View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7339_low_11 (Length: 253)

Name: NF7339_low_11
Description: NF7339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7339_low_11
NF7339_low_11
[»] chr6 (24 HSPs)
chr6 (18-237)||(12270569-12270789)
chr6 (137-237)||(5874112-5874222)
chr6 (138-237)||(10590863-10590962)
chr6 (138-239)||(5287875-5287976)
chr6 (138-237)||(35040186-35040280)
chr6 (18-73)||(5866946-5867001)
chr6 (141-237)||(15859738-15859842)
chr6 (183-233)||(13801998-13802048)
chr6 (183-233)||(13810885-13810935)
chr6 (139-237)||(10494343-10494451)
chr6 (160-236)||(9686071-9686147)
chr6 (183-231)||(33550338-33550386)
chr6 (140-237)||(25136784-25136886)
chr6 (138-237)||(10390992-10391092)
chr6 (160-239)||(6266914-6266993)
chr6 (168-236)||(24644954-24645021)
chr6 (168-239)||(14940573-14940644)
chr6 (138-196)||(33550383-33550441)
chr6 (203-236)||(19135148-19135181)
chr6 (203-236)||(22413851-22413884)
chr6 (170-235)||(29048141-29048206)
chr6 (204-237)||(30752543-30752576)
chr6 (203-239)||(892377-892413)
chr6 (160-196)||(28610676-28610712)
[»] chr7 (37 HSPs)
chr7 (18-239)||(11206208-11206430)
chr7 (18-237)||(12117612-12117837)
chr7 (18-237)||(3213062-3213292)
chr7 (18-237)||(47069681-47069911)
chr7 (18-237)||(47204297-47204527)
chr7 (18-237)||(10671833-10672062)
chr7 (138-237)||(27054703-27054802)
chr7 (138-237)||(32823617-32823715)
chr7 (105-236)||(31982933-31983065)
chr7 (18-104)||(8768857-8768943)
chr7 (138-239)||(24361465-24361566)
chr7 (165-233)||(7209267-7209335)
chr7 (138-237)||(13852321-13852425)
chr7 (159-237)||(8768950-8769033)
chr7 (138-237)||(36507959-36508058)
chr7 (166-237)||(47903260-47903331)
chr7 (138-236)||(24361259-24361357)
chr7 (138-230)||(18673161-18673253)
chr7 (138-237)||(31876606-31876700)
chr7 (146-232)||(1335335-1335426)
chr7 (183-234)||(43429191-43429242)
chr7 (183-239)||(10069204-10069260)
chr7 (186-237)||(5932708-5932759)
chr7 (138-232)||(48675129-48675228)
chr7 (138-215)||(11216189-11216266)
chr7 (138-205)||(22366500-22366567)
chr7 (166-226)||(7760123-7760188)
chr7 (166-237)||(2408960-2409036)
chr7 (203-232)||(2308151-2308180)
chr7 (203-236)||(31287815-31287848)
chr7 (168-236)||(524867-524935)
chr7 (152-196)||(10338791-10338835)
chr7 (168-236)||(20334597-20334665)
chr7 (203-239)||(32942115-32942151)
chr7 (203-239)||(33434122-33434158)
chr7 (203-239)||(40848861-40848897)
chr7 (203-239)||(48642790-48642826)
[»] chr2 (21 HSPs)
chr2 (18-239)||(9811401-9811623)
chr2 (18-237)||(36413480-36413710)
chr2 (18-237)||(16578648-16578878)
chr2 (138-237)||(44979740-44979839)
chr2 (141-239)||(25298225-25298323)
chr2 (138-239)||(11375912-11376013)
chr2 (138-237)||(18356916-18357015)
chr2 (138-236)||(42785595-42785698)
chr2 (138-239)||(17916827-17916923)
chr2 (183-237)||(44035319-44035373)
chr2 (18-73)||(42785214-42785269)
chr2 (152-229)||(1331030-1331107)
chr2 (183-232)||(19937141-19937190)
chr2 (138-227)||(34910332-34910424)
chr2 (152-236)||(41461095-41461184)
chr2 (176-239)||(12041598-12041661)
chr2 (203-239)||(17762752-17762788)
chr2 (192-230)||(44986082-44986120)
chr2 (203-236)||(5862667-5862700)
chr2 (152-237)||(15320564-15320649)
chr2 (160-196)||(42350789-42350825)
[»] chr5 (28 HSPs)
chr5 (18-237)||(30002024-30002243)
chr5 (18-237)||(27886266-27886486)
chr5 (18-239)||(667464-667686)
chr5 (18-237)||(11917418-11917648)
chr5 (18-237)||(15068473-15068703)
chr5 (18-239)||(701230-701462)
chr5 (18-236)||(8409004-8409231)
chr5 (138-237)||(42544671-42544770)
chr5 (105-239)||(30265728-30265863)
chr5 (166-237)||(12166163-12166234)
chr5 (165-237)||(10174098-10174170)
chr5 (138-237)||(35358949-35359053)
chr5 (138-232)||(2226850-2226949)
chr5 (138-232)||(9161001-9161100)
chr5 (166-228)||(12681068-12681130)
chr5 (138-237)||(38433710-38433814)
chr5 (138-229)||(333248-333339)
chr5 (138-237)||(17085208-17085307)
chr5 (183-237)||(36177121-36177175)
chr5 (183-236)||(36103627-36103680)
chr5 (105-225)||(32521154-32521280)
chr5 (18-105)||(35359344-35359431)
chr5 (183-228)||(9988876-9988921)
chr5 (168-236)||(36567735-36567803)
chr5 (152-196)||(41454927-41454971)
chr5 (138-196)||(36177066-36177124)
chr5 (203-239)||(2588985-2589021)
chr5 (152-196)||(27572020-27572064)
[»] chr4 (41 HSPs)
chr4 (18-236)||(36077586-36077805)
chr4 (18-237)||(29636786-29637016)
chr4 (18-237)||(50570798-50571028)
chr4 (18-237)||(42557737-42557966)
chr4 (82-237)||(29644029-29644195)
chr4 (138-237)||(30193946-30194045)
chr4 (141-236)||(23937492-23937587)
chr4 (141-237)||(5261938-5262034)
chr4 (138-237)||(48996097-48996196)
chr4 (138-236)||(43630591-43630689)
chr4 (138-237)||(40900049-40900153)
chr4 (138-227)||(8176568-8176657)
chr4 (138-227)||(52344755-52344844)
chr4 (138-237)||(32136705-32136809)
chr4 (138-237)||(40806784-40806888)
chr4 (138-227)||(51394736-51394830)
chr4 (138-227)||(6333334-6333433)
chr4 (168-236)||(23449985-23450053)
chr4 (18-73)||(5261556-5261611)
chr4 (154-237)||(45983396-45983479)
chr4 (152-235)||(48602504-48602587)
chr4 (168-237)||(48293406-48293475)
chr4 (141-196)||(10218742-10218797)
chr4 (29-68)||(51395162-51395201)
chr4 (183-237)||(23120273-23120327)
chr4 (191-231)||(13690872-13690912)
chr4 (155-235)||(29232767-29232847)
chr4 (152-239)||(36106399-36106492)
chr4 (183-239)||(48338351-48338407)
chr4 (191-237)||(10218691-10218737)
chr4 (183-225)||(35233314-35233356)
chr4 (165-236)||(4688690-4688766)
chr4 (203-239)||(14866787-14866823)
chr4 (152-196)||(15723945-15723989)
chr4 (152-196)||(18319546-18319590)
chr4 (152-196)||(18399091-18399135)
chr4 (152-196)||(23625876-23625920)
chr4 (170-198)||(28147836-28147864)
chr4 (168-236)||(41325109-41325172)
chr4 (183-227)||(51907085-51907129)
chr4 (160-196)||(54274008-54274044)
[»] scaffold0308 (1 HSPs)
scaffold0308 (18-237)||(5733-5953)
[»] chr3 (25 HSPs)
chr3 (18-237)||(51149508-51149727)
chr3 (18-237)||(34794607-34794826)
chr3 (18-239)||(35402050-35402277)
chr3 (18-235)||(33360968-33361196)
chr3 (18-239)||(10369222-10369454)
chr3 (81-237)||(4669550-4669717)
chr3 (138-237)||(6004358-6004457)
chr3 (138-225)||(9827749-9827836)
chr3 (161-237)||(48032843-48032918)
chr3 (138-237)||(32880313-32880412)
chr3 (138-237)||(21586814-21586913)
chr3 (138-237)||(50562541-50562640)
chr3 (18-72)||(4669439-4669493)
chr3 (183-236)||(43030430-43030483)
chr3 (152-236)||(38651974-38652058)
chr3 (152-236)||(55467622-55467711)
chr3 (18-69)||(9817759-9817810)
chr3 (188-239)||(39097959-39098010)
chr3 (152-196)||(20038443-20038487)
chr3 (152-236)||(45915189-45915272)
chr3 (152-236)||(51191718-51191807)
chr3 (138-196)||(43030485-43030543)
chr3 (203-236)||(54122034-54122067)
chr3 (203-235)||(26291992-26292024)
chr3 (138-222)||(35532122-35532201)
[»] chr8 (20 HSPs)
chr8 (17-237)||(5803085-5803316)
chr8 (18-237)||(3006413-3006642)
chr8 (138-237)||(10661166-10661265)
chr8 (165-239)||(44672799-44672873)
chr8 (141-237)||(36910306-36910401)
chr8 (138-227)||(18169991-18170085)
chr8 (138-236)||(14549237-14549345)
chr8 (142-227)||(3681950-3682035)
chr8 (138-227)||(18633558-18633653)
chr8 (187-237)||(33068278-33068328)
chr8 (160-222)||(38926419-38926481)
chr8 (168-237)||(7428434-7428503)
chr8 (192-239)||(6200878-6200925)
chr8 (168-232)||(12660257-12660321)
chr8 (203-239)||(44336783-44336819)
chr8 (152-239)||(28073176-28073263)
chr8 (152-193)||(12193443-12193484)
chr8 (152-193)||(12437871-12437912)
chr8 (183-232)||(31497615-31497664)
chr8 (152-196)||(9012817-9012861)
[»] chr1 (29 HSPs)
chr1 (18-237)||(8211291-8211523)
chr1 (18-196)||(5155173-5155352)
chr1 (18-239)||(20493759-20493994)
chr1 (138-237)||(33474460-33474559)
chr1 (18-110)||(29707951-29708043)
chr1 (138-239)||(45691808-45691914)
chr1 (138-237)||(1161713-1161812)
chr1 (138-237)||(51252386-51252485)
chr1 (138-226)||(42789579-42789667)
chr1 (183-237)||(32954050-32954104)
chr1 (138-237)||(29389045-29389149)
chr1 (183-237)||(5155359-5155413)
chr1 (183-237)||(39256652-39256706)
chr1 (138-227)||(44918565-44918659)
chr1 (183-237)||(16529516-16529570)
chr1 (138-228)||(11899027-11899127)
chr1 (160-196)||(33769936-33769972)
chr1 (152-239)||(16537822-16537909)
chr1 (183-237)||(33910797-33910852)
chr1 (138-196)||(32954106-32954164)
chr1 (138-194)||(24911020-24911076)
chr1 (151-194)||(26345032-26345075)
chr1 (155-230)||(27507479-27507554)
chr1 (138-196)||(16529461-16529519)
chr1 (152-196)||(11074374-11074418)
chr1 (152-196)||(17651815-17651859)
chr1 (138-190)||(33910742-33910794)
chr1 (152-236)||(34914147-34914231)
chr1 (152-196)||(40095396-40095440)
[»] scaffold0029 (1 HSPs)
scaffold0029 (138-232)||(40541-40640)
[»] scaffold0059 (1 HSPs)
scaffold0059 (183-237)||(69556-69610)
[»] scaffold0013 (2 HSPs)
scaffold0013 (183-237)||(106042-106096)
scaffold0013 (138-237)||(128649-128758)
[»] scaffold0204 (1 HSPs)
scaffold0204 (183-239)||(25873-25929)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 12270789 - 12270569
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  12270789 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 12270690  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12270689 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 12270590  T
Q  217 cgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||    
T  12270589 cgaaccaaaccaaaccgcatg 12270569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 5874112 - 5874222
Alignment:
Q  137 atttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaac 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  5874112 atttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaac 5874211  T
Q  227 caaaccgcatg 237  Q
    |||||||||||    
T  5874212 caaaccgcatg 5874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 10590962 - 10590863
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||| ||| |||||||  ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10590962 tttatctcgtgataaaccgcacaaaccgaaccaatccaagccgcattggtttggttgggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 10590863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 5287875 - 5287976
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||| ||||| |||||||  ||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5287875 tttatcttgcgataaaccgcactaaccgaaccaatccaagccgtattggtttcgtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatg 5287974  T
Q  238 tt 239  Q
    ||    
T  5287975 tt 5287976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 35040186 - 35040280
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||||     |||||||||||||||||||||||||| |||||||||||||||||||    
T  35040186 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattgg-----tttggatgactttttaaaaatcaaccaaaccaaaccaaaccgcatg 35040280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 5866946 - 5867001
