View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_high_86 (Length: 243)
Name: NF7337_high_86
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_high_86 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10793584 - 10793810
Alignment:
| Q |
1 |
gtgtatctttatattgcattggatgccacatcaatttgtttttatgtttaaataataaactcaattaacactaccttcttaggccctaacaattgagaca |
100 |
Q |
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| T |
10793584 |
gtgtatctttatattgcattggatgccacatcaatttgttattatgtttaaataacaaactcaattaacactaccttcttaggccctaacaattgagaca |
10793683 |
T |
|
| Q |
101 |
aaactaaattatagtttgataataaggagaattagttgggataataagaaggttaattcaataataagcaagtgatgtatgactttgatgactcaaaagc |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10793684 |
aaactaaattatagtatgataataaggagaattagttgggataataagaaggttaattcaataataagcaagtgatgtatgactttgatgactcaaaagc |
10793783 |
T |
|
| Q |
201 |
tccaaatgcgggtaatgtcgtaaggac |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
10793784 |
tccaaatgcgggtaatgtcgtaaggac |
10793810 |
T |
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