View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7343_low_5 (Length: 317)

Name: NF7343_low_5
Description: NF7343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7343_low_5
NF7343_low_5
[»] chr4 (49 HSPs)
chr4 (12-309)||(52568151-52568448)
chr4 (31-175)||(26329921-26330066)
chr4 (15-142)||(31229293-31229421)
chr4 (24-175)||(52181720-52181872)
chr4 (23-198)||(8408826-8409003)
chr4 (54-181)||(26330005-26330132)
chr4 (15-175)||(5387131-5387292)
chr4 (58-181)||(43098414-43098537)
chr4 (16-176)||(52183392-52183544)
chr4 (55-181)||(22025301-22025426)
chr4 (57-173)||(9320017-9320133)
chr4 (28-138)||(22025095-22025206)
chr4 (69-176)||(41735816-41735923)
chr4 (69-176)||(43098365-43098472)
chr4 (20-170)||(19681203-19681350)
chr4 (69-172)||(2788928-2789031)
chr4 (54-141)||(2788973-2789060)
chr4 (63-171)||(35046437-35046545)
chr4 (15-117)||(52567746-52567849)
chr4 (60-138)||(26329805-26329883)
chr4 (31-181)||(43098181-43098328)
chr4 (88-176)||(19631767-19631855)
chr4 (59-141)||(35046550-35046632)
chr4 (88-181)||(2788789-2788882)
chr4 (26-129)||(8408393-8408497)
chr4 (105-176)||(26329936-26330007)
chr4 (54-181)||(41735752-41735878)
chr4 (69-173)||(2909182-2909286)
chr4 (85-173)||(22025271-22025358)
chr4 (23-117)||(19632212-19632306)
chr4 (58-139)||(36890450-36890533)
chr4 (39-117)||(42116050-42116129)
chr4 (69-149)||(36890502-36890583)
chr4 (28-112)||(36890618-36890703)
chr4 (68-181)||(52865955-52866068)
chr4 (69-112)||(52866367-52866410)
chr4 (15-53)||(30543095-30543133)
chr4 (59-112)||(2508270-2508323)
chr4 (20-112)||(5387584-5387677)
chr4 (108-176)||(52181779-52181847)
chr4 (32-126)||(35023955-35024050)
chr4 (105-176)||(52567747-52567818)
chr4 (105-175)||(8408407-8408477)
chr4 (20-81)||(44915937-44915999)
chr4 (108-173)||(9320077-9320142)
chr4 (23-67)||(19631871-19631916)
chr4 (105-181)||(19632235-19632310)
chr4 (105-181)||(35023745-35023821)
chr4 (124-172)||(35046555-35046603)
[»] chr8 (65 HSPs)
chr8 (23-172)||(9276960-9277109)
chr8 (30-181)||(9770768-9770920)
chr8 (20-175)||(30576632-30576788)
chr8 (28-176)||(36359904-36360053)
chr8 (28-181)||(45017745-45017899)
chr8 (15-175)||(23553359-23553520)
chr8 (24-198)||(9276462-9276639)
chr8 (20-176)||(39701365-39701522)
chr8 (9-181)||(44041249-44041422)
chr8 (15-176)||(39700888-39701050)
chr8 (20-175)||(25730095-25730252)
chr8 (15-181)||(16197027-16197194)
chr8 (28-181)||(29794238-29794392)
chr8 (23-181)||(8713844-8714003)
chr8 (15-176)||(25737107-25737269)
chr8 (20-173)||(25737581-25737736)
chr8 (31-181)||(30576150-30576301)
chr8 (68-176)||(40553260-40553368)
chr8 (68-175)||(11113555-11113662)
chr8 (54-173)||(43422864-43422983)
chr8 (54-181)||(43423100-43423226)
chr8 (15-172)||(31169452-31169609)
chr8 (60-182)||(36360088-36360210)
chr8 (68-175)||(9770565-9770672)
chr8 (24-117)||(13771843-13771937)
chr8 (20-173)||(23553840-23553994)
chr8 (24-175)||(8714330-8714482)
chr8 (61-181)||(40553313-40553433)
chr8 (69-173)||(41190293-41190397)
chr8 (20-141)||(4613778-4613900)
chr8 (68-181)||(14871368-14871482)
chr8 (20-141)||(40552800-40552922)
chr8 (20-112)||(13771425-13771518)
chr8 (88-181)||(29792559-29792652)
chr8 (9-112)||(5358650-5358754)
chr8 (68-176)||(6236250-6236358)
chr8 (61-148)||(39700856-39700943)
chr8 (69-176)||(43422921-43423028)
chr8 (60-181)||(45017934-45018053)
chr8 (97-181)||(36314697-36314781)
chr8 (23-117)||(35433899-35433994)
chr8 (31-117)||(35434313-35434400)
chr8 (50-117)||(36360138-36360205)
chr8 (60-129)||(9770662-9770731)
chr8 (32-172)||(16208674-16208815)
chr8 (25-117)||(34686875-34686968)
chr8 (88-141)||(43423074-43423127)
chr8 (15-115)||(6235793-6235895)
chr8 (61-115)||(9277058-9277112)
chr8 (108-181)||(13771868-13771941)
chr8 (105-181)||(35434328-35434404)
chr8 (70-117)||(23179049-23179096)
chr8 (105-176)||(23553418-23553489)
chr8 (105-176)||(30576658-30576729)
chr8 (50-117)||(36359903-36359970)
chr8 (20-81)||(44040860-44040922)
chr8 (104-181)||(29030175-29030252)
chr8 (105-194)||(44040808-44040896)
chr8 (57-117)||(25737106-25737166)
chr8 (57-117)||(31169555-31169614)
chr8 (61-117)||(39701467-39701523)
chr8 (49-117)||(43423154-43423222)
chr8 (55-117)||(14871416-14871478)
chr8 (61-105)||(9770575-9770619)
chr8 (105-177)||(39701391-39701463)
[»] chr2 (35 HSPs)
chr2 (15-181)||(36196462-36196627)
chr2 (15-181)||(27893519-27893686)
chr2 (23-195)||(31264125-31264301)
chr2 (25-141)||(19080667-19080784)
chr2 (30-175)||(34336039-34336185)
chr2 (57-190)||(30907063-30907196)
chr2 (55-181)||(31263923-31264049)
chr2 (60-176)||(30907137-30907253)
chr2 (28-181)||(30907288-30907440)
chr2 (69-171)||(37542956-37543057)
chr2 (50-140)||(39376401-39376491)
chr2 (20-140)||(11871714-11871835)
chr2 (68-176)||(27893038-27893146)
chr2 (57-172)||(8260392-8260507)
chr2 (15-112)||(20535509-20535608)
chr2 (58-200)||(34336276-34336419)
chr2 (56-181)||(16781049-16781175)
chr2 (21-125)||(15506040-15506145)
chr2 (69-176)||(31263988-31264095)
chr2 (69-176)||(34429684-34429791)
chr2 (68-175)||(41265257-41265364)
chr2 (22-117)||(42117172-42117268)
chr2 (103-172)||(19081055-19081124)
chr2 (68-141)||(20535966-20536039)
chr2 (76-173)||(37543100-37543197)
chr2 (69-177)||(34336227-34336335)
chr2 (54-112)||(30907081-30907139)
chr2 (88-129)||(37543048-37543089)
chr2 (54-117)||(31263927-31263990)
chr2 (50-112)||(19081062-19081124)
chr2 (68-129)||(5116895-5116956)
chr2 (15-67)||(27893138-27893191)
chr2 (68-181)||(39376172-39376284)
chr2 (69-129)||(5116946-5117006)
chr2 (46-117)||(34429683-34429755)
[»] chr6 (37 HSPs)
chr6 (15-176)||(10862545-10862708)
chr6 (28-172)||(32417684-32417829)
chr6 (28-172)||(32423525-32423670)
chr6 (15-181)||(11527535-11527693)
chr6 (50-172)||(16168685-16168807)
chr6 (20-141)||(17180102-17180224)
chr6 (34-176)||(20575416-20575559)
chr6 (68-181)||(16168464-16168577)
chr6 (58-181)||(32417468-32417591)
chr6 (58-181)||(32423309-32423432)
chr6 (15-175)||(24139466-24139626)
chr6 (68-194)||(9902277-9902404)
chr6 (69-176)||(16168644-16168751)
chr6 (23-172)||(10962746-10962896)
chr6 (59-129)||(20575600-20575670)
chr6 (68-181)||(2839624-2839737)
chr6 (68-176)||(2840064-2840172)
chr6 (15-142)||(17179662-17179790)
chr6 (15-169)||(9946672-9946818)
chr6 (15-181)||(28630584-28630742)
chr6 (20-117)||(9901962-9902060)
chr6 (68-173)||(20575660-20575763)
chr6 (25-141)||(11528013-11528130)
chr6 (69-172)||(32417537-32417640)
chr6 (69-172)||(32423378-32423481)
chr6 (20-112)||(10407317-10407410)
chr6 (105-173)||(11528034-11528102)
chr6 (105-200)||(9901939-9902034)
chr6 (24-112)||(10407709-10407799)
chr6 (105-182)||(10407307-10407384)
chr6 (46-117)||(2839628-2839700)
chr6 (57-117)||(2840113-2840173)
chr6 (20-106)||(17132178-17132265)
chr6 (105-176)||(17180128-17180199)
chr6 (54-117)||(20575415-20575478)
chr6 (121-176)||(20575602-20575657)
chr6 (73-117)||(10862665-10862709)
[»] chr1 (34 HSPs)
chr1 (23-181)||(48352708-48352867)
chr1 (15-172)||(27351059-27351217)
chr1 (58-195)||(29419051-29419189)
chr1 (23-181)||(10686680-10686839)
chr1 (15-138)||(8902803-8902927)
chr1 (15-175)||(34254504-34254665)
chr1 (54-175)||(44964072-44964192)
chr1 (28-181)||(1765693-1765846)
chr1 (21-176)||(10685852-10685999)
chr1 (75-181)||(11897841-11897947)
chr1 (58-199)||(17898850-17898992)
chr1 (28-141)||(44963878-44963992)
chr1 (68-175)||(49650578-49650686)
chr1 (58-172)||(1765930-1766044)
chr1 (62-176)||(17898794-17898908)
chr1 (68-138)||(49651013-49651083)
chr1 (23-142)||(4772612-4772723)
chr1 (68-181)||(27351547-27351660)
chr1 (60-172)||(44964018-44964130)
chr1 (69-172)||(1765881-1765984)
chr1 (54-117)||(11897845-11897908)
chr1 (25-112)||(39302339-39302427)
chr1 (15-105)||(48352272-48352366)
chr1 (94-141)||(4030342-4030390)
chr1 (105-177)||(27351114-27351186)
chr1 (15-117)||(8903237-8903340)
chr1 (55-128)||(34254998-34255070)
chr1 (29-112)||(2965499-2965583)
chr1 (105-181)||(8903268-8903344)
chr1 (50-117)||(10685851-10685918)
chr1 (68-120)||(4772171-4772223)
chr1 (105-177)||(8902824-8902896)
chr1 (61-117)||(27351054-27351110)
chr1 (61-117)||(39302753-39302809)
[»] chr7 (80 HSPs)
chr7 (15-175)||(35214811-35214973)
chr7 (15-193)||(1441400-1441571)
chr7 (30-173)||(19925311-19925455)
chr7 (20-176)||(5559111-5559270)
chr7 (68-173)||(31893257-31893362)
chr7 (33-176)||(5805042-5805186)
chr7 (54-181)||(33879514-33879641)
chr7 (58-175)||(21433149-21433266)
chr7 (15-181)||(1286369-1286534)
chr7 (30-176)||(23150643-23150790)
chr7 (15-176)||(27995065-27995227)
chr7 (22-175)||(28256498-28256652)
chr7 (15-172)||(33235042-33235200)
chr7 (15-176)||(39959152-39959314)
chr7 (22-173)||(1349114-1349269)
chr7 (68-181)||(5559630-5559742)
chr7 (22-181)||(20366048-20366206)
chr7 (31-141)||(34951266-34951377)
chr7 (20-129)||(10619851-10619961)
chr7 (69-175)||(22876867-22876972)
chr7 (24-141)||(31175924-31176042)
chr7 (57-194)||(40904677-40904814)
chr7 (33-175)||(1346485-1346624)
chr7 (68-194)||(31893488-31893615)
chr7 (20-181)||(8039662-8039807)
chr7 (28-181)||(21413081-21413234)
chr7 (23-175)||(35215290-35215443)
chr7 (57-181)||(21412865-21412989)
chr7 (23-129)||(23679497-23679603)
chr7 (58-176)||(36566282-36566400)
chr7 (28-172)||(20101831-20101974)
chr7 (68-181)||(28256949-28257062)
chr7 (58-129)||(21433337-21433408)
chr7 (23-141)||(33235518-33235637)
chr7 (91-181)||(39958686-39958776)
chr7 (59-175)||(21412931-21413047)
chr7 (69-181)||(34951475-34951587)
chr7 (54-141)||(5805592-5805679)
chr7 (15-172)||(20183778-20183935)
chr7 (69-175)||(41020137-41020242)
chr7 (60-141)||(4187545-4187626)
chr7 (60-172)||(21433278-21433391)
chr7 (23-141)||(42990539-42990658)
chr7 (15-176)||(8040114-8040266)
chr7 (68-133)||(10620238-10620303)
chr7 (56-181)||(19925104-19925228)
chr7 (40-176)||(20366521-20366658)
chr7 (60-141)||(36566377-36566458)
chr7 (30-129)||(4187663-4187763)
chr7 (32-130)||(6220351-6220449)
chr7 (69-176)||(33879470-33879576)
chr7 (20-86)||(1286768-1286834)
chr7 (121-175)||(1441011-1441065)
chr7 (24-117)||(28104300-28104394)
chr7 (15-91)||(27995538-27995615)
chr7 (60-112)||(1441014-1441066)
chr7 (83-202)||(5075325-5075444)
chr7 (54-117)||(5805041-5805104)
chr7 (58-170)||(29591057-29591171)
chr7 (105-176)||(35214871-35214942)
chr7 (105-175)||(19925327-19925397)
chr7 (69-175)||(34951415-34951521)
chr7 (94-176)||(40904755-40904837)
chr7 (57-117)||(5559110-5559171)
chr7 (105-198)||(28104279-28104372)
chr7 (69-129)||(31893438-31893498)
chr7 (74-142)||(33879349-33879417)
chr7 (105-176)||(5805583-5805654)
chr7 (102-177)||(21433207-21433282)
chr7 (105-176)||(31175946-31176017)
chr7 (54-117)||(31893534-31893597)
chr7 (105-176)||(34951291-34951362)
chr7 (54-117)||(36566281-36566344)
chr7 (68-111)||(36566525-36566568)
chr7 (54-112)||(31893258-31893316)
chr7 (54-115)||(33235039-33235100)
chr7 (121-173)||(4187573-4187625)
chr7 (105-173)||(10619867-10619935)
chr7 (69-117)||(27995064-27995112)
chr7 (61-117)||(34951527-34951583)
[»] chr5 (42 HSPs)
chr5 (22-172)||(36418365-36418516)
chr5 (23-181)||(20728527-20728686)
chr5 (27-181)||(13543083-13543241)
chr5 (23-175)||(30738223-30738377)
chr5 (15-142)||(18248996-18249124)
chr5 (15-141)||(5734502-5734628)
chr5 (28-194)||(6336298-6336458)
chr5 (20-176)||(5734944-5735100)
chr5 (60-173)||(32660266-32660379)
chr5 (21-141)||(30737779-30737900)
chr5 (60-176)||(6336147-6336263)
chr5 (23-117)||(32459430-32459525)
chr5 (69-195)||(35189898-35190024)
chr5 (54-176)||(18951307-18951429)
chr5 (68-173)||(26275511-26275616)
chr5 (54-141)||(32660238-32660325)
chr5 (20-181)||(13538468-13538625)
chr5 (68-175)||(36417891-36417998)
chr5 (24-181)||(13543569-13543727)
chr5 (23-112)||(20729010-20729100)
chr5 (94-175)||(38405573-38405654)
chr5 (25-108)||(18238306-18238390)
chr5 (15-112)||(35891219-35891317)
chr5 (68-117)||(31813954-31814003)
chr5 (33-176)||(1722504-1722648)
chr5 (57-117)||(18951306-18951366)
chr5 (70-141)||(35190426-35190497)
chr5 (58-181)||(14235567-14235688)
chr5 (105-181)||(32459426-32459502)
chr5 (54-117)||(6336146-6336209)
chr5 (105-176)||(36418389-36418460)
chr5 (94-175)||(18951368-18951449)
chr5 (23-175)||(19278710-19278862)
chr5 (24-112)||(32459822-32459911)
chr5 (15-125)||(1722933-1723044)
chr5 (57-112)||(26275512-26275567)
chr5 (20-112)||(26275971-26276055)
chr5 (105-172)||(30737808-30737875)
chr5 (54-117)||(36418458-36418521)
chr5 (61-112)||(38405600-38405651)
chr5 (23-112)||(18237920-18238010)
chr5 (58-112)||(31813894-31813948)
[»] chr3 (20 HSPs)
chr3 (15-197)||(31247602-31247786)
chr3 (15-141)||(4276174-4276301)
chr3 (93-176)||(21377036-21377119)
chr3 (20-142)||(35555565-35555688)
chr3 (94-195)||(50530230-50530332)
chr3 (68-129)||(4276628-4276689)
chr3 (21-181)||(3088066-3088218)
chr3 (15-181)||(21376565-21376732)
chr3 (73-175)||(14964648-14964749)
chr3 (25-112)||(19153885-19153974)
chr3 (28-112)||(54456679-54456764)
chr3 (60-173)||(54456799-54456912)
chr3 (105-199)||(54456651-54456746)
chr3 (15-112)||(31247195-31247292)
chr3 (15-117)||(14629288-14629382)
chr3 (24-105)||(21410273-21410355)
chr3 (30-112)||(24707475-24707558)
chr3 (57-137)||(5505741-5505822)
chr3 (69-175)||(5505692-5505800)
chr3 (46-141)||(54456844-54456940)
[»] scaffold0070 (2 HSPs)
scaffold0070 (20-176)||(28548-28705)
scaffold0070 (46-117)||(28547-28619)
[»] scaffold0019 (4 HSPs)
scaffold0019 (50-181)||(124351-124482)
scaffold0019 (88-176)||(124329-124417)
scaffold0019 (60-181)||(124142-124262)
scaffold0019 (55-117)||(124146-124208)
[»] scaffold0746 (3 HSPs)
scaffold0746 (20-141)||(498-620)
scaffold0746 (15-176)||(25-186)
scaffold0746 (105-176)||(524-595)
[»] scaffold0041 (2 HSPs)
scaffold0041 (57-194)||(45204-45341)
scaffold0041 (94-176)||(45181-45263)
[»] scaffold0027 (2 HSPs)
scaffold0027 (20-196)||(9377-9546)
scaffold0027 (74-176)||(9891-9993)
[»] scaffold0374 (3 HSPs)
scaffold0374 (20-117)||(16176-16274)
scaffold0374 (15-112)||(16565-16663)
scaffold0374 (105-181)||(16172-16248)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 309
Target Start/End: Original strand, 52568151 - 52568448
Alignment:
Q  12 atggacatcaggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaa 111  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||    
T  52568151 atggacatcaggggtaacggtgaaatagtttatcaactaaaggatctatttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaa 52568250  T
Q  112 atgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaatataatagtaatt 211  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  52568251 atgacctaattgaaacttttgaaatttaaagtactaaattgggagttatgtcaaactaaaatgactaaaatgatttttgacctaaaatataatagtaact 52568350  T
Q  212 tcgtcaagtagtctagtgactggaacccacatttttatgtatgaataaatgagagtttgagtttgaatctttatccgtgtatatattatgtgatgtcc 309  Q
    || ||||||||||||||| || || |||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||    
T  52568351 tcatcaagtagtctagtggctagagcccatatttttatgtatgaataaatgagagtgtgagtttgaatctttacccatgtatatattatgtaatgtcc 52568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 26329921 - 26330066
Alignment:
Q  31 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  26329921 gtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacctatttgaaactt 26330020  T
Q  130 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    | ||||||||||  ||||| |||||| || ||| ||||||||||||    
T  26330021 ttgaaacttaaaggactaacttgggaattctgtaaaactaaaagga 26330066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 31229421 - 31229293
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||     
T  31229421 gacagcagaggtaacggtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaacttaaatgactaacttgagaattctatcaaactaaaaa 31229322  T
Q  114 gacctaattgaaactttcgaaacttaaaa 142  Q
    ||||||| |||||||||||||||||||||    
T  31229321 gacctaagtgaaactttcgaaacttaaaa 31229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 52181872 - 52181720
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||| | |||    
T  52181872 ggtaacggtgaaatagtttatcaattaaaatgacatgtttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacatgatt 52181773  T
Q  123 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||||||||| ||| |||||  ||||| ||| || || ||||||||||||||||    
T  52181772 gaaactttcaaaatttaaagaactaacttgagaattttgtcaaactaaaagga 52181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 8408826 - 8409003
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||| ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||  || | ||    
T  8408826 gggtagcggtgaaatagtttatcaactaagatgacctatttgaaacttttgaaacttaaatgactaacttgaaaattctgtcaaactaaaagaacatcat 8408925  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaaa 198  Q
    ||||| ||||||||||||||  ||||| ||| || |||||||||||||||| ||| |||| |||| ||||||| ||||    
T  8408926 tgaaattttcgaaacttaaatgactaacttgagaattatgtcaaactaaaatgaccaaaagtgatatttgaccaaaaa 8409003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 26330005 - 26330132
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||| || ||||||||||||||| |||||||||  ||||| |||     
T  26330005 gacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtaaaactaaaaggatctaattgaaactttcaaaacttaaaggactaacttga 26330104  T
Q  154 gagttatgtcaaactaaaaggactaaaa 181  Q
    || || ||||||||||||||||||||||    
T  26330105 gaattctgtcaaactaaaaggactaaaa 26330132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 5387292 - 5387131
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||| ||||||||| ||||| || ||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  5387292 gacagcaggggtaacggtgaaattgtttatcaactaaaaagatctatttgaaacttttgaaacttaaagggctaacttgggaattctgtcaaactaaaat 5387193  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||  |||||||||||||  |||||||||  ||||| || | | ||  |||||||||||||||    
T  5387192 gatataattgaaacttttaaaacttaaaggactaacttagaaattcagtcaaactaaaagga 5387131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 43098414 - 43098537
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||| || | | |    
T  43098414 tatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacctaattgaaactttcgaaacttaaagaactaagttagaaat 43098513  T
Q  158 tatgtcaaactaaaaggactaaaa 181  Q
    | ||||||||||||||||| ||||    
T  43098514 tctgtcaaactaaaaggaccaaaa 43098537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 52183392 - 52183544
Alignment:
Q  16 acatcaggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatg 114  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||         |||||||||| ||||| |||||||||||||||||||||||| |    
T  52183392 acatcaggggtaacggtgaaatagtttatcaacttaaaaaacttattt---------gaaacttaaaggactggcttgggaattctgtcaaactaaaagg 52183482  T
Q  115 acctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
     ||||||||||||||||||||||||||  ||||| ||| || || ||| |||||||||||||    
T  52183483 gcctaattgaaactttcgaaacttaaaggactaacttgagaattttgtaaaactaaaaggac 52183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 22025301 - 22025426
Alignment:
Q  55 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggg 154  Q
    ||||||||||||| |||||| |||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||  ||||| |||      
T  22025301 acctatttgaaacctttgaa-cttaaaggactaacttgggaattctgtcaaactaaaagaacctaattgaaactttcgaaacttcaaggactaacttgat 22025399  T
Q  155 agttatgtcaaactaaaaggactaaaa 181  Q
    | |||||||||||||||| ||||||||    
T  22025400 aattatgtcaaactaaaatgactaaaa 22025426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 9320133 - 9320017
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    ||||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||  || ||||||||||||||||||||||||| ||||| ||| ||     
T  9320133 ctatttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaagaacttaattgaaactttcgaaacttaaaaaactaacttgagaa 9320034  T
Q  157 ttatgtcaaactaaaag 173  Q
    || ||||||||||||||    
T  9320033 ttttgtcaaactaaaag 9320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 22025206 - 22025095
Alignment:
Q  28 acggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||  |||| ||||  |||||||||||||||||||||||||||||||||    
T  22025206 acggtgaaatagtttatcaactaaaagaacctatttgaaactttttaatcttaacggactaacttaagaattctgtcaaactaaaatgacctaattgaaa 22025107  T
Q  127 ctttcgaaactt 138  Q
    |||||| |||||    
T  22025106 ctttcgtaactt 22025095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 41735923 - 41735816
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||  ||||| |||||| |||||| |||||    
T  41735923 tttgaaatttaaaggactgacttggaaattctgtcaaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaact 41735824  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  41735823 aaaaggac 41735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 43098365 - 43098472
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||| || |||||||||| ||||||||||  ||||| |||||| || |||||||||    
