View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7340_high_2 (Length: 375)
Name: NF7340_high_2
Description: NF7340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7340_high_2 |
 | |
|
| [»] chr1 (27 HSPs) |
| |
|
Alignment Details
Target: chr1 (Bit Score: 307; Significance: 1e-173; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 11028738 - 11028364
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| ||||||||| | |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11028738 |
cagccaatgcattctaattcttccttctattcgcaatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgtgccaacatttct |
11028639 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
11028638 |
atagaatagttcaggggccatgtatccaatggttcttcttgctgcagttaatgacacaatgctattacctgtaggacaaagtctagctagtccgaaatca |
11028539 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11028538 |
gaaacttttggattaaaattctcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattacatccattatgcaagtactcaatgc |
11028439 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11028438 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
11028364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 11010869 - 11011210
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
11010869 |
cagccaatgcattcaagttcttccttctacttgccatctccatcaacaacatcccaaaactatatacatcagctttgtaagatattgtgccaacatttct |
11010968 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11010969 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagctagtccaaaatca |
11011068 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
11011069 |
gaaacttttggattgaaattttcatcaagaagaatgttatgaggctttatatcaaagtgtagaattttcatattgcatccatgatgcaagtactcaatgc |
11011168 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaac |
342 |
Q |
| |
|
| | ||| |||||||||||||| | || ||||| |||||||| |
|
|
| T |
11011169 |
cacgagccactccaagagaaattgaatacaattgttcgcaac |
11011210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 6 - 375
Target Start/End: Original strand, 10974230 - 10974599
Alignment:
| Q |
6 |
aatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtaga |
105 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
10974230 |
aatgcattcaaattcttccttctactcgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgtgccaatatttctgtaga |
10974329 |
T |
|
| Q |
106 |
atagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaac |
205 |
Q |
| |
|
| |||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10974330 |
acagttcaggggccatgtatccaatcgttcctcttgcagcagttaatggcacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaac |
10974429 |
T |
|
| Q |
206 |
ttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgcctcaa |
305 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| || | | |
|
|
| T |
10974430 |
ttttggattgaaatattcatcaagaaggatggtatgaggctttatatcaaagtgtagaattttcatatcacatccattatgaaagtactcaattccacga |
10974529 |
T |
|
| Q |
306 |
gcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
|| || ||||||||||| |||||||||||||| |||| ||| |||||||||||||||| |||||||||| |
|
|
| T |
10974530 |
gccaccccaagagaaatggcatgcaatttttcacaactcaaggaattactctcttcaatgtgagaaaata |
10974599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 11005153 - 11004779
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
11005153 |
cagccaatggattcaagttcttccttctacttgccatctccatcaacaacatcccaaagctatagacatcagctttgtgagatattgtgccgacatttct |
11005054 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||| | |||||||||| |
|
|
| T |
11005053 |
gtagaatagttcaggggccatgtatccaatggttcctcttgctgcagttaaggacacaatgcttttgtctgtaggagaaaccctagctaatccaaaatca |
11004954 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |
|
|
| T |
11004953 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattgcatccattatgcaagtatgcaatac |
11004854 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
||| ||| || ||||||||||| |||| |||||||| |||| |||| | ||||||||||||||| ||||||||| |
|
|
| T |
11004853 |
ctcgagctacaccaagagaaatggcatacaattttttacaactcaaagagttactctcttcaataagagaaaata |
11004779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 11007707 - 11008081
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||| |
|
|
| T |
11007707 |
cagccaatacatccaagttcttccttctatttgccatctccattaacaacatcccaaaactataaacatcagctttgtaagatatcgtgccgacatttcg |
