46212535
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  46212611 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 46212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 46803631 - 46803707
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  46803631 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 46803707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 429
Target Start/End: Complemental strand, 3443625 - 3443515
Alignment:
Q  323 tgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaa 418  Q
    ||||||| ||||||  ||||||||||| ||||| ||||||||||||||||||   |||||||||||||        |||| |||| ||||||||||||||    
T  3443625 tgatttaattgactctgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaa 3443526  T
Q  419 atattcttcga 429  Q
    |||||| ||||    
T  3443525 atattcatcga 3443515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 19652494 - 19652384
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaa 418  Q
    ||||| ||||||||| ||||| |||||||||| | ||||||||||||||||||   ||||||||||||          ||||||| ||||||||||||||    
T  19652494 atgatctagttgactccgacatacgtaccaattcatatgttttatctttgatatcttcaattctctacaaaaaaaaaaatgaaaatttaatattttaaaa 19652395  T
Q  419 atattcttcga 429  Q
    |||||| ||||    
T  19652394 atattcatcga 19652384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 39260370 - 39260260
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaa 418  Q
    ||||| |||||||||  |||||| |||||||| | ||| ||||||||||||||   |||||||||||||       |||| |||| ||||||||||||||    
T  39260370 atgatctagttgactctgacacatgtaccaatacatatattttatctttgatatcttcaattctctactaaaaaaattataaaaatttaatattttaaaa 39260271  T
Q  419 atattcttcga 429  Q
    |||||| ||||    
T  39260270 atattcatcga 39260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 55014290 - 55014337
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatat 375  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  55014290 tagttgactccgacacacgtactaatgcatatgttttatctttgatat 55014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 19170772 - 19170667
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctcta-ctnnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    ||||||||||||||||| |||||||||| ||| |||||||||| |||   ||||||||||| |        ||||||||| |||||||||||||||||||    
T  19170772 tagttgacttcgacacatgtaccaatgcatatattttatctttaatatcttcaattctctaccaaaaaaaattatgaaaatttaatattttaaaaatatt 19170673  T
Q  424 cttcga 429  Q
    | ||||    
T  19170672 catcga 19170667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 1377051 - 1377108
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  1377051 taaatgacgtagttgactatgacacacataccaatgcatatgttttatctttgatatc 1377108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 37688275 - 37688218
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| ||| |||||  ||||||| ||||||||| ||||||||||||||||||||    
T  37688275 taaatgatctagatgactctgacacacataccaatgcatatgttttatctttgatatc 37688218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 55997141 - 55997190
Alignment:
Q  327 ttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||||| |||||||||||||||||| || |||||||||||||||||    
T  55997141 ttagatgactccgacacacgtaccaatgcatacgttttatctttgatatc 55997190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 18360206 - 18360158
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||| ||||||||||||| ||||||||||||||||||||    
T  18360206 tagttgactctgacgcacgtaccaatgcatatgttttatctttgatatc 18360158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 23603880 - 23603832
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatctttgatatc 23603832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 36602722 - 36602770
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||| ||||||||||||| ||||||||||||||||||||    
T  36602722 tagttgactctgacgcacgtaccaatgcatatgttttatctttgatatc 36602770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 55190947 - 55190899
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  55190947 tagttgactctgacacacttaccaatgcatatgttttatctttgatatc 55190899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 49768447 - 49768521
Alignment:
Q  302 ctccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||| |  | ||||||| ||||||||||  |||| || || |||||| ||||||||||||||||||||    
T  49768447 ctccctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatctttgatatc 49768521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 23255934 - 23256011
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | || ||||  |||||||||  ||||||||||||||||| ||| |||||| |||||||||    
T  23255934 ttactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatatttgatatc 23256011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 5744344 - 5744268
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || |||||  ||||||||||||||||||||    
T  5744344 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatctttgatatc 5744268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 21859152 - 21859090
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    |||||||||  ||||||| ||||||| | ||||||||||||||||||   |||||||||||||    
T  21859152 tagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 21915015 - 21914953
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    |||||||||  ||||||| ||||||| | ||||||||||||||||||   |||||||||||||    
T  21915015 tagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 4300096 - 4299967
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnn 393  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  4300096 tattacttcctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 4299997  T
Q  394 nttatgaaaacttaatattttaaaaatatt 423  Q
     |||||||||||||||||||||||||||||    
T  4299996 attatgaaaacttaatattttaaaaatatt 4299967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 970135 - 970271
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||   ||||||||||| |          
T  970135 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgttatcttcaattctctattaaaaaa 970234  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  970235 aattatgaaaacttaatattttaaaaatattcatcga 970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 43067226 - 43067362
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   |||||||| || |          
T  43067226 tattacttcctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttattaaaaaa 43067325  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  43067326 aattatgaaaacttaatattttaaaaatattcatcga 43067362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 39405761 - 39405897
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| |||   ||||||||||| |          
T  39405761 tattactccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 39405860  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      ||||||||||||||||||||||||| |||| ||||    
T  39405861 aattatgaaaacttaatattttaaaaagattcatcga 39405897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 16048080 - 16048159
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16048080 tattactctctccgtcccatatcaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatc 16048159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 22613973 - 22613837
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||||||| |||| ||| ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||   |||||| |||| |          
T  22613973 tattactcccttcgtcccatgttaaatgatctagttgacttagacacacgtaccaatgcatatgttttatctttgatatcttcaattttctattaaaaaa 22613874  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  22613873 aattatgaaaacttaatattttaaaaatattcatcga 22613837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 19889654 - 19889786
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||||||| ||||||||||| | ||  ||||||||| ||| |||||||||||||| ||||||||||||||||||   |||||||||||||       ||    
T  19889654 tactccctctgtctcatattagaggacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatt 19889753  T
Q  397 atgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||| | |||||||||||||||||| ||||    
T  19889754 atgaaaattgaatattttaaaaatattcatcga 19889786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 417
Target Start/End: Original strand, 42421685 - 42421805
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||| ||||||  ||||||| ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||   |||||||||||||       ||    
T  42421685 tactcactccgttccatattagatgatctagttgactccgacacacgtacctatgcatatgttttatctttgatatcttcaattctctactaaaaaaatt 42421784  T
Q  397 atgaaaacttaatattttaaa 417  Q
    ||||||| |||||||||||||    
T  42421785 atgaaaatttaatattttaaa 42421805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 41411419 - 41411343
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | || |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41411419 tactccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatc 41411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 15268108 - 15268186
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||  ||||| |||||||||| ||| |||||    
T  15268108 attactcccttcgtctcatattagatgatttagttgactccgacacacgtattaatgcatatgttttatttttaatatc 15268186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 1830653 - 1830730
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | || |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  1830653 ttactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatc 1830730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 19868918 - 19868814