T  43098365 tttgaaacttaaaggactaacttgggaattctgttaaactaaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaact 43098464  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  43098465 aaaaggac 43098472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 19681350 - 19681203
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| | |||| | ||||||     ||||| ||||||||||||||||||||||| ||    
T  19681350 caggggtaatggtgaaatagtttatcaactaaaatgacctatttgaatcctttgcaccttaaa----ggacttcggaattctgtcaaactaaaatgatct 19681255  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaa 170  Q
    |||||||| ||||||||||||||| ||||| ||| || ||  ||||||||||    
T  19681254 aattgaaaatttcgaaacttaaaaaactaacttgagaattcggtcaaactaa 19681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 2788928 - 2789031
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| |||  | || |||||||||    
T  2788928 tttgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaact 2789027  T
Q  169 aaaa 172  Q
    ||||    
T  2789028 aaaa 2789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 2788973 - 2789060
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||||||||| ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||| | |||||||||    
T  2788973 gacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacctaattgaaacttccaaaacttaaa 2789060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 35046545 - 35046437
Alignment:
Q  63 gaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgt 162  Q
    ||||| ||||||||||||| |||| | || |||||||||||||||||||| || |||||| ||||||||||||||||||  |||||||||  | ||||||    
T  35046545 gaaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatctaattaaaactttcgaaacttaaaggactaaattgaaaattatgt 35046446  T
Q  163 caaactaaa 171  Q
    |||||||||    
T  35046445 caaactaaa 35046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 52567849 - 52567746
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||| ||||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |||||||||||||||||||     
T  52567849 gacagcaggagtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaag 52567750  T
Q  114 gacc 117  Q
    ||||    
T  52567749 gacc 52567746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 26329883 - 26329805
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 138  Q
    |||||||| ||||||||||||| | || |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  26329883 tttgaaacttttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaactt 26329805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 43098328 - 43098181
Alignment:
Q  31 gtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||    |||| |||| |||| ||||  ||||||||| ||||||||||||||||    
T  43098328 gtgaaatagtttatcaactaaaaggacttatttgaaacttttgaaactt----gactaacttcggaactctggtaaactaaaaggacctaattgaaactt 43098233  T
Q  130 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    || |||||||||  ||||| || | | || ||||||||||||||||| ||||    
T  43098232 tcaaaacttaaaggactaacttagaaattttgtcaaactaaaaggaccaaaa 43098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 19631855 - 19631767
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || || ||||||| |||||||||    
T  19631855 acttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaaataaaaggac 19631767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 35046550 - 35046632
Alignment:
Q  59 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  35046550 atttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatggccaaattaaaactttcgaaacttaaa 35046632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 2788882 - 2788789
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || ||   |||||||||||||| |||||    
T  2788882 acttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaatttcatcaaactaaaaggattaaaa 2788789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 8408497 - 8408393
Alignment:
Q  26 taacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattga 124  Q
    |||||||||||||| ||||||| ||||| ||| |||||||||| ||| ||||||||| |||| ||||| ||||| ||||||||||||| || ||| ||||    
T  8408497 taacggtgaaatagcttatcaactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaaggatctatttga 8408398  T
Q  125 aactt 129  Q
    |||||    
T  8408397 aactt 8408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 26329936 - 26330007
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||| |||||||||| ||||||||||  ||||| |||||| ||||||||||||||||||||    
T  26329936 aactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggac 26330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 41735878 - 41735752
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| ||| ||||||||| |||| | ||||||||||| ||||| |||  ||||| |||     
T  41735878 gacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaactaaaaggacc-agttgaaactttcaaaactaaaagaactaacttga 41735780  T
Q  154 gagttatgtcaaactaaaaggactaaaa 181  Q
    || |  ||| ||||||||||||| ||||    
T  41735779 gaatcttgttaaactaaaaggaccaaaa 41735752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 2909286 - 2909182
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||| ||||| |||| ||||| ||||||||| |||||||||  |||||||||| ||||||||||||||||  ||||| ||| || || ||| |||||    
T  2909286 tttgaaatttaaaggactaacttgagaattctgtaaaactaaaagaacctaattgacactttcgaaacttaaagaactaacttgagaattctgtgaaact 2909187  T
Q  169 aaaag 173  Q
    |||||    
T  2909186 aaaag 2909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 22025271 - 22025358
Alignment:
Q  85 ctgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| || | ||||||||  ||||| |||||| || ||||||||||||||    
T  22025271 ctgacttgagaattctgtcaaactaaaattacctatttgaaacctttg-aacttaaaggactaacttgggaattctgtcaaactaaaag 22025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 19632212 - 19632306
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| ||||| ||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| | ||| ||||||||||||||||||| ||||    
T  19632212 gggtaacagtgaagtagtttatcaactaaaatgacatatttaaaacttttgaaacttaaa-gactaatttgagaattctgtcaaactaaaaggacc 19632306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 36890533 - 36890450
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactga-cttgggaattctgtcaaactaaaa-tgacctaattgaaactttcgaaactta 139  Q
    |||||||||| ||||||||||||| |||| | ||| ||||||||||||||| |||| ||| ||||||||||||||| |||||||    
T  36890533 tatttgaaacttttgaaacttaaaagactaaacttcggaattctgtcaaaccaaaaatgatctaattgaaactttcaaaactta 36890450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 42116050 - 42116129
Alignment:
Q  39 gtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||| |||| ||||   |||| ||||||||||||||||||    
T  42116050 gtttatcaattaaaaagacctatttaaaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgacc 42116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 36890583 - 36890502
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaa-tgacctaattgaaactttcgaaacttaaaatactaaa 149  Q
    ||||||||||||| |||| |||||| |||| ||||||| ||||| |||| || |||||||||| ||||||||||| ||||||    
T  36890583 tttgaaacttaaaggactaacttggaaattatgtcaaattaaaaatgacttatttgaaacttttgaaacttaaaagactaaa 36890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 36890618 - 36890703
Alignment:
Q  28 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||||||||||||||| ||||| ||||||||  |||| ||| |||||||||||| | ||||   ||||||||||||||||||    
T  36890618 acggtgaaatagtttatcaactaaaatgacctattataaacttttaaaacttaaatgattaacttaaaaattctgtcaaactaaaa 36890703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 52866068 - 52865955
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| ||||   ||| | ||| |||||||||||||  || ||||| |||||||| |||||||||  ||||| ||| || || ||||||||    
T  52866068 atttgaaacttaaaggactagattgagcattttgtcaaactaaaagaacataatttaaactttcaaaacttaaaggactaacttgagaattctgtcaaac 52865969  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  52865968 taaaaggacaaaaa 52865955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 52866367 - 52866410
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  52866367 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 52866410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 30543095 - 30543133
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa 53  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  30543095 gacaacaggggtaacggtgaaatagtttatcaattaaaa 30543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 2508323 - 2508270
Alignment:
Q  59 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||| |||||| |||||| |||| |||||| ||||||||||||||||||    
T  2508323 atttgaaacttttgaagcttaaaggactaacttggaaattctgtcaaactaaaa 2508270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 5387584 - 5387677
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||||||||||||| |||||||| | |||| || |||||||||| ||| ||| ||||| | || ||||  ||||| |||||||||||||    
T  5387584 caggggtaacggtgaaataatttatcaagtgaaagtacatatttgaaacttttaaaatttaaaggtcttacttaagaattttgtcaaactaaaa 5387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 52181847 - 52181779
Alignment:
Q  108 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||| |  |||||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  52181847 taaaatgacatgtttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 52181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 35023955 - 35024050
Alignment:
Q  32 tgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||| ||||| || | |||  |||| ||| ||||||||| |||| ||||| ||||| ||| ||||||||| ||| |||||||||    
T  35023955 tgaaatagtttatcaactaaaaggatcaattaaaaacttttaaaacttaaaagactaacttgagaattgtgtaaaactaaaaagacataattgaaa 35024050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 52567818 - 52567747
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||| ||  || || |||||||||||||||||    
T  52567818 aactaaaatgacctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaaggac 52567747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 8408477 - 8408407
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||||||| || ||||||||||  |||||||||| ||| | ||| || || ||||||||||||||||    
T  8408477 aactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaagga 8408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 44915999 - 44915937
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaa 81  Q
    |||||||||| |||||||| |||||||| ||||| ||||| ||| |||| |||||||||||||    
T  44915999 caggggtaacagtgaaataatttatcaactaaaaagacctttttaaaacttttgaaacttaaa 44915937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 9320142 - 9320077
Alignment:
Q  108 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||||| ||| |||||||||| |||| |||||  ||||||||| || || ||||||||||||||    
T  9320142 taaaatgatctatttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaag 9320077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 19631916 - 19631871
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaac 67  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||    
T  19631916 gggtaacggtaaaatagtttatcaactaaaatgacctatttgaaac 19631871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 19632235 - 19632310
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||| || || ||||||| ||||||| ||| ||||| ||| || || ||||||||||||||||| ||||    
T  19632235 aactaaaatgacatatttaaaacttttgaaactt-aaagactaatttgagaattctgtcaaactaaaaggaccaaaa 19632310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 35023821 - 35023745
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||| ||||||||||||||  |||| ||||| ||||| ||   | || | ||||||||||||||||||||    
T  35023821 aactaaaatgatctaattgaaacttttaaaacgtaaaagactaatttaataattctttcaaactaaaaggactaaaa 35023745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 35046555 - 35046603
Alignment:
Q  124 aaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||||| ||||||||||  ||||| |||||| ||||||||||||||||    
T  35046555 aaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaa 35046603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 9276960 - 9277109
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||| |||||| ||||||||||| || ||||||    
T  9276960 gggtaacggtgaaatagtttatcaactaaaagacctatttgaaacttttgaaacttaaaggactaacttggaaattctatcaaactaaaaggatctaatt 9277059  T
Q  123 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    |||||||||||||||||||| ||||| |||||| || |||||||||||||    
T  9277060 gaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaa 9277109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 181
Target Start/End: Original strand, 9770768 - 9770920
Alignment:
Q  30 ggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  9770768 ggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaaattaaaggactaacttgggaattctgtcaaactaaaatgacttaattgaaact 9770867  T
Q  129 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  9770868 ttcgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 9770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 30576632 - 30576788
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  30576632 caggggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacct 30576731  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||||||| |||||||| || ||||| |||  | || ||||||||||||||||    
T  30576732 aattgaaacttttgaaacttagaagactaacttgaaaattctgtcaaactaaaagga 30576788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 36360053 - 36359904
Alignment:
Q  28 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    ||||| |||||||||||||| ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||  ||||||||||||    
T  36360053 acggtaaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaaatacctaattgaaa 36359954  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||||||||  ||||| |||| | || |||||||||||||||||    
T  36359953 ctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 36359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 45017899 - 45017745
Alignment:
Q  28 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||||||||| ||| |||||||||  |||||| |||||| |||| | ||||||||||||| ||||||||||||| |||||||||    
T  45017899 acggtgaaatagtttatcaattaaaatgacttatttgaaatttttgaatcttaaaggactaatttgggaattctgttaaactaaaatgacataattgaaa 45017800  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||  ||||| |||||| || | ||||||||||||||| ||||    
T  45017799 ctttcgaaacttaaaggactaacttgggaattctatcaaactaaaaggaccaaaa 45017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 23553520 - 23553359
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||| |||  ||||| ||||| |||||||||||||     
T  23553520 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaag 23553421  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||||||||||||||||||||||||||||  |  || ||| || || ||||||||||||||||    
T  23553420 gacctaattgaaactttcgaaacttaaaggatcaagttgagaattctgtcaaactaaaagga 23553359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 9276639 - 9276462
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||| || |||||||||    
T  9276639 ggtaacagtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaacttaactgactaacttgagaattctgtcaaactataaagacctaatt 9276540  T
Q  123 gaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaaa 198  Q
    ||||||||| ||||||||||  ||||  ||| || || ||||||||||||||||| |||| |||| |||| |||||||    
T  9276539 gaaactttcaaaacttaaaagaactattttgagaattttgtcaaactaaaaggaccaaaagtgatatttggcctaaaa 9276462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 39701365 - 39701522
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||| ||||||||||| |||||| ||||||||||||  |||||||||||||||||| |  |||||||||| ||||||||||| ||| |    
T  39701365 caggggtaacagtgaagtagtttatcaactaaaaggacctatttgaaagttttgaaacttaaatgactaatctgggaattctatcaaactaaaaggactt 39701464  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||||| ||||||||||  ||||| ||| || || |||||||||||||||||    
T  39701465 aattgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggac 39701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 44041249 - 44041422
Alignment:
Q  9 gagatggacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac 107  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||||| ||| |||||||||  |||||||||| || |||| |||| |||||||||||||||    
T  44041249 gagattgacatcatgggtaatggtgaaatagtttatcaactaaaatgacttatttgaaatttttgaaactttaaagactaacttaggaattctgtcaaac 44041348  T
Q  108 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||| ||| |||||||||||||| |||||||||  ||||| |||  | || ||||||||||||||||| ||||    
T  44041349 taaaaggacataattgaaactttcaaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacaaaaa 44041422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 39701050 - 39700888
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | |||| |||||| |||||||||||||     
T  39701050 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaag 39700951  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||| |||||||||||||  |||||||||  ||||| ||  || || |||||||||||||||||    
T  39700950 gacataattgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggac 39700888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 25730095 - 25730252
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||||||||||||||| ||||| ||| |||||||||| ||||||| ||||| |||| ||||| ||||||||||||| |||||||||||    
T  25730095 caggggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacct 25730194  T
Q  119 aa-ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    || ||||||||||| |||||||||  ||||| |||| | || | ||||||||||||||    
T  25730195 aatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaagga 25730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 16197194 - 16197027
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||| |||| ||||||||| ||||| || |||||| |||||||||| || |||||||||||||||| | |||||||||||||||||||||||||     
T  16197194 gacaacaggcgtaatggtgaaataatttattaactaaaaggacctatttgatacttttgaaacttaaatgattaacttgggaattctgtcaaactaaaag 16197095  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||| |||||||||||||||||||||||   ||||| |||  | || |||||||| |||||||| ||||    
T  16197094 gacataattgaaactttcgaaacttaatggactaacttgataattctgtcaaacgaaaaggaccaaaa 16197027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 29794238 - 29794392
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    ||||||||||| |||||||| |||||| | ||||||||||| ||||||||||||| |||| |||||| |||| ||||||||||||| ||||||||  |||    
T  29794238 acggtgaaataatttatcaactaaaaggatctatttgaaacttttgaaacttaaaagactaacttggaaattatgtcaaactaaaaggacctaatgaaaa 29794337  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||| |||||  ||||| |||||| || ||||||||||||| ||| ||||    
T  29794338 ctttcgaaatttaaaggactaacttgggaattctgtcaaactaaaatgaccaaaa 29794392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 8714003 - 8713844
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||||||||||||| | |||||||| ||||| || ||||||||||  ||||||||||||| |||| ||||| ||||| |||||||||||||  |  ||||    
T  8714003 gggtaacggtgaaacaatttatcaactaaaatgatctatttgaaatttttgaaacttaaaagactaacttgtgaattttgtcaaactaaaagaatttaat 8713904  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||| ||||||||||  ||||| ||| || |||||||||||||||||||| ||||    
T  8713903 tgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaa 8713844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 25737269 - 25737107
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||| |||||| |||||||||||||||| ||||| ||| ||| |||||| ||||||| ||||| |||| |||| ||||||| ||||||||||||     
T  25737269 gacagcaggtgtaacgatgaaatagtttatcaagtaaaatgacatatgtgaaacttttgaaatttaaaggactaacttaggaattcggtcaaactaaaag 25737170  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    || ||| |||||||||| ||||||||||  ||||| |||  | ||||||||||||||||||||    
T  25737169 gatctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 25737107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 25737581 - 25737736
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||||||||||||||| ||||| ||  |||||||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  25737581 caggggtaacagtgaaatagtttatcaactaaaatgaaatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacct 25737680  T
Q  119 aa-ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    || ||||||||||| |||||||||  ||||| |||| | || | ||||||||||||    
T  25737681 aatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaag 25737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 30576301 - 30576150
Alignment:
Q  31 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||||||||||| ||||| |||| ||||||||| ||| ||||||||| |||| |||||| ||||||| |||||||||| ||| ||||||||||||    
T  30576301 gtgaaatagtttatcaactaaaaagaccaatttgaaacttttcaaacttaaaagactaacttggaaattctggcaaactaaaaggacttaattgaaactt 30576202  T
Q  130 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    || ||| |||||  ||||| |||||| || |||||| |||||| ||| ||||    