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttc 73  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5866946 attttagataaataacttttatttgtattgtaatgctattttggaacttcaagttc 5867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 15859842 - 15859738
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt--------ttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||| |||||||||||    
T  15859842 atctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtggtttggtttggatgactatttaaaaatcaaccgaatcaaaccaaacc 15859743  T
Q  233 gcatg 237  Q
    |||||    
T  15859742 gcatg 15859738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 13801998 - 13802048
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccg 233  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13801998 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccg 13802048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 13810885 - 13810935
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccg 233  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13810885 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccg 13810935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 10494343 - 10494451
Alignment:
Q  139 ttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggttt----------ggatgactttttaaaaatcaaccgaaccaaacca 228  Q
    |||||||||||| |||||||||||| ||||||||| || |||||||||||| ||||          ||||||||||||||||||||||||||||||| ||    
T  10494343 ttatctcgcgataaaccgcatcaaccgaaccaatctaagccgcattggtttagtttggtttagtttggatgactttttaaaaatcaaccgaaccaaatca 10494442  T
Q  229 aaccgcatg 237  Q
    |||| ||||    
T  10494443 aaccccatg 10494451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 9686147 - 9686071
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| |||||||||||||||||||||||||| ||||    |||||||| | |||||||||||||||||||||||    
T  9686147 caactgatccaatccaaaccgcattggtttggttcggattttattttaaaagttaaccgaaccaaaccaaaccgcat 9686071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 33550386 - 33550338
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaac 231  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33550386 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaac 33550338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 25136886 - 25136784
Alignment:
Q  140 tatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt-----ttggatgactttttaaaaatcaaccgaaccaaaccaaaccgc 234  Q
    ||||| ||||| |||||||  ||| ||||||||| |||| |||||||||||||     ||||||||||||||||||  ||||||||||||||| ||||||    
T  25136886 tatcttgcgataaaccgcacaaaccgaaccaatctaaactgcattggtttggtttggtttggatgactttttaaaatccaaccgaaccaaaccgaaccgc 25136787  T
Q  235 atg 237  Q
    |||    
T  25136786 atg 25136784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 10390992 - 10391092
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgac-tttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||| ||| |||||||  | | |||||||||||| || | ||||||||||||||||||| |||||| |||||||  |||||||||||||| ||||    
T  10390992 tttatctcgtgataaaccgcacaagccgaaccaatccaagccacgttggtttggtttggatgacttttttagaaatcaagtgaaccaaaccaaacagcat 10391091  T
Q  237 g 237  Q
    |    
T  10391092 g 10391092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 6266993 - 6266914
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||| |||||||||||| | |||| ||||||||||| |  | |||||||| ||||||| ||||||||||||||||||||    
T  6266993 caactaaaccaatccaaaacacatttgtttggtttggttttcattttaaaagtcaaccgtaccaaaccaaaccgcatgtt 6266914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 24644954 - 24645021
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||||| |||||||||||||||||||    |||||||| |||| |||| |||||||||||||||    
T  24644954 ccaatccaaactgcattggtttggtttggattttattttaaaagtcaa-cgaatcaaaccaaaccgcat 24645021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 14940573 - 14940644
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||| ||||||||| ||||||||||| ||||    ||| |||| |||||||||||||||||||| |||||||    
T  14940573 ccaacccaaaccgcgttggtttggttcggattttatttaaaaagtcaaccgaaccaaaccaaactgcatgtt 14940644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 33550441 - 33550383
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||| |||||| |||||||  ||  ||| ||||||||||||||||||||||||||||    
T  33550441 tttatcccgcgataaaccgcacaaatcgaatcaatccaaaccgcattggtttggtttgg 33550383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 19135148 - 19135181
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||||||||||||||||||||||||    
T  19135148 ttttaaaagtcaaccgaaccaaaccaaaccgcat 19135181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 22413884 - 22413851
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||||||||||||||||||||||||    
T  22413884 ttttaaaagtcaaccgaaccaaaccaaaccgcat 22413851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 29048206 - 29048141
Alignment:
Q  170 aatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 235  Q
    |||||||| ||||||||||| ||| ||||    |||||||| ||||||||||||||||||| ||||    
T  29048206 aatccaaatcgcattggtttagttcggattttattttaaaagtcaaccgaaccaaaccaaatcgca 29048141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 30752576 - 30752543
Alignment:
Q  204 tttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||| ||||||||||||||||||||||||||    
T  30752576 tttaaaagtcaaccgaaccaaaccaaaccgcatg 30752543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 892377 - 892413
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| | ||||||||||||||||||||||||||    
T  892377 ttttaaaagttaaccgaaccaaaccaaaccgcatgtt 892413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 28610712 - 28610676
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||| |||||||||||||||||||| |||||||||||    
T  28610712 caaccgaaccaatccaaaccgcattagtttggtttgg 28610676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 11206208 - 11206430
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||    
T  11206208 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgtttggtactagttggcaatatt 11206307  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11206308 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 11206407  T
Q  217 cgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||||||||    
T  11206408 cgaaccaaaccaaaccgcatgtt 11206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 12117837 - 12117612
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  12117837 attttagataaataatttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 12117738  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt-----ttggatgactttttaaaaa 211  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  12117737 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaa 12117638  T
Q  212 tcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||| |||||    
T  12117637 tcaaccgaaccaaaccaaactgcatg 12117612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 3213062 - 3213292
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  3213062 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 3213161  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttgg----------tttggatgacttttt 206  Q
    | | |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||    
T  3213162 agacttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttgatttggatgacttttt 3213261  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  3213262 aaaaatcaaccgaaccaaaccaaaccgcatg 3213292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 47069911 - 47069681
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||    
T  47069911 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgtttggtactagttggcaatatt 47069812  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  47069811 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 47069712  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  47069711 aaaaatcaaccgaaccaaaccaaaccgcatg 47069681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 47204297 - 47204527
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  47204297 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 47204396  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgacttttt 206  Q
    | |||||||||||       |||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||    
T  47204397 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaattcaaaccgcattgatttggtttggtttggtttggatgacttttt 47204496  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  47204497 aaaaatcaaccgaaccaaaccaaaccgcatg 47204527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 10672062 - 10671833
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  10672062 attttagataaataacttttattggtattgtaatgctattttgga-cttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 10671964  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  10671963 agagttaatgtaatttttttatttatctcgcgattaactgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 10671864  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  10671863 aaaaatcaaccgaaccaaaccaaaccgcatg 10671833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 27054703 - 27054802
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||| ||| |||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27054703 tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatggctttttaaaaatcaaccgaaccaaaccaaaccgcatg 27054802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 32823715 - 32823617
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32823715 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattgatttggtttggatgactttttaaaaatcaaccgaacc-aaccaaaccgcatg 32823617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 31982933 - 31983065
Alignment:
Q  105 agttggcaatatta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactt 203  Q
    |||||||||||||| |||||||||||        |||||||||| || ||||||| |||| |||||||||||| || | |||||||||||||||||||||    
T  31982933 agttggcaatattagagttaatgtaatatatttttttatctcgcaataaaccgcaccaaccgaaccaatccaacccacgttggtttggtttggatgactt 31983032  T
Q  204 tttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||||||| |||||||||||||| ||||    
T  31983033 tttaaaaatcaactgaaccaaaccaaactgcat 31983065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 8768857 - 8768943
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtact 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||    
T  8768857 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtact 8768943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 24361465 - 24361566
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||  ||| |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||    
T  24361465 tttatctcatgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgatttttttaaaatcaactgaaccaaaccaaaccacatg 24361564  T
Q  238 tt 239  Q
    ||    
T  24361565 tt 24361566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 7209267 - 7209335
Alignment:
Q  165 gaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccg 233  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7209267 gaaccaatccaagacgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccg 7209335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 13852425 - 13852321
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||| ||| |||| ||  ||| ||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  13852425 tttatctcgtgataaacctcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 13852326  T
Q  233 gcatg 237  Q
    |||||    
T  13852325 gcatg 13852321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 8768950 - 8769033
Alignment:
Q  159 tcaactgaaccaatccaaaccgca-----ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||||||||||||||     || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8768950 tcaactgaaccaatccaaaccgcattagtttcgtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 8769033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 36508058 - 36507959
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||| |||| |||  || |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  36508058 tttatctcacgataaacgacaccaaccgaaccaatccaagccgcattggtttggtttggatgactttttaaaaatcaaccgaatcaaatcaaactgcatg 36507959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 47903331 - 47903260
Alignment:
Q  166 aaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47903331 aaccaatccaagtcacattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 47903260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 24361259 - 24361357
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||| ||| |||||||  ||| |||||||||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  24361259 tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgcattagtttggtttggatgattttttttaaattaaccgaaccaaaccaaaccgcat 24361357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 18673161 - 18673253
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaa 230  Q
    ||||||||||||| ||||||| |||| |||||||||||| || ||||| |||||||||||||||||||| ||| ||||| |||| ||||||||    
T  18673161 tttatctcgcgataaaccgcaccaaccgaaccaatccaagccacattgttttggtttggatgactttttgaaattcaactgaactaaaccaaa 18673253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 31876606 - 31876700
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  || |||||||||||||||||||||||||||      |||||||||||||||||||||||||| |||||||| |||||    
T  31876606 tttatctcgcgataaaccgcacaaattgaaccaatccaaaccgcattggtttga-----atgactttttaaaaatcaaccgaaccgaaccaaactgcatg 31876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 1335426 - 1335335
Alignment:
Q  146 gcgattaaccgcatcaactgaaccaatccaaaccgcattg-----gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||| ||||||| |||| |||| ||||||| ||||||||     |||||||||||| ||||||||||||||||||||||||||||||||||    
T  1335426 gcgataaaccgcaccaaccgaactaatccaagccgcattgatttggtttggtttggaggactttttaaaaatcaaccgaaccaaaccaaacc 1335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 43429242 - 43429191
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgc 234  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43429242 ttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgc 43429191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 10069260 - 10069204
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  10069260 ttggtttggtttgaatgactttttaaaaatcaaccgaatcaaaccaaacagcatgtt 10069204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 5932759 - 5932708
Alignment:
Q  186 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  5932759 gtttggtttggatgactttttaaaaatcaacttaaccaaaccaaaccgcatg 5932708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 48675228 - 48675129
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||  ||| ||||| |||||| |||||||| ||||||||||     ||||||| ||||||||||||||||||||| ||||||    
T  48675228 tttatctcgcgataaaccgcacaaaccgaaccgatccaagccgcattgatttggtttggcttggatgacttcttaaaaatcaaccgaaccaaatcaaacc 48675129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 11216266 - 11216189
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaa 215  Q
    ||||||||||||| ||| || |||| ||||||||| ||||| |||||| |||||||||||  ||||||||||||||||    
T  11216266 tttatctcgcgataaactgcgtcaattgaaccaattcaaactgcattgatttggtttggacaactttttaaaaatcaa 11216189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 22366567 - 22366500
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttt 205  Q
    ||||||| ||||| |||||||  |||  ||||||||||| ||||||||||||||||||||||||||||    
T  22366567 tttatcttgcgataaaccgcacaaaccaaaccaatccaagccgcattggtttggtttggatgactttt 22366500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 7760188 - 7760123
Alignment:
Q  166 aaccaatccaaaccgcattggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaac 226  Q
    ||||||||||| ||||||||||||| ||||     |||||||||||||||||||||| ||||||||    
T  7760188 aaccaatccaagccgcattggtttgatttgatttagatgactttttaaaaatcaaccaaaccaaac 7760123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 2408960 - 2409036
Alignment:
Q  166 aaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||| |||||||| |     || ||||||||||||||||  ||| ||||||||||||||||    
T  2408960 aaccaatccaaaccgcattgatttggtttagtttgaataactttttaaaaatcaattgaatcaaaccaaaccgcatg 2409036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 232
Target Start/End: Original strand, 2308151 - 2308180
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||||||||||||||||||||    
T  2308151 ttttaaaaatcaaccgaaccaaaccaaacc 2308180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 31287815 - 31287848
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||||||||||||||||||||||||    
T  31287815 ttttaaaagtcaaccgaaccaaaccaaaccgcat 31287848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 524867 - 524935
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||| ||||| || |||||||||||||||||    |||||||| |||| |||| |||||||||||||||    
T  524867 ccaacccaaatcgaattggtttggtttggattttattttaaaagtcaatcgaatcaaaccaaaccgcat 524935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 10338791 - 10338835
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||    
T  10338791 aaccgcatcaaccgatccaatccaaaccgaattgatttggtttgg 10338835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 20334665 - 20334597
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||||| ||| ||||||||||  |||    |||| ||| |||||||||||||||||||||||||    
T  20334665 ccaatccaaacagcaatggtttggttcagattttatttttaaagtcaaccgaaccaaaccaaaccgcat 20334597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 32942115 - 32942151
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  32942115 ttttaaaagtcaaccgaatcaaaccaaaccgcatgtt 32942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 33434158 - 33434122
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||  |||||||||||||||||||||    
T  33434158 ttttaaaaatcaacaaaaccaaaccaaaccgcatgtt 33434122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 40848897 - 40848861
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| |||||||||||||||||||||| |||||    
T  40848897 ttttaaaagtcaaccgaaccaaaccaaaccgtatgtt 40848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 48642826 - 48642790
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  48642826 tttttaaagtcaaccgaaccaaaccaaaccgcatgtt 48642790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 9811623 - 9811401
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||    
T  9811623 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgtttggtactagttggcaatatt 9811524  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9811523 agagttaatgtaaattttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 9811424  T
Q  217 cgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||||||||    
T  9811423 cgaaccaaaccaaaccgcatgtt 9811401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 36413480 - 36413710
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  36413480 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 36413579  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  36413580 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 36413679  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  36413680 aaaaatcaaccgaaccaaaccaaaccgcatg 36413710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 16578878 - 16578648
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  16578878 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 16578779  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  16578778 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 16578679  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||| |||||||||||||||||||||    
T  16578678 aaaaatcaatcgaaccaaaccaaaccgcatg 16578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 44979740 - 44979839
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44979740 tttatctcgcgataaaccgcacaagccgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 44979839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 25298225 - 25298323
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||| |||||||  ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  25298225 atctcgcgataaaccgcacaaaccgaaccaatccaaaccgtattagtttggtttggatgactttttaaaaatcaaccgaaccaaaccgaaccgaatgtt 25298323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 11376013 - 11375912
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||| ||||| |||||||  ||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11376013 tttatcttgcgataaaccgcacaaaacgaatcaatccaatccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatg 11375914  T
Q  238 tt 239  Q
    ||    
T  11375913 tt 11375912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 18357015 - 18356916
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| || | |||||| ||| ||||||||    
T  18357015 tttatctcgcgataaaccgcatcaacagaaccaatccaagccgcattggtttggtttgaatgactttttaaaaattaatcaaaccaatccataccgcatg 18356916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 42785595 - 42785698
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||     |||| |||||||||||||| ||||||||||||||||    
T  42785595 tttatctcgcgataaaccgcatcaatcgaaccaatccaaaccgcattggtttggtttggtttgaatgagtttttaaaaatcaagcgaaccaaaccaaacc 42785694  T
Q  233 gcat 236  Q
    ||||    
T  42785695 gcat 42785698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 17916827 - 17916923
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| ||| |||  ||| |||||||||||| |||||||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  17916827 tttatctcgcgataaactgcacaaaccgaaccaatccaagccgcattgg-----tttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 17916921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 44035373 - 44035319