11007806 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11007807 |
gtagaatagttcaggggccatgtatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
11007906 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
11007907 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatgtcaaagtgtagaattttcatattgcatccattgtgcaagtactcaatgc |
11008006 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
| | ||| |||||||| ||||| | || ||||| |||||||| ||| ||| | ||||||| |||||||||||| |
|
|
| T |
11008007 |
cacgagccactccaagtgaaattgaatacaattgttcgcaactcaaggaataattctcttcggtatgagaaaata |
11008081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 11033160 - 11033534
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||| |
|
|
| T |
11033160 |
cagccaatgcattcaagttcttccttctatttgccatctccatcaacaacatcccaaaactataaacatcagctttgtaagatattgtgccgacatttcg |
11033259 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11033260 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgtgacaatgcttttatctgtaggacaaagtctagctagtccaaaatca |
11033359 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11033360 |
gaaacttttgggttgaaattctcatcaagaaggatgttatgaggctttatgtcaaagtgtagaattttcatatcgcatccattatgcaagtactcaatgc |
11033459 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
||| ||| |||||||||||||| | || ||||| |||||||| ||| ||| | | |||||| |||||||||||| |
|
|
| T |
11033460 |
ctcgagccactccaagagaaattgaatacaattgttcgcaactcaaggaataattttcttcattatgagaaaata |
11033534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 10914568 - 10914909
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
10914568 |
cagccaatgcattcaaattcttccttctgcttgccatctccattaacaacatcccaaagctatatacatcagctttgtgagatattgtgccgacatttct |
10914667 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||| |
|
|
| T |
10914668 |
atagaataattcaggggccatatatccgatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggagaaagcctggctagtccaaaatca |
10914767 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
10914768 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattgcatccattgtgcaagtactcaatgc |
10914867 |
T |
|
| Q |
301 |
ctcaagcaactccaagagaaatagcatgcaatttttcgcaac |
342 |
Q |
| |
|
| | ||| |||||||||||||| | || ||||| |||||||| |
|
|
| T |
10914868 |
cacgagccactccaagagaaattgaatacaattgttcgcaac |
10914909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 6 - 342
Target Start/End: Original strand, 10903413 - 10903746
Alignment:
| Q |
6 |
aatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtaga |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10903413 |
aatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatatcattccaacatttctgtaga |
10903512 |
T |
|
| Q |
106 |
atagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaac |
205 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
10903513 |
aaagttcaggggc---atatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggagaaagtctggcaagtccaaaatcagaaac |
10903609 |
T |
|
| Q |
206 |
ttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgcctcaa |
305 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||| | |
|
|
| T |
10903610 |
ttttggattgaaactttcatcaagaagaatgttatgaggctttatatcaaagtgtagaattttcacattgcatccgttatgcaagtacgcaatgcctcga |
10903709 |
T |
|
| Q |
306 |
gcaactccaagagaaatagcatgcaatttttcgcaac |
342 |
Q |
| |
|
|| ||| ||| |||||| |||| ||| ||||| |||| |
|
|
| T |
10903710 |
gccacttcaacagaaatggcatacaacttttcacaac |
10903746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 10979310 - 10979574
Alignment:
| Q |
8 |
tgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaat |
107 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10979310 |
tgcattcaagttcctccttctacttgccatctccatcaacaacatcccaaaactatatacatcagctttgtaagatattgtgccaacatttctgtagaat |
10979409 |
T |
|
| Q |
108 |
agttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaactt |
207 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979410 |
agttcaggagccatgtatccaatggtccctcttgctgcagttaatgacacaaagcttttatctgtaggacaaagtctagcaagtccaaaatcagaaactt |
10979509 |
T |
|
| Q |
208 |
ttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcata |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979510 |
ttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcata |
10979574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10901568 - 10901730
Alignment:
| Q |
1 |
cagctaatgcattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttct |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
10901568 |
cagccaatgcattcaagttcttccttctacttgccatctccatcaacaacattccaaaactatagacatcagctttgtgagatattgtgccgacatttct |
10901667 |
T |
|
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgct |
163 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
10901668 |
gtagaataattcaggggccatgtatccaatggttcctcttgctgctgttaatgaaacaatgct |
10901730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 9319908 - 9320136
Alignment:
| Q |
28 |
tacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatcc |
127 |
Q |
| |
|
|||||||||| ||||| || | ||| || |||||||| |||||||| ||||| |||| | |||| |||| ||||||| | |||||| ||||||||||| |
|
|
| T |
9319908 |
tacttgccatttccatcaaaagcattccgaagctatatacatcagccttgtaggatactcctccaatatttttgtagaacaattcaggagccatatatcc |
9320007 |
T |
|
| Q |
128 |
aatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatca |
227 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||| | || ||||| |||| ||||||| ||||| || |||||||| || | || || |||||| |
|
|
| T |
9320008 |
aattgttcctcttgctgcagttaaagtgacaatgctaatctcattaggataaagcttagcaagaccaaagtctgaaactttggggataaagttctcatca |
9320107 |
T |
|
| Q |
228 |
agaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |
|
|
| T |
9320108 |
agaaggatgttatggggcttgatatcaaa |
9320136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 277 - 375
Target Start/End: Original strand, 10983769 - 10983867
Alignment:
| Q |
277 |
atccattatgcaagtactcaatgcctcaagcaactccaagagaaatagcatgcaatttttcgcaacccaaataattactctcttcaatatgagaaaata |
375 |
Q |
| |
|
||||||||||||||||||||||||| | ||| || ||||||||||| |||||||||||||| |||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
10983769 |
atccattatgcaagtactcaatgccacgagccaccccaagagaaatggcatgcaatttttcacaactcaaggaattactctcttcattatgagaaaata |
10983867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 9350225 - 9350453
Alignment:
| Q |
28 |
tacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatcc |
127 |
Q |
| |
|
||||||| || ||||| || | ||| || |||||||| |||||||| ||||| |||| | |||| |||| ||||||| | ||||| ||||||||||| |
|
|
| T |
9350225 |
tacttgcgatttccatcaaaagcattccgaagctatatacatcagccttgtaggatactcctccaatatttttgtagaacaactcaggagccatatatcc |
9350324 |
T |
|
| Q |
128 |
aatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatca |
227 |
Q |
| |
|
||| |||||||||||||||||||| | |||||||| | || ||||| |||| ||||||| ||||| || |||||||| || | || || |||||| |
|
|
| T |
9350325 |
aattgttcctcttgctgcagttaaagtgacaatgctaatctcattaggataaagcttagcaagaccaaagtctgaaactttggggataaagttctcatca |
9350424 |
T |
|
| Q |
228 |
agaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |
|
|
| T |
9350425 |
agaaggatgttatggggcttgatatcaaa |
9350453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 8964511 - 8964746
Alignment:
| Q |
21 |
ttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggcca |
120 |
Q |
| |
|
|||||| ||| |||||||||||| || | ||||||||||||||| |||||||| || || || | | |||| |||| | ||||| | ||| || |||| |
|
|
| T |
8964511 |
ttccttttacctgccatctccatcaaaagcatcccaaagctataaacatcagccttataggacactcccccaatatttttatagaacaattctggagcca |
8964610 |
T |
|
| Q |
121 |
tatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaatt |
220 |
Q |
| |
|
||||||||||||| |||||||| || || | || |||||||| || ||| |||| | || |||| | |||||| ||||| |||||||| ||||||| |
|
|
| T |
8964611 |
tatatccaatggtacctcttgccgctgtcattgtgacaatgctattctctacaggatatagcttagccaatccaaagtcagagacttttggggtgaaatt |
8964710 |
T |
|
| Q |
221 |
ttcatcaagaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |
|
|
| T |
8964711 |
ctcatcaagaaggatgttgtgaggcttaatatcaaa |
8964746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 8999662 - 8999912
Alignment:
| Q |
21 |
ttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggcca |
120 |
Q |
| |
|
|||||| ||| |||||||||||| || | ||||||||||||||| |||||||| || ||||| | | |||| |||| | ||||| | ||| || |||| |
|
|
| T |
8999662 |
ttccttttacctgccatctccatcaaaagcatcccaaagctataaacatcagccttataagacactcccccaatatttttatagaacaattctggagcca |
8999761 |
T |
|
| Q |
121 |
tatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaatt |
220 |
Q |
| |
|
||||||||||||| |||||||| ||||| | || |||||||| || || ||| | || |||| | ||| || ||||| |||||||| |||| || |
|
|
| T |
8999762 |
tatatccaatggtacctcttgccgcagtcattgtgacaatgctattctccacgggatatagcttagccaatccgaagtcagagacttttggtgtgaagtt |
8999861 |
T |
|
| Q |
221 |
ttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcat |
271 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| |||| ||| ||||| |
|
|
| T |
8999862 |
ttcatcaagaaggatgttgtgaggcttgatatcaaaatgtaaaatcttcat |
8999912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 9318394 - 9318166
Alignment:
| Q |
28 |
tacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatcc |
127 |
Q |
| |
|
|||||||||| ||||| || | ||| ||||||||||| ||||| || ||||| |||| | |||| |||| ||||||| | |||||| ||||| ||||| |
|
|
| T |
9318394 |
tacttgccatttccatcaaaagcattccaaagctatatacatcggccttgtaggatactcctccaatatttttgtagaacaattcaggagccatgtatcc |
9318295 |
T |
|
| Q |
128 |
aatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatca |
227 |
Q |
| |
|
||| |||||||| ||||||||||| | |||||||| | || | ||| |||| | || || ||||| || |||||||| ||| | || || |||||| |
|
|
| T |
9318294 |
aattgttcctctagctgcagttaaagtgacaatgctaatgtcatttggataaagctttgccagaccaaagtctgaaactttgggaataaagttctcatca |
9318195 |
T |
|
| Q |
228 |
agaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |
|
|
| T |
9318194 |
agaaggatgttatggggcttgatatcaaa |
9318166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 273
Target Start/End: Complemental strand, 9453855 - 9453683
Alignment:
| Q |
101 |
gtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatca |
200 |
Q |
| |
|
|||||| | |||||| ||||| || ||||| |||||||||||||| || || | |||||||| || || ||||| |||| | ||||| |||||||| |
|
|
| T |
9453855 |
gtagaacaattcaggagccatgtaaccaattgttcctcttgctgctgtcaaagcgacaatgctattgtcaataggataaagctttgcaagaccaaaatct |
9453756 |
T |
|
| Q |
201 |
gaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatat |
273 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||| |||||||| |||||||| || | ||||| ||||| |
|
|
| T |
9453755 |
gaaactttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatat |
9453683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 273
Target Start/End: Original strand, 9399664 - 9399883
Alignment:
| Q |
54 |
ccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatccaatggttcctcttgctgcagttaatg |
153 |
Q |
| |
|
||||||||||| |||||||| || || |||||| |||| |||| | |||| |||||||| ||||| || ||||| |||||||||||||| | || | |
|
|
| T |
9399664 |
ccaaagctatacacatcagccttatatgatattcccccaatattttggaagaacagttcaggagccatgtaaccaattgttcctcttgctgccatcaaag |
9399763 |
T |
|
| Q |
154 |
acacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatc |
253 |
Q |
| |
|
|||||||||| || ||||| |||| | ||||| ||||| || |||||||| || |||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
9399764 |
tggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggatgaaattttcgtcaagaaggatgttgtgaggcttaatatc |
9399863 |
T |
|
| Q |
254 |
aaagtgtagaattttcatat |
273 |
Q |
| |
|
||| || | ||||| ||||| |
|
|
| T |
9399864 |
aaaatgcaaaatttgcatat |
9399883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 256
Target Start/End: Original strand, 9488538 - 9488784
Alignment:
| Q |
10 |
cattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatag |
109 |
Q |
| |
|
|||||| |||| | || ||||| ||||| |||||||||||||| ||||||||||| ||||| |||||||| |||| | |||| ||| | ||||| | |
|
|
| T |
9488538 |
cattcatgttccttctcctactcgccatttccattaacaacattccaaagctataaacatctgctttgtacgatactcctccaatattcttatagaacaa |
9488637 |
T |
|
| Q |
110 |
ttcaggggccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaactttt |
209 |
Q |
| |
|
||| || ||||| ||||| || ||||||||||| || || | ||||||||||| || || || ||| | | | || |||| |||||| ||||| ||| |
|
|
| T |
9488638 |
ttctggtgccatgtatcccatagttcctcttgcagctgtaagagacacaatgctattgtccgttggatataactttgctagtctaaaatctgaaaccttt |
9488737 |
T |
|
| Q |
210 |
ggattgaaattttcatcaagaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
||| |||| ||| | |||||||| ||||||||||||||||| ||||| |
|
|
| T |
9488738 |
ggagtgaagtttacgtcaagaagaatgttatgaggctttatgtcaaa |
9488784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 9384221 - 9384476
Alignment:
| Q |