T  30576201 tcaaaatttaaaggactaacttgggaattctgtcaagctaaaaagaccaaaa 30576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 40553260 - 40553368
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| || | | || ||||||||    
T  40553260 atttgaaacttaaatgattaacttgagaattctgtcaaactaaaaggaccaaattgaaacttttgaaacttaaaagactaacttagaaattttgtcaaac 40553359  T
Q  168 taaaaggac 176  Q
    |||||||||    
T  40553360 taaaaggac 40553368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 11113662 - 11113555
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||| ||| |||||  ||||| || ||| |||||||||||    
T  11113662 atttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctgattgaaactttcaaaatttaaaggactaacttaggaattatgtcaaac 11113563  T
Q  168 taaaagga 175  Q
    ||||||||    
T  11113562 taaaagga 11113555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 43422983 - 43422864
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| ||  ||| ||||| |||||||||||||||||| |||||||||  ||||| |||     
T  43422983 gacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaataaaaggacctaattgaaactttcaaaacttaaaggactaatttga 43422884  T
Q  154 gagttatgtcaaactaaaag 173  Q
    || |||| ||||||||||||    
T  43422883 gaattatatcaaactaaaag 43422864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 43423100 - 43423226
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||||||||||||| || | | ||| ||||||| | ||||||||| ||| ||||||||||||||||||||||||  ||||| || |    
T  43423100 gacctatttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaa-gacttaattgaaactttcgaaacttaaataactaacttag 43423198  T
Q  154 gagttatgtcaaactaaaaggactaaaa 181  Q
    || |||||||||||||||||||| ||||    
T  43423199 gaattatgtcaaactaaaaggaccaaaa 43423226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 31169452 - 31169609
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    ||||||| |||||||||||||||| |||||||| ||||| ||| |||||||||| ||| ||||||||| |||| | ||| |||||  |||||||||||||    
T  31169452 gacatcacgggtaacggtgaaatattttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttgagaatttcgtcaaactaaaat 31169551  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    || ||| ||||||||||  |||||||||  ||||| ||| || || |||||||||||||    
T  31169552 gatctatttgaaacttt-aaaacttaaaggactaacttgagaattttgtcaaactaaaa 31169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 36360088 - 36360210
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||||||||||||| |||| |||||| |||| ||||||| ||||| ||| || |||||||||||||||||||||| ||||| |||| | ||     
T  36360088 tttgaaacttttgaaacttaaaggactaacttggcaattttgtcaaattaaaaagacttatttgaaactttcgaaacttaaaagactaacttggaaattc 36360187  T
Q  160 tgtcaaactaaaaggactaaaat 182  Q
    ||||||||||||| ||| |||||    
T  36360188 tgtcaaactaaaatgaccaaaat 36360210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 9770672 - 9770565
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||  | ||| |||||| || |||||| |    
T  9770672 atttgaaacttaaatgactaacttgagaattctctcaaactaaaaggacttaattgaaactttcgaaacttaaatgattaacttgggaattctgtcaatc 9770573  T
Q  168 taaaagga 175  Q
    || |||||    
T  9770572 tacaagga 9770565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 13771843 - 13771937
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| ||||||||| ||||| ||| |||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  13771843 ggtaacagtgaaatggtttatcaaataaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgacc 13771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 23553840 - 23553994
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| |||||||| ||||| || ||| | || ||||||||||| |||||||||| |   ||| ||||| ||||||| ||||||||||||||| |    
T  23553840 caggggtaacagtgaaataatttattaactaacatgatctatttgaaacttttgaaacttgaggaactaacttgagaattctatcaaactaaaatgactt 23553939  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||| |||| |||||||||||||| ||||| ||  || || ||||||||||||||    
T  23553940 aattaaaacattcgaaacttaaaagactaactttagaattctgtcaaactaaaag 23553994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 8714330 - 8714482
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||| ||||||||||||||||| ||||| ||||||||| |||| || ||||||||||  ||| ||||| ||||||| |||||||||||  | ||| ||    
T  8714330 ggtaacagtgaaatagtttatcaactaaaaagacctatttaaaactttagaaacttaaaaaactaacttgcgaattctatcaaactaaaagaatctattt 8714429  T
Q  123 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||| ||| ||||||  ||||| |||| | || | ||||||||||||||    
T  8714430 gaaacttttgaatcttaaaggactaacttggaaattctatcaaactaaaagga 8714482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 40553313 - 40553433
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttat 160  Q
    ||||||| ||||||||||||| |||| |||| | |||| ||||||||||||| ||||| |||||||||||  ||||| |||  ||||| || ||| ||||    
T  40553313 ttgaaacttttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacctgattgaaactttttaaactcaaaggactaagttaggaattat 40553412  T
Q  161 gtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||| ||||    
T  40553413 gtcaaactaaaaggaccaaaa 40553433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 41190293 - 41190397
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||||||||   ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||  ||||| ||| || || |||||||||    
T  41190293 tttgaaacttaaatgactagattgagaattctatcaaactaaaatgacctaattgaaattttcgaaatttaaagaactaatttgagaattctgtcaaact 41190392  T
Q  169 aaaag 173  Q
    |||||    
T  41190393 aaaag 41190397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 4613900 - 4613778
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||| || |||||||||||||||| || |||||||  ||||||||||| ||||||||||||| |||| ||| |  |||| ||||||||||||| ||| |    
T  4613900 cagggttagcggtgaaatagtttataaactaaaagaatctatttgaaacttttgaaacttaaaggactaactcgaaaattttgtcaaactaaaaggactt 4613801  T
Q  119 aattgaaactttcgaaacttaaa 141  Q
    ||||||||||||| ||| |||||    
T  4613800 aattgaaactttcaaaatttaaa 4613778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 14871368 - 14871482
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaa-ctaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaa 166  Q
    |||||||||||||| |||| | ||| ||||| ||||||| ||||||  |||||||||||||||||||||||||||| ||||| || ||| || |||||||    
T  14871368 atttgaaacttaaaggactaatttgagaattatgtcaaaactaaaagaacctaattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaa 14871467  T
Q  167 ctaaaaggactaaaa 181  Q
    || ||||||| ||||    
T  14871468 cttaaaggaccaaaa 14871482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 40552922 - 40552800
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| |||||||| |||||||||| ||||| |||||||||||  ||||||| ||||||| || |||||  |||| ||||||||||||||  | |    
T  40552922 caggggtaacagtgaaatattttatcaatttaaagaacctatttgaaatttttgaaatttaaatggctaacttgaaaattttgtcaaactaaaatatctt 40552823  T
Q  119 aattgaaactttcgaaacttaaa 141  Q
    ||||||||||||| ||| |||||    
T  40552822 aattgaaactttcaaaatttaaa 40552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 13771518 - 13771425
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| || |||||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||| |||||  ||||||||||||||||||    
T  13771518 caggggaaatggtgaaatagtttatcaactaaaagaatctatttgaaacttttaaaacttaaatgactaacttgaaaattctgtcaaactaaaa 13771425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 29792559 - 29792652
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||| ||||| ||||||||||||| || ||||| ||||||||||||| |||||  ||||| |||||| || ||||||||||||||||||||||    
T  29792559 acttgagaattatgtcaaactaaaaggatctaatagaaactttcgaaatttaaaggactaatttgggaattctgtcaaactaaaaggactaaaa 29792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 5358754 - 5358650
Alignment:
Q  9 gagatggacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac 107  Q
    ||||| |||| |||||||||| | ||||||||||||||| |||||| |||||||| |||| |||||||||| || |||| |||||  |||||||||||||    
T  5358754 gagattgacagcaggggtaacagcgaaatagtttatcaactaaaaggacctatttaaaacttttgaaacttgaaggactaacttgaaaattctgtcaaac 5358655  T
Q  108 taaaa 112  Q
    |||||    
T  5358654 taaaa 5358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 6236250 - 6236358
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||||||  ||| ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||  | ||| |||||| || ||| ||||    
T  6236250 atttgaaacttaaagtactaacttgggaagtctgtcaaattaaaaggacctaattgaaactattgaaacttaaagaaataacttgggaattttgtaaaac 6236349  T
Q  168 taaaaggac 176  Q
    |||||||||    
T  6236350 taaaaggac 6236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 39700943 - 39700856
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaa 148  Q
    ||||||| ||| ||||||||| |||| ||||  ||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  39700943 ttgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggacctaattgaaactttcaaaacttaaaagactaa 39700856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 43423028 - 43422921
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||| ||||| |||| |||||| |||| |||||||||||||||||||| |||||||||| ||||||||||  ||||| |||||| || ||  ||| |    
T  43423028 tttgaaatttaaaggactaacttggaaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaat 43422929  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  43422928 aaaaggac 43422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 45017934 - 45018053
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||  ||||||||||||| |||| |||||| | ||  |||||||||||| ||||||||| ||||||||||||||||||  ||||| |||    ||     
T  45017934 tttgaaatttttgaaacttaaaggactaacttggaactt--gtcaaactaaaaggacctaattaaaactttcgaaacttaaaggactaacttgaagattt 45018031  T
Q  160 tgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||||||||    
T  45018032 tgtcaaactaaaaggactaaaa 45018053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 36314697 - 36314781
Alignment:
Q  97 ttctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||| ||||| |||  | || ||||||||||||||||| ||||    
T  36314697 ttctgtcaaactaaaaggacataattgaaactttcgaaatttaaaagactaacttgataattttgtcaaactaaaaggaccaaaa 36314781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 35433994 - 35433899
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| |||||||| |||||||| ||||| || |||||| |||| |||||||||||||||||| ||||| ||||||| ||||| ||||| ||||    
T  35433994 gggtaacagtgaaataatttatcaactaaaaagatctatttaaaacttttgaaacttaaatgactaacttgtgaattctatcaaattaaaaggacc 35433899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 35434313 - 35434400
Alignment:
Q  31 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | |||| |||||| ||||||||||||| ||||    
T  35434313 gtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggacc 35434400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 36360138 - 36360205
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| |||||||||| || |||||||||| |||| |||||| |||||||||||||||||||||||    
T  36360138 aaaagacttatttgaaactttcgaaacttaaaagactaacttggaaattctgtcaaactaaaatgacc 36360205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 9770731 - 9770662
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    |||||||  ||||||||||||| |||| |||| |||||||||||||||||||| |||||| |||||||||    
T  9770731 tttgaaatttttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggacctatttgaaactt 9770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 16208674 - 16208815
Alignment:
Q  32 tgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaacttt 130  Q
    |||||||||||||||| |||||| || |||||||||| ||||||||| ||| |||| |||||  |||||| | |||||||||||| ||| ||||||  |     
T  16208674 tgaaatagtttatcaactaaaaggacatatttgaaacttttgaaactcaaaggactaacttgaaaattctataaaactaaaatgatctatttgaaatcta 16208773  T
Q  131 cgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
      |||||||||  ||||| ||| || || |||||||||||||    
T  16208774 taaaacttaaagaactaacttgagaattctgtcaaactaaaa 16208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 34686875 - 34686968
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||| ||||| |||| |||||  |||||||||||| ||||| ||||    
T  34686875 gtaacggtgaaatagtttatcaactaaaaggacctatttaaaacttttaaaatttaaaggactaacttgataattctgtcaaattaaaaggacc 34686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 43423074 - 43423127
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  43423074 acttgggaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaa 43423127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 6235895 - 6235793
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttg-ggaattctgtcaaactaaaa 112  Q
    |||| ||| ||||| |||||||||||||||||| ||||| |  ||||||||||| ||||||| ||||| || | ||||  ||||||||||||||||||||    
T  6235895 gacagcagaggtaaaggtgaaatagtttatcaactaaaatagtctatttgaaacttttgaaatttaaaggattaactttcggaattctgtcaaactaaaa 6235796  T
Q  113 tga 115  Q
    |||    
T  6235795 tga 6235793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 9277058 - 9277112
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatga 115  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||||||||||||    
T  9277058 ttgaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaatga 9277112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 13771868 - 13771941
Alignment:
Q  108 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||| || |||||||||| ||||||||||  ||||| |||||| |||||||||||||||| ||| ||||    
T  13771868 taaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgaccaaaa 13771941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 35434328 - 35434404
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||| || |||||||||| ||||||||||  | ||| || ||| |||||||||||||||||||| ||||    
T  35434328 aactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggaccaaaa 35434404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 23179096 - 23179049
Alignment:
Q  70 ttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  23179096 ttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 23179049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 23553489 - 23553418
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||| |||||||||| |||| |||||| || || ||| || || |||||||||||||||||    
T  23553489 aactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaaggac 23553418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 30576658 - 30576729
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||||| || || ||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  30576658 aactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 30576729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 36359970 - 36359903
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||| ||||| ||||||| || |||||||||| |||| |||||| |||||||||||||||||| ||||    
T  36359970 aaaatacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 36359903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 44040922 - 44040860
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaa 81  Q
    ||||| |||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||    
T  44040922 cagggataacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaa 44040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 29030175 - 29030252
Alignment:
Q  104 aaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||| ||| ||||||||||||||||||||||||  | ||| |  ||| |||||||||||||||| ||| ||||    
T  29030175 aaactaaaaggacttaattgaaactttcgaaacttaaaggaataactaaggaattatgtcaaactaaaatgaccaaaa 29030252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 44040896 - 44040808
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacct 194  Q
    ||||||||||||||| || ||||||| |||||||||||  |||| |||  | || ||| ||||||||||||| |||||||| ||||||||    
T  44040896 aactaaaatgacctatttaaaacttttgaaacttaaaa-gctaatttgtaaattctgttaaactaaaaggaccaaaatgatatttgacct 44040808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 25737166 - 25737106
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||| ||||||||||||| |||| |||||  |||| ||||||||||||| ||||    
T  25737166 ctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacc 25737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 31169555 - 31169614
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||| ||| ||||||||| |||| ||||| ||||| ||||||||||||||||||    
T  31169555 ctatttgaaac-tttaaaacttaaaggactaacttgagaattttgtcaaactaaaatgacc 31169614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 39701467 - 39701523
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| |||||||||||||  ||| ||||| ||||||||||||||||||| ||||    
T  39701467 ttgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggacc 39701523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 43423154 - 43423222
Alignment:
Q  49 taaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||| || ||||||| || ||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  43423154 taaaagacttaattgaaactttcgaaacttaaataactaacttaggaattatgtcaaactaaaaggacc 43423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 14871416 - 14871478
Alignment:
Q  55 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||| ||||||| || |||||||||| |||| |||| |||||||||||||||| ||| ||||    
T  14871416 acctaattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaacttaaaggacc 14871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 9770619 - 9770575
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaa 105  Q
    ||||||| || ||||||||||||| | ||||||||||||||||||    
T  9770619 ttgaaactttcgaaacttaaatgattaacttgggaattctgtcaa 9770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 39701391 - 39701463
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 177  Q
    |||||||| |||||| |||||| ||| ||||||||||  |||||  ||||| || | ||||||||||||||||    
T  39701391 aactaaaaggacctatttgaaagttttgaaacttaaatgactaatctgggaattctatcaaactaaaaggact 39701463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 36196462 - 36196627
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||     
T  36196462 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaactaaaaa 36196561  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||||||||||||||  ||||| |||  | |  ||||||||||||||||| ||||    
T  36196562 gacctaattgaaactttcgaaacttaaaggactaatttgaaaat--tgtcaaactaaaaggaccaaaa 36196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 27893519 - 27893686
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||| ||||| |||||||||||||||| ||||| || ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||     
T  27893519 gacaacagggttaacgatgaaatagtttatcaactaaaatgatctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaag 27893618  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
     ||||||||||||||| |||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  27893619 aacctaattgaaacttacgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 27893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 31264125 - 31264301
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||    
T  31264125 gggtgacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaataactaacttggaaattctgtcaaactaaaaggacttaat 31264224  T
Q  122 tgaaactttcgaaacttaaaatac--taaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgaccta 195  Q
    |||||||||||||||||||| |||  ||| |||| | || |||||||||||||||| | ||| |||| |||||||||    
T  31264225 tgaaactttcgaaacttaaagtactataacttggaaattctgtcaaactaaaaggatcaaaagtgatatttgaccta 31264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 19080784 - 19080667
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattg 123  Q
    ||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  19080784 gtaacggtgaaatagtttatcaactaaaaggacctatatgaaacttttgaaacttaaatgtctaacttgaaaattctgtcaaactaaaatgacctaattg 19080685  T
Q  124 aaactttcgaaacttaaa 141  Q
    |||||||| |||||||||    
T  19080684 aaactttcaaaacttaaa 19080667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 34336185 - 34336039
Alignment:
Q  30 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    ||||||||||||||| || ||||| ||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  34336185 ggtgaaatagtttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgacataattgaaact 34336086  T
Q  129 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||| |||||||||  ||||| |||  | || | ||||||||||||||    
T  34336085 ttcaaaacttaaaggactaatttgaaaattttatcaaactaaaagga 34336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 30907196 - 30907063
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    ||||||||||| ||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||     
T  30907196 ctatttgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacctaattgaaactttcgaaacttaaaagactaacttgagaa 30907097  T
Q  157 ttatgtcaaactaaaaggactaaaatgatttttg 190  Q
    || ||||||||||||||  | |||||||| ||||    
T  30907096 ttctgtcaaactaaaagaccaaaaatgatatttg 30907063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 31264049 - 31263923
