View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_low_36 (Length: 450)
Name: NF7337_low_36
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Complemental strand, 32875391 - 32874949
Alignment:
| Q |
1 |
caaccaaaccaaaattaatgcacattacatgaagatgctaaacatgatttaaattgtagctcaatgaaacataaggtgatttggtgggtttgaaagttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875391 |
caaccaaaccaaaattaatgcacattacatgaagatgctaaacatgatttaaattgtagctcaatgaaacataaggtgatttggtgggtttgaaagttca |
32875292 |
T |
|
| Q |
101 |
agtgatagaatgttatgtgatcaatttttcctgctaacaaaattacaactaaaatttactataagaaaaaattatgatttatgcaattgtgccggcaatg |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875291 |
agtgatagaatgttatgtgattaatttttcctgctaacaaaattacaactaaaatttactataagaaaaaattatgatttatgcaattgtgccggcaatg |
32875192 |
T |
|
| Q |
201 |
aaagatattttgaagcattaacaatcttagagtcacannnnnnncatttaaaatatttcttaataactatacttaccattgtgtagaaagtcctgagatc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875191 |
aaagatattttgaagcattaacaatcttagagtcacatttttttcatttaaaatatttcttaataactatacttaccattgtgtagaaagtcctgagatc |
32875092 |
T |
|
| Q |
301 |
atcaccaccaacattaacccttggacgattaactagttgagagggtttcattatacatccattgctaatctctctgttgttgatgagagcactcaaagat |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32875091 |
atcaccaccaacattaacccttggacgattaactagttgagagggtttcattatacatccattgctaatctctctgttattgatgagagcactcaaagat |
32874992 |
T |
|
| Q |
401 |
acagaatttgtaaaagggctcaaaacatctcctataacaccaa |
443 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32874991 |
acagaatttgtaaaagggctcaaaacatctcctataacaccaa |
32874949 |
T |
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