View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_low_108 (Length: 218)
Name: NF7337_low_108
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_low_108 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 39062656 - 39062871
Alignment:
| Q |
1 |
atccttcatattttcctagtcttctaattgagtgctttcattgcattgttctttccatgggaccctagcaaccatccataaaacttccttaagctctcta |
100 |
Q |
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| T |
39062656 |
atccttcatatttttctagtcttctaattgagtgctttcattgcattgttctttccatgggaccctagcaaccacccataaaacttccttaagctct--a |
39062753 |
T |
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| Q |
101 |
ttctaggatatttatctcatcaattgccatataaatgtttcacacacaacctttgctcacatgatgtccaatatcttgaattacagacattataatagtg |
200 |
Q |
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| T |
39062754 |
ttctaggatatttatctcatcaattgccatataaatgtttcacacacaacctttgctcacatgatgtccaatatcttgaattacagacattataatagtg |
39062853 |
T |
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| Q |
201 |
tagatgaactaatataat |
218 |
Q |
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|||||||||||||||||| |
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| T |
39062854 |
tagatgaactaatataat |
39062871 |
T |
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