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||   |||||| ||||||       ||||||||| ||||||||||||||||||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgctattttcaattgtctactaaaaatattatgaaaatttaatattttaaaaatattc 19868819  T
Q  425 ttcga 429  Q
     ||||    
T  19868818 atcga 19868814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 40316121 - 40316197
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | || |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40316121 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatc 40316197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 37516143 - 37516220
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | || ||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  37516143 ttactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 37516220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 42148306 - 42148383
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  42148306 ttactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 42148383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 30779978 - 30779879
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    ||||||||| |||||||||||||||| | |||||||||||||| |||   ||||||| |||||       ||||||||| ||||||||||||||||||||    
T  30779978 tagttgactccgacacacgtaccaatacatatgttttatctttcatatcttcaattcactactaaaaaaattatgaaaatttaatattttaaaaatattc 30779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 39036410 - 39036543
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    |||||||||||||||  | || ||||  |||||||||  ||||||||||||||||  ||||||||||||||||||   |||||||||||||        |    
T  39036410 tactccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatctttgatatcttcaattctctactaaaaaaaat 39036509  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||| |||| |||||||||||||||||||| ||||    
T  39036510 tataaaaatttaatattttaaaaatattcatcga 39036543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 23988578 - 23988655
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  23988578 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 23988655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 25563515 - 25563576
Alignment:
Q  315 atattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||| ||||  ||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  25563515 atattagatgacctagttgacttcaacacacgttccaatgcatatgttttatctttgatatc 25563576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 14475467 - 14475419
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  14475467 tagttgactccgacacacgtacaaatgcatatgttttatctttgatatc 14475419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 35448258 - 35448182
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 35448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 4925060 - 4924966
Alignment:
Q  339 gacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||||||||||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||| ||||    
T  4925060 gacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatcga 4924966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 32334904 - 32334825
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||| ||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  32334904 tattactccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 32334825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 5213155 - 5213050
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  ||||||||||||||||| |||||||||||||| |||   |||||||||||||        |||| |||| |||||||||||||||||||    
T  5213155 tagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 5213056  T
Q  424 cttcga 429  Q
    | ||||    
T  5213055 catcga 5213050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 35290314 - 35290419
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  ||||||||||||||||| ||| ||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||    
T  35290314 tagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 35290413  T
Q  424 cttcga 429  Q
    | ||||    
T  35290414 catcga 35290419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 37843808 - 37843703
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctac-tnnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  ||||||||||||||||| |||||||||| |||||||   ||||||||||||         ||||||||| |||||||||||||||||||    
T  37843808 tagttgactctgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctacaaaaaaaaattatgaaaatttaatattttaaaaatatt 37843709  T
Q  424 cttcga 429  Q
    | ||||    
T  37843708 catcga 37843703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 43517293 - 43517188
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgat---atcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  ||||||||||| ||||| |||||||||||||||||   ||||||||||||||        |||| |||| |||||||||||||||||||    
T  43517293 tagttgactctgacacacgtactaatgcatatgttttatctttgatatcatcaattctctactaaaaaaaattataaaaaattaatattttaaaaatatt 43517194  T
Q  424 cttcga 429  Q
    | ||||    
T  43517193 catcga 43517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 5364448 - 5364510
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||    
T  5364448 tagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 5364510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 29627268 - 29627344
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || |||||| ||||||||||||||||||||    
T  29627268 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatc 29627344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 38697963 - 38698039
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  || ||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  38697963 tactccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatctttgatatc 38698039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 39894781 - 39894857
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | ||| |||| |||||||||  |||| || ||||||||| ||||||||||||||||||||    
T  39894781 tactccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatctttgatatc 39894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 40512913 - 40512865
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  40512913 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 40512865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 2864053 - 2864087
Alignment:
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||||||||||||||||||||||||| ||||    
T  2864053 ttatgaaaacttaatattttaaaaatattcatcga 2864087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 19088016 - 19087955
Alignment:
Q  315 atattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||| ||||  ||||||||| |||||||||||||||||| || ||||||| | |||||||    
T  19088016 atattagatgacgtagttgactccgacacacgtaccaatgcataagttttatttatgatatc 19087955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 32002256 - 32002199
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| || ||||||  |||| || ||||||||| ||||||||||||||||||||    
T  32002256 taaatgatctacttgactctgacatacataccaatgcatatgttttatctttgatatc 32002199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 16048186 - 16048218
Alignment:
Q  397 atgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||||||||||||||||||||||| ||||    
T  16048186 atgaaaacttaatattttaaaaatattcatcga 16048218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 16265030 - 16265166
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  16265030 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 16265129  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  16265130 aattatgaaaacttaatattttaaaaatattcatcga 16265166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 24982348 - 24982484
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||   ||||||||||| |          
T  24982348 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctattaaaaaa 24982447  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  24982448 aattatgaaaacttaatattttaaaaatattcatcga 24982484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 16266159 - 16266295
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  16266159 tattattccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 16266258  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  16266259 atttatgaaaacttaatattttaaaaatattcatcga 16266295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 26441634 - 26441770
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  26441634 tattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 26441733  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  26441734 aattatgaaaacttaatattttaaaaatattcatcga 26441770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 43680066 - 43680203
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact--nnnn 391  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||   ||||||||||| |          
T  43680066 tattactccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 43680165  T
Q  392 nnnttatgaaaacttaatattttaaaaatattcttcga 429  Q
       |||||||||||||||||||||||||||||| ||||    
T  43680166 aaattatgaaaacttaatattttaaaaatattcatcga 43680203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 3898835 - 3898699
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||   |||||| |||| |          