Alignment:
Q  55 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggg 154  Q
    ||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  | ||| ||||     
T  31264049 acctatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggattaacttgga 31263950  T
Q  155 agttatgtcaaactaaaaggactaaaa 181  Q
    | || ||||||||||||| ||| ||||    
T  31263949 aattctgtcaaactaaaaagaccaaaa 31263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 176
Target Start/End: Complemental strand, 30907253 - 30907137
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||| |||||| || ||| |||||||||| ||||||||||  ||||| ||| || |||    
T  30907253 tttgaaacttttgaaacttaaatgactaacttgggaattatgtcaatctaaaaggatctatttgaaacttttgaaacttaaaggactaacttgagaatta 30907154  T
Q  160 tgtcaaactaaaaggac 176  Q
    |||||||||||||||||    
T  30907153 tgtcaaactaaaaggac 30907137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 30907288 - 30907440
Alignment:
Q  28 acggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac-taaaatgacctaattgaaa 126  Q
    |||| |||||| |||||||  |||| ||| |||||||||| ||||||||||||| |||| ||||| ||||||| |||||| ||||| |||||||||||||    
T  30907288 acggcgaaataatttatca--taaatgacttatttgaaacttttgaaacttaaaggactaacttgagaattctttcaaacttaaaaggacctaattgaaa 30907385  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||  ||||| ||   | || |||||||||||||||| |||||    
T  30907386 ctttcgaaacttaaatgactaacttataaattttgtcaaactaaaaggattaaaa 30907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 37543057 - 37542956
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||| || | |||| |||||||||    
T  37543057 tttgaaacttaaaggactaacttggaaattatgtcaaactaaaatgacttaattaaaactttcgaaacttaaaagactaactt-gaagttctgtcaaact 37542959  T
Q  169 aaa 171  Q
    |||    
T  37542958 aaa 37542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 39376401 - 39376491
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaa 140  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||  ||||| ||||||||  |||||||||||||||||    
T  39376401 aaaagacctatttgaaacgtttgaaacttaaaggactaacttggaaattctgtcaatttaaaaagacctaatcaaaactttcgaaacttaa 39376491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 11871714 - 11871835
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||||||||||| ||||| |||||||| ||||| ||| ||||| |||| ||||||||||||| |||| ||| | ||||||||||||||||| | ||| |    
T  11871714 caggggtaacggttaaataatttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaactcgagaattctgtcaaactaagaggacat 11871813  T
Q  119 aattgaaactttcgaaacttaa 140  Q
    |||||||| |||| ||||||||    
T  11871814 aattgaaagtttcaaaacttaa 11871835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 27893146 - 27893038
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| ||  |||||||||||||||||| |||||  | ||| ||| || || ||||||||    
T  27893146 atttgaaacttaaaggactaacttgggaatactgtcaaactaaaaagatataattgaaactttcgaaatttaaaggattaacttgagaattctgtcaaac 27893047  T
Q  168 taaaaggac 176  Q
    |||||||||    
T  27893046 taaaaggac 27893038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 8260507 - 8260392
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    ||||||||||| ||||||| ||||| || | | ||| ||| |||||||||||||||||| |||||||||||||||||||||||||  ||||| ||| ||     
T  8260507 ctatttgaaacttttgaaaattaaaagagtaatttgagaactctgtcaaactaaaatgatctaattgaaactttcgaaacttaaaggactaatttgagaa 8260408  T
Q  157 ttatgtcaaactaaaa 172  Q
    || ||| |||||||||    
T  8260407 ttctgtaaaactaaaa 8260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 20535608 - 20535509
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaac-ttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||  |||| ||| |||||||||    
T  20535608 gacagcagggataacggtgaaatagtttatcaactaaaatgacctatttgaaacatttgaaactttaaatgactaacttgataattatgttaaactaaaa 20535509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 34336276 - 34336419
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| ||||||| |||||  ||| | ||| ||||| ||||||| ||||| ||| ||| |||||||||||||| |||||  ||||| ||| || |    
T  34336276 tatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaattaaaaggacttaactgaaactttcgaaatttaaaggactaatttgagaat 34336375  T
Q  158 tatgtcaaactaaaaggactaaaa-tgatttttgacctaaaata 200  Q
    | ||||||||||||||||| |||| |||| ||||||||||||||    
T  34336376 tctgtcaaactaaaaggaccaaaagtgatatttgacctaaaata 34336419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 16781049 - 16781175
Alignment:
Q  56 cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaa-tactaaattggg 154  Q
    |||| ||||||| ||||||| ||||| |||| ||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||||||  ||||| ||| |    
T  16781049 cctaattgaaacttttgaaatttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattaaaactttcaaaacttaaaaggactaacttgag 16781148  T
Q  155 agttatgtcaaactaaaaggactaaaa 181  Q
    | || ||||||||||||| ||| ||||    
T  16781149 aattctgtcaaactaaaatgaccaaaa 16781175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 15506145 - 15506040
Alignment:
Q  21 aggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 119  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| |||| ||| ||||||||| || | | ||| ||||| ||||||||||||| ||||||    
T  15506145 agggttaacggtgaaatagtttatcaattaaaatgacctctttaaaactttttaaacttaaaggattaatttgagaattatgtcaaactaaaaggaccta 15506046  T
Q  120 attgaa 125  Q
    ||||||    
T  15506045 attgaa 15506040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 31264095 - 31263988
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    |||||||||||||  ||| |||||||||||||||||||  ||||  ||||| |||||||||| ||||||||||  ||||| ||| || || |||||||||    
T  31264095 tttgaaacttaaagtactaacttgggaattctgtcaaagaaaaagaacctatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaact 31263996  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  31263995 aaaaggac 31263988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 34429791 - 34429684
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| || | |||||| |||||| ||||| ||||| ||||||||||||| |||||||| |||||  ||||| ||| || || |||||||||    
T  34429791 tttgaaacttaaaggattaacttggaaattctttcaaattaaaaggacctaattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaact 34429692  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  34429691 aaaaggac 34429684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 41265257 - 41265364
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||  ||||| |||  | || | ||||||    
T  41265257 atttgaaacttaaaggactaacttgagaattctgtcaaattaagaggacataattgaaactttcgaaacttaaatgactaacttgataattctctcaaac 41265356  T
Q  168 taaaagga 175  Q
    ||||||||    
T  41265357 taaaagga 41265364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 42117172 - 42117268
Alignment:
Q  22 ggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||||||| ||||||||| |||||| |||||||| |||| ||||||||||||| |||| |||| | | ||||| |||||||||| ||||    
T  42117172 ggggtaacggtgaaattgtttatcaactaaaaggacctatttaaaacttttgaaacttaaaggactaacttagaatttctgacaaactaaaaggacc 42117268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 19081055 - 19081124
Alignment:
Q  103 caaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||| ||| || || |||||||||||||    
T  19081055 caaactaaaaacacctaattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 20535966 - 20536039
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||||||||| |||| ||||| ||||| ||||||||||||||||  ||||| ||||||||| ||||||||    
T  20535966 atttgaaacttaaaagactaacttgagaattatgtcaaactaaaatgatataattaaaactttcgtaacttaaa 20536039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 37543100 - 37543197
Alignment:
Q  76 cttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||| ||||  ||||| |||| ||||||||||||| ||| |||||||||||||| |||||||||| ||||| |||  | || ||||||||||||||    
T  37543100 cttaaaggactaccttggaaattatgtcaaactaaaaggacttaattgaaactttcaaaacttaaaagactaacttgaaaattctgtcaaactaaaag 37543197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 34336227 - 34336335
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| || | |||||  ||||||||||||||| || ||| || |||||||||| |||| |||||  ||||| ||| || || ||||||| |    
T  34336227 tttgaaacttaaaagattaacttgaaaattctgtcaaactacaaggacttatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaatt 34336326  T
Q  169 aaaaggact 177  Q
    |||||||||    
T  34336327 aaaaggact 34336335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 30907139 - 30907081
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| ||||||| || |||||||||| |||| ||||| |||||||||||||||||||    
T  30907139 gacctaattgaaactttcgaaacttaaaagactaacttgagaattctgtcaaactaaaa 30907081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 37543089 - 37543048
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  37543089 acttgggaattctgtcaaactaaaatgacctgtttgaaactt 37543048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 31263990 - 31263927
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| || |||||||||| || | |||||| |||||||||||||||||| ||||    
T  31263990 gacctaattgaaactttcgaaacttaaaggattaacttggaaattctgtcaaactaaaaagacc 31263927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 19081062 - 19081124
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| ||||| ||||||| || |||||||||| |||| | ||| |||||||||||||||||||    
T  19081062 aaaacacctaattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 5116956 - 5116895
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    |||||||||||||| |||| | ||   |||| ||||||||||||| ||||||||||||||||    
T  5116956 atttgaaacttaaaggactaatttaaaaattttgtcaaactaaaaggacctaattgaaactt 5116895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 27893191 - 27893138
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaac 67  Q
    |||| ||| ||||||| |||||||||||||||| | ||||||||||||||||||    
T  27893191 gacagcagaggtaacgttgaaatagtttatcaactaaaaagacctatttgaaac 27893138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 39376284 - 39376172
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||| ||||| |||| |||| ||||||| || ||||||||| || ||| ||||||||||| |||||| ||  || || ||| || |||||| ||||    
T  39376284 atttgaaatttaaa-gactaacttaggaattccgtaaaactaaaaggatctagttgaaactttcaaaacttgaaggaccaacttgagaattatgttaaac 39376186  T
Q  168 taaaaggactaaaa 181  Q
    ||||| ||| ||||    
T  39376185 taaaatgacaaaaa 39376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 5117006 - 5116946
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||| ||||| || | ||||| ||||| ||||||||||||||||| || |||||||||    
T  5117006 tttgaaagttaaaggagtaacttgtgaattttgtcaaactaaaatgacttatttgaaactt 5116946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 34429755 - 34429683
Alignment:
Q  46 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| ||||| ||||||  || |||| ||||| |||| ||||| ||||||||||||||||||| ||||    
T  34429755 aattaaaaggacctaattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 34429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 10862545 - 10862708
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaa-tgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| ||||| ||| ||||||||| |||||||||||    
T  10862545 gacagcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaatttaaaatgactaactggggaattctttcaaactaaaa 10862644  T
Q  113 tgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||| |||||||||||||| |||||||||  ||||| ||| || || |||||||||||||||||    
T  10862645 tgacttaattgaaactttcaaaacttaaaggactaacttgagaattctgtcaaactaaaaggac 10862708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 32417684 - 32417829
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| |||||| ||||||||||||| | |||||||||||||||| |||| | |||| ||||||||| ||| |||||||||||||    
T  32417684 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaa 32417783  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||||||| |||||  ||||| |||||| || ||| |||||||||    
T  32417784 ctttcgaaagttaaagaactaacttgggaattctgtaaaactaaaa 32417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 32423525 - 32423670
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| |||||| ||||||||||||| | |||||||||||||||| |||| | |||| ||||||||| ||| |||||||||||||    
T  32423525 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaa 32423624  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||||||| |||||  ||||| |||||| || ||| |||||||||    
T  32423625 ctttcgaaagttaaagaactaacttgggaattctgtaaaactaaaa 32423670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 11527693 - 11527535
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||         ||||| |||| ||||| ||||| |||||||||||||     
T  11527693 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaac---------ttaaaggactaacttgtgaattttgtcaaactaaaag 11527603  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||||||||||||||  ||||| || ||| |||||||||| ||||||||| ||||    
T  11527602 gacctaattgaaactttcgaaacttaaaggactaacttaggaattatgtcaaagtaaaaggaccaaaa 11527535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 16168685 - 16168807
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaa 149  Q
    |||||||||||||||||| |||||||| |||  |||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||  |||||     
T  16168685 aaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaactaaaaggacctaattgaaacttgcgaaacttaaatgactaat 16168784  T
Q  150 ttgggagttatgtcaaactaaaa 172  Q
    |||| | || |||||||||||||    
T  16168785 ttggaaattctgtcaaactaaaa 16168807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 17180102 - 17180224
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||||||||| |||| |||||  |||| ||||||||||||| ||| |    
T  17180102 caggggtaacggtgaaatagtttatcaactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacat 17180201  T
Q  119 aattgaaactttcgaaacttaaa 141  Q
    |||| ||||||||||||||||||    
T  17180202 aattaaaactttcgaaacttaaa 17180224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 176
Target Start/End: Complemental strand, 20575559 - 20575416
Alignment:
Q  34 aaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcg 132  Q
    |||||||||||||| | ||| |||||||||||||| ||| ||||||||| |||| |||||| |||||| ||||||||||| |||||| || |||||||||    
T  20575559 aaatagtttatcaactgaaatgacctatttgaaacttttaaaacttaaaggactaacttggaaattctatcaaactaaaaggacctatttaaaactttcg 20575460  T
Q  133 aaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||  ||||| |||| | || | |||||||||||||||    
T  20575459 aaacttaaaggactaacttggaaattctatcaaactaaaaggac 20575416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 16168577 - 16168464
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||  |||||  || || || | ||||||    
T  16168577 atttgaaacttaaaggactaacttggaaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaaggactaacgtgagaattctatcaaac 16168478  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  16168477 taaaaggaccaaaa 16168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 32417591 - 32417468
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    ||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||| |||  | |    
T  32417591 tatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaaggactaacttgaaaat 32417492  T
Q  158 tatgtcaaactaaaaggactaaaa 181  Q
    | ||||||||||||||||| ||||    
T  32417491 tctgtcaaactaaaaggaccaaaa 32417468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 32423432 - 32423309
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    ||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||| |||  | |    
T  32423432 tatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaaggactaacttgaaaat 32423333  T
Q  158 tatgtcaaactaaaaggactaaaa 181  Q
    | ||||||||||||||||| ||||    
T  32423332 tctgtcaaactaaaaggaccaaaa 32423309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 24139466 - 24139626
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||| || |||||||| |||||||| ||||| ||| |||||||||  ||||||||||||| |||| || ||  |||||| |||||||||||     
T  24139466 gacaacaggggttacagtgaaataatttatcaactaaaaagacttatttgaaatttttgaaacttaaaggactaacctgataattctatcaaactaaaag 24139565  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||| ||||| ||||||||||||||||||  ||||| ||| || ||||||| |||||||||||    
T  24139566 gacttaattaaaactttcgaaacttaaaggactaatttgtgaattatgtc-aactaaaagga 24139626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 9902277 - 9902404
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||||||  ||| ||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| ||||| |||  | || ||||||||    
T  9902277 atttgaaacttaaagaactaactcgggaattatgtcaaactaaaaggacataattaaaactttcgaaacttaaaagactaacttgaaaattctgtcaaac 9902376  T
Q  168 taaaagga-ctaaaatgatttttgacct 194  Q
    |||||| | | |||||||| ||||||||    
T  9902377 taaaagaaccaaaaatgatatttgacct 9902404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 16168644 - 16168751
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| |||||||| ||| |||||||||||| |||||| |||||||||| ||||| ||| | ||||| ||| || || |||||||||    
T  16168644 tttgaaacttaaaagactaacttgggatttcagtcaaactaaaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaact 16168743  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  16168744 aaaaggac 16168751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 10962896 - 10962746
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||| ||| ||||||||| |||| | || | |||||| | ||| ||||| || |||||    
T  10962896 gggtaacggtaaaatagtttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttagaaattctattaaaataaaaggatctaat 10962797  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||||||||||||||| | | | ||| || ||| || |||||||||||||    
T  10962796 tgaaactttcgaaactttacagaataactttggaattttgtcaaactaaaa 10962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 20575600 - 20575670
Alignment:
Q  59 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||    
T  20575600 atttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctatttgaaactt 20575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 2839737 - 2839624
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||| ||||| |||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||  ||||| ||| || || | |||||     
T  2839737 atttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttttgaaacttaaacgactaacttgagaattctttcaaat 2839638  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  2839637 taaaaggaccaaaa 2839624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 2840064 - 2840172
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||| || ||| | |||||||| ||||||||||  ||||| ||| || |||||| ||||    
T  2840064 atttgaaacttaaatgattaacttgagaattctgttaaactaaaaggatctattcgaaacttttgaaacttaaatgactaacttgagaattatgttaaac 2840163  T
Q  168 taaaaggac 176  Q
    |||||||||    
T  2840164 taaaaggac 2840172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 17179790 - 17179662
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||| |||||||||||||   ||||||| |||||| ||||||||||||  ||||||| ||||| |||| |||||  |||||| ||||||||||      
T  17179790 gacagcaggagtaacggtgaaatgacttatcaactaaaaggacctatttgaaatttttgaaatttaaaggactaacttgaaaattctatcaaactaaagg 17179691  T
Q  114 gacctaattgaaactttcgaaacttaaaa 142  Q
    ||||||||| ||| |||||||||||||||    
T  17179690 gacctaattaaaattttcgaaacttaaaa 17179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 9946672 - 9946818
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| |||||| |||| |||||||          ||||| |||| | |||| |||| ||||||||||||||    
T  9946672 gacagcaggggtaacggtgaaatagtttatcaactaaaaggacctctttgaaat---------ttaaaggactaatttggaaattatgtcaaactaaaat 9946762  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaacta 169  Q
    |||||||||||||||||||| | |||||  ||||| || | | |||||||||||||    
T  9946763 gacctaattgaaactttcgagatttaaaggactaacttagaaattatgtcaaacta 9946818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 28630584 - 28630742
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||||| |         |||||  ||| |||| ||||||||  |||||||||      
T  28630584 gacaacaggggtaaaggtgaaatagtttatcaactaaaaggacctatttgaagc---------ttaaagtactaacttaggaattctaccaaactaaatg 28630674  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |  ||||||||||||||| |||||||||| ||||| || ||| |||||||||||||||||||| ||||    
T  28630675 ggtctaattgaaactttcaaaacttaaaaaactaacttaggaattatgtcaaactaaaaggaccaaaa 28630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 9902060 - 9901962
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||| |||| ||||||||| |||  ||| |||||| ||||||| |||||||||| ||||    
T  9902060 caggggtaacgatgaaatagtttatcaactaaaatgacctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggacc 9901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 20575660 - 20575763
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||| ||| || || ||||||||||||||||||| ||||| ||| || || ||||||||    
