View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7345_low_12 (Length: 220)

Name: NF7345_low_12
Description: NF7345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7345_low_12
NF7345_low_12
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-220)||(99076-99293)
scaffold0035 (22-220)||(19359-19560)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-220)||(9178-9397)
[»] chr6 (47 HSPs)
chr6 (1-219)||(21618268-21618487)
chr6 (5-220)||(16336150-16336366)
chr6 (1-220)||(22076313-22076533)
chr6 (25-220)||(12349016-12349211)
chr6 (1-219)||(19832938-19833158)
chr6 (1-219)||(15954727-15954946)
chr6 (1-219)||(16877237-16877456)
chr6 (69-220)||(12423284-12423435)
chr6 (1-219)||(20487823-20488043)
chr6 (1-219)||(19065933-19066143)
chr6 (1-220)||(33351835-33352052)
chr6 (3-219)||(32544289-32544508)
chr6 (11-219)||(9717867-9718078)
chr6 (1-219)||(22802165-22802384)
chr6 (1-219)||(20730610-20730829)
chr6 (1-219)||(18435580-18435801)
chr6 (11-220)||(21625124-21625333)
chr6 (5-220)||(12715329-12715546)
chr6 (1-219)||(26972132-26972351)
chr6 (1-219)||(29918041-29918259)
chr6 (22-219)||(15531549-15531749)
chr6 (58-220)||(15302223-15302386)
chr6 (30-219)||(19688790-19688980)
chr6 (11-219)||(13435556-13435767)
chr6 (30-219)||(14100373-14100565)
chr6 (1-219)||(16265056-16265275)
chr6 (155-220)||(19482775-19482840)
chr6 (11-216)||(23284591-23284799)
chr6 (11-164)||(25597558-25597714)
chr6 (1-220)||(20112603-20112826)
chr6 (11-220)||(13602195-13602407)
chr6 (155-220)||(17316586-17316651)
chr6 (135-220)||(24116851-24116936)
chr6 (126-220)||(18378337-18378431)
chr6 (1-82)||(139274-139355)
chr6 (1-82)||(147295-147376)
chr6 (1-220)||(19086181-19086392)
chr6 (152-220)||(15987256-15987324)
chr6 (152-219)||(21235149-21235216)
chr6 (169-219)||(17381545-17381595)
chr6 (1-101)||(21235256-21235356)
chr6 (144-219)||(26943600-26943675)
chr6 (172-219)||(26589623-26589671)
chr6 (22-220)||(19624002-19624203)
chr6 (1-101)||(17608229-17608331)
chr6 (156-219)||(25594092-25594155)
chr6 (22-98)||(24116974-24117053)
[»] chr8 (60 HSPs)
chr8 (1-220)||(22673793-22674013)
chr8 (1-219)||(36105211-36105430)
chr8 (1-216)||(22663135-22663351)
chr8 (1-220)||(40845304-40845523)
chr8 (1-219)||(15336004-15336223)
chr8 (1-219)||(15425069-15425288)
chr8 (1-219)||(15516373-15516592)
chr8 (1-219)||(24551290-24551509)
chr8 (1-220)||(6407741-6407951)
chr8 (1-220)||(14989376-14989587)
chr8 (1-219)||(23185142-23185361)
chr8 (1-219)||(9320584-9320805)
chr8 (1-219)||(1237653-1237872)
chr8 (1-219)||(45538355-45538574)
chr8 (14-220)||(16207321-16207530)
chr8 (1-219)||(17797438-17797657)
chr8 (11-220)||(39693550-39693762)
chr8 (1-220)||(18151581-18151782)
chr8 (1-220)||(19156211-19156433)
chr8 (1-219)||(21301038-21301248)
chr8 (1-219)||(24832972-24833192)
chr8 (1-220)||(12757677-12757899)
chr8 (1-103)||(3598262-3598364)
chr8 (22-220)||(16188999-16189200)