T  3898835 tattactccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatatgttttatctttgatatcttcaattttctattaaaaaa 3898736  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  3898735 aattatgaaaacttaatattttaaaaatattcatcga 3898699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 424
Target Start/End: Complemental strand, 23569941 - 23569807
Alignment:
Q  294 acttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctcta-ctnn 389  Q
    ||||| ||||||||||||| |  | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |       
T  23569941 acttaatactccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaa 23569842  T
Q  390 nnnnnttatgaaaacttaatattttaaaaatattc 424  Q
         ||||||||| ||||||||||||||||||||    
T  23569841 aaaaattatgaaaatttaatattttaaaaatattc 23569807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 418
Target Start/End: Original strand, 50481278 - 50481399
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||||||||||| ||||||| |||| |||||||| | |||||||||||||||||| ||||||||||||||||||   ||||||||||| |       ||    
T  50481278 tactccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaatt 50481377  T
Q  397 atgaaaacttaatattttaaaa 418  Q
    ||||||| ||||||||||||||    
T  50481378 atgaaaatttaatattttaaaa 50481399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 16751714 - 16751581
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc---aattctctact-nnnnnnnt 395  Q
    ||||||||||||  ||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||||||   |||||||| ||        |    
T  16751714 tactccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctcttctaaacacaat 16751615  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  16751614 tatgaaaatttaatattttaaaaatattcatcga 16751581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 3529176 - 3529303
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||||||||||| | || | |||||| |||||||||  ||||||||||||||||| ||||||||||||||||||   |||||||||||||        |    
T  3529176 tactccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatattcaattctctactaaaacaatt 3529275  T
Q  396 tatgaaaacttaatattttaaaaatatt 423  Q
    |||||||| |||||||||||||||||||    
T  3529276 tatgaaaatttaatattttaaaaatatt 3529303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 47222214 - 47222290
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||||| || ||||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  47222214 tacttcctccatcccatattaaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatc 47222290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 38738239 - 38738164
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatat 375  Q
    |||| ||||||||| |||||| ||||  ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  38738239 tacttcctccgtctaatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatat 38738164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 4605020 - 4605074
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4605020 atgatctagttgactccgacacacgtaccaatgcatatgttttatctttgatatc 4605074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 32988611 - 32988534
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  32988611 ttactccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 32988534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 50539260 - 50539336
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  50539260 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 50539336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 52378989 - 52379065
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  52378989 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 52379065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 25531777 - 25531911
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnn 394  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||            
T  25531777 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 25531876  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||| |||| |||||||||||||||||||| ||||    
T  25531877 ttataaaaatttaatattttaaaaatattcatcga 25531911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 45235101 - 45235030
Alignment:
Q  305 cctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||  | ||| ||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  45235101 cctccgtctctgaataagtgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 45235030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 29161861 - 29161918
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||||||||  ||||||||||||||| | ||||||||||||||||||||    
T  29161861 taaatgatctagttgactctgacacacgtaccaattcatatgttttatctttgatatc 29161918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 42708523 - 42708580
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||||  ||||||| ||||||||| |||||||||| |||||||||    
T  42708523 taaatgatttagttgactctgacacacataccaatgcatatgttttatatttgatatc 42708580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 48219908 - 48219827
Alignment:
Q  295 cttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  48219908 cttactactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 48219827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 31971626 - 31971515
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    ||||| |||||||||  |||||| |||||||||| ||||||||||||||||||   |||| ||||||||        ||||||||| |||||||||||||    
T  31971626 atgatctagttgactctgacacatgtaccaatgcatatgttttatctttgatatattcaactctctactaaaaaaaattatgaaaatttaatattttaaa 31971527  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  31971526 aatattcatcga 31971515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 32565768 - 32565879
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    |||| ||||||||||  ||||||||||||||||| |||||||| |||||||||   |||||||||||||        |||| |||| |||||||||||||    
T  32565768 atgacttagttgactctgacacacgtaccaatgcatatgttttctctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaa 32565867  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  32565868 aatattcatcga 32565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 48376186 - 48376234
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  48376186 tagttaactttgacacacgtaccaatgcatatgttttatctttgatatc 48376234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 49805517 - 49805437
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| |||||||||||| |  | |||||||| |||||||||  |||| || ||||||||| ||||||||||||||||||||    
T  49805517 ttatcactccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatctttgatatc 49805437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 21034785 - 21034715
Alignment:
Q  306 ctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| ||||| | |||||||| |||||| |||| || |  ||||||||||||||||||||    
T  21034785 ctccgtctcatattagatgatctggttgactttgacacatgtactaaggtatatgttttatctttgatatc 21034715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 48265074 - 48264996
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| |||||||||||||| |||||    
T  48265074 attactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatc 48264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 39354506 - 39354449
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  39354506 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 39354449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 30529311 - 30529235
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  |||||| |||||||||| ||||||||||||| ||||||    
T  30529311 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatc 30529235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 387
Target Start/End: Complemental strand, 41501828 - 41501779
Alignment:
Q  341 cacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||||||    
T  41501828 cacacgtaccaatgcatatgttttatctttgatatattcaattctctact 41501779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 50876362 - 50876440
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||  |||||||||   |||||  ||||||||| ||||||||||||||||||||    
T  50876362 attactccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatctttgatatc 50876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 38458768 - 38458805
Alignment:
Q  339 gacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  38458768 gacacacataccaatgcatatgttttatctttgatatc 38458805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 23330452 - 23330528
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| || |||| ||||||| ||||| ||||||| | ||||| | ||| |||||| |||||||||||||| |||||    
T  23330452 tactctctacgtcccatattagatgatctagttgattccgacatatgtatcaatgcatatgttttatctttcatatc 23330528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 37231828 - 37231691
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact--nnnn 391  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  37231828 tattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 37231729  T
Q  392 nnnttatgaaaacttaatattttaaaaatattcttcga 429  Q
       |||||||||||||||||||||||||||||| ||||    
T  37231728 aaattatgaaaacttaatattttaaaaatattcatcga 37231691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 10464379 - 10464243
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  10464379 tattactccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 10464280  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  10464279 aattatgaaaacttaatattttaaaaatattcatcga 10464243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 35501011 - 35500875