18 |
ttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcagggg |
117 |
Q |
| |
|
||||||||| ||| |||||| ||||| || | ||| ||||||||||| |||||||| |||||||| | | |||| |||| ||||||| |||||||| | |
|
|
| T |
9384221 |
ttcttccttttacctgccatttccatcaaaagcattccaaagctatatacatcagccttgtaagacactccaccaatatttttgtagaacagttcaggag |
9384320 |
T |
|
| Q |
118 |
ccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaa |
217 |
Q |
| |
|
|||| || || | ||||||||||| |||||||| | |||||||| | | |||| | || | |||||||||||||| ||||| |||||| || |
|
|
| T |
9384321 |
ccatgtaacccaaagttcctcttgccgcagttaaggtaacaatgctatcgttcacaggatatagctttgcaagtccaaaatccgaaacctttggaacaaa |
9384420 |
T |
|
| Q |
218 |
attttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatat |
273 |
Q |
| |
|
| ||| || ||||| || ||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
9384421 |
ctcttcgtctagaagaatattatgaggcttgatatcaaaatgtagaatttgcatat |
9384476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 273
Target Start/End: Complemental strand, 9432945 - 9432696
Alignment:
| Q |
24 |
cttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatat |
123 |
Q |
| |
|
||||||||||| || || || || | ||| ||||| ||||| ||||| || |||| |||||| |||| |||| |||||| | |||||| ||||| | |
|
|
| T |
9432945 |
cttctacttgcgatttcaatcaaaagcattccaaaactatacacatcggccttgtgtgatattctcccaatattttggtagaacaattcaggagccatgt |
9432846 |
T |
|
| Q |
124 |
atccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttc |
223 |
Q |
| |
|
| ||||| |||||||||||||| || || | |||||||||| || ||||| |||| | ||||| ||||| || |||||||| || |||||||||| |
|
|
| T |
9432845 |
aaccaattgttcctcttgctgccgtcaaagtggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggatgaaattttc |
9432746 |
T |
|
| Q |
224 |
atcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatat |
273 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||| || | ||||| ||||| |
|
|
| T |
9432745 |
gtccagaaggatgttgtgaggcttaatatcaaaatgcaaaatttgcatat |
9432696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 9234005 - 9233918
Alignment:
| Q |
186 |
gcaagtccaaaatcagaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaagtgtagaattttcatat |
273 |
Q |
| |
|
|||||||||||||| ||||| |||||| ||||| ||| || ||||| || ||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
9234005 |
gcaagtccaaaatccgaaacctttggaacgaaatcttcgtctagaagaatattatgaggcttgatatcaaaatgtagaatttgcatat |
9233918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 9082641 - 9082523
Alignment:
| Q |
30 |
cttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatccaa |
129 |
Q |
| |
|
|||||||||||||| || | ||||||||| ||||| |||||||| ||||| || | | || | |||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
9082641 |
cttgccatctccatcaaaagcatcccaaaactataaacatcagccttgtacgacactccccctatatttttgtagaataactcaggagccatatatccaa |
9082542 |
T |
|
| Q |
130 |
tggttcctcttgctgcagt |
148 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
9082541 |
ttgtacctcttgctgcagt |
9082523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 9096909 - 9096793
Alignment:
| Q |
32 |
tgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatccaatg |
131 |
Q |
| |
|
|||||||||||| || | ||||||||||||||| ||||||||||| || || | | |||| |||| ||||||| | ||| || |||||||||||||| |
|
|
| T |
9096909 |
tgccatctccatcaaaagcatcccaaagctataaacatcagctttataggaaactcccccaatatttttgtagaacaattctggagccatatatccaatt |
9096810 |
T |
|
| Q |
132 |
gttcctcttgctgcagt |
148 |
Q |
| |
|
|| |||||||| ||||| |
|
|
| T |
9096809 |
gtacctcttgcagcagt |
9096793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 8874083 - 8873944
Alignment:
| Q |
117 |
gccatatatccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattga |
216 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| | || |||||||| || || |||| | || |||| | |||||| ||||| ||||| ||| | | |
|
|
| T |
8874083 |
gccatatatccaatggtacctcttgccgcagtcattgtgacaatgctattctccacaggatatagcttagccaatccaaagtcagagactttcggagtaa |
8873984 |
T |
|
| Q |
217 |
aattttcatcaagaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
| || ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
8873983 |
agttctcatcaagaaggatgttgtgaggcttaatatcaaa |
8873944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 256
Target Start/End: Complemental strand, 9486297 - 9486065