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44035373 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 44035319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 42785214 - 42785269
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttc 73  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  42785214 attttggatagataacttttattggtattgtaatgttattttggaacttcaagttc 42785269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 1331107 - 1331030
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaa 229  Q
    ||||||| ||||||| |||| ||||||| ||||||||||||||||||    |||||||| ||||||||||||||||||    
T  1331107 aaccgcaccaactgatccaacccaaaccacattggtttggtttggattttattttaaaagtcaaccgaaccaaaccaa 1331030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 19937141 - 19937190
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19937141 ttggtttgatttggatgactttttaaaaatcaatcgaaccaaaccaaacc 19937190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 34910424 - 34910332
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttg---gatgactttttaaaaatcaaccgaaccaaacc 227  Q
    |||||||||| || ||||| |  ||| |||| ||||||| ||||||||||||||||||   |||||||||||||||||||||  |||||||||    
T  34910424 tttatctcgcaataaaccgtacaaaccgaactaatccaagccgcattggtttggtttgaatgatgactttttaaaaatcaacaaaaccaaacc 34910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 41461184 - 41461095
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggat-gactttt----taaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| |||| ||  |||||||||||||||||||||||||||| | || ||||    ||||| |||||||||||||||||||||||||    
T  41461184 aaccgcaccaaccgattcaatccaaaccgcattggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcat 41461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 12041598 - 12041661
Alignment:
Q  176 aaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||| ||||    |||||||| |||||||||||||| |||||||||||||    
T  12041598 aaccgcattggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatgtt 12041661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 17762788 - 17762752
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| ||||||||||||||||||||||||||||    
T  17762788 ttttaaaagtcaaccgaaccaaaccaaaccgcatgtt 17762752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 44986082 - 44986120
Alignment:
Q  192 tttggatgactttttaaaaatcaaccgaaccaaaccaaa 230  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  44986082 tttggatgactttttaaaagtcaatcgaaccaaaccaaa 44986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 5862667 - 5862700
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||||||||||||||||||||||||    
T  5862667 ttttaaaagtcaaccgaaccaaaccaaaccgcat 5862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 15320564 - 15320649
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||  | ||||  |||||| |||| |||||||||||||    |||||||||||||| |||||||||| ||| |||||    
T  15320564 aaccgcatcaaccaatccaaaacaaaccacattagtttggtttggattttattttaaaaatcaactgaaccaaacctaactgcatg 15320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 42350789 - 42350825
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  42350789 caactgaactaatccaaactgcattggtttggtttgg 42350825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 30002243 - 30002024
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||| |||||||||||||||||||||||    
T  30002243 attttagataaataacttttattggtattgtaatgctattttggaacttcaaattctttttttgaataattaaaattgcttggtactagttggcaatatt 30002144  T
Q  118 aagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaacc 217  Q
    ||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30002143 aagttaatgtaatttttttatttatctcgtgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaaacaacc 30002044  T
Q  218 gaaccaaaccaaaccgcatg 237  Q
    ||||||||||||||||||||    
T  30002043 gaaccaaaccaaaccgcatg 30002024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 27886266 - 27886486
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||| ||||||||||||    
T  27886266 attttagataaataatttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactggttggcaatatt 27886365  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27886366 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 27886465  T
Q  217 cgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||    
T  27886466 cgaaccaaaccaaaccgcatg 27886486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 667464 - 667686
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||||||||||    
T  667464 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttttttttttgaataattaaaattgcttggtactagttggcaatatt 667563  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  667564 agagttaatgtaatttttttatttatctcgcgatttactgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 667663  T
Q  217 cgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||| |||||    
T  667664 cgaaccaaaccaaaccgtatgtt 667686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 11917648 - 11917418
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  11917648 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 11917549  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | ||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  11917548 agagtaaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 11917449  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  11917448 aaaaatcaaccgaaccaaaccaaaccgcatg 11917418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 15068703 - 15068473
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  15068703 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 15068604  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  15068603 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 15068504  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||| ||||||    
T  15068503 aaaaatcaaccgaaccaaaccaaatcgcatg 15068473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 701462 - 701230
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  701462 attttagataaataacttttattggtattgcaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 701363  T
Q  118 aagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgacttttt- 206  Q
    ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||     
T  701362 aagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattgatttggtttggtttggtttggatgacttttta 701263  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||||||||||| ||||||    
T  701262 aaaaatcaaccgaaccaaaccaaaccacatgtt 701230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 8409231 - 8409004
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| | |||||||| ||||||||||||    
T  8409231 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttt-aataattaaaattgattggtactggttggcaatatt 8409133  T
Q  118 aagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttta 207  Q
    ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||| ||||||||||    
T  8409132 aagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttgggtgacttttta 8409033  T
Q  208 aaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||||||||||||||||||||||||    
T  8409032 aaaatcaaccgaaccaaaccaaaccgcat 8409004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 42544770 - 42544671
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42544770 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgacttcttaaaaatcaaccgaaccaaaccaaaccgcatg 42544671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 30265728 - 30265863
Alignment:
Q  105 agttggcaatatta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactt 203  Q
    |||||||||||||| |||||||||||        ||||||||||||| |||||||  ||| |||| ||| ||| ||||||||||||||||| ||||||||    
T  30265728 agttggcaatattagagttaatgtaatttttttttttatctcgcgatgaaccgcacaaaccgaactaattcaagccgcattggtttggttttgatgactt 30265827  T
Q  204 tttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||||||||||||| |||||||    
T  30265828 tttaaaaatcaaccgaaccaaaccaaactgcatgtt 30265863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 12166163 - 12166234
Alignment:
Q  166 aaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12166163 aaccaatccaagccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatg 12166234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 10174170 - 10174098
Alignment:
Q  165 gaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  10174170 gaaccaatccaaaccgcattggtttggtttggataactttttaaaaatcaaccaaacgaaaccaaaccgcatg 10174098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 35359053 - 35358949
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt-----ttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||||||| |||| ||||||| ||| |||||||||||     ||||||||||||||||| ||||||||||||||||||||||    
T  35359053 tttatctcgcgataaaccgcatcaaccgaactaatccaagccgtattggtttggtttggtttggatgactttttaaatatcaaccgaaccaaaccaaacc 35358954  T
Q  233 gcatg 237  Q
    |||||    
T  35358953 gcatg 35358949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 2226850 - 2226949
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcatt-----ggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||     |||||||||||||||| |||||||||||||||||||||||||||||||    
T  2226850 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattagattggtttggtttggatgagtttttaaaaatcaaccgaaccaaaccaaacc 2226949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 9161100 - 9161001
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||| ||||| |||||||  ||| ||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  9161100 tttatcttgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 9161001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 12681068 - 12681130
Alignment:
Q  166 aaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaacca 228  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12681068 aaccaatccaaaccgcattggtttggtttggatgaatttttaaaaatcaaccgaaccaaacca 12681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 38433814 - 38433710
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggat-----gactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||  ||| |||||||||||| ||||||||||||||||||| |     |||||||||||||||||||||||||||| |||||    
T  38433814 tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgcattggtttggtttggtttggaggactttttaaaaatcaaccgaaccaaactaaacc 38433715  T
Q  233 gcatg 237  Q
    |||||    
T  38433714 gcatg 38433710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 333248 - 333339
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaa 229  Q
    ||||||||||||| |||||||  |||  ||||||| ||| | |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  333248 tttatctcgcgataaaccgcacaaaccaaaccaattcaagctgcattggtttggtttggatgactttttaaaaatcaatcgaaccaaaccaa 333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 17085208 - 17085307
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||| |||| || |||| |||| |||| ||||||| || |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||    