T  20575660 atttgaaacttgaa-gactaacttgggaattttgtcaaactaaaaggacttatttaaaactttcgaaacttaaaa-actaacttgagaattctgtcaaac 20575757  T
Q  168 taaaag 173  Q
    ||||||    
T  20575758 taaaag 20575763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 11528013 - 11528130
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattg 123  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | | |||||| || |||||||||||||  |  || |||    
T  11528013 gtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaagttgggacttatgtcaaactaaaagaatatatttg 11528112  T
Q  124 aaactttcgaaacttaaa 141  Q
    |||||||  |||||||||    
T  11528113 aaactttttaaacttaaa 11528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 32417640 - 32417537
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||| || || ||||||| ||||||||||  ||||| |||  | || |||||||||    
T  32417640 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32417541  T
Q  169 aaaa 172  Q
    ||||    
T  32417540 aaaa 32417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 32423481 - 32423378
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||| || || ||||||| ||||||||||  ||||| |||  | || |||||||||    
T  32423481 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32423382  T
Q  169 aaaa 172  Q
    ||||    
T  32423381 aaaa 32423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 10407410 - 10407317
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||||| |||||||| |||||||| ||||| ||| |||||||||| |||||||||||||  | | || | |||||| |||||||||||||    
T  10407410 caggggtaacagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaa 10407317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 11528034 - 11528102
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||||||||| || |||||||||| ||||||||||  | ||| |||||| |||||||||||||||||    
T  11528034 aactaaaatgacatatttgaaacttttgaaacttaaaggattaagttgggacttatgtcaaactaaaag 11528102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 9902034 - 9901939
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaata 200  Q
    ||||||||||||||| || ||||||| |||||| |||  ||||| |||| | || || |||||||||||||| ||||| || |||| |||||||||    
T  9902034 aactaaaatgacctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggaccaaaattatatttggcctaaaata 9901939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 10407709 - 10407799
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacattt-gaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||| |||  |||||| ||||||| ||||| |||||| || |||||||||    
T  10407709 ggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttaaaaacttgaatgactaacttgagaattccgttaaactaaaa 10407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 10407384 - 10407307
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaat 182  Q
    |||||||||||| || |||||||||| ||||||||||  | |||  | ||| || |||||||||||||||||||||||    
T  10407384 aactaaaatgacatatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaaggactaaaat 10407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 2839700 - 2839628
Alignment:
Q  46 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||| ||||| ||||||| ||||| ||||| ||||    
T  2839700 aattaaaaggacctaattgaaacttttgaaacttaaacgactaacttgagaattctttcaaattaaaaggacc 2839628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 2840113 - 2840173
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||| ||||| |||||||||||||||||| ||||| ||||| ||| ||||||||| ||||    
T  2840113 ctattcgaaacttttgaaacttaaatgactaacttgagaattatgttaaactaaaaggacc 2840173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 17132178 - 17132265
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaa 106  Q
    |||| |||||||| ||||||||||| || ||| | ||| |||||||| | ||||||||||||| || | ||||| |||||||||||||    
T  17132178 caggagtaacggtaaaatagtttataaactaatatgacttatttgaatcttttgaaacttaaaggattaacttgagaattctgtcaaa 17132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 17180128 - 17180199
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||| ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  17180128 aactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 17180199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 20575478 - 20575415
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| |||| || |||||||||| |||| |||||| |||||| ||||||||||| ||||    
T  20575478 gacctatttaaaactttcgaaacttaaaggactaacttggaaattctatcaaactaaaaggacc 20575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 20575602 - 20575657
Alignment:
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  20575602 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 20575657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 10862665 - 10862709
Alignment:
Q  73 aaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  10862665 aaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 10862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 48352708 - 48352867
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||    
T  48352708 gggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaatagacctaat 48352807  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||| |||||||||||||||| ||||| | |||| || ||||||||||||||||| ||||    
T  48352808 tgaatctttcgaaacttaaaagactaactcgggaattctgtcaaactaaaaggaccaaaa 48352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 27351217 - 27351059
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| ||||||| || ||||||||||||| |||| ||||| ||||| |||||||||||||     
T  27351217 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaag 27351118  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||| ||||||||||||||||||||||||  ||||| ||| || || ||||||| |||||    
T  27351117 gacttaattgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaa 27351059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 29419051 - 29419189
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| ||||||||||||| |||| | || |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| |||| | |    
T  29419051 tatttgaaacttttgaaacttaaaagactaattttggaattctgtcaaactaaaaggacctaattgaaactttcgaaacttgaaagactaacttggaaat 29419150  T
Q  158 tatgtcaaactaaaaggactaaaa-tgatttttgaccta 195  Q
    ||||||||||||||||||| |||| |||| |||||||||    
T  29419151 tatgtcaaactaaaaggaccaaaagtgatatttgaccta 29419189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 10686680 - 10686839
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||| ||||| |||||||||  || ||||| |||||||     
T  10686680 gggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaatgactaacttgagaattctgttgaagtaaaaggacctaac 10686779  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    | ||||||||||||||||||  ||||| |||  | || ||||||||||||||||| ||||    
T  10686780 ttaaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaa 10686839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 8902927 - 8902803
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| |||||||| |||||||| |||||| || ||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  8902927 gacaacaggggtaacagtgaaataatttatcaactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaat 8902828  T
Q  114 gacctaattgaaactttcgaaactt 138  Q
    ||| |||||||||||||||||||||    
T  8902827 gacttaattgaaactttcgaaactt 8902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 34254665 - 34254504
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| ||||||||||||||| | |||||| |  |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||     
T  34254665 gacaacaggggtaacagtgaaatagtttatcgactaaaagcatatatttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaag 34254566  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    || ||| || ||||||| ||| ||||||  || || ||| || || ||||||||||||||||    
T  34254565 gatctatttaaaacttttgaaccttaaaggaccaacttgagaattctgtcaaactaaaagga 34254504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 44964072 - 44964192
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||| ||||||||| || | ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||     
T  44964072 gacctatttgaaacttttaaaacttaaaggaataacttgagaattctgtcaaactaaaatgatctaattgaaactttcgaaactt-aaagactaacttga 44964170  T
Q  154 gagttatgtcaaactaaaagga 175  Q
    || || |||| |||||||||||    
T  44964171 gaattttgtctaactaaaagga 44964192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 1765846 - 1765693
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| |||||| | |||||| |||| ||||||||||||| |||| | || | |||| ||||||||||| ||||||| ||| |||    
T  1765846 acggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaatttagaaattatgtcaaactaacatgacctgattaaaa 1765747  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
     ||||||||||||||| ||||| || ||| ||   ||||||||||||||||||||    
T  1765746 ttttcgaaacttaaaa-actaacttaggaattcgttcaaactaaaaggactaaaa 1765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 10685999 - 10685852
Alignment:
Q  21 aggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 120  Q
    |||||||||||| |||||||||||||| |||||        ||| | |||||||||||||| |||| |||||| |||||||||||||||||| ||| |||    
T  10685999 aggggtaacggtaaaatagtttatcaactaaaa--------tgacatatttgaaacttaaaggactaacttggaaattctgtcaaactaaaaagacgtaa 10685908  T
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||| |||||||||||||  ||||| |||  | || |||||||||||||||||    
T  10685907 ttgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggac 10685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 11897947 - 11897841
Alignment:
Q  75 acttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagg 174  Q
    ||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || || ||||||||||||| |    
T  11897947 acttaaaggattaacttgggaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatg 11897848  T
Q  175 actaaaa 181  Q
    || ||||    
T  11897847 accaaaa 11897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 17898850 - 17898992
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| ||||||||||||| |||| | ||| ||||||| ||||||||||| ||||||||||||| |||  |||||||||  ||||| ||| || |    
T  17898850 tatttgaaacttttgaaacttaaaggactaatttgtgaattctatcaaactaaaaggacctaattgaaatttttaaaacttaaagaactaatttgagaat 17898949  T
Q  158 tatgtcaaactaaaaggactaaaa-tgatttttgacctaaaat 199  Q
     |||||||||||||||||| |||| || | |||||||||||||    
T  17898950 catgtcaaactaaaaggaccaaaagtggtatttgacctaaaat 17898992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 44963992 - 44963878
Alignment:
Q  28 acggtgaaatagtttatcaatt-aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| | ||||||  ||||| |||| ||||||||||||| |||| | |||||||| || ||||||||||| ||| | |||||||    
T  44963992 acggtgaaatagtttatcaactgaaaagatatatttaaaacttttgaaacttaaaggactaatttgggaatcctatcaaactaaaaggactttattgaaa 44963893  T
Q  127 ctttcgaaacttaaa 141  Q
    |||||||||||||||    
T  44963892 ctttcgaaacttaaa 44963878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 49650686 - 49650578
Alignment:
Q  68 atttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaa 166  Q
    |||||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||||||| |||| ||| |||||  ||||| ||| || ||||||||||    
T  49650686 atttgaaacttaaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaattttcaaaatttaaaggactaacttgagaattatgtcaaa 49650587  T
Q  167 ctaaaagga 175  Q
    |||||||||    
T  49650586 ctaaaagga 49650578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 1765930 - 1766044
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| |||||| |||||| |||| || || || |||||||||||||||||||| ||||| ||||||| |||| |||||| ||||| ||| || |    
T  1765930 tatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaactaaaatgacataatttaaacttttgaaatttaaaagactaacttgagaat 1766029  T
Q  158 tatgtcaaactaaaa 172  Q
    | ||||||| |||||    
T  1766030 tctgtcaaattaaaa 1766044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 17898794 - 17898908
Alignment:
Q  62 tgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatg 161  Q
    |||||| ||||||| ||||| |||| | |||  |||||||||||||||||||||| || |||||||||| ||||||||||  ||||| ||| || || |     
T  17898794 tgaaacttttgaaatttaaaggactaatttgataattctgtcaaactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattcta 17898893  T
Q  162 tcaaactaaaaggac 176  Q
    |||||||||||||||    
T  17898894 tcaaactaaaaggac 17898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 49651013 - 49651083
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 138  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||||| ||| || |||||||||||||||    
T  49651013 atttgaaacttaaaggactaacttgagaattctgtcaaactaaaatgatctatttaaaactttcgaaactt 49651083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 4772612 - 4772723
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||||| |||||||||||||||| |||||||   ||||     |||||||||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  4772612 gggtaacgatgaaatagtttatcaactaaaaga---attt-----atttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacccaatt 4772703  T
Q  123 gaaactttcgaaacttaaaa 142  Q
     ||| |||| ||||||||||    
T  4772704 aaaaatttcaaaacttaaaa 4772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 27351547 - 27351660
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| | ||| ||||||| ||||| ||||| ||| ||||| |||||||||||||||||| ||  || ||| || ||||||||||     
T  27351547 atttgaaacttaaaggactaatttgagaattctatcaaaataaaacgacataattaaaactttcgaaacttaaagtatcaacttgagaattatgtcaaat 27351646  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  27351647 taaaaggaccaaaa 27351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 44964018 - 44964130
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||| ||| ||||| |||| ||||| ||||||||||||||||||| |||||| ||||||||||  |||||||||  | ||| ||| || ||     
T  44964018 tttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacctatttgaaacttttaaaacttaaaggaataacttgagaattc 44964117  T
Q  160 tgtcaaactaaaa 172  Q
    |||||||||||||    
T  44964118 tgtcaaactaaaa 44964130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 1765881 - 1765984
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| || | |||||| |||||||||||||||||||||| || |||||||||| ||| ||||||  |||||  || || || |||||||||    
T  1765881 tttgaaacttaaaggagtaacttggaaattctgtcaaactaaaatgacttatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaact 1765980  T
Q  169 aaaa 172  Q
    ||||    
T  1765981 aaaa 1765984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 11897908 - 11897845
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11897908 gacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacc 11897845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 39302427 - 39302339
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||||||||||||||||| |||||| ||||| | ||||| |||||||||||||  | | | ||| |||||||||||||||||||    
T  39302427 gtaacggtgaaatagtttatcaactaaaagaacctaatcgaaacttttgaaacttaaagaattaatttgtgaattctgtcaaactaaaa 39302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 48352366 - 48352272
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaat----gactgacttgggaattctgtcaa 105  Q
    |||| |||||||| ||||||||||||||||||| |||||| ||||||||||||| ||| |||| |||||    |||| ||||||||||||||||||    
T  48352366 gacagcaggggtagcggtgaaatagtttatcaactaaaagaacctatttgaaac-ttttaaacctaaatgacggactaacttgggaattctgtcaa 48352272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 4030390 - 4030342
Alignment:
Q  94 gaattctgtcaaactaaaatg-acctaattgaaactttcgaaacttaaa 141  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4030390 gaattctgtcaaactaaaaaggacctaattgaaactttcgaaacttaaa 4030342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 27351186 - 27351114
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 177  Q
    |||||||||||| || |||| ||||| ||||||||||  ||||| ||| || |||||||||||||||||||||    
T  27351186 aactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggact 27351114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 8903237 - 8903340
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| |||||||| |||| ||| ||||| ||  |||||||||| || |||||||||| || | ||||| ||||| |||||||||||||     
T  8903237 gacaacaggggtaacagtgaaataatttagcaactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaa 8903336  T
Q  114 gacc 117  Q
    ||||    
T  8903337 gacc 8903340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 34254998 - 34255070
Alignment:
Q  55 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    ||||||||||||| |||||||||||||   || |||||| |||||||||||||||||   ||||||||||||||    
T  34254998 acctatttgaaacttttgaaacttaaaat-ctaacttggaaattctgtcaaactaaatatacctaattgaaact 34255070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 2965583 - 2965499
Alignment:
Q  29 cggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |  | |||||  ||||| ||||||||||||    
T  2965583 cggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggtataacttgaaaattcggtcaaactaaaa 2965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 8903268 - 8903344
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||  || |||||||||||||||||||||  | ||| ||| || |||||||||||||||| ||| ||||    
T  8903268 aactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaagaccaaaa 8903344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 10685918 - 10685851
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| || ||||||| || |||||||||| |||| |||||  |||||||||||||||||| ||||    
T  10685918 aaaagacgtaattgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 10685851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 4772223 - 4772171
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 120  Q
    |||||||||||||| ||||  |||| ||||| ||||||||||||| |||||||    
T  4772223 atttgaaacttaaaggactaccttgtgaattttgtcaaactaaaaggacctaa 4772171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 8902896 - 8902824
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 177  Q
    |||||||| ||| || || ||||||| ||||||||||  ||||| |||||| || ||||||||||||| ||||    
T  8902896 aactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaatgact 8902824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 27351110 - 27351054
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| || |||||||||| |||| ||||| ||||||||||||| ||||| ||||    
T  27351110 ttgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaaagacc 27351054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 39302753 - 39302809
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| ||| ||| ||||| |||| ||||| ||||||||||||||||||| ||||    
T  39302753 ttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 39302809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 35214973 - 35214811
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| |||| ||||| |||||||||||||||||||     
T  35214973 gacaacaggggtaacggtgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaag 35214874  T
Q  114 gacctaattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaagga 175  Q
    ||||||||||||||||| |||||||||||  ||||| || | | || ||||||||||||||||    
T  35214873 gacctaattgaaacttttgaaacttaaaagaactaacttagaaattctgtcaaactaaaagga 35214811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 1441400 - 1441571
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| ||||||||||||||||| |||||| ||||||||         |||||||||| |||| ||||||||||||| ||||||||||||    
T  1441400 gacagcaggggtaacagtgaaatagtttatcaactaaaaggacctattt---------gaaacttaaaagactaacttgggaattctatcaaactaaaat 1441490  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacc 193  Q
    ||||||||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||| |||| |||| |||||||    
T  1441491 gacctaattgaaactttcgaaacctaaaggactaacttgggaattatgtcaaactaaaaggaccaaaagtgatatttgacc 1441571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 19925311 - 19925455
Alignment:
Q  30 ggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    |||||||||||||||||| | |||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| || |||||| |||||    
T  19925311 ggtgaaatagtttatcaactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatctaattaaaact 19925410  T
Q  129 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||| ||||||||  ||||| |||||| || ||||||||||||||    
T  19925411 ttcgcaacttaaaggactaagttgggaattttgtcaaactaaaag 19925455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 5559270 - 5559111
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| | ||| ||||||||||| | ||||||||||| || |    
T  5559270 caggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaaggactaacttgggaattttatcaaactaaaaggatc 5559171  T
Q  118 taattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaaggac 176  Q
    || |||||||||| |||||||||||  ||||| |||||| || ||||||| |||||||||    
T  5559170 tatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggac 5559111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 31893362 - 31893257
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || || ||||||||    
