View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7345_high_7 (Length: 250)
Name: NF7345_high_7
Description: NF7345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7345_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 46 - 237
Target Start/End: Complemental strand, 15636843 - 15636651
Alignment:
| Q |
46 |
agcactttaatgaatagtccttcttccactacattattgtccctgctttcataccttcatattccctttaacatttgtacttgtttccttttgttaacaa |
145 |
Q |
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| T |
15636843 |
agcactttaatgaatagtccttcttccactacattattgtccctgctttcataccttcatattccctttaacatttgtacttgtttctttttgttaacaa |
15636744 |
T |
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| Q |
146 |
tgtttggcctaggataacgtttcattccctataggagcagcca-nnnnnnnnaattacatttataatataatatggagttagggttagtatat |
237 |
Q |
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| T |
15636743 |
tgtttggcctaggataacgtttcattccctataggagcagccatttttttttaattacatttataatatgataaggagttagggttagtatat |
15636651 |
T |
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