T  17085208 tttatctcacgataaatcgcaccaaccgaacgaatccaagccacattggtttgattgggatgactttttaaaaatcaaccgaaccaaactaaatcgcatg 17085307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 36177121 - 36177175
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36177121 ttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 36177175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 36103627 - 36103680
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36103627 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcat 36103680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 32521154 - 32521280
Alignment:
Q  105 agttggcaatatta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattg-----gtttggtttggat 198  Q
    |||||||||||||| |||||||||||        |||||||| |||| |||||||  ||| |||||||||||||| ||||||     |||||||||||||    
T  32521154 agttggcaatattagagttaatgtaatatttttttttatctcacgataaaccgcacaaaccgaaccaatccaaactgcattgatttggtttggtttggat 32521253  T
Q  199 gactttttaaaaatcaaccgaaccaaa 225  Q
    || ||||||||||||||||||||||||    
T  32521254 gaatttttaaaaatcaaccgaaccaaa 32521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 35359431 - 35359344
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtacta 105  Q
    ||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||       ||||| ||||||| |||||||||||    
T  35359431 attttggatagataacttttattggtattgtaacgttattttggaacttcaagttctttttttgaatatttaaaattgcttggtacta 35359344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 9988876 - 9988921
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacca 228  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  9988876 ttggtttgatttggatgactttttaaaaatcaaccgaatcaaacca 9988921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 36567803 - 36567735
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||||||||||||||||||||||| ||    |||||||| |||||| |||| |||||||||||||    
T  36567803 ccaatccaaaccgcattggtttggtttgaattttattttaaaagtcaaccaaaccgaaccaaaccgcat 36567735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 41454971 - 41454927
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||||||||||||||||||||||||||||    
T  41454971 aaccgcaccaacagatccaatccaaaccgcattggtttggtttgg 41454927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 36177066 - 36177124
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| ||||| |||||||  |||  ||||||||||| |||||||||||||||||||    
T  36177066 tttatcttgcgataaaccgcacaaacccaaccaatccaagccgcattggtttggtttgg 36177124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 2589021 - 2588985
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| |||||| |||||||||||||||||||||    
T  2589021 ttttaaaagtcaaccaaaccaaaccaaaccgcatgtt 2588985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 27572020 - 27572064
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||| ||||||||||||||||||||||||    
T  27572020 aaccgcaccaaccgatccaacccaaaccgcattggtttggtttgg 27572064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 36077805 - 36077586
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  36077805 attttagataaataacttttattggtattgtaatgcttttttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 36077706  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36077705 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgtattggtttggtttggatgactttttaaaaatcaac 36077606  T
Q  217 cgaaccaaaccaaaccgcat 236  Q
    ||||||||||||||||||||    
T  36077605 cgaaccaaaccaaaccgcat 36077586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 29637016 - 29636786
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  29637016 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 29636917  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||| ||||||    
T  29636916 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatggcttttt 29636817  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  29636816 aaaaatcaaccgaaccaaaccaaaccgcatg 29636786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 50570798 - 50571028
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||    
T  50570798 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgtttggtactagttggcaatatt 50570897  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  50570898 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 50570997  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  50570998 aaaaatcaaccgaaccaaaccaaaccgcatg 50571028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 42557966 - 42557737
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||       ||||||||||||| | |||||||||||||||||||||    
T  42557966 attttagataaataacttttattggtattgtaatgttattttgga-cttcaagttctttttttgaataattaaaattgtttggtactagttggcaatatt 42557868  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttgg----------tttggatgacttttt 206  Q
    | |||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||    
T  42557867 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgatttggtttggatgacttttt 42557768  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  42557767 aaaaatcaaccgaaccaaaccaaaccgcatg 42557737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 29644029 - 29644195
Alignment:
Q  82 aataattaaaatggcttggtactagttggcaatatta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccg 180  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||| |||||||||||||||||    
T  29644029 aataattaaaattgcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaattgaaccaatccaaaccg 29644128  T
Q  181 ca----------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29644129 cattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 29644195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 30193946 - 30194045
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30193946 tttatctcgcgataaaccgcataaaccgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 30194045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 23937492 - 23937587
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| || |||||||  ||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23937492 atctcgcaataaaccgcacaaaccgaaccaatccaagctgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 23937587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 5261938 - 5262034
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||| |||||||||||| |||||||||||| |   ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  5261938 atctcgcgataaaccgcatcaaccgaaccaatccaagctaaattggtttggtttggatgactttttaaaaatcaactgaactaaaccaaaccgcatg 5262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 48996196 - 48996097
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||| ||||| |||||||  ||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  48996196 tttatcttgcgataaaccgcacaaatcgaaccaatccaagccgcattggtttggtttggataactttttaaaaatcaaccgaaccaaaccaaaccacatg 48996097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 43630689 - 43630591
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||| ||| |||  ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  43630689 tttatctcacgataaactgcacaaaccgaaccaatccaagccgcattggtttgatttggatgactttttaaaaatcaaccaaaccaaaccaaaccgcat 43630591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 40900049 - 40900153
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||  |||  |||||||||||||||||||||     |||||||||||||||||||||||||||||| |||||||||||||||    
T  40900049 tttatctcgcgataaaccgcacaaaccaaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaacc 40900148  T
Q  233 gcatg 237  Q
    |||||    
T  40900149 gcatg 40900153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 8176568 - 8176657
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||| || |||| |||||||  ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  8176568 tttatttcacgataaaccgcacaaaccgaaccaatccaagccgcattggtttggtttagatgactttttaaaaatcaaccaaaccaaacc 8176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 52344844 - 52344755
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||| | ||| |||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  52344844 tttatcttgtgataaaccgcacaaaccgaaccaatccaatccgcattggtttggtttggatgactttttaaaaattaatcgaaccaaacc 52344755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 32136809 - 32136705
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    |||||||| |||| |||||||  ||| ||||||||||||||||||||||||||||||||     |||| |||||||||||||| |||||||||||||| |    
T  32136809 tttatctcacgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggatgaatttttaaaaatcaatcgaaccaaaccaaatc 32136710  T
Q  233 gcatg 237  Q
    |||||    
T  32136709 gcatg 32136705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 40806784 - 40806888
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||| ||| |||||||  ||| |||||||||||||| |||||||     |||||||||||||| ||||||||||||||||||||||||||||| |    
T  40806784 tttatctcgtgataaaccgcacaaaccgaaccaatccaaactgcattggtttggtttggtttggatgattttttaaaaatcaaccgaaccaaaccaaatc 40806883  T
Q  233 gcatg 237  Q
    |||||    
T  40806884 gcatg 40806888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 51394830 - 51394736
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||||||||||||||||| ||  | ||||||||||||||||     | |||||||||||||||||||||| ||||||    
T  51394830 tttatctcgcgataaaccgcatcaactgaaccaatcaaagtcacattggtttggtttggttggaaagactttttaaaaatcaaccgaatcaaacc 51394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6333433 - 6333334
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||          ||||||||||||||||||||||||| |||||||||    
T  6333433 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttgatttggatgactttttaaaaatcaaccaaaccaaacc 6333334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 23449985 - 23450053
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||||||||||||||||||| ||||| |  |||||||| | |||||||||||||||||||||||    
T  23449985 ccaatccaaaccgcattggtttggtgtggattatattttaaaagttaaccgaaccaaaccaaaccgcat 23450053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 5261556 - 5261611
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttc 73  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5261556 attttggatagataacttttattggtattgtaatgttattttggaacttcaagttc 5261611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 45983479 - 45983396
Alignment:
Q  154 ccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||| || |||| |||||||||||| ||||||||||||||   |||| ||| ||||||||| ||||||||||||||||    
T  45983479 ccgcatcaaccgatccaacccaaaccgcattagtttggtttggatgttatttttaaagtcaaccgaatcaaaccaaaccgcatg 45983396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 48602504 - 48602587
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 235  Q
    ||||||| |||| || |||| ||||||||||||||||||||| ||||    |||| ||| ||||||||||||||||||||||||    