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  35501011 tattactccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 35500912  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  35500911 aattatgaaaacttaatattttaaaaatattcatcga 35500875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 34478272 - 34478139
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||        |    
T  34478272 tactccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 34478173  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||||||||||||||||||||||||| ||||    
T  34478172 tatgaaaacttaatattttaaaaatattcatcga 34478139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 36643159 - 36643289
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||| ||| |||| ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  36643159 tattacttccttcgtcccatattaaatgatctaattgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 36643258  T
Q  393 nnttatgaaaacttaatattttaaaaatatt 423  Q
      |||||||||||||||||||||||||||||    
T  36643259 aattatgaaaacttaatattttaaaaatatt 36643289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 429
Target Start/End: Complemental strand, 31497965 - 31497832
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnt 395  Q
    |||||||||| ||| ||||||| || |  ||||||||| |||||||| ||| ||| | ||||||||||||||||||   |||||| ||||||       |    
T  31497965 ttactccctcggtcccatattagataacctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatctactaaaaaagt 31497866  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  31497865 tatgaaaatttaatattttaaaaatattcatcga 31497832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 36905524 - 36905602
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | ||||||||||||||||||  ||||||| ||||||| | ||||||||||||||||||||    
T  36905524 attactccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatctttgatatc 36905602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 21392040 - 21392151
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc---aattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||   |||||||||||        |||| |||| |||||||||||||    
T  21392040 atgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctactaaaaaaaattataaaaatttaatattttaaa 21392139  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  21392140 aatattcatcga 21392151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 19072765 - 19072845
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||| ||||||||||||||||||||    
T  19072765 ttattactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatc 19072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 31466591 - 31466543
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  31466591 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 31466543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 36819696 - 36819772
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  36819696 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 36819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 48531344 - 48531455
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    |||||||||||||||  |||||||||| |||||| ||| ||||||||||||||   |||||||||||||        |||| |||| |||||||||||||    
T  48531344 atgatttagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctactaaaaaatattataaaaatttaatattttaaa 48531443  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  48531444 aatattcatcga 48531455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 23474202 - 23474102
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  |||||||||| |||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||    
T  23474202 tagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 23474103  T
Q  424 c 424  Q
    |    
T  23474102 c 23474102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 29770732 - 29770659
Alignment:
Q  303 tccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||| |||| ||||||| | ||| ||||||||||||||| ||||||| |||| ||| |||||| |||||||||    
T  29770732 tcccttcgtcccatattagaggatctagttgacttcgacatacgtaccgatgcatattttttatttttgatatc 29770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 42086880 - 42086823
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  42086880 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 42086823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 47080979 - 47081056
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | | |||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  47080979 ttactccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 47081056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 2400285 - 2400361
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||  ||||||||| ||||||||||||||||||||    
T  2400285 tactccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatctttgatatc 2400361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 28185669 - 28185593
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||| | ||||||||||||||||||||    
T  28185669 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatc 28185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 32619203 - 32619127
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | ||||||| ||||||||||  ||||||| || |||||| |||||||||| |||||||||    
T  32619203 tactccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttatttttgatatc 32619127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 42834553 - 42834477
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||||  | |||||||  || ||||||| || |||| ||||||||  ||||||||||||||||||||    
T  42834553 tactccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatctttgatatc 42834477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 44479953 - 44479905
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  44479953 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 44479905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 47713735 - 47713687
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  47713735 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 47713687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 47537967 - 47538056
Alignment:
Q  344 acgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||| ||||    
T  47537967 acgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatattcatcga 47538056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 37951187 - 37951130
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||| ||| ||||||||| ||||||||||||||||||||    
T  37951187 taaatgacctagttgactctgacgcacataccaatgcatatgttttatctttgatatc 37951130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 36859429 - 36859393
Alignment:
Q  340 acacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  36859429 acacacataccaatgcatatgttttatctttgatatc 36859393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 17052861 - 17052940
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17052861 tattactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatc 17052940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 4238884 - 4238748
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||   ||||||||||| |          
T  4238884 tattactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 4238785  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  4238784 aattatgaaaacttaatattttaaaaatattcatcga 4238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 32951400 - 32951264
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||   ||||||||||| |          
T  32951400 tattactccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatatgttttatctttggtatcttcaattctctattaaaaaa 32951301  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  32951300 aattatgaaaacttaatattttaaaaatattcatcga 32951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 10435131 - 10435267
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||   ||||||||||| |          
T  10435131 tattactctatccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctattaaaaaa 10435230  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  10435231 aattatgaaaacttaatattttaaaaatattcatcga 10435267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 3547681 - 3547549
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||||||||||| ||||||| ||||  || |||||| |||||||||||||||||| ||||||||||||||||||   |||||| ||||||       ||    
T  3547681 tactccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctactaaaaaaatt 3547582  T
Q  397 atgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||| |||||||||||||||||||| ||||    
T  3547581 atgaaaatttaatattttaaaaatattcatcga 3547549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 45093720 - 45093796
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||  ||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  45093720 tactccctccgttacatattagatgatttagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 45093796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 35718109 - 35718040
Alignment:
Q  307 tccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  35718109 tccgtctcatattagatgatttagttgactctgacacacgtaccaatgcatatgttttatccttgatatc 35718040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 28690516 - 28690592
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| ||||||| ||||  ||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  28690516 tactccctccgtcacatattagatgacctagttgactccgacacacataccaatgcatatgttttatctttgatatc 28690592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 429
Target Start/End: Original strand, 27848950 - 27849084