chr8 (11-220)||(43639798-43639999)
chr8 (22-219)||(33082873-33083073)
chr8 (1-219)||(13430552-13430763)
chr8 (11-219)||(30421354-30421564)
chr8 (11-220)||(17441732-17441943)
chr8 (11-220)||(17914474-17914686)
chr8 (1-220)||(602634-602856)
chr8 (1-219)||(21932899-21933120)
chr8 (11-211)||(18121033-18121236)
chr8 (22-220)||(16681238-16681439)
chr8 (11-219)||(19943251-19943464)
chr8 (1-219)||(21288419-21288629)
chr8 (9-220)||(24646353-24646567)
chr8 (11-216)||(29693334-29693542)
chr8 (155-219)||(33560295-33560359)
chr8 (121-220)||(18679830-18679929)
chr8 (132-219)||(23263660-23263747)
chr8 (39-219)||(45567854-45568036)
chr8 (126-220)||(18719016-18719110)
chr8 (22-220)||(17525663-17525865)
chr8 (22-220)||(20382329-20382530)
chr8 (12-219)||(17701761-17701971)
chr8 (126-220)||(18722688-18722782)
chr8 (126-220)||(18731033-18731127)
chr8 (11-101)||(22745622-22745714)
chr8 (58-173)||(20255538-20255654)
chr8 (134-220)||(17267489-17267575)
chr8 (126-220)||(18685439-18685533)
chr8 (155-219)||(1745175-1745240)
chr8 (11-216)||(18321083-18321291)
chr8 (138-195)||(21540984-21541041)
chr8 (152-219)||(43644912-43644979)
chr8 (185-219)||(45292842-45292876)
chr8 (174-217)||(2810840-2810882)
chr8 (152-219)||(19707522-19707589)
chr8 (176-220)||(25164085-25164129)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-219)||(3328-3547)
[»] chr1 (55 HSPs)
chr1 (1-220)||(48570070-48570289)
chr1 (1-220)||(44821383-44821603)
chr1 (1-219)||(25448402-25448623)
chr1 (1-220)||(21702836-21703055)
chr1 (25-220)||(30572219-30572414)
chr1 (1-219)||(35040189-35040408)
chr1 (25-220)||(46089011-46089198)
chr1 (1-216)||(10251012-10251218)
chr1 (1-219)||(2327277-2327497)
chr1 (11-220)||(22600028-22600240)
chr1 (1-219)||(22427195-22427414)
chr1 (14-218)||(2834714-2834919)
chr1 (1-220)||(32785774-32785995)
chr1 (11-219)||(29215820-29216029)
chr1 (1-220)||(28492240-28492462)
chr1 (11-219)||(1900368-1900579)
chr1 (1-219)||(39200830-39201049)
chr1 (11-219)||(35401832-35402041)
chr1 (1-219)||(22464646-22464866)
chr1 (1-219)||(42284651-42284860)
chr1 (11-220)||(20954319-20954531)
chr1 (1-219)||(21120910-21121121)
chr1 (155-219)||(21984619-21984683)
chr1 (21-219)||(22153880-22154081)
chr1 (22-220)||(33256208-33256409)
chr1 (22-220)||(33276380-33276581)
chr1 (11-220)||(38282589-38282800)
chr1 (155-219)||(21135153-21135217)
chr1 (1-219)||(21204769-21204980)
chr1 (25-219)||(7744952-7745147)
chr1 (5-219)||(16235138-16235353)
chr1 (108-219)||(36134213-36134323)
chr1 (40-219)||(2267112-2267292)
chr1 (108-220)||(22201682-22201794)
chr1 (155-219)||(37642271-37642335)
chr1 (128-219)||(14263417-14263508)
chr1 (126-220)||(12284445-12284539)
chr1 (54-220)||(23024810-23024966)
chr1 (11-219)||(23036375-23036584)
chr1 (11-219)||(7309842-7310052)
chr1 (58-219)||(19717547-19717709)
chr1 (58-219)||(2268554-2268713)
chr1 (2-220)||(10757443-10757663)