T  31893362 atttgaaacttaaaagactaacttaggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaac 31893263  T
Q  168 taaaag 173  Q
    ||||||    
T  31893262 taaaag 31893257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 5805186 - 5805042
Alignment:
Q  33 gaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttc 131  Q
    ||||||||||||||| |||||| ||||| || |||| ||||||||||||| || |  |||| ||||||||||||||||||| ||||||||||||||||||    
T  5805186 gaaatagtttatcaactaaaaggacctagttaaaacttttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacctaattgaaactttc 5805087  T
Q  132 gaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||  ||||| ||| || || |||||||||||||||||    
T  5805086 gaaacttaaaggactaacttgagaattctgtcaaactaaaaggac 5805042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 33879514 - 33879641
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    |||||||||||||| ||||||||||||| || | |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||| |||     
T  33879514 gacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacctaattgaaactttcgaaacttaaaggactaacttgt 33879613  T
Q  154 gagttatgtcaaactaaaaggactaaaa 181  Q
    || || ||||||||||||||||| ||||    
T  33879614 gaattctgtcaaactaaaaggaccaaaa 33879641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 21433266 - 21433149
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||  ||||| ||| || |    
T  21433266 tatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggacttaattgaaacattcgaaacttaaaggactaacttgtgaat 21433167  T
Q  158 tatgtcaaactaaaagga 175  Q
    | ||||||||||||||||    
T  21433166 tttgtcaaactaaaagga 21433149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 1286534 - 1286369
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||  || |||||||| ||||||| |||||||||||| ||||||||||||| |||| ||||  ||||||| |||||||||||     
T  1286534 gacagcaggggtaacggtga--taatttatcaactaaaagaacctatttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaag 1286437  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||| |||| |||||| ||||| |||  | || | ||||||||||||||| ||||    
T  1286436 gacctaattgaaacttttgaaatttaaaaaactaatttgaaaattctatcaaactaaaaggacgaaaa 1286369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 23150790 - 23150643
Alignment:
Q  30 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    |||||||||||||||||| ||||| ||  |||||||||| ||||||||||||| |||| |  || ||||||||||||| ||||||||| |||||||||||    
T  23150790 ggtgaaatagtttatcaactaaaatgatttatttgaaacttttgaaacttaaaagactaatctgagaattctgtcaaattaaaatgacttaattgaaact 23150691  T
Q  129 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||| ||| |||||  ||||| ||| || ||||||||||||||||||||    
T  23150690 ttcaaaatttaaaggactaacttgagaattatgtcaaactaaaaggac 23150643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 27995227 - 27995065
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| ||||||||||||||||| |||||  || ||||||| || ||||||||||||| || | ||||| ||||||||||||| ||||||    
T  27995227 gacagcaggggtaacagtgaaatagtttatcaactaaaattacttatttgatacttttgaaacttaaaggattaacttgagaattctgtcaaattaaaat 27995128  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    || ||| || ||| ||| ||||||||||| ||||| ||| || || |||||||||||||||||    
T  27995127 gatctatttcaaatttttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggac 27995065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 28256652 - 28256498
Alignment:
Q  22 ggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 120  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||| || ||      
T  28256652 ggggtaacagtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaactaaaaggatctct 28256553  T
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    || ||||||| |||| |||||  | ||| |||||| || ||||||||||||||||    
T  28256552 ttaaaacttttgaaatttaaagaagtaacttgggaattctgtcaaactaaaagga 28256498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 33235200 - 33235042
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||||| |||||||| ||||||| ||||| | || |||||||||||||||||||| ||||     
T  33235200 gacaacaggggtaacgatgaaatagtttatcaactaaaatgacctctttgaaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaag 33235101  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    |||||||||||||||||  ||| |||||  | ||| ||| || || |||||||||||||    
T  33235100 gacctaattgaaacttttaaaatttaaaggattaacttgagaattctgtcaaactaaaa 33235042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 39959152 - 39959314
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||||||| | |||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||     
T  39959152 gacatcagcgttaacggtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaacttaaatgattaacttggaaattctgtcaaactaaaag 39959251  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
     | ||| ||||||||||  ||| |||||  ||||| ||   | || |||||||||||||||||    
T  39959252 aatctatttgaaacttttcaaatttaaatgactaatttaaaaattctgtcaaactaaaaggac 39959314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 1349114 - 1349269
Alignment:
Q  22 ggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgac---ttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||| |||| |    |||| |||||||||||||||||||||      
T  1349114 ggggtaacggtgaaatggtttatcaactaaaatgacctatttgaaacttttgaaacttaaaggacttataagttggaaattctgtcaaactaaaatgatt 1349213  T
Q  118 taattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    || || ||||||| ||||||||||| ||||| || | | |||||||||||||||||    
T  1349214 tatttaaaacttttgaaacttaaaagactaacttagaaattatgtcaaactaaaag 1349269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 5559630 - 5559742
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||  |||||||||  ||||| |||||| || ||||||||    
T  5559630 atttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctaattgaaacttt-aaaacttaaaggactaacttgggaattttgtcaaac 5559728  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  5559729 taaaaggaccaaaa 5559742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 20366206 - 20366048
Alignment:
Q  22 ggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 120  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||  |||  || ||||| | ||||||||||||||||||| ||| |||    
T  20366206 ggggtaacggtgaaatagtttatcaactaaaaagacctatttgaaactcttgaaatataagggattgact-gagaattctgtcaaactaaaaggacataa 20366108  T
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||||||||  ||||| ||| || || ||| ||||||||||||| ||||    
T  20366107 ttgaaactttcgaaacttaaaggactaacttgagaattctgt-aaactaaaaggaccaaaa 20366048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 34951377 - 34951266
Alignment:
Q  31 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| |||| ||||  ||||| |||||||| |||| ||||||||||||||||    
T  34951377 gtgaaatagtttatcaactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggacctaattgaaactt 34951278  T
Q  130 tcgaaacttaaa 141  Q
    ||||||||||||    
T  34951277 tcgaaacttaaa 34951266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 10619961 - 10619851
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||| |||||  |||| |||||||||||||  ||||    
T  10619961 cagggataacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaagaacct 10619862  T
Q  119 aattgaaactt 129  Q
    |||||||||||    
T  10619861 aattgaaactt 10619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 22876867 - 22876972
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| || | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||| | ||||||||||||    
T  22876867 tttgaaacttaaaggattaacttgagaattctgtcaaactaaaatgacttaattgaaactttcgaaacttaaaa-attaacttggaaattatgtcaaact 22876965  T
Q  169 aaaagga 175  Q
    |||||||    
T  22876966 aaaagga 22876972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 31175924 - 31176042
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    ||||||| || ||||| ||||||| |||||| |||| |||||||| ||||||||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  31175924 ggtaacgttggaatagattatcaactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaatt 31176023  T
Q  123 gaaactttcgaaacttaaa 141  Q
    ||||||||| ||| |||||    
T  31176024 gaaactttcaaaaattaaa 31176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 40904814 - 40904677
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    ||||||||||| ||| |||||||||||||| | |||  |||| ||||||||||||| |||||||||||||||||  |||||||||| ||||| ||| ||     
T  40904814 ctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaa 40904715  T
Q  157 ttatgtcaaactaaaaggactaaaatgatttttgacct 194  Q
    ||||||||||| |||||||| ||| || | ||||||||    
T  40904714 ttatgtcaaaccaaaaggaccaaagtggtatttgacct 40904677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 1346624 - 1346485
Alignment:
Q  33 gaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcg 132  Q
    ||||||||||||||| ||||||| ||   |||||| ||||||||||||| |||| |||||| |||| ||||||||||||| ||  |||||||||||||||    
T  1346624 gaaatagtttatcaactaaaagaact---tgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaaggatttaattgaaactttcg 1346528  T
Q  133 aaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||||  ||||| ||  || || ||||||||||||||||    
T  1346527 aaacttaaagcactaacttaagaattctgtcaaactaaaagga 1346485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 31893488 - 31893615
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||  |||||||||  ||||| || | | || ||||||||    
T  31893488 atttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaac 31893587  T
Q  168 taaaagga-ctaaaatgatttttgacct 194  Q
    |||||||| | |||||||| ||||||||    
T  31893588 taaaaggaccaaaaatgatatttgacct 31893615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 8039807 - 8039662
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||                 |||| ||||||||||| |||||    
T  8039807 caggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaactta-----------------ttctttcaaactaaaaggacct 8039725  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||||||||||  ||||| ||| || |||||||||||||||||||| ||||    
T  8039724 aattgaaactttcgaaacttaaagaactaacttgagaattatgtcaaactaaaaggacaaaaa 8039662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 21413081 - 21413234
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||  ||| |||| | |||||||||||| ||||| | |||||||||||    
T  21413081 acggtgaagtagtttatgaactaaaaggacctatttgaaacttttgaaacttaaaa-actaacttagaaattctgtcaaattaaaagggcctaattgaaa 21413179  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
     |||||||||| |||  ||||| |||||| || |||| |||||||||||| ||||    
T  21413180 ttttcgaaactaaaataactaatttgggaattctgtcgaactaaaaggaccaaaa 21413234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 35215290 - 35215443
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||||||  |||||||||||||||| ||||| ||  |||||||||| ||| ||||||||| |||| | |||| |||||||||||| ||||||||| ||||    
T  35215290 gggtaacaatgaaatagtttatcaactaaaatgagttatttgaaacttttaaaacttaaaagactaatttggaaattctgtcaaattaaaatgacttaat 35215389  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||||| |||||||| |||||  ||||| |||  | || ||||||||||||||||    
T  35215390 tgaaattttcgaaatttaaaggactaacttgaaaattttgtcaaactaaaagga 35215443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 21412989 - 21412865
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    |||||| |||| ||||||||||||| |||| |||||  |||||||||||||||||| || ||||||||||||||| |||||||||  | ||| ||  ||     
T  21412989 ctatttaaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatctaattgaaactttcaaaacttaaaggattaacttaagaa 21412890  T
Q  157 ttatgtcaaactaaaaggactaaaa 181  Q
    || ||||||||||||||||||||||    
T  21412889 ttctgtcaaactaaaaggactaaaa 21412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 23679497 - 23679603
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||||||||||||||||||||||| ||||| |  |||||| |||| ||||||||||||| |||| ||||| |||||||||||||||||||  |||||||    
T  23679497 gggtaacggtgaaatagtttatcaactaaaataatctattttaaacttttgaaacttaaa-gactaacttgagaattctgtcaaactaaaagaacctaat 23679595  T
Q  122 tgaaactt 129  Q
    ||||||||    
T  23679596 tgaaactt 23679603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 36566400 - 36566282
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgg-gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    |||||||||  ||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||  ||     
T  36566400 tatttgaaaattttgaaacttaaa-gactaactttgagaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaatgactaacttaagaa 36566302  T
Q  157 ttatgtcaaactaaaaggac 176  Q
    || |||||||||||||||||    
T  36566301 ttctgtcaaactaaaaggac 36566282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 20101974 - 20101831
Alignment:
Q  28 acggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| ||| |||  |||||| |||| ||| ||||||||| |||| |||||  ||| ||||| |||||||| || ||||||||||    
T  20101974 acggtgaaatagtttatcaactaagagaatctatttaaaacttttaaaacttaaaggactaacttgaaaat-ctgtcgaactaaaaggatctaattgaaa 20101876  T
Q  127 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    |||||||||||||||| ||||| |||||| ||  ||||||||||||    
T  20101875 ctttcgaaacttaaaa-actaacttgggaattcagtcaaactaaaa 20101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 28256949 - 28257062
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||| ||||||||| |||| |||||  |||| ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||  || |||| ||||||    
T  28256949 atttaaaacttaaaggactaacttgaaaattttgtcaaactaaaatgacctaattgaaattttcaaaacttaaaaaactaactttagaattatatcaaac 28257048  T
Q  168 taaaaggactaaaa 181  Q
    ||||||||| ||||    
T  28257049 taaaaggacaaaaa 28257062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 21433337 - 21433408
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||    
T  21433337 tatttgaaacttttgaaacttaaaggattaacttgggaattctgtcaaactaaaatgacgtaattgaaactt 21433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 33235518 - 33235637
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||   ||||||||||||| |||| |||||  |||| ||||||||||||| |||| |||    
T  33235518 gggtaacagtgaaatagtttatcaactaaaatgacctatttgaagtttttgaaacttaaaggactaacttgataattttgtcaaactaaaaggaccaaat 33235617  T
Q  122 tgaaactttcgaaacttaaa 141  Q
    | |||||||| |||| ||||    
T  33235618 taaaactttcaaaacgtaaa 33235637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 39958776 - 39958686
Alignment:
Q  91 tgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||| ||   | |||||||||||||||||||| ||||    
T  39958776 tgggaattctgtcaaactaaaatgacttaattgaaactttcgagacttaaatgactaacttaaaaattatgtcaaactaaaaggaccaaaa 39958686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 21413047 - 21412931
Alignment:
Q  59 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtt 158  Q
    |||| |||| ||||||||||||| |||| ||||| ||||||||| |||||||||||| ||| || ||||||| ||||||||||  ||||| |||  | ||    
T  21413047 atttaaaacttttgaaacttaaaagactaacttgagaattctgtgaaactaaaatgatctatttaaaacttttgaaacttaaaggactaacttgaaaatt 21412948  T
Q  159 atgtcaaactaaaagga 175  Q
     ||||||||||||||||    
T  21412947 ctgtcaaactaaaagga 21412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 34951475 - 34951587
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||||| || | |||| ||||||||||||| || |||||||||||||||||||||||||  ||||| |||  | || |||||||||    
T  34951475 tttgaaacttaaaggactgatttagaaattgtgtcaaactaaaaggatctaattgaaactttcgaaacttaaaggactaacttgataattctgtcaaact 34951574  T
Q  169 aaaaggactaaaa 181  Q
    |||| ||| ||||    
T  34951575 aaaaagaccaaaa 34951587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 5805592 - 5805679
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||||||||| ||||||||||||| || | |||||  ||||| |||||||||||| ||| |||||||||||||| |||||||||    
T  5805592 gacctatttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggacataattgaaactttcaaaacttaaa 5805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 20183935 - 20183778
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| |||||||| |||||||| ||||| ||| |||||||||  ||||||||||||| |||| ||||||||| ||| | ||| | |||     
T  20183935 gacaacaggggtaacagtgaaataatttatcaactaaaatgacttatttgaaatttttgaaacttaaaggactaacttgggaactctattaaa-ttaaag 20183837  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    || ||||||||||||||| ||| |||||  ||| |||||  | || |||||||||||||    
T  20183836 gatctaattgaaactttcaaaatttaaagaactgaattgtaaattctgtcaaactaaaa 20183778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 41020137 - 41020242
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    |||||||||||||  | | |||| | |||||||||||||||||| || |||||| |||||||| |||||||||| ||||| |||| | ||||||||||||    
T  41020137 tttgaaacttaaagaattaacttagaaattctgtcaaactaaaaggatctaattaaaactttcaaaacttaaaa-actaacttggaaattatgtcaaact 41020235  T
Q  169 aaaagga 175  Q
    |||||||    
T  41020236 aaaagga 41020242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 4187626 - 4187545
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||| |||||||||||||  ||| ||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||    
T  4187626 tttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaagtacctaattgaaactttctaaacttaaa 4187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 21433278 - 21433391
Alignment:
Q  60 tttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtt 158  Q
    |||||||  ||||||||||||| | ||| |||||||||||||||||||| ||||| || || |||||||||| ||||||||||  | ||| |||||| ||    
T  21433278 tttgaaatttttgaaacttaaaagtactaacttgggaattctgtcaaacaaaaataacttatttgaaacttttgaaacttaaaggattaacttgggaatt 21433377  T
Q  159 atgtcaaactaaaa 172  Q
     |||||||||||||    
T  21433378 ctgtcaaactaaaa 21433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 42990658 - 42990539
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||||||||| ||||||| |||||| ||||| ||| || || |||| ||| |||||||||  | | |||||  ||||||||| |||||||||||||||||    
T  42990658 gggtaacggtaaaatagtgtatcaactaaaatgacataattaaaacttttaaaacttaaaaaattaacttgaaaattctgtcgaactaaaatgacctaat 42990559  T
Q  122 tgaaactttcgaaacttaaa 141  Q
    | |||||||| |||||||||    
T  42990558 taaaactttcaaaacttaaa 42990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 8040114 - 8040266
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||||||||||||||| ||||| |||||| |||||||||||||         ||||| |||| |||||||| ||||||||| ||||||     
T  8040114 gacagcaggggtaacggtgaaatagttcatcaactaaaaggacctatttgaaac---------ttaaaggactaacttggga-ttctgtcaagctaaaag 8040203  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    || ||| |||||| ||| ||||||||||| ||||| |||| | ||  || |||||||||||||    
T  8040204 gatctatttgaaatttttgaaacttaaaagactaatttggaaattccgttaaactaaaaggac 8040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 10620238 - 10620303
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcga 133  Q
    |||||||||||||| |||| |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  10620238 atttgaaacttaaaggacttacttggaaattctgttaaactaaaagggcctaattgaaactttcga 10620303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 19925228 - 19925104
Alignment:
Q  56 cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggga 155  Q
    ||||||||| |  ||||||||||||| |||| | |||| |||| ||||||||||||| || |||||||||||||||||||||| ||  | ||| |||| |    
T  19925228 cctatttgatatttttgaaacttaaaggactaa-ttggaaattgtgtcaaactaaaaggatctaattgaaactttcgaaacttgaaggagtaacttggaa 19925130  T
Q  156 gttatgtcaaactaaaaggactaaaa 181  Q
     || ||||||||||||| ||| ||||    
T  19925129 attctgtcaaactaaaaagaccaaaa 19925104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 20366521 - 20366658
Alignment:
Q  40 tttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 138  Q
    |||||||| |||||| || |||||||||| |||||||| |||| |||| ||||| ||||| ||||||||||||| || ||  | |||||||| |||||||    
T  20366521 tttatcaactaaaaggacatatttgaaacttttgaaacctaaaggactaacttgcgaattttgtcaaactaaaaggatcttttggaaacttttgaaactt 20366620  T
Q  139 aaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||  ||||| |||| | || |||  ||||||||||||    
T  20366621 aaaggactaacttggaaattctgtttaactaaaaggac 20366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 36566458 - 36566377
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||| ||||||| ||||| |||| ||||| ||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  36566458 tttgaaacttttgaaatttaaaggactaacttgagaattttgtcaaactaaaatgacttatttgaaaattttgaaacttaaa 36566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 4187663 - 4187763
Alignment:
Q  30 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 128  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||| ||| ||||| |||| |||||  |||||||||||| ||||| || |||||| |||||    
T  4187663 ggtgaaatagtttatcaactaaaatgacctatttaaaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaaggatctaattaaaact 4187762  T
Q  129 t 129  Q
    |    