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnn 394  Q
    ||||||||||||||| |  |||| ||||  |||||||||| |||| || ||||||||| ||||||||||||||||||   |||||||||||||           
T  27848950 attactccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaa 27849049  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||| |||| |||||||||||||||||||| ||||    
T  27849050 ttataaaaatttaatattttaaaaatattcatcga 27849084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 49057875 - 49057989
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctcta-ctnnnnnnnttatgaaaacttaatatttt 414  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |        ||||||||| ||||||||||    
T  49057875 taaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaaaaaaattatgaaaatttaatatttt 49057974  T
Q  415 aaaaatattcttcga 429  Q
    |||||||||| ||||    
T  49057975 aaaaatattcatcga 49057989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 21906992 - 21907072
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  21906992 ttattactccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 21907072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 376
Target Start/End: Original strand, 9145516 - 9145578
Alignment:
Q  314 catattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  9145516 catattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatc 9145578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 52550879 - 52550801
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||| ||||||| ||||||| |||| |||||||||| ||||| |||||| ||||| ||||||||||||| ||||||    
T  52550879 attactctctccgtcccatattagatgacttagttgactccgacatacgtactaatgcatatgttttatcttcgatatc 52550801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 36665019 - 36665151
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||| |||||| | |||||| |||| ||| |||||| ||| |||||||||||||| ||||||||||||||||||   ||| ||||||| |       ||    
T  36665019 tactctctccgttttatattagatgacttaattgactccgatacacgtaccaatgcatatgttttatctttgatatcttcatttctctattaaaaaaatt 36665118  T
Q  397 atgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||  ||||||||||||||||||| ||||    
T  36665119 atgaaaatataatattttaaaaatattcatcga 36665151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 38492080 - 38492184
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    |||||||||  ||||||||||||||||| |||||||||||||| |||   |||||||||||||       |||| |||| ||||||||||||||||||||    
T  38492080 tagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctactaaaaaaattataaaaatttaatattttaaaaatattc 38492179  T
Q  425 ttcga 429  Q
     ||||    
T  38492180 atcga 38492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 46483579 - 46483683
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||   |||||||||||||       |||| |||  ||||||||||||||||||||    
T  46483579 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaattataaaattttaatattttaaaaatattc 46483678  T
Q  425 ttcga 429  Q
     ||||    
T  46483679 atcga 46483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 18659052 - 18659128
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  18659052 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 18659128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 43137851 - 43137941
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||    
T  43137851 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatattttcaattctctact 43137941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 25097426 - 25097315
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    |||| ||||||||||   |||||||||||||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||    
T  25097426 atgacttagttgactctaacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaa 25097327  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  25097326 aatattcatcga 25097315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 34827350 - 34827398
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  34827350 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 34827398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 423
Target Start/End: Original strand, 48143774 - 48143890
Alignment:
Q  309 cgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata--tcaattctctactnnnnnnnttatgaaaactt 406  Q
    ||||||||| |||||||| ||||||||| |||||| | ||||||| | |||| |||||||||||||  |||||||| ||||       ||||||||| ||    
T  48143774 cgtctcatactaaatgatctagttgactccgacactcataccaatacatatggtttatctttgatatttcaattctgtactaaaaaaattatgaaaattt 48143873  T
Q  407 aatattttaaaaatatt 423  Q
     ||||| ||||||||||    
T  48143874 gatattataaaaatatt 48143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 7671574 - 7671441
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    |||||| |||||||||||||| ||||  ||||||| |  ||| || ||| |||||| ||||||||||||||||||   |||||||||||||        |    
T  7671574 tactccgtccgtctcatattagatgacctagttgattcagacgcatgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 7671475  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||||||||  ||||||||||||||||||| ||||    
T  7671474 tatgaaaatataatattttaaaaatattcatcga 7671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 29728361 - 29728283
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||  |||||||||  |||||| |||||||||| ||||||||||||| ||||||    
T  29728361 attactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatc 29728283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 421
Target Start/End: Complemental strand, 48707105 - 48706980
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnt 395  Q
    |||||||||||||| |  | ||| |||||||||||| |  |||| || ||||||||| ||||||||||||||||||   |||||||||||||            
T  48707105 ttactccctccgtccctaaataagtgatttagttgattctgacatacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 48707006  T
Q  396 tatgaaaacttaatattttaaaaata 421  Q
    ||| |||| |||||||||||||||||    
T  48707005 tataaaaatttaatattttaaaaata 48706980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 7460062 - 7460005
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  7460062 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 7460005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 37832899 - 37832976
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| |||||||||| |||||||||    
T  37832899 ttactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatttttgatatc 37832976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 38833692 - 38833788
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaata 421  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||        ||| |||| |||||||||||||||||    
T  38833692 tagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaatataaaaatttaatattttaaaaata 38833788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 45167318 - 45167375
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  45167318 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 45167375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 54840370 - 54840313
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  54840370 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 54840313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 1327311 - 1327387
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||   ||| || ||||||||| ||||||||||||||||||||    
T  1327311 tactccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatctttgatatc 1327387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 32285409 - 32285361
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||||||||||| | ||||||||||||||||||||    
T  32285409 tagttgactctgacacacgtaccaatacatatgttttatctttgatatc 32285361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 51062418 - 51062466
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  51062418 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 51062466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 53066402 - 53066450
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  53066402 tagttgactctgacacacttaccaatgcatatgttttatctttgatatc 53066450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 5505142 - 5505088
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatg 354  Q
    |||||| ||||||||||||||||||||  |||||||| || ||||| ||||||||    
T  5505142 tactccatccgtctcatattaaatgatacagttgactccgtcacacataccaatg 5505088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 10437304 - 10437358
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||||||||||  |||||||||||||||   ||||||||||||||||||||    
T  10437304 atgacttagttgactctgacacacgtaccaatttatatgttttatctttgatatc 10437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 8559247 - 8559190
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| |||||||||||||| |||||    
T  8559247 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatc 8559190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 10571386 - 10571329
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||| | ||||||||||||||||||||    
T  10571386 taaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatc 10571329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 424
Target Start/End: Original strand, 15503056 - 15503151
Alignment:
Q  331 ttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    |||||| ||||| ||||| |||||| ||||||||||||||||||   |||||||||||         ||||||||| ||||||||||||||||||||    
T  15503056 ttgactccgacatacgtatcaatgcatatgttttatctttgatatattcaattctcta-aaaaaaaattatgaaaatttaatattttaaaaatattc 15503151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 51392534 - 51392477