T  48602504 aaccgcaccaaccgatccaacccaaaccgcattggtttggttaggattgtattttcaaagtcaaccgaaccaaaccaaaccgca 48602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 48293406 - 48293475
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||| ||||||||||||||||||||| ||||    ||||||||  |||||||||||||||||||||||||    
T  48293406 ccaacccaaaccgcattggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatg 48293475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 10218797 - 10218742
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||||||| ||||| |  ||| ||||||||||||||||||||||||||||||||    
T  10218797 atctcgcgataaaccgtacaaaccgaaccaatccaaaccgcattggtttggtttgg 10218742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 51395201 - 51395162
Alignment:
Q  29 ataacttttattggtattgtaatgctattttggaacttca 68  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  51395201 ataacttttattggtattgtaatgttattttggaacttca 51395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 23120273 - 23120327
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||  ||||| ||| |||| |||||||||||||||||||||    
T  23120273 ttggtttggtttggatgttttttttaaagtcaatcgaaccaaaccaaaccgcatg 23120327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 13690872 - 13690912
Alignment:
Q  191 gtttggatgactttttaaaaatcaaccgaaccaaaccaaac 231  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  13690872 gtttggatgactttttaaaaatcaaccgaatcaaatcaaac 13690912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 29232847 - 29232767
Alignment:
Q  155 cgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 235  Q
    |||| |||| || |||||||||| ||||||||||| ||| ||||    |||||||| |||||||||| |||||||||||||    
T  29232847 cgcaccaaccgatccaatccaaatcgcattggtttagttcggattttattttaaaagtcaaccgaactaaaccaaaccgca 29232767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 36106399 - 36106492
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggat--gact---ttttaaaaatcaaccgaaccaaacc-aaaccgcatgtt 239  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||| |  || |   |||||||| |||||||||||||||| ||||||||||||    
T  36106399 aaccgcaccaactgatccaactcaaaccgcattggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaaccgcatgtt 36106492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 48338407 - 48338351
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||    |||||||| |||||||||||||||||||| |||||||    
T  48338407 ttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgtt 48338351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 10218737 - 10218691
Alignment:
Q  191 gtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||| | ||||||||||| ||| ||||||||||||||||    
T  10218737 gtttggatgactatataaaaatcaactgaatcaaaccaaaccgcatg 10218691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 35233314 - 35233356
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaa 225  Q
    ||||||||||||||| ||||||||||||  |||||||||||||    
T  35233314 ttggtttggtttggacgactttttaaaagccaaccgaaccaaa 35233356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 4688766 - 4688690
Alignment:
Q  165 gaaccaatccaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||||| ||||| ||||||||||||||||     || ||||||||||| ||||||||| | |||||||| ||||    
T  4688766 gaaccaatcaaaaccacattggtttggtttggttaagataactttttaaaagtcaaccgaatcgaaccaaactgcat 4688690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 14866823 - 14866787
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  14866823 ttttaaaagtcaactgaaccaaaccaaaccgcatgtt 14866787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 15723989 - 15723945
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||||||||| || |||| |||||||||||| |||||||||||    
T  15723989 aaccgcatcaaccgatccaacccaaaccgcattagtttggtttgg 15723945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 18319546 - 18319590
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||| ||||||||||||||||||||||||    
T  18319546 aaccgcaccaaccgatccaacccaaaccgcattggtttggtttgg 18319590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 18399135 - 18399091
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||| ||||||||||||||||||||||||    
T  18399135 aaccgcaccaaccgatccaacccaaaccgcattggtttggtttgg 18399091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 23625876 - 23625920
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||||||||||||||||| ||||||||||    
T  23625876 aaccgcaccaaccgatccaatccaaaccgcattgatttggtttgg 23625920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 28147864 - 28147836
Alignment:
Q  170 aatccaaaccgcattggtttggtttggat 198  Q
    |||||||||||||||||||||||||||||    
T  28147864 aatccaaaccgcattggtttggtttggat 28147836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 41325172 - 41325109
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||||||||||||||||||||| |||     |||||||| |||||||||  ||| ||||||||||    
T  41325172 ccaatccaaaccgcattggtttggttcgga-----ttttaaaagtcaaccgaattaaatcaaaccgcat 41325109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 51907129 - 51907085
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||| |||||||||||||||| |||||| |||| ||||    
T  51907129 ttggtttggttcggatgactttttaaaagtcaaccaaaccgaacc 51907085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 54274008 - 54274044
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  54274008 caaccgaaccaatccaaaccacattggtttggtttgg 54274044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 5733 - 5953
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||||||||||||| | |||||||||||| ||||||||    
T  5733 attttagataaataacttttattggtattgtaatgttattttggaacttcaagttctttttttgaataattaaaattgattggtactagttcgcaatatt 5832  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5833 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 5932  T
Q  217 cgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||    
T  5933 cgaaccaaaccaaaccgcatg 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 51149508 - 51149727
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  51149508 attttagataaataacttttattggtattgtaatgctattttgga-cttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 51149606  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51149607 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatcactttttaaaaatcaac 51149706  T
Q  217 cgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||    
T  51149707 cgaaccaaaccaaaccgcatg 51149727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 34794826 - 34794607
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  34794826 attttagataaataactgttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 34794727  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 216  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34794726 agagttaatgtaatttttt-atttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaac 34794628  T
Q  217 cgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||| ||||||    
T  34794627 cgaaccaaaccaaatcgcatg 34794607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 35402050 - 35402277
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||    
T  35402050 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcaatatt 35402149  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca-----ttggtttggtttggatgactttttaaaaa 211  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||    
T  35402150 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaa 35402249  T
Q  212 tcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||||||||||||||    
T  35402250 tcaaccgaaccaaaccaaaccgcatgtt 35402277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 33361196 - 33360968
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||    
T  33361196 attttagataaataacttttattggtattgtaatactattttggaacttcaagttcttttttttaataattaaaattgcttggtactagttggcaatatt 33361097  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  33361096 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 33360997  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgca 235  Q
    |||||||||||||||||||||||||||||    
T  33360996 aaaaatcaaccgaaccaaaccaaaccgca 33360968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 10369454 - 10369222
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||| ||||||||||| |||||||||||    
T  10369454 attttagataaataacttttattggtattttaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactaattggcaatatt 10369355  T
Q  118 aa-gttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttttt 206  Q
    |  ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  10369354 agtgttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 10369255  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||| |||||| ||||||||||||||||    
T  10369254 aaaaatcaaacgaaccgaaccaaaccgcatgtt 10369222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 4669550 - 4669717
Alignment:
Q  81 gaataattaaaatggcttggtactagttggcaatatta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaacc 179  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  4669550 gaataattaaaattgcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaacc 4669649  T
Q  180 gcattggtttggttt----------ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  4669650 gcattggtttggtttggtttggttcggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 4669717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 6004358 - 6004457
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6004358 tttatctcgcgataaaccgcacaaaccgaatcaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 6004457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 9827749 - 9827836
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaa 225  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  9827749 tttatctcgcgataaaccgcaccaactgaaccaatccaagccgtattggtttggtttggatgactttttaaaaatcaacctaaccaaa 9827836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 48032843 - 48032918
Alignment:
Q  161 aactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  48032843 aactgaaccaatccaaaccgcattggtttggtttggatgaatttttaaaaatcaaccgaacc-aaccaaaccgcatg 48032918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 32880412 - 32880313
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  32880412 tttatctcgcgataaaccgcacaaaccgaaccaattcaaaccgtattggtttggtttgtatgactttttaaaaatcaaccgaaccaaatcaaaccacatg 32880313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 21586814 - 21586913
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| ||| |||  ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  21586814 tttatctcgcgataaactgcacaaaccgaaccaatccaagctgcattggtttggtttggatgactttttaaaaatcaactgaatcaaaccaaactgcatg 21586913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 50562541 - 50562640
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| |||||||||||| ||| ||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||    