chr1 (108-220)||(1577889-1578001)
chr1 (11-216)||(48704230-48704436)
chr1 (155-220)||(19215634-19215699)
chr1 (143-219)||(21191846-21191922)
chr1 (126-219)||(17024928-17025021)
chr1 (134-220)||(30893114-30893200)
chr1 (155-219)||(12613807-12613871)
chr1 (155-219)||(34255509-34255573)
chr1 (1-97)||(26701965-26702063)
chr1 (5-100)||(37642382-37642477)
chr1 (1-35)||(21029003-21029037)
chr1 (1-65)||(21135006-21135070)
[»] chr5 (46 HSPs)
chr5 (1-220)||(29138306-29138524)
chr5 (1-219)||(15516989-15517208)
chr5 (1-219)||(26759169-26759388)
chr5 (1-220)||(3245340-3245559)
chr5 (1-219)||(30743000-30743219)
chr5 (1-219)||(4887042-4887261)
chr5 (1-219)||(11993908-11994127)
chr5 (1-220)||(28464247-28464457)
chr5 (1-219)||(42243700-42243920)
chr5 (11-220)||(9088988-9089188)
chr5 (63-218)||(26765519-26765674)
chr5 (1-219)||(33022684-33022903)
chr5 (1-220)||(41566330-41566552)
chr5 (25-220)||(25930087-25930274)
chr5 (1-219)||(33933287-33933510)
chr5 (91-220)||(28139626-28139755)
chr5 (1-215)||(14086435-14086652)
chr5 (1-220)||(10848792-10849003)
chr5 (30-219)||(31117897-31118088)
chr5 (1-219)||(35986139-35986349)
chr5 (22-220)||(89339-89540)
chr5 (120-220)||(30115855-30115955)
chr5 (25-219)||(35931936-35932123)
chr5 (1-220)||(6512329-6512546)
chr5 (1-219)||(26784374-26784595)
chr5 (1-219)||(32160786-32161006)
chr5 (22-220)||(21910575-21910776)
chr5 (126-219)||(7745717-7745810)
chr5 (1-220)||(23412872-23413092)
chr5 (58-220)||(17814987-17815150)
chr5 (126-220)||(21072264-21072358)
chr5 (126-217)||(13545536-13545627)
chr5 (25-219)||(21660232-21660418)
chr5 (126-219)||(20550915-20551007)
chr5 (155-220)||(23391656-23391721)
chr5 (126-220)||(19536325-19536419)
chr5 (1-80)||(5430044-5430123)
chr5 (1-80)||(30115774-30115853)
chr5 (152-220)||(642757-642825)
chr5 (127-219)||(11208011-11208102)
chr5 (4-49)||(9398644-9398689)
chr5 (176-220)||(6499258-6499302)
chr5 (152-220)||(9398784-9398852)
chr5 (176-220)||(12352869-12352913)
chr5 (11-51)||(21072147-21072187)
chr5 (152-220)||(23881086-23881154)
[»] chr4 (60 HSPs)
chr4 (1-220)||(6517502-6517722)
chr4 (1-219)||(10692869-10693088)
chr4 (1-219)||(10906635-10906854)
chr4 (1-219)||(17398558-17398767)
chr4 (11-219)||(54679948-54680155)
chr4 (30-220)||(3105323-3105513)
chr4 (70-220)||(16940033-16940183)
chr4 (1-218)||(413021-413239)
chr4 (1-219)||(3483739-3483960)
chr4 (54-219)||(29121388-29121554)
chr4 (1-220)||(19884719-19884940)
chr4 (22-219)||(37435428-37435628)
chr4 (69-219)||(25651046-25651197)
chr4 (1-218)||(17247263-17247480)
chr4 (58-220)||(9140929-9141092)
chr4 (11-219)||(13575998-13576207)
chr4 (1-220)||(3395607-3395829)
chr4 (1-219)||(8105655-8105876)
chr4 (19-216)||(14904246-14904446)
chr4 (11-219)||(22675404-22675613)
chr4 (1-219)||(22190864-22191075)
chr4 (11-220)||(45833411-45833623)
chr4 (14-181)||(55731836-55732003)
