View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_high_78 (Length: 249)
Name: NF7337_high_78
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_high_78 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 35211537 - 35211317
Alignment:
| Q |
5 |
ccctgagaactaacccaggagtgctctgggctttatggttagcatatttatgtctaatagaacatacctatcttccctcggaaagatgacattgacaata |
104 |
Q |
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| T |
35211537 |
ccctgatagctaacccaagagtgctctgggctttatgtttatcatatttatgtctaatagaacatacctatcttccctcggaaagatgacattgacaata |
35211438 |
T |
|
| Q |
105 |
gatgagcagaaatattcactctgaatattcagtattagtgcctcttagtttaatgtttctttatgcagctaggttttttagctcataaattataaacaaa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35211437 |
gatgagcagaaatattcactctgaatattcagtattagtgcctcttagtttaatgtttctttatgcagctaggttttttagctcataaattataaacaaa |
35211338 |
T |
|
| Q |
205 |
gctattaatttaccatttctg |
225 |
Q |
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||||||||||||||||||||| |
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| T |
35211337 |
gctattaatttaccatttctg |
35211317 |
T |
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