T  50562541 tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgaattggtttgattgggatgaatttttaaaaatcaaccgaaccaaaccaaaccacatg 50562640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 4669439 - 4669493
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagtt 72  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  4669439 attttagataaataactttcattggtattgtaatgctatttttgaacttcaagtt 4669493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 43030483 - 43030430
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43030483 ttggtttagtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcat 43030430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 38651974 - 38652058
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||||||| || |||| |||||||||||| |||||||||||||    |||| ||| |||||||||||||||||||||||||    
T  38651974 aaccgcatcaaccgatccaacccaaaccgcattagtttggtttggatattatttttaaagtcaaccgaaccaaaccaaaccgcat 38652058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 55467622 - 55467711
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggat--gact---ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| |  || |   |||||||| |||||||||||||||||||||||||    
T  55467622 aaccgcaccaactgatccaatccaaaccgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcat 55467711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 9817759 - 9817810
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaa 69  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  9817759 attttggataaataacttttattggtattgtaattttattttggaacttcaa 9817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 39098010 - 39097959
Alignment:
Q  188 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  39098010 ttggtttggacgactttttaaaaatcaactgaaccaaatcaaaccgcatgtt 39097959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 20038487 - 20038443
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  20038487 aaccgcaacaattgaaccaatccaaaccgcattggtttggtttgg 20038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 45915189 - 45915272
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| |||| || ||||| |||||||||||||| |||||||| |    |||||||| |||||||||||||||||||||||||    
T  45915189 aaccgcaccaaccgatccaattcaaaccgcattggtctggtttgg-tttggttttaaaagtcaaccgaaccaaaccaaaccgcat 45915272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 51191807 - 51191718
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcat-----tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| |||| |||||||||||||||||||     |||||||||| || |  | ||||||||  ||||||||||||||||||||||||    
T  51191807 aaccgcaacaaccgaaccaatccaaaccgcatcggtttggtttggttcggttttcattttaaaatccaaccgaaccaaaccaaaccgcat 51191718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 43030543 - 43030485
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||||||||| |||| ||  ||| |||||||| ||||| |||||||||||||||||    
T  43030543 tttatctcgcgataaaccacacaaaccgaaccaattcaaactgcattggtttggtttgg 43030485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 54122067 - 54122034
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    |||||||| |||||||||||||||||||||||||    
T  54122067 ttttaaaagtcaaccgaaccaaaccaaaccgcat 54122034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 26291992 - 26292024
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgca 235  Q
    ||||||||||||||||||||||| |||||||||    
T  26291992 ttttaaaaatcaaccgaaccaaagcaaaccgca 26292024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 35532122 - 35532201
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaacc 222  Q
    ||||||||||||| |||||||  |||  || |||||||| |||||||||     ||||||||| |||||||||||||||| ||||    
T  35532122 tttatctcgcgataaaccgcacaaaccaaatcaatccaatccgcattgg-----tttggatgaatttttaaaaatcaaccaaacc 35532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 5803085 - 5803316
Alignment:
Q  17 aattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||| |||    
T  5803085 aattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttggcagtat 5803184  T
Q  117 ta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgactttt 205  Q
    || |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  5803185 tagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgactttt 5803284  T
Q  206 taaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||||||||||||||||||||||    
T  5803285 taaaaatcaaccgaaccaaaccaaaccgcatg 5803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 3006413 - 3006642
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| || ||||||||||||||||||||||    
T  3006413 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaattg-cttggtactagttggcaatatt 3006511  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgacttttt 206  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  3006512 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttttt 3006611  T
Q  207 aaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||    
T  3006612 aaaaatcaaccgaaccaaaccaaaccgcatg 3006642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 10661265 - 10661166
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| || ||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661265 tttatctcgcgataaatcgcacaaaccgaaccaatacaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 10661166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 44672873 - 44672799
Alignment:
Q  165 gaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44672873 gaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaatcgaaccaaaccaaaccgcatgtt 44672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 36910306 - 36910401
Alignment:
Q  141 atctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||| ||| |||  ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36910306 atctcgcgataaactgcacaaaccgaaccaatccaagccgc-ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaaccgcatg 36910401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 18169991 - 18170085
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||     ||||||||||||||| ||||||||||||||||    
T  18169991 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggttttgatgactttttaaaactcaaccgaaccaaacc 18170085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 14549345 - 14549237
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg----------atgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| ||||||    
T  14549345 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaatcaaacc 14549246  T
Q  228 aaaccgcat 236  Q
    |||||||||    
T  14549245 aaaccgcat 14549237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 3682035 - 3681950
Alignment:
Q  142 tctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||| |||||||  ||  |||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  3682035 tctcgcgataaaccgcacaaatcgaaccaatccaagccgcattggtttagtttggatgactttttaaaagtcaaccaaaccaaacc 3681950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 18633558 - 18633653
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| ||||||||||||||||||      |||||||||||| ||||||||||||||| ||||||||||||||||    
T  18633558 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggttttggtttggttttgatgactttttaaaactcaaccgaaccaaacc 18633653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 33068328 - 33068278
Alignment:
Q  187 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33068328 tttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatg 33068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 38926419 - 38926481
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaacc 222  Q
    |||| ||||||||||||||| |||||||||||||   |||||||||||||| |||||||||||    
T  38926419 caaccgaaccaatccaaaccacattggtttggttcaaatgactttttaaaagtcaaccgaacc 38926481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 7428434 - 7428503
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||||||| |||||||| | ||    |||||||| ||||||||||||||||||||||||||    
T  7428434 ccaatccaaaccgcattagtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatg 7428503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 6200878 - 6200925
Alignment:
Q  192 tttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||    
T  6200878 tttggatgactttttaaaaatcaacttaaccaaactaaaccgcatgtt 6200925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 12660257 - 12660321
Alignment:
Q  168 ccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||||||| |||||||| ||||    |||| ||| |||||||||||||||||||||    
T  12660257 ccaatccaaaccgcatttgtttggttcggattttatttttaaactcaaccgaaccaaaccaaacc 12660321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 44336819 - 44336783
Alignment:
Q  203 ttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||| ||||||||||||||||||||||||||||    
T  44336819 ttttaaaagtcaaccgaaccaaaccaaaccgcatgtt 44336783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 28073176 - 28073263
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||| ||| | ||| |||||||||| ||||||||||||| || |  | |||||||| ||||| ||||||||| ||||| ||||||    
T  28073176 aaccgcaacaattaaactaatccaaaccacattggtttggttcggttttcattttaaaagtcaactgaaccaaactaaaccacatgtt 28073263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 12193443 - 12193484
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtt 193  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  12193443 aaccgcatcaaccgatccaatccaaaccgcattgatttggtt 12193484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 12437871 - 12437912
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtt 193  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  12437871 aaccgcatcaaccgatccaatccaaaccgcattgatttggtt 12437912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 31497615 - 31497664
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    |||||||||||||||||   |||| ||| |||||||||||||||||||||    
T  31497615 ttggtttggtttggatgttatttttaaagtcaaccgaaccaaaccaaacc 31497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 9012817 - 9012861
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||| ||||||||||||||||||||||||    
T  9012817 aaccgcaccaaccgatccaacccaaaccgcattggtttggtttgg 9012861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 8211523 - 8211291
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnng--aataattaaaatggcttggtactagttggcaata 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| |||||||||||||||||||||    
T  8211523 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttttaataattaaaattgcttggtactagttggcaata 8211424  T
Q  116 tta-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt----------ttggatgacttt 204  Q
    ||| |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  8211423 ttagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgacttt 8211324  T
Q  205 ttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||    
T  8211323 ttaaaaatcaaccgaaccaaaccaaaccgcatg 8211291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 5155173 - 5155352