T  4187763 t 4187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 6220351 - 6220449
Alignment:
Q  32 tgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaacttt 130  Q
    |||||||||||||||| |||||| |||||||  |||| ||||||||||||| |||| ||||| ||||||| | |||||||||  |||| |||||||||||    
T  6220351 tgaaatagtttatcaactaaaagaacctattgaaaacttttgaaacttaaa-gactaacttgagaattctatgaaactaaaagtaccttattgaaacttt 6220449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 33879470 - 33879576
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||| |||||| |||||||||| ||||||||||  | ||| |||| | || ||||||| |    
T  33879470 tttgaaacttaag-gactaacttgggaattatgtcgaactaaaaggacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaatt 33879568  T
Q  169 aaaaggac 176  Q
    ||||||||    
T  33879569 aaaaggac 33879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 1286768 - 1286834
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgact 86  Q
    ||||||||||||||||||| |||||||| |||||||| ||||| |||| ||| ||||||||| ||||    
T  1286768 caggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggact 1286834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 1441065 - 1441011
Alignment:
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  1441065 ttgaaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaagga 1441011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 28104394 - 28104300
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| |||||||| |||||||| ||||| ||| ||||| |||| ||||||||||||||||||  |||| ||||| || |||||||||| ||||    
T  28104394 ggtaacagtgaaataatttatcaactaaaaagacatatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaaggacc 28104300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 27995538 - 27995615
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgactt 91  Q
    |||| |||| ||||||||||||||||||||||| ||||| || |||||| |||| ||||||||||||| |||| ||||    
T  27995538 gacaacaggagtaacggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaactt 27995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 1441066 - 1441014
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  1441066 tttgaaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaa 1441014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 5075444 - 5075325
Alignment:
Q  83 gactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaa 181  Q
    |||| ||||| ||||||||||||| ||||| |||  ||||||||||||  |||||||||  ||||| ||| ||| | |||||||||||||| | | || |    
T  5075444 gactaacttgagaattctgtcaaa-taaaaggactcaattgaaacttttaaaacttaaaggactaacttgagagatctgtcaaactaaaagaatcaaaca 5075346  T
Q  182 tgatttttgacctaaaatata 202  Q
    |||| ||||||||||||||||    
T  5075345 tgatatttgacctaaaatata 5075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 5805104 - 5805041
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| || |||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  5805104 gacctaattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 5805041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 29591057 - 29591171
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactg--acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggga 155  Q
    ||||| |||| ||||||||||||| || |   ||||| | ||| ||||||||||||||||||||||| ||||||| ||||||||||  ||||| |||  |    
T  29591057 tatttaaaacttttgaaacttaaaggattataacttgcggattttgtcaaactaaaatgacctaattaaaacttttgaaacttaaaggactaacttgata 29591156  T
Q  156 gttatgtcaaactaa 170  Q
     |||| |||||||||    
T  29591157 attatatcaaactaa 29591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 35214942 - 35214871
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||| |||||| |||||| ||| ||||||||||| ||||| ||| || || |||||||||||||||||    
T  35214942 aactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggac 35214871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 19925327 - 19925397
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||| ||| |||||| |||||||||| ||||||||||  ||||| |||||| || ||||||||||||||||    
T  19925327 aactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaagga 19925397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 34951415 - 34951521
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| | | || || | ||||| ||||||||||  ||| | || | | || |||||||||    
T  34951415 tttgaaacttaaatgactaacttgagaattgtgtcaaactaaaaggtcatattttatacttttgaaacttaaaggactgatttagaaattgtgtcaaact 34951514  T
Q  169 aaaagga 175  Q
    |||||||    
T  34951515 aaaagga 34951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 40904837 - 40904755
Alignment:
Q  94 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||| ||||| || ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  40904837 gaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggac 40904755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 5559171 - 5559110
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||||||||||| ||||| ||||    
T  5559171 ctatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggacc 5559110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 28104372 - 28104279
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaa 198  Q
    |||||||| ||| || || ||||||| ||||||||||  ||||  ||| || ||||| |||||||||||||| ||||| || ||||||||||||    
T  28104372 aactaaaaagacatatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaaggaccaaaataatatttgacctaaaa 28104279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 31893438 - 31893498
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    ||||||||||||| |||| ||||| ||||| ||||||||||||| ||| || |||||||||    
T  31893438 tttgaaacttaaaggactaacttgagaattttgtcaaactaaaaggacttatttgaaactt 31893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 33879417 - 33879349
Alignment:
Q  74 aacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaa 142  Q
    |||| |||||||| |||||  |||||||||||| ||||| || |||||| |||||||| ||||||||||    
T  33879417 aactaaaatgactaacttgataattctgtcaaaataaaaggatctaattaaaactttcaaaacttaaaa 33879349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 5805583 - 5805654
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||| |||||||||| ||||||||||| | ||| |||  | ||  ||||||||||||||||    
T  5805583 aactaaaatgacctatttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggac 5805654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 21433282 - 21433207
Alignment:
Q  102 tcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 177  Q
    |||||||||||  || || |||||||||| ||||||||||  ||||| |||||| || | ||||||||||||||||    
T  21433282 tcaaactaaaagaacttatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggact 21433207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 31175946 - 31176017
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||| |||||  |||||||||| ||||||||||  ||||| |||| | || |||||||||||||||||    
T  31175946 aactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 31176017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 31893534 - 31893597
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| ||| ||||||||| |||| |||| | |||||||||||||||||| ||||    
T  31893534 gacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaactaaaaggacc 31893597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 34951362 - 34951291
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||||||| || |||||||||| ||||||||||  ||||| ||  || ||||||||||| ||||||||    
T  34951362 aactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggac 34951291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 36566344 - 36566281
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| ||  |||||||||||||| ||||  ||||||||||||||||||| ||||    
T  36566344 gacctaattgaaactttcaaaacttaaatgactaacttaagaattctgtcaaactaaaaggacc 36566281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 36566525 - 36566568
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaa 111  Q
    |||||||||||||| |||| |||||| |||||||||||||||||    
T  36566525 atttgaaacttaaaagactaacttggaaattctgtcaaactaaa 36566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 31893316 - 31893258
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| ||||||| || ||||||||||  ||| ||||| |||||||||||||||||||    
T  31893316 gacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaactaaaa 31893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 33235100 - 33235039
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatga 115  Q
    |||||| ||||||| ||| ||| ||||| || | ||||| ||||||||||||||||||||||    
T  33235100 gacctaattgaaacttttaaaatttaaaggattaacttgagaattctgtcaaactaaaatga 33235039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 4187625 - 4187573
Alignment:
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||||||| ||||||||||  ||||| |||||| ||||||||||| |||||    
T  4187625 ttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaag 4187573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 10619935 - 10619867
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||||||| |||||| |||||||||| ||||||||||  ||||| |||  | || ||||||||||||||    
T  10619935 aactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaag 10619867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 27995112 - 27995064
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||| ||||    
T  27995112 tttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggacc 27995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 34951527 - 34951583
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| || |||||||||| |||| |||||  |||||||||||||||||| ||||    
T  34951527 ttgaaactttcgaaacttaaaggactaacttgataattctgtcaaactaaaaagacc 34951583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 36418365 - 36418516
Alignment:
Q  22 ggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 120  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||| |||||  |||| ||||||||||||| |||||||    
T  36418365 ggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacctaa 36418464  T
Q  121 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    |||||||||| ||||| ||||  ||||| ||| || ||||||||||||||||    
T  36418465 ttgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaa 36418516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 20728686 - 20728527
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    |||||||||||||||||||| |||| ||||| ||| |||||||||| ||| ||||||||| |||| ||||| ||||||||| ||||||||| ||||||||    
T  20728686 gggtaacggtgaaatagtttttcaactaaaaagacatatttgaaacttttaaaacttaaaggactaacttgagaattctgttaaactaaaaggacctaat 20728587  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||| |||||||||||||||  ||||| |||| | || ||||||||||||| ||| ||||    
T  20728586 tgaatctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaagaccaaaa 20728527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 13543241 - 13543083
Alignment:
Q  27 aacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactga---cttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| |||| |   ||||| |||||  ||||||||||| |||||||||    
T  13543241 aacggtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaaggactaataacttggaaattccatcaaactaaaaagacctaatt 13543142  T
Q  123 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||||||  | ||| || ||| |||||||||||||||||||| ||||    
T  13543141 gaaactttcgaaacttaaagaattaacttaggaattatgtcaaactaaaaggaccaaaa 13543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 30738223 - 30738377
Alignment:
Q  23 gggtaacggtgaaatagtttatca--attaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 119  Q
    ||||||||||||||||||||||||  | ||||| ||| |||||||||| |||||||| |||| |||  ||||| ||||||||||||| ||||||||||||    
T  30738223 gggtaacggtgaaatagtttatcacaactaaaatgacatatttgaaacttttgaaacataaaggacaaacttgagaattctgtcaaattaaaatgaccta 30738322  T
Q  120 attgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||| ||| ||||||||||||||||||||| || | | || ||||||||||||||||    
T  30738323 att-aaaatttcgaaacttaaaatactaacttcgaaattctgtcaaactaaaagga 30738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 18249124 - 18248996
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||| ||||||||| |||||||||     
T  18249124 gacagcaggggtaacgatgaaatagtttatcaactaaaaagacctatttaaaacttttgaaacttaaatgactaacttgagaattctgttaaactaaaag 18249025  T
Q  114 gacctaattgaaactttcgaaacttaaaa 142  Q
    ||| || || |||||||| |||| |||||    
T  18249024 gacatagttaaaactttcaaaacgtaaaa 18248996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 5734628 - 5734502
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||||||||||||||||||||| || ||||| ||| |||||||||| ||| ||||||||| || | |||| |||||||||||||| ||||||    
T  5734628 gacagcaggggtaacggtgaaatagtttattaactaaaatgacttatttgaaacttttaaaacttaaagga-taacttaggaattctgtcaaattaaaat 5734530  T
Q  114 gacctaattgaaactttcgaaacttaaa 141  Q
    ||| |||||||||||||| |||||||||    
T  5734529 gacataattgaaactttcaaaacttaaa 5734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 6336298 - 6336458
Alignment:
Q  28 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 126  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||| ||||| |||| |||| ||||||||| |||| |||||  | ||||||||||    
T  6336298 acggtgaaatagtttatcaactgaaaggacatatttgaaacatttgaaatttaaaggactaacttaggaattctgacaaattaaaagaatctaattgaaa 6336397  T
Q  127 ctttcgaaactt-aaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacct 194  Q
    |||||||||||| |||| |||||        |||||||||||||||||||| |||||||| ||||||||    
T  6336398 ctttcgaaacttaaaaagactaa--------ttatgtcaaactaaaaggaccaaaatgatatttgacct 6336458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 5734944 - 5735100
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||| |||| ||||| ||||||||| ||||||||| ||| |    
T  5734944 caggggtaatggtgaaatagtttatcaactaaaatgacctatttgaaacttttg-aacttaaaggactaacttgagaattctgttaaactaaaaggacat 5735042  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||| ||| |||||||| |||||  ||||| ||| || ||   |||||||||||||||    
T  5735043 aattaaaattttcgaaatttaaatgactaacttgagaattcgatcaaactaaaaggac 5735100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 32660379 - 32660266
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| ||| || ||     
T  32660379 tttgaaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgagaattt 32660280  T
Q  160 tgtcaaactaaaag 173  Q
    ||| ||||||||||    
T  32660279 tgtaaaactaaaag 32660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 30737900 - 30737779
Alignment:
Q  21 aggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 119  Q
    |||||||||||| ||| |||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| | ||| ||||| ||||||||||||| ||| ||    
T  30737900 aggggtaacggtaaaacagtttatcaacttaaatgacttatttaaaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaaagacgta 30737801  T
Q  120 attgaaactttcgaaacttaaa 141  Q
    |||||||||||||||| |||||    
T  30737800 attgaaactttcgaaatttaaa 30737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 60 - 176
Target Start/End: Complemental strand, 6336263 - 6336147
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||||||||||||| |||| |||||| |||||| |||||||||||||||||| || ||||||| ||||||||||  ||||| |||| | ||     
T  6336263 tttgaaacttttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttggaaattc 6336164  T
Q  160 tgtcaaactaaaaggac 176  Q
    || ||||||||||||||    
T  6336163 tgccaaactaaaaggac 6336147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 32459525 - 32459430
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||||||||| ||||    
T  32459525 gggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggacc 32459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 35190024 - 35189898
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 168  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||| || || | ||||| |    
T  35190024 tttgaaacttaaaggactaacttgggagttctgtcaaactaaaatgacctatttaaaactttcgaaactt-aaagactaacttgagaattctatcaaatt 35189926  T
Q  169 aaaaggactaaaa-tgatttttgaccta 195  Q
    |||| |||||||| |||| |||||||||    
T  35189925 aaaatgactaaaagtgatatttgaccta 35189898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 18951429 - 18951307
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 153  Q
    ||||||||| |||| ||| ||||||||| |||| ||||| ||||||| ||||||||||| || ||| || ||||||| ||||||||||  ||||| ||||    
T  18951429 gacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaaggatctatttaaaacttttgaaacttaaaggactaacttgg 18951330  T
Q  154 gagttatgtcaaactaaaaggac 176  Q
    || || |||||||||||||||||    
T  18951329 gaattctgtcaaactaaaaggac 18951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 26275616 - 26275511
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||  ||||| || | | || ||||||||    
T  26275616 atttgaaacttgaatgactaacttgggaattccgtcaaactaaaatgatctatttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaac 26275517  T
Q  168 taaaag 173  Q
    ||||||    
T  26275516 taaaag 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 32660325 - 32660238
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||| ||| |||||||||  || ||||||||||||||||||||||||    
T  32660325 gacctatttgaaacttttgaaacttaaaggactaacttgagaattttgtaaaactaaaagaacataattgaaactttcgaaacttaaa 32660238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 13538625 - 13538468
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatg----actgacttgggaattctgtcaaactaaaatga 115  Q
    |||||||||||||||||||||||||||| |||||        ||| | |||||||||||||| |    | | |||||  |||||| ||||||||||  ||    
T  13538625 caggggtaacggtgaaatagtttatcaactaaaa--------tgacatatttgaaacttaaaaggactaataacttgaaaattctatcaaactaaacaga 13538534  T
Q  116 cctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||||||| ||||  ||||| || ||| |||||||||||||||||||| ||||    
T  13538533 cctaattgaaactttcgaaacgtaaaggactaacttaggaattatgtcaaactaaaaggaccaaaa 13538468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 36417998 - 36417891
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 167  Q
    |||||||||||||| |||| ||||| ||||| |||||||| ||||  ||||||||||||||||||||| |||||  ||||| ||| || || ||| ||||    
T  36417998 atttgaaacttaaaggactaacttgagaattatgtcaaaccaaaagaacctaattgaaactttcgaaatttaaaggactaacttgagaattctgttaaac 36417899  T
Q  168 taaaagga 175  Q
    ||||||||    
T  36417898 taaaagga 36417891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 13543569 - 13543727
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 122  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| || | ||||  |||||||  |||||||||| || ||  |     
T  13543569 ggtaacagtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaatttaaaggattaacttaagaattcttccaaactaaaaggatctgtta 13543668  T
Q  123 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
     ||||||| |||| |||||| ||||| ||| || || ||||||||||||| || |||||    
T  13543669 aaaacttttgaaatttaaaaaactaatttgagaattctgtcaaactaaaaagagtaaaa 13543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 20729010 - 20729100
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||| ||| ||| ||||| |||| |||||  ||||||||||||||||||    
T  20729010 gggtaatggtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaatttaaaggactaacttgaaaattctgtcaaactaaaa 20729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 38405573 - 38405654
Alignment:
Q  94 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||  | ||| |||||| || ||| ||||||||||||    
T  38405573 gaattctgccaaactaaaatgacataattgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaagga 38405654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 18238306 - 18238390
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaact 108  Q
    |||||||||||||| |||||||| ||||| ||||||||| |||| ||||||||||||| |||| |||||| |||| |||||||||    
T  18238306 gtaacggtgaaataatttatcaactaaaatgacctatttaaaacttttgaaacttaaacgactaacttggaaattttgtcaaact 18238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 35891219 - 35891317
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaagacct-atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| ||||||||||| ||||||||||||||||  |||| | || ||||||||| ||||||||||||| |||| |||||  |||| |||||||||||||    
T  35891219 gacagcaggggtaacgctgaaatagtttatcaacaaaaaaaacttatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaa 35891317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 31813954 - 31814003
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  31813954 atttgaaacttaaatgactaacttgggaattctgtcaaactaaaaggacc 31814003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 1722648 - 1722504
Alignment:
Q  33 gaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttc 131  Q
    |||||| ||||| || ||||| ||| |||||||||| ||||||||||||| || | ||||| ||||| |||||||||||||  | ||| || |||||||     
T  1722648 gaaataatttataaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 1722549  T
Q  132 gaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||| |||||  ||||| ||| || || ||| |||||||||||||    