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||   |||||| ||||||||| ||||||||||||||||||||    
T  51392534 taaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatc 51392477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 40598125 - 40598262
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact--nnnn 391  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  40598125 tattactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 40598224  T
Q  392 nnnttatgaaaacttaatattttaaaaatattcttcga 429  Q
       |||||||||||||||||||||||||||||| ||||    
T  40598225 aaattatgaaaacttaatattttaaaaatattcatcga 40598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 38137793 - 38137715
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||| ||| |||||||| ||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  38137793 attactcccttcgtttcatattagatgatctagttgactccgacacacgtacaaatgcatatgttttatctttgatatc 38137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 423
Target Start/End: Complemental strand, 41463777 - 41463651
Alignment:
Q  301 actccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnntt 396  Q
    |||||||||||| |  | |||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||   |||||||||||||        ||    
T  41463777 actccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaatt 41463678  T
Q  397 atgaaaacttaatattttaaaaatatt 423  Q
    ||||||| |||||||||||||||||||    
T  41463677 atgaaaatttaatattttaaaaatatt 41463651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 30708728 - 30708861
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    |||||||||||||||  | ||| |||  |||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||||        |    
T  30708728 tactccctccgtctctgaataagtgacctagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 30708827  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||| |||| |||||||||||||||||||| ||||    
T  30708828 tataaaaatttaatattttaaaaatattcatcga 30708861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 32776161 - 32776028
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctac-tnnnnnnnt 395  Q
    ||||||||||||| | || || ||||  ||||||||| ||| |||||||||||||| ||||||||||||||||||   ||||||||||||         |    
T  32776161 tactccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctacaaaaataaat 32776062  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  32776061 tatgaaaatttaatattttaaaaatattcatcga 32776028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 421
Target Start/End: Original strand, 20517419 - 20517543
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    |||||||||||||||  | |||||||  || ||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||       ||    
T  20517419 tactccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatt 20517518  T
Q  397 atgaaaacttaatattttaaaaata 421  Q
    || |||| |||||||||||||||||    
T  20517519 ataaaaatttaatattttaaaaata 20517543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 4045494 - 4045418
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||||| |||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  4045494 tactccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatctttgatatc 4045418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 375
Target Start/End: Original strand, 42951339 - 42951415
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatat 375  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||| |||||  |||||||||| ||||||||    
T  42951339 ttactccctccatcttatattagatgatctagttgactccgacacacgtatcaatgtatatgttttatttttgatat 42951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 332277 - 332410
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact--nnnnnn 393  Q
    |||||||||||||| ||||||| ||||  || |||||| ||||||  ||||||| || ||||||||||||||||||   |||||||||||||            
T  332277 ttactccctccgtcccatattagatgacctatttgactccgacac--gtaccaacgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 332374  T
Q  394 nttatgaaaacttaatattttaaaaatattcttcga 429  Q
     ||||||||| |||||||||||||||||||| ||||    
T  332375 attatgaaaatttaatattttaaaaatattcatcga 332410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 7443124 - 7443019
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||    
T  7443124 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 7443025  T
Q  424 cttcga 429  Q
    | ||||    
T  7443024 catcga 7443019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 38963547 - 38963652
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgat---atcaattctctac-tnnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    ||||||||||||         ||||||||| |||||||||||||||||||    
T  38963547 tagttaacttcgacacacgtaccaatgcatatgttttatctttgatttcttcaattctctacaaaaaaaaattatgaaaatttaatattttaaaaatatt 38963646  T
Q  424 cttcga 429  Q
    | ||||    
T  38963647 catcga 38963652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 40898646 - 40898716
Alignment:
Q  306 ctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||| ||| |||||| ||||| ||||||||| |||||||||||| ||||  ||||||||||||||||||||    
T  40898646 ctccatcttatattagatgatctagttgactccgacacacgtactaatgtatatgttttatctttgatatc 40898716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 16942053 - 16941982
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||    
T  16942053 taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 16941982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 17012718 - 17012647
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact 387  Q
    |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||    
T  17012718 taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 17012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 3987493 - 3987417
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| ||||||| | ||||||||||||||||||||    
T  3987493 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatctttgatatc 3987417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 14372077 - 14372153
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  14372077 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 14372153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 23671376 - 23671452
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  23671376 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 23671452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 39418259 - 39418148
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    ||||| |||||||||||||||||| ||||||| | ||| ||||||||||||||   |||||| ||||||        ||||||||| |||||||||||||    
T  39418259 atgatctagttgacttcgacacacttaccaatacatatattttatctttgatatcttcaattatctactaaaaaaaattatgaaaatttaatattttaaa 39418160  T
Q  418 aatattcttcga 429  Q
    ||||||| ||||    
T  39418159 aatattcatcga 39418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 14707776 - 14707719
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  14707776 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 14707719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 36199193 - 36199136
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||||||||  ||||||| ||| ||||| ||||||||||||||||||||    
T  36199193 taaatgatctagttgactctgacacacatactaatgcatatgttttatctttgatatc 36199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 38588131 - 38588074
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||||||||  || |||| ||||||||| ||||||||||||||||||||    
T  38588131 taaatgatctagttgactctgatacacataccaatgcatatgttttatctttgatatc 38588074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 44330403 - 44330460
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  44330403 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 44330460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 18718239 - 18718315
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| || |||||| ||||||||||||||||||||    
T  18718239 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatc 18718315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 27559575 - 27559651
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||| || |||||  ||||||||||||||||||||    
T  27559575 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatctttgatatc 27559651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 34826912 - 34826988
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||| ||||| ||||||||||||||||||||    
T  34826912 tactccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatctttgatatc 34826988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 40425510 - 40425434
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||| ||||||||||||||||||||    
T  40425510 tactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatc 40425434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 41173018 - 41172942
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  || ||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  41173018 tactccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatctttgatatc 41172942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 42038551 - 42038599
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  42038551 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 42038599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 4045872 - 4045926
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  |||| |||||| ||||| ||||||||||||||||||||    