chr4 (25-216)||(15475050-15475233)
chr4 (58-220)||(12601118-12601281)
chr4 (11-213)||(29680426-29680631)
chr4 (11-184)||(14833449-14833625)
chr4 (11-219)||(19911762-19911974)
chr4 (108-220)||(37985594-37985706)
chr4 (57-219)||(56532990-56533155)
chr4 (1-101)||(14571161-14571261)
chr4 (155-219)||(40860685-40860749)
chr4 (126-220)||(19621061-19621155)
chr4 (126-220)||(55380307-55380401)
chr4 (1-194)||(56034617-56034811)
chr4 (22-219)||(16632458-16632658)
chr4 (155-220)||(20977474-20977539)
chr4 (155-219)||(9751569-9751633)
chr4 (155-219)||(38513896-38513960)
chr4 (13-220)||(10072952-10073161)
chr4 (21-220)||(12811070-12811269)
chr4 (155-220)||(27188667-27188732)
chr4 (1-101)||(16853620-16853720)
chr4 (155-219)||(39419764-39419827)
chr4 (156-219)||(3499682-3499745)
chr4 (108-220)||(19666389-19666501)
chr4 (58-219)||(14604837-14605000)
chr4 (1-74)||(3793287-3793360)
chr4 (155-219)||(16853521-16853585)
chr4 (166-219)||(1672407-1672460)
chr4 (166-219)||(1674882-1674935)
chr4 (143-219)||(6641702-6641778)
chr4 (155-220)||(40846116-40846181)
chr4 (11-72)||(23123597-23123660)
chr4 (1-91)||(3499537-3499624)
chr4 (126-217)||(11915720-11915811)
chr4 (155-217)||(14154022-14154085)
chr4 (1-35)||(14153876-14153910)
chr4 (1-96)||(17700685-17700777)
chr4 (1-41)||(29121556-29121596)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-220)||(60826-61046)
[»] chr2 (56 HSPs)
chr2 (1-220)||(34321799-34322019)
chr2 (1-220)||(33074243-33074463)
chr2 (1-220)||(35743865-35744083)
chr2 (1-220)||(28550791-28551001)
chr2 (1-219)||(28711560-28711780)
chr2 (4-220)||(1586908-1587116)
chr2 (40-219)||(22802478-22802658)
chr2 (1-219)||(31327828-31328048)
chr2 (1-219)||(31334549-31334769)
chr2 (30-220)||(22776190-22776371)
chr2 (30-220)||(22781568-22781749)
chr2 (1-219)||(6392651-6392872)
chr2 (1-219)||(45087045-45087266)
chr2 (1-220)||(22785528-22785738)
chr2 (25-220)||(31967940-31968126)
chr2 (1-219)||(40332105-40332315)
chr2 (4-216)||(28701094-28701308)
chr2 (30-220)||(44840451-44840631)
chr2 (4-219)||(20151900-20152117)
chr2 (1-220)||(3277047-3277258)
chr2 (1-219)||(6573985-6574206)
chr2 (11-220)||(23235024-23235236)
chr2 (1-220)||(31800750-31800970)
chr2 (72-220)||(14581532-14581671)
chr2 (11-220)||(22187973-22188185)
chr2 (1-219)||(30557182-30557403)
chr2 (11-220)||(30667006-30667218)
chr2 (22-220)||(20568632-20568833)
chr2 (22-220)||(25829151-25829352)
chr2 (11-219)||(38781417-38781626)
chr2 (1-220)||(13963839-13964061)
chr2 (5-220)||(18376771-18376989)
chr2 (11-220)||(25037130-25037342)
chr2 (11-220)||(25041237-25041449)
chr2 (1-219)||(22317611-22317833)
chr2 (5-220)||(24377118-24377336)
chr2 (11-220)||(30621233-30621445)
chr2 (11-220)||(30623854-30624066)
chr2 (22-220)||(19540433-19540634)
chr2 (21-211)||(22260432-22260625)
chr2 (126-220)||(40782494-40782588)
chr2 (11-220)||(21537119-21537331)
chr2 (11-220)||(9015242-9015451)