T  1722548 gaaaattaaaggactaacttgtgaattttgttaaactaaaaggac 1722504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 18951366 - 18951306
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  18951366 ctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 18951306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 35190426 - 35190497
Alignment:
Q  70 ttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    |||||||||||| |||  | ||| ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  35190426 ttgaaacttaaaagacaaatttgagaattttgtcaaactaaaaggacctaattgaaactttcaaaacttaaa 35190497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 14235688 - 14235567
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 157  Q
    |||||||||| | ||||||  ||| |||| ||||| ||||||||||||||||||| ||||||||| |||||||   ||||||||  ||||| ||   | |    
T  14235688 tatttgaaacttgtgaaac--aaaggactaacttgagaattctgtcaaactaaaaggacctaattaaaacttttagaacttaaaggactaacttaaaaat 14235591  T
Q  158 tatgtcaaactaaaaggactaaaa 181  Q
    ||| ||||||||||||||| ||||    
T  14235590 tatttcaaactaaaaggaccaaaa 14235567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 32459502 - 32459426
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  32459502 aactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggaccaaaa 32459426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 6336209 - 6336146
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| |||| ||||||||||||| |||| |||||| ||||||| |||||||||| ||||    
T  6336209 gacctatttaaaacttttgaaacttaaaggactaacttggaaattctgccaaactaaaaggacc 6336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 36418389 - 36418460
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||||| |||||| |||||||||| ||||||||||  ||||| |||  | ||||||||||||||||||||    
T  36418389 aactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 36418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 18951449 - 18951368
Alignment:
Q  94 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    ||||||| |||||||||||||||||| || |||||||  |||||||||  ||||| ||| || || | ||||||||||||||    
T  18951449 gaattctatcaaactaaaatgacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaagga 18951368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 19278862 - 19278710
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 121  Q
    ||||||| ||||||||||||||||| ||||| ||  |||||||||   ||||||||||||    | ||||| |||||||||||||||||||  | |||||    
T  19278862 gggtaacagtgaaatagtttatcaactaaaatgatttatttgaaattattgaaacttaaagaggtaacttgagaattctgtcaaactaaaagaagctaat 19278763  T
Q  122 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 175  Q
    | ||| ||| |||| |||||  ||||| ||  || || ||||||||||||||||    
T  19278762 t-aaaattttgaaatttaaaggactaacttaagaattctgtcaaactaaaagga 19278710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 32459822 - 32459911
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||| ||||||||||||||| | |||||| ||||||||||||  ||| ||||||||| |||| | ||| |||||| ||||||| ||||    
T  32459822 ggtaacagtgaaatagtttatcgactaaaaggacctatttgaaatttttaaaacttaaaagactaatttgagaattcggtcaaacgaaaa 32459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 1722933 - 1723044
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| ||||||||||||||||| ||||| ||  ||||| |||| ||| |||||||||  ||| |||| | |||| ||| |||||||||     
T  1722933 gacagcaggggtaacagtgaaatagtttatcaactaaaatgatatatttaaaacttttaaaacttaaaacactaacttagaaattttgttaaactaaaag 1723032  T
Q  114 gacctaattgaa 125  Q
    ||  ||||||||    
T  1723033 gatttaattgaa 1723044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 26275567 - 26275512
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||||||| |||||||||||||  ||| |||| | ||||||||||||||||||    
T  26275567 ctatttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaactaaaa 26275512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 26275971 - 26276055
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||||||||||||||| ||||||| ||||||        || | |||||||||||||| |||| |||||| |||| |||||||||||||    
T  26275971 caggggtaacggtgaaatagcttatcaactaaaag--------gacatatttgaaacttaaaggactaacttggaaattttgtcaaactaaaa 26276055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30737875 - 30737808
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    |||| ||||||| || || ||||||| ||||||||||| ||||| ||| || ||||||||||||||||    
T  30737875 aacttaaatgacttatttaaaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaa 30737808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 36418458 - 36418521
Alignment:
Q  54 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||| ||||||| |||||||| |||| |||| ||||| ||||| ||||||||||||| ||||    
T  36418458 gacctaattgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaaagacc 36418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 38405600 - 38405651
Alignment:
Q  61 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||| || ||||||||||||| | ||||||||||||||| |||||||||    
T  38405600 ttgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaa 38405651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 18238010 - 18237920
Alignment:
Q  23 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    ||||||| |||||||| |||||||| |||||| || ||||| |||| ||| ||||||||| || | ||||   ||||||||||||||||||    
T  18238010 gggtaacagtgaaatattttatcaactaaaaggacttatttaaaacttttaaaacttaaaggattaacttaaaaattctgtcaaactaaaa 18237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 31813894 - 31813948
Alignment:
Q  58 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||||| ||||||| | |||||||  ||||| |||||||||||||||||||    
T  31813894 tatttgaaacttttgaaattaaaatgacatacttgagaattctgtcaaactaaaa 31813948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 31247602 - 31247786
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||  |||||||| |||||||| ||||| ||| |||||||||| |||||||||||||  ||| |||||||||||||||| ||||||||     
T  31247602 gacaacaggggtaatagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcactaacttgggaattctgtccaactaaaag 31247701  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaa 197  Q
    ||||||||||||||||||||||||||||  ||||| |||| | || ||||||| ||||||||| |||| |||| |||| ||||||    
T  31247702 gacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaaaagtgatatttggcctaaa 31247786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 4276301 - 4276174
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||||||||| ||||||||||||||||| ||||| || ||||||||||| |||||||||||||  ||| || |   |||| |||||||||||||     
T  4276301 gacagcaggggtaacagtgaaatagtttatcaactaaaatgaactatttgaaacttttgaaacttaaagaactaacataaaaattatgtcaaactaaaaa 4276202  T
Q  114 gacctaattgaaactttcgaaacttaaa 141  Q
    ||| |||||||||||||| |||||||||    
T  4276201 gacttaattgaaactttcaaaacttaaa 4276174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 21377036 - 21377119
Alignment:
Q  93 ggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||| || ||| |||| | || |||||||||||||||||    
T  21377036 ggaattatgtcaaactaaaatgacctaattgaaactttcgaaatttaaagtattaacttggaaattctgtcaaactaaaaggac 21377119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 35555688 - 35555565
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    ||||| |||||||||||||||||||||| ||||| ||  |||||||||| ||  ||| ||||  |||| |||||  |||||||||||||||||||||  |    
T  35555688 cagggataacggtgaaatagtttatcaactaaaatgatttatttgaaactttcaaaatttaatggactaacttgataattctgtcaaactaaaatgattt 35555589  T
Q  119 aattgaaactttcgaaacttaaaa 142  Q
    |||||||||||| |||||||||||    
T  35555588 aattgaaacttttgaaacttaaaa 35555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 50530332 - 50530230
Alignment:
Q  94 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgac 192  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||| |||  | || |||||||||||||||| | |||||||| ||||||    
T  50530332 gaattctgtcaaactaaaatgacctaattaatacttttgaaacttaaaagactaagttgaaaattctgtcaaactaaaaggatcaaaaatgatatttgac 50530233  T
Q  193 cta 195  Q
    |||    
T  50530232 cta 50530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 4276628 - 4276689
Alignment:
Q  68 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 129  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  4276628 atttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgatctaattgaaactt 4276689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 3088066 - 3088218
Alignment:
Q  21 aggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 119  Q
    |||| ||||||||||||||||||||||||||||| ||||||||         |||||||||| |||| ||| || |||  ||||||||||||| ||| ||    
T  3088066 agggataacggtgaaatagtttatcaattaaaaggacctattt---------gaaacttaaaggactaactaggaaatcatgtcaaactaaaaggacata 3088156  T
Q  120 attgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||||||||||||| |||||  | ||| |||  | || ||||||||||||||||| ||||    
T  3088157 attgaaactttcgaaatttaaagcattaacttgaaaattctgtcaaactaaaaggaccaaaa 3088218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 21376732 - 21376565
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||| |||||||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||  || ||  |||||| |||||||||||     
T  21376732 gacagcagtggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggaccaacctgaaaattctatcaaactaaaag 21376633  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
     || ||||| |||||||  ||| ||||||  |||| ||   ||||  |||||| ||||||||||||||    
T  21376632 aacttaattaaaacttttaaaatttaaaagtctaacttaaaagttcagtcaaattaaaaggactaaaa 21376565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 14964749 - 14964648
Alignment:
Q  73 aaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 172  Q
    ||||| ||| |||| | ||| ||||||||||||||||||| ||| |||||||||||||| |||||| ||| ||||| |||||| ||| || |||||||||    
T  14964749 aaactaaaaggacttatttgagaattctgtcaaactaaaaagacataattgaaactttcaaaactt-aaagactaacttgggaattaagttaaactaaaa 14964651  T
Q  173 gga 175  Q
    |||    
T  14964650 gga 14964648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 19153974 - 19153885
Alignment:
Q  25 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttg-ggaattctgtcaaactaaaa 112  Q
    ||||| |||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||| |||||   ||||||||||||||||||    
T  19153974 gtaacagtgaaataatttatcaactaaaaagacatatttgaaacatttgaaacttaaataactaacttgacaaattctgtcaaactaaaa 19153885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 54456764 - 54456679
Alignment:
Q  28 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||| ||||||||||| ||||| ||| |||||||||| || ||||||||||||||| | || | ||||||||||||||||||    
T  54456764 acggtgaattagtttatcaactaaaatgacatatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaa 54456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 54456799 - 54456912
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||||||||||||| |||| |||||| |||| ||||||| ||||| |||||| |||||||||| || ||||||   | ||| |||| ||||     
T  54456799 tttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacctatttgaaacttttgatacttaagggaataatttggaagttc 54456898  T
Q  160 tgtcaaactaaaag 173  Q
    | ||||||||||||    
T  54456899 tatcaaactaaaag 54456912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 54456746 - 54456651
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgacctaaaat 199  Q
    |||||||||||| || |||||||||||||||||||||  ||||| || | | || |||||||||||||||| | |||||||| |||||||| ||||    
T  54456746 aactaaaatgacatatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaaggatcaaaaatgatatttgaccttaaat 54456651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 31247292 - 31247195
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| |||| ||||| || |||||||||||||| ||| || || |||||||||| ||||||||||||| |||| ||||| ||||| |||||||||||||    
T  31247292 gacagcaggagtaacagtaaaatagtttatcaactaataggacttatttgaaacttttgaaacttaaa-gactaacttgagaattttgtcaaactaaaa 31247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 14629382 - 14629288
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||         ||||| |||| ||||||||||||||||||| |||||     
T  14629382 gacaacaggggtaacggtgaaataatttatcaactaaaagaacctatttgaaac---------ttaaaggactaacttgggaattctgtcaaagtaaaag 14629292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 21410273 - 21410355
Alignment:
Q  24 ggtaacggtgaaatagtttatcaattaaaa-gaccta-tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaa 105  Q
    |||||| ||||||||||||||||| ||||| ||| || ||| |||| |||||||||||||||| |||||| |||||||||||||    
T  21410273 ggtaacagtgaaatagtttatcaactaaaatgacataatttaaaacttttgaaacttaaatgattgactt-ggaattctgtcaa 21410355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 24707558 - 24707475
Alignment:
Q  30 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||||||||||||||||| ||||| ||  ||||| |||| ||  ||||||||| |||| |||||| |||||||| |||||||||    
T  24707558 ggtgaaatagtttatcaactaaaatgatatatttaaaactttgaaaacttaaaggactaacttggaaattctgtaaaactaaaa 24707475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 5505741 - 5505822
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaact 137  Q
    |||||| |||| ||||||||||||| | ||| | || | |||| |||||||| |||| || |||||||||||||||||||||    
T  5505741 ctatttaaaacttttgaaacttaaaaggactaattttgaaattatgtcaaacaaaaaggatctaattgaaactttcgaaact 5505822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 5505692 - 5505800
Alignment:
Q  69 tttgaaacttaaatgactgacttgggaattctgtcaaa-ctaaaatgacctaattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaa 166  Q
    ||||||||||||| |||| |||| | |||||||| ||| |||||| || ||| || ||||||| |||||||||||  ||||| || | | ||||||||||    
T  5505692 tttgaaacttaaaggactaacttagaaattctgttaaaactaaaaggatctatttaaaacttttgaaacttaaaaggactaattttgaaattatgtcaaa 5505791  T
Q  167 ctaaaagga 175  Q
    | |||||||    
T  5505792 caaaaagga 5505800  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 54456844 - 54456940
Alignment:
Q  46 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 141  Q
    ||||||||| ||||||||||||| ||||| ||||||  || | | |||| | |||| |||||||||||  | ||||||||| ||||| |||||||||    
T  54456844 aattaaaaggacctatttgaaacttttgatacttaagggaataatttggaagttctatcaaactaaaagaatctaattgaagctttctaaacttaaa 54456940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 28705 - 28548
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||  ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  28705 caggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaaggacct 28606  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||| |||||||||  ||||| |||| | || ||||||| |||||||||    
T  28605 aattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggac 28548  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 28619 - 28547
Alignment:
Q  46 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    ||||||||| ||||| ||||||| ||  ||||||||| |||| |||||| |||||||||||| ||||| ||||    
T  28619 aattaaaaggacctaattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggacc 28547  T

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Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 124351 - 124482
Alignment:
Q  50 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaa 149  Q
    |||||||||| ||||||| || |||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||  |||||     
T  124351 aaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaac 124450  T
Q  150 ttgggagttatgtcaaactaaaaggactaaaa 181  Q
    |||||| |||| |||||| |||||||| ||||    
T  124451 ttgggaattatatcaaacaaaaaggaccaaaa 124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 124329 - 124417
Alignment:
Q  88 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| |||| | || |||||||||||||||||    
T  124329 acttgggaattctgtcaaactaaaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 124417  T

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Target: scaffold0019; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 124262 - 124142
Alignment:
Q  60 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 159  Q
    |||||||| ||||||||||||| |||| | |||||||||||||||||||||||  ||||  |||||||||| ||||||||||  ||||| |||||| ||     
T  124262 tttgaaacttttgaaacttaaa-gactaaattgggaattctgtcaaactaaaagcacctgtttgaaacttttgaaacttaaaggactaacttgggaattt 124164  T
Q  160 tgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||||| ||||    
T  124163 tgtcaaactaaaaggaccaaaa 124142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 124208 - 124146
Alignment:
Q  55 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||| |||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| ||||    
T  124208 acctgtttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacc 124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 498 - 620
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  498 caggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacct 597  T
Q  119 aattgaaactttcgaaacttaaa 141  Q
    ||||||||||||| |||||||||    
T  598 aattgaaactttcaaaacttaaa 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 186 - 25
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 113  Q
    |||| |||| ||||| ||||||||||||||||| ||||| ||| |||||||||| ||| |||||||||| ||| |||| ||||||| ||||||||||||     
T  186 gacaacaggagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttcaaacttaaat-actaacttaggaattcggtcaaactaaaag 88  T
Q  114 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||  || || ||||||| ||||||| ||  ||||| ||| || ||||||||||||||||||||    
T  87 gatatatttaaaacttttgaaacttgaaggactaacttgagaattatgtcaaactaaaaggac 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 524 - 595
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||||| |||||||||| |||| |||||  ||||| ||| || || ||||||| |||||||||    
T  524 aactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggac 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 45204 - 45341
Alignment:
Q  57 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 156  Q
    ||||||||||| ||| |||||||||||||| | |||  |||| ||||||||||||| |||||||||||||||||  |||||||||| ||||| ||| ||     
T  45204 ctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaa 45303  T
Q  157 ttatgtcaaactaaaaggactaaaatgatttttgacct 194  Q
    ||||||||||| |||||||| ||| || | ||||||||    
T  45304 ttatgtcaaaccaaaaggaccaaagtggtatttgacct 45341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 45181 - 45263
Alignment:
Q  94 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 176  Q
    ||||||||||||| ||||| || ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  45181 gaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggac 45263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 9546 - 9377
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 118  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||         |||||  ||| ||||| ||||||| | ||||||||| |||||    
T  9546 caggggtaacagtgaaatagtttatcaactaaaaggacctatttgaaac---------ttaaagaactaacttgagaattctattaaactaaaaggacct 9456  T
Q  119 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac-taaaatgatttttgacctaa 196  Q
    ||||||||||| |||||||||||  ||||| ||  || || |||||||||||||||||  |||||||| ||||||||||    
T  9455 aattgaaacttccgaaacttaaatgactaacttaagaattctgtcaaactaaaaggacgaaaaatgatatttgacctaa 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 9891 - 9993
Alignment:
Q  74 aacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 173  Q
    |||| ||| |||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||  ||||| ||| || || ||||||||||||||    
T  9891 aactaaaaggactaacttgggaattatgtcaaactaaaaggaactaattgaaactttcgaaacttaaagaactaacttgagaattctgtcaaactaaaag 9990  T
Q  174 gac 176  Q
    |||    
T  9991 gac 9993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 16274 - 16176
Alignment:
Q  20 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 117  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||| |||| | |||| |||| | ||||||||||| ||||    
T  16274 caggggtaacggtgaaatagtttatcaactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggacc 16176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 16565 - 16663
Alignment:
Q  15 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 112  Q
    |||| ||||| |||| ||||||||||||||||| ||||| ||| ||||| |||| ||| ||||||||| || | |||||| |||| | |||||| ||||    
T  16565 gacaacagggataactgtgaaatagtttatcaactaaaatgacttatttaaaactttttaaacttaaaggattaacttggaaattttatcaaacaaaaa 16663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 16248 - 16172
Alignment:
Q  105 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 181  Q
    ||||||||||||||| || |||||||  |||||||||  ||||| |||| | || | ||||||||||||||| ||||    
T  16248 aactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggaccaaaa 16172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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