T  4045872 atgatttagttgattctgacatacgtactaatgcatatgttttatctttgatatc 4045926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 4083235 - 4083283
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||| |||||||| || |||||| |||||||||||||| |||||    
T  4083235 tagttgactccgacacacatatcaatgcatatgttttatctttaatatc 4083283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 31128069 - 31127933
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  31128069 tattacttcctctgtcccatattaaatgatttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 31127970  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  31127969 aattatgaaaacttaatattttaaaaatattcatcga 31127933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 18809273 - 18809409
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    ||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||   ||||||||||| |          
T  18809273 tattactccctccatcccatattaaatgatctagttgagttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaa 18809372  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||| ||||||||||||||| ||||    
T  18809373 aattatgaaaacttaacattttaaaaatattcatcga 18809409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 11854521 - 11854653
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact--nnnn 391  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||||||| |          
T  11854521 tattactccctccgtcccatattaaacgatctagttgacttcgacacacgtaccaatgcatatattttatttttgatatcttcaattctctattaaaaaa 11854620  T
Q  392 nnnttatgaaaacttaatattttaaaaatattc 424  Q
       ||||||||||||||||||||||||||||||    
T  11854621 aaattatgaaaacttaatattttaaaaatattc 11854653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 424
Target Start/End: Original strand, 44123673 - 44123801
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||| ||||||| ||||||| ||||| ||||||||| ||||||||||| |||||| |||||||||||||||| |   |||||||||||||        |    
T  44123673 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctactaaaaaaaat 44123772  T
Q  396 tatgaaaacttaatattttaaaaatattc 424  Q
    |||||||| ||||||||||||||||||||    
T  44123773 tatgaaaatttaatattttaaaaatattc 44123801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 12893531 - 12893664
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    |||| ||||||||  ||| || || |||||||||||| ||||||||||| |||||| ||||||||||||||||||   |||||||||||||        |    
T  12893531 tacttcctccgtcctataatagatcatttagttgactccgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 12893630  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  12893631 tatgaaaatttaatattttaaaaatattcatcga 12893664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 424
Target Start/End: Original strand, 25256344 - 25256461
Alignment:
Q  310 gtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaactt 406  Q
    |||||||| |||||||| ||||||||| ||||||   |||||||||  |||||||||||||||||   |||||||||||||       ||||||||||||    
T  25256344 gtctcatactaaatgatctagttgactccgacacttataccaatgcaaatgttttatctttgatatcttcaattctctactaaaaaaattatgaaaactt 25256443  T
Q  407 aatattttaaaaatattc 424  Q
     |||||||||||||||||    
T  25256444 gatattttaaaaatattc 25256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 45253749 - 45253882
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgac-acacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnt 395  Q
    ||||||||| ||| | || || ||||| ||||||||| |||| |||||||||||||| |||||||||| |||||||   ||||||||||||        |    
T  45253749 tactccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttatttttgatatcttcaattctctacaaaaaaaat 45253848  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  45253849 tatgaaaatttaatattttaaaaatattcatcga 45253882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 40013651 - 40013727
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| | || |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  40013651 tactccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 40013727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 13138374 - 13138260
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatatttt 414  Q
    |||||||  |||||||||  ||||||||||||||||| ||||||||||||||||||   |||||||||||||        |||| |||| ||||||||||    
T  13138374 taaatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatatttt 13138275  T
Q  415 aaaaatattcttcga 429  Q
    |||||||||| ||||    
T  13138274 aaaaatattcatcga 13138260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 29790941 - 29791075
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnn 394  Q
    |||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||            
T  29790941 ttactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaa 29791040  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||| |||| |||||||||||||||||||| ||||    
T  29791041 ttataaaaatttaatattttaaaaatattcatcga 29791075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 886298 - 886252
Alignment:
Q  330 gttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  886298 gttgactccgacacacgtaccaatgcatatgttttatctttgatatc 886252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 8351141 - 8351008
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||||||||||| |  | ||| |||| |||||||||  ||||||||||||| ||| ||||||||||||||||||   |||||||||||||        |    
T  8351141 tactccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 8351042  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||| |||| |||||||||||||||||||| ||||    
T  8351041 tataaaaatttaatattttaaaaatattcatcga 8351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 43066146 - 43066259
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatatttta 415  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||| ||||       |||| |||| |||||||||||    
T  43066146 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttactaaaaaaattataaaaatttaatatttta 43066245  T
Q  416 aaaatattcttcga 429  Q
    ||||||||| ||||    
T  43066246 aaaatattcatcga 43066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 3293363 - 3293287
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||| |||||||||  ||||||  ||||||||| ||||||||||||||||||||    
T  3293363 tactccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatctttgatatc 3293287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 38845200 - 38845276
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  38845200 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 38845276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 429
Target Start/End: Complemental strand, 1581027 - 1580893
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnn 394  Q
    |||||||||||||| |  | |||||||  |||||||||  |||||||||| |||||| ||| ||||||||||||||   |||||||||||||            
T  1581027 ttactccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctactaaaaaaat 1580928  T
Q  395 ttatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||| |||| |||||||||||||||||||| ||||    
T  1580927 ttataaaaatttaatattttaaaaatattcatcga 1580893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 6470873 - 6470978
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaaaatatt 423  Q
    |||||||||  |||||||||| |||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||||||||    
T  6470873 tagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaattataaaaatttaatattttaaaaatatt 6470972  T
Q  424 cttcga 429  Q
    | ||||    
T  6470973 catcga 6470978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 45081810 - 45081888
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | ||||| |  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  45081810 attactccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 45081888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 23764694 - 23764637
Alignment:
Q  319 taaatgatttagttgacttcgacaca-cgtaccaatgcgtatgttttatctttgatat 375  Q
    ||||| || ||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  23764694 taaataatctagttgacttcgacacaacgtaccaatgcatatgttttatatttgatat 23764637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 10657986 - 10658054
Alignment:
Q  308 ccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||| |||| | |||| |||||||||| ||||||| |||||||  | ||||||||||||||||||||    
T  10657986 ccgtcttatatcagatgacttagttgactccgacacatgtaccaacacatatgttttatctttgatatc 10658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 14847238 - 14847286
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  14847238 tagttgattccgacacacgcaccaatgcatatgttttatctttgatatc 14847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 30289924 - 30290000
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  |||| || ||||||||| ||||||||||||||||||||    
T  30289924 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatctttgatatc 30290000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 30380530 - 30380606
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | ||| |||| || ||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  30380530 tactccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatctttgatatc 30380606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 424
Target Start/End: Original strand, 14522402 - 14522508
Alignment:
Q  322 atgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnttatgaaaacttaatattttaaa 417  Q
    ||||| ||||||| ||  ||||||||| |||||| ||||||||||||||||||   |||||||||||||        |||| |||| |||||||||||||    
T  14522402 atgatctagttgattttaacacacgtatcaatgcatatgttttatctttgatatcttcaattctctactaaaaaaatttataaaaatttaatattttaaa 14522501  T
