View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7337_low_50 (Length: 376)
Name: NF7337_low_50
Description: NF7337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7337_low_50 |
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Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 303095 - 303386
Alignment:
| Q |
1 |
tccttttcaactatactcaaggccaccactcaattagggagagtgaaaacattggttatcaaacatgtctaat-tgattcttgtgacctatcttcaatga |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
303095 |
tccttttcaactatactcaaggccaccactcaattagggagagtgaaaacattggttatcaaacatgtctaatatgattcttgtgacctatcttcaatga |
303194 |
T |
|
| Q |
100 |
aatatccattataatttggtcatttgacattgccaaacaacctaaaagaaaaagttgtgtgttctagtatatgtatgtgaatttttgtctcagtttattt |
199 |
Q |
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|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
303195 |
aatatccattattatttggtcatttgacattgtcaaacaacctaaaagaaaaagttgtgtgttctagtttatgtatgtgaatttttgtctcagtttattt |
303294 |
T |
|
| Q |
200 |
aacatcattaactatgtagacttaatttgttttatttaataaatagcgggggaatgaaacagttaaagtatataaaaagtcattctcttgttac |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||| |
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| T |
303295 |
aacatcattaactatgtagacttaatttgttttatttaataaatagcgggggaataaaacggtt--agtatataaaaagtcattctcttattac |
303386 |
T |
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