View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_high_61 (Length: 295)
Name: NF7337_high_61
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_high_61 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 2655161 - 2655444
Alignment:
| Q |
1 |
accatttttcaggaaaatatcaccaaaggaatcaaaactttaccac-aaaattttctctatttttcacaacatgatttcatgaatctaaagacaagactg |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
2655161 |
accatttttcaggaaaatatcaccaaaggaatcaaaactttaccaccaaaattttctctatttttcacaacatgatttcatgaatctaaagacaagaccg |
2655260 |
T |
|
| Q |
100 |
gttttaccggaatgcttctaagaccattaagaataataataagacatcaaatcacatcttacataggtcctaggcgatca-------tttcaccannnnn |
192 |
Q |
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|||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2655261 |
gtttcaccgcaatgcttctgagaccattaagaataataataagacatcaaatcacatcttacataggtcctaggcgatcaagaccggtttcaccattttt |
2655360 |
T |
|
| Q |
193 |
nngagtgaaggtaaggaagttttagaatcggtgttgagttttgtattggagaaactctatttgcaacccatacataggtcctag |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2655361 |
ttgagtgaaggtaaggaagttttagaatcggtgttgagttttgtattggagaaactctatttgcaacccatacataggtcctag |
2655444 |
T |
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