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttggcaatatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||| ||||||    
T  5155173 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttaataattaaaattgcttggtactagttggtaatatt 5155272  T
Q  118 a-agttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5155273 agagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 5155352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 20493994 - 20493759
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnng--aataattaaaatggcttggtactagttggcaata 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| | |||||| ||||||||||||    
T  20493994 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttgtaataattaaaattgtttggtattagttggcaata 20493895  T
Q  116 tta-agttaatgt-aannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg----------atgactt 203  Q
    ||| ||||||||| ||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||    
T  20493894 ttagagttaatgttaatttttttatttatctcgagattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgactt 20493795  T
Q  204 tttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  20493794 tttaaaaatcaaccgaaccaaaccaaaccgcatgtt 20493759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 33474559 - 33474460
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  33474559 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgacttttttaaaatcaaccgaaccaaactaaaccgcatg 33474460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 29707951 - 29708043
Alignment:
Q  18 attttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatggcttggtactagttgg 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||    
T  29707951 attttatataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattgcttggtactagttgg 29708043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 45691914 - 45691808
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggttt-----ggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    |||||||| |||| |||||||  ||| |||||||||||||||||||| |||||||||     ||||||||||||||||||||||||||||||||||||||    
T  45691914 tttatctcacgataaaccgcacaaaccgaaccaatccaaaccgcattagtttggtttagtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 45691815  T
Q  233 gcatgtt 239  Q
    |||||||    
T  45691814 gcatgtt 45691808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 1161713 - 1161812
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||| |||| |||||||  ||| ||||||||| || | |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  1161713 tttatctcacgataaaccgcacaaaccgaaccaatcgaagctgcattggtttggtttggatgactttttaaaaatcaaccaaaccaaaccaaaccacatg 1161812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 51252386 - 51252485
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||| ||| |||||||  ||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  51252386 tttatctcgtgataaaccgcacaaaccgaaccaattcaagccgcattgatttggtttggatgactttttaaaaatcaacccaaccaaaccaaaccacatg 51252485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 42789579 - 42789667
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaac 226  Q
    ||||||||||||| |||  ||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  42789579 tttatctcgcgataaacaacatcaaccgaaccgatccaagccgcattgatttggtttggatgactttttaaaaatcaactgaaccaaac 42789667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 32954104 - 32954050
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32954104 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 32954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 29389149 - 29389045
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattg-----gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||| ||||| ||| |||| ||| |||||||||||||||||||||     |||||||||||||||||||||||||||||| | ||||||| ||||||    
T  29389149 tttatcttgcgataaactgcataaaccgaaccaatccaaaccgcattgatttggtttggtttggatgactttttaaaaatcaatcaaaccaaatcaaacc 29389050  T
Q  233 gcatg 237  Q
    |||||    
T  29389049 gcatg 29389045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 5155359 - 5155413
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5155359 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatg 5155413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 39256652 - 39256706
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39256652 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaaccgcatg 39256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 44918659 - 44918565
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggttt-----ggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||| ||| |||||||  ||| |||||||||||||||| |||||||||||||     |||||||||||||||||||||||||||||||||    
T  44918659 tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgtattggtttggtttcgtttggatgactttttaaaaatcaaccgaaccaaacc 44918565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 16529516 - 16529570
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16529516 ttggtttggtttgaatgactttttaaaaatcaaccgaaccaaaccaaacggcatg 16529570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 11899127 - 11899027
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| |||||||||||||||| |          |||||||||||||||||| ||||||||||||||||||||||||||    
T  11899127 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgtattggtttagtttggtttggtttggatgattttttaaaaatcaaccgaaccaaacc 11899028  T
Q  228 a 228  Q
    |    
T  11899027 a 11899027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 33769972 - 33769936
Alignment:
Q  160 caactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||||||||||||||||||||||||||||||||||    
T  33769972 caactgaaccaatccaaaccgcattggtttggtttgg 33769936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 16537822 - 16537909
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||    |||||||| | |||| ||||||| |||||||||||||    
T  16537822 aaccgcatcaacagatccaacccaaactgcattggtttggttcggattttattttaaaagtgaaccaaaccaaatcaaaccgcatgtt 16537909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 33910797 - 33910852
Alignment:
Q  183 ttggtttggttt-ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  33910797 ttggtttggttttggatgaatttttaaaaatcaaccgaaccaaatcaaaccacatg 33910852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 32954164 - 32954106
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    |||||||| |||| |||||||  ||| |||||||||||| |||||||||||||||||||    
T  32954164 tttatctcacgataaaccgcacaaaccgaaccaatccaagccgcattggtttggtttgg 32954106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 24911020 - 24911076
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggttt 194  Q
    |||||||||| || |||||||  ||| |||||||||||||| |||||||||||||||    
T  24911020 tttatctcgcaataaaccgcacaaaccgaaccaatccaaactgcattggtttggttt 24911076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 26345032 - 26345075
Alignment:
Q  151 taaccgcatcaactgaaccaatccaaaccgcattggtttggttt 194  Q
    |||||||| |||| || |||||||||||||||||||||||||||    
T  26345032 taaccgcaccaaccgatccaatccaaaccgcattggtttggttt 26345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 27507479 - 27507554
Alignment:
Q  155 cgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaa 230  Q
    |||| ||||||| |||||||||||  |||||||||| |||||||    |||||||| |||||||||| ||||||||    
T  27507479 cgcaccaactgatccaatccaaacatcattggtttgatttggattttattttaaaagtcaaccgaactaaaccaaa 27507554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 16529461 - 16529519
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| ||||| |||||||  ||| |||||||| ||| |||||||||||||||||||    
T  16529461 tttatcttgcgataaaccgcacaaaccgaaccaattcaagccgcattggtttggtttgg 16529519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 11074374 - 11074418
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||| |||||| || |||||||||||||||||| ||||||||||    
T  11074374 aaccgtatcaaccgatccaatccaaaccgcattgatttggtttgg 11074418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 17651859 - 17651815
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||||||||  | |||| ||||||||||||||||||||||||    
T  17651859 aaccgcatcaaccaatccaaaccaaaccgcattggtttggtttgg 17651815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 33910742 - 33910794
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttg 190  Q
    ||||||||  ||| |||||||| ||| ||||||||| ||||||||||||||||    
T  33910742 tttatctcatgataaaccgcataaaccgaaccaatcaaaaccgcattggtttg 33910794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 34914231 - 34914147
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 236  Q
    ||||||| |||| || |||||||||||| ||||||||||||| | ||    |||||||| |||||| || |||||||||| ||||    
T  34914231 aaccgcaacaaccgatccaatccaaaccacattggtttggttcgaattttattttaaaagtcaaccaaagcaaaccaaactgcat 34914147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 40095396 - 40095440
Alignment:
Q  152 aaccgcatcaactgaaccaatccaaaccgcattggtttggtttgg 196  Q
    ||||||| |||| || |||||||||||| ||||||||||||||||    
T  40095396 aaccgcaccaaccgatccaatccaaaccacattggtttggtttgg 40095440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 40541 - 40640
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattgg-----tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 232  Q
    ||||||||||||| |||||||   |  ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  40541 tttatctcgcgataaaccgcacatatcgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 40640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 69556 - 69610
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  69556 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccacatg 69610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 106096 - 106042
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 237  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  106096 ttggttcggtttggatgacattttaaaaatcaaccgaaccaaaccaaaccacatg 106042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 128758 - 128649
Alignment:
Q  138 tttatctcgcgattaaccgcatcaactgaaccaatccaaaccgca----------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 227  Q
    ||||||||||||| |||||||  ||| |||||||||||| |||||          |||||| ||||||||||||||||||||||||||| ||||||||||    
T  128758 tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgcattgatttggtttggttcggtttggatgactttttaaaaatcaacagaaccaaacc 128659  T
Q  228 aaaccgcatg 237  Q
    ||||| ||||    
T  128658 aaaccacatg 128649  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 25929 - 25873
Alignment:
Q  183 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtt 239  Q
    ||||||||||||||||    |||||||| |||||||||||||||||||| |||||||    
T  25929 ttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatgtt 25873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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