Q  418 aatattc 424  Q
    |||||||    
T  14522502 aatattc 14522508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 38739654 - 38739733
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||    | |||||||  |||||||||  ||||||| ||||||||| |||||||||||||| |||||    
T  38739654 tattactccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatc 38739733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 2986339 - 2986408
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctt 369  Q
    |||||||||||||||  | ||| |||  |||||||||  ||||||| ||||||||| |||||||||||||    
T  2986339 tactccctccgtctctgaataagtgacctagttgactctgacacacataccaatgcatatgttttatctt 2986408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 2805737 - 2805661
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||   ||||||||  |||| || ||||||||| ||||||||||||||||||||    
T  2805737 tactccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatctttgatatc 2805661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 37709899 - 37709975
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||   |||||| ||||||||  ||||||||||||||||||||    
T  37709899 tactccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatctttgatatc 37709975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 25163161 - 25163297
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnn 392  Q
    |||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||   ||||||||||  |          
T  25163161 tattactctcttcgtctcatattaaatgatctagttgatttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctgttaaaaaa 25163260  T
Q  393 nnttatgaaaacttaatattttaaaaatattcttcga 429  Q
      |||||||||||||||||||||||||||||| ||||    
T  25163261 aattatgaaaacttaatattttaaaaatattcatcga 25163297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 33121542 - 33121675
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctcta-ctnnnnnnnt 395  Q
    ||||||||||||| | || |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |        |    
T  33121542 tactccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctaccaaaaaaaat 33121641  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    |||||||| |||||||||||||||||||| ||||    
T  33121642 tatgaaaatttaatattttaaaaatattcatcga 33121675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 29403641 - 29403720
Alignment:
Q  297 tattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||||||   || ||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  29403641 tattactctctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatctttgatatc 29403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 13207219 - 13207138
Alignment:
Q  295 cttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||| |||||||  | |||| ||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  13207219 cttattactctctccgtcctacattagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatc 13207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 7098134 - 7098058
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |    |||||||| |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  7098134 ttattactccctccgtccc----taaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatc 7098058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 643692 - 643559
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctact-nnnnnnnt 395  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||   |||||||||||||        |    
T  643692 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctactaaaaaaaat 643593  T
Q  396 tatgaaaacttaatattttaaaaatattcttcga 429  Q
    ||| |||| |||||||||||||||||||| ||||    
T  643592 tataaaaatttaatattttaaaaatattcatcga 643559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 421
Target Start/End: Original strand, 8796046 - 8796174
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc---aattctctactnnnnn 392  Q
    ||||||||| ||||||| |  | ||||| || |||||||||  ||||||| ||||||||  ||||||||||||||||||||   |||||||||||         
T  8796046 ttattactcactccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatctttgatatctttaattctctactaaaaa 8796145  T
Q  393 nnttatgaaaacttaatattttaaaaata 421  Q
      |||| |||| |||||||||||||||||    
T  8796146 aattataaaaatttaatattttaaaaata 8796174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 429
Target Start/End: Original strand, 18991932 - 18992036
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnnttatgaaaacttaatattttaaaaatattc 424  Q
    |||||||||  ||||||||||||||||| |||||||||| |||||||   |||||| ||||||       |||| |||| ||||||||||||||||||||    
T  18991932 tagttgactctgacacacgtaccaatgcatatgttttatttttgatatcttcaattttctactaaaaaaattataaaaatttaatattttaaaaatattc 18992031  T
Q  425 ttcga 429  Q
     ||||    
T  18992032 atcga 18992036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 25435431 - 25435487
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  25435431 taaatgatctagttgactt-gacacacataccaatgcatatgttttatctttgatatc 25435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 11114563 - 11114641
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||  ||||||| |  ||||||| ||||||||| ||||||||||||||||||||    
T  11114563 attactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatc 11114641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 22020295 - 22020352
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  22020295 taaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 22020352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 29986391 - 29986343
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  29986391 tagttgactctgacacacataccaatgcatatgttttatctttgatatc 29986343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 420
Target Start/End: Complemental strand, 19069029 - 19068908
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgata---tcaattctctactnnnnnnntt 396  Q
    ||||| |||||||  || ||| |||| |||||| ||| ||| |||||||||||| | ||| ||||||||||||||   ||| |||||||||       ||    
T  19069029 tactctctccgtccgattttagatgacttagttaactccgatacacgtaccaatacatatattttatctttgatatcttcagttctctact--aaaaatt 19068932  T
Q  397 atgaaaacttaatattttaaaaat 420  Q
    ||||||||||||||||||||||||    
T  19068931 atgaaaacttaatattttaaaaat 19068908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 16434791 - 16434713
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| ||||||| ||||  |||||||||  ||||| | ||||||||| ||| | |||||||| |||||    
T  16434791 attactccctccgtcccatattagatgaactagttgactcagacactcataccaatgcatatttcttatctttaatatc 16434713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 31854816 - 31854894
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||   ||||||||  || |||| ||||||||| ||||||||||||||||||||    
T  31854816 attactccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatctttgatatc 31854894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 24150760 - 24150817
Alignment:
Q  319 taaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||  |||||||||  ||||||| ||||||||| ||| ||||||||||||||||    
T  24150760 taaatgacctagttgactctgacacacataccaatgcatatattttatctttgatatc 24150817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 30237193 - 30237242
Alignment:
Q  328 tagttgacttcgacacacgtaccaatgcgtatg-ttttatctttgatatc 376  Q
    |||||||||  ||||||||||||||||| |||| ||||||||||||||||    
T  30237193 tagttgactctgacacacgtaccaatgcatatgtttttatctttgatatc 30237242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 38606 - 38545
Alignment:
Q  315 atattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  38606 atattagatgatttagttgacttcgacatacgtaccaatgcatatgttttatctttgatatc 38545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 41480 - 41402
Alignment:
Q  298 attactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||| |  | |||||||  |||||||||  ||||||| ||||||||| ||||||||||||||||||||    
T  41480 attactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatc 41402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 14055 - 14135
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  || |||||||||||||| ||||||||||||||||||||    
T  14055 ttattactccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatctttgatatc 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 10389 - 10469
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  ||||||| ||| ||||| ||||||||||||||||||||    
T  10389 ttattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatc 10469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 117320 - 117397
Alignment:
Q  299 ttactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    |||||||||||||| |  | |||||||| |||||||||  ||||||| || |||||| |||||||||||||| |||||    
T  117320 ttactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatctttaatatc 117397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 12748 - 12828
Alignment:
Q  296 ttattactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||||||| |  | ||| |||  |||||||||  ||||||| ||| ||||| ||||||||||||||||||||    
T  12748 ttattactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatc 12828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 44369 - 44293
Alignment:
Q  300 tactccctccgtctcatattaaatgatttagttgacttcgacacacgtaccaatgcgtatgttttatctttgatatc 376  Q
    ||||||||||||| |  | |||||||  |||||||||  ||||| | ||||||||| ||||||||||||||||||||    
T  44369 tactccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatctttgatatc 44293  T

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