Alignment:
| Q |
24 |
cttctacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatat |
123 |
Q |
| |
|
|||||||||||||| || || || | ||| ||||||||||| | ||||| ||||| |||||| || | |||| |||||| | |||||| ||||| | |
|
|
| T |
9486297 |
cttctacttgccatttcaatcaaaagcattccaaagctatacatgtcagccttgtatgatattcctccgatattttggtagaacaattcaggagccatgt |
9486198 |
T |
|
| Q |
124 |
atccaatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttc |
223 |
Q |
| |
|
| || || |||||||||||||| || || | |||||||||| || ||||| |||| | ||||| ||||| || |||||||| || |||||||| |
|
|
| T |
9486197 |
aaccgattgttcctcttgctgctgtcaaggtggcaatgcttttgtcaataggataaagctttgcaagaccaaagtccgaaactttagggacaaaattttc |
9486098 |
T |
|
| Q |
224 |
atcaagaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| |
|
|
| T |
9486097 |
gtcaagaagaatgttgtgaggcttaatatcaaa |
9486065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 9464285 - 9464352
Alignment:
| Q |
189 |
agtccaaaatcagaaacttttggattgaaattttcatcaagaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
|||| |||||| ||||| |||||| |||| ||| | |||||||| ||||||||||||||||| ||||| |
|
|
| T |
9464285 |
agtcaaaaatccgaaacctttggagtgaagtttacgtcaagaagaatgttatgaggctttatgtcaaa |
9464352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 319
Target Start/End: Complemental strand, 15927300 - 15927009
Alignment:
| Q |
28 |
tacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatcc |
127 |
Q |
| |
|
|||||||||| ||||| || | ||| ||||||||||| ||||| || || || || | | |||| |||| ||||||||| |||||| ||||| ||||| |
|
|
| T |
15927300 |
tacttgccatttccatcaaaagcattccaaagctatatacatcggccttatacgaaactcctccaatatttttgtagaataattcaggagccatgtatcc |
15927201 |
T |
|
| Q |
128 |
aatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatca |
227 |
Q |
| |
|
||| |||||||||||||||||||| | ||||| || | || ||||| |||| | ||||| ||||| || |||||||| || | || || |||||| |
|
|
| T |
15927200 |
aatcgttcctcttgctgcagttaaagtgacaatactaatctcattaggataaagctttgcaagaccaaagtcggaaactttggggataaagttctcatca |
15927101 |
T |
|
| Q |
228 |
agaaggatgttatgaggctttatatcaaagtgtagaattttcatattatatccattatgcaagtactcaatgcctcaagcaactccaagaga |
319 |
Q |
| |
|
|||||||||||||| ||||| || ||||| || | ||||| ||| ||| |||| | ||| ||||| | || || | ||||||||||||||| |
|
|
| T |
15927100 |
agaaggatgttatggggcttgatgtcaaaatgcaaaatttgcatgttacatccttgatgtaagtaagccataccacgagcaactccaagaga |
15927009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 9159598 - 9159826
Alignment:
| Q |
28 |
tacttgccatctccattaacaacatcccaaagctatagacatcagctttgtaagatattgagccaacatttctgtagaatagttcaggggccatatatcc |
127 |
Q |
| |
|
|||||||||| ||||| || | ||| ||||| ||||| |||||||| ||||| |||| | |||| |||| ||||||| | || || |||||||| || |
|
|
| T |
9159598 |
tacttgccatttccatcaaaagcattccaaaactataaacatcagccttgtatgatactccaccaatatttttgtagaacaactcgggagccatataacc |
9159697 |
T |
|
| Q |
128 |
aatggttcctcttgctgcagttaatgacacaatgcttttatctgtaggacaaagtctagcaagtccaaaatcagaaacttttggattgaaattttcatca |
227 |
Q |
| |
|
||| |||||||||||||||||||| ||||| || || || ||||| |||| | ||||| ||||| |||||||| || || | || || || ||| |
|
|
| T |
9159698 |
aattgttcctcttgctgcagttaaatttacaatactattgtcattaggataaagctttgcaagaccaaagtcagaaaccttggggataaagttctcgtca |
9159797 |
T |
|
| Q |
228 |
agaaggatgttatgaggctttatatcaaa |
256 |
Q |
| |
|
||||| |||||||| ||||| |||||||| |
|
|
| T |
9159798 |
agaagtatgttatggggcttgatatcaaa |
9159826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 40225245 - 40225285
Alignment:
| Q |
186 |
gcaagtccaaaatcagaaacttttggattgaaattttcatc |
226 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
40225245 |
gcaagtccaaaatcagagagttttggattgaaattttcatc |
40225285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 27692614 - 27692659
Alignment:
| Q |
216 |
aaattttcatcaagaaggatgttatgaggctttatatcaaagtgta |
261 |
Q |
| |
|
||||| || |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
27692614 |
aaattctcgtcaagaagaatgttatgaggttttatatcaaagtgta |
27692659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 7945933 - 7945893
Alignment:
| Q |
186 |
gcaagtccaaaatcagaaacttttggattgaaattttcatc |
226 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
7945933 |
gcaagaccaaaatcagaaagctttggattgaaattttcatc |
7945893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University