View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_high_53 (Length: 340)
Name: NF7337_high_53
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_high_53 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 58 - 330
Target Start/End: Complemental strand, 33931969 - 33931697
Alignment:
| Q |
58 |
tttggctttgtttctttgttgtgattcaagtttgacattgtactcataattgataatgccaacatctacttgacttctataacgcatgtgtctaatcaag |
157 |
Q |
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| T |
33931969 |
tttggctttgtttctttgttgtgattcaagtttgacattgtactcataattgataatgccaacatctacttgacttctataacgcatgtgtctaatcaag |
33931870 |
T |
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| Q |
158 |
agaaagatgaagataactcagatgtttccgagagagattgtggttcttatttgttcaaaggggtggttttcataagagaagggcccttctttgttctcat |
257 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33931869 |
agaaagatgaagataactcagatgttttcgagagagattgtggttcttatttgttcaaaggggtggttttcataagagaagggcccttctttgttctcat |
33931770 |
T |
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| Q |
258 |
acagaatattagggatttcaaaaattgaagtgatacttttatgtggatatagattaaatcattattacttctt |
330 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
33931769 |
acagaattttagggatttcaaaaattgaagtgatacttttatgtggatatagattaaataattattacttctt |
33931697 |
T |
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