View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7345_high_9 (Length: 239)
Name: NF7345_high_9
Description: NF7345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7345_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 44032802 - 44032588
Alignment:
| Q |
1 |
aaattgacaacccacctgtgtttttgacatgacagaaacttaagcaatatatgccagcctctgcctgnnnnnnnnnctttcttcacagcgaatctagtcg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
44032802 |
aaattgacaacccacctgtgtttttgacatgacagaaacttaagcaatatatgccagcctctgcctgtttttttttctttcttcacagcgaatctagtcg |
44032703 |
T |
|
| Q |
101 |
gtaagaggagttgtgttcatccaatcttataacaagtagcaatttttaattaatgtgggattcgcaccatgttaaaataaaatgccaaattccgaaagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44032702 |
gtaagaggagttgtgttcatccaatcttataacaagtagcaatttttaattaatgtgggattcgcaccatgttaaaataaaatgccaaattccgaaagtt |
44032603 |
T |
|
| Q |
201 |
gaattgaaaggtgag |
215 |
Q |
| |
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||||||||||||||| |
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| T |
44032602 |
gaattgaaaggtgag |
44032588 |
T |
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