chr2 (126-220)||(10009739-10009833)
chr2 (22-219)||(24576053-24576254)
chr2 (126-219)||(24850655-24850748)
chr2 (11-103)||(1084142-1084235)
chr2 (126-220)||(24779360-24779454)
chr2 (126-220)||(28140608-28140702)
chr2 (155-219)||(23392686-23392750)
chr2 (22-98)||(10009631-10009709)
chr2 (176-219)||(39037681-39037724)
chr2 (152-194)||(1084049-1084091)
chr2 (152-216)||(22455005-22455069)
chr2 (152-220)||(26619116-26619184)
chr2 (1-37)||(39037503-39037539)
[»] chr7 (71 HSPs)
chr7 (11-219)||(2265448-2265657)
chr7 (28-202)||(15704445-15704620)
chr7 (1-219)||(35952606-35952826)
chr7 (30-219)||(14426567-14426757)
chr7 (1-219)||(4821494-4821712)
chr7 (1-220)||(8182949-8183168)
chr7 (1-219)||(12174259-12174479)
chr7 (5-213)||(16542943-16543152)
chr7 (5-213)||(16622510-16622719)
chr7 (1-220)||(48062748-48062959)
chr7 (1-219)||(48236821-48237040)
chr7 (30-219)||(30944271-30944461)
chr7 (30-219)||(30945304-30945494)
chr7 (11-219)||(33605705-33605915)
chr7 (26-220)||(14425466-14425651)
chr7 (1-220)||(16111803-16112023)
chr7 (1-219)||(19339178-19339388)
chr7 (1-220)||(23279876-23280097)
chr7 (1-219)||(27871738-27871949)
chr7 (1-220)||(2913525-2913747)
chr7 (1-219)||(44467084-44467306)
chr7 (11-219)||(9709731-9709940)
chr7 (22-219)||(21283311-21283511)
chr7 (72-220)||(1293049-1293188)
chr7 (1-220)||(15088539-15088761)
chr7 (1-219)||(28622275-28622494)
chr7 (11-220)||(19710940-19711152)
chr7 (11-219)||(10883100-10883311)
chr7 (4-219)||(9069582-9069800)
chr7 (1-219)||(33691629-33691850)
chr7 (11-220)||(13880123-13880335)
chr7 (1-216)||(21695424-21695642)
chr7 (19-220)||(13302829-13303033)
chr7 (25-216)||(32264669-32264853)
chr7 (11-216)||(15467939-15468147)
chr7 (126-220)||(29935403-29935497)
chr7 (1-218)||(2500059-2500279)
chr7 (40-219)||(24794681-24794853)
chr7 (16-220)||(13137827-13138034)
chr7 (22-220)||(16316495-16316696)
chr7 (22-219)||(22577959-22578159)
chr7 (1-219)||(21381356-21381567)
chr7 (58-220)||(13648748-13648911)
chr7 (60-219)||(19237022-19237181)
chr7 (65-219)||(28409059-28409214)
chr7 (1-216)||(30025928-30026146)
chr7 (5-219)||(331665-331881)
chr7 (26-219)||(12366690-12366886)
chr7 (126-219)||(14193134-14193227)
chr7 (135-220)||(16309961-16310046)
chr7 (126-220)||(5000867-5000961)
chr7 (11-220)||(11319424-11319636)
chr7 (126-219)||(21692307-21692400)
chr7 (126-219)||(24788161-24788254)
chr7 (155-219)||(48805953-48806017)
chr7 (126-220)||(11792926-11793020)
chr7 (126-216)||(13730720-13730810)
chr7 (108-198)||(16556665-16556755)
chr7 (108-198)||(16608907-16608997)
chr7 (29-101)||(7339821-7339893)
chr7 (152-219)||(39284635-39284702)
chr7 (155-220)||(13260689-13260754)
chr7 (155-219)||(4412036-4412100)
chr7 (176-220)||(13018600-13018644)
chr7 (1-49)||(39284482-39284530)
chr7 (156-219)||(41842348-41842411)
chr7 (156-218)||(13692372-13692434)
chr7 (1-125)||(4411890-4412015)
chr7 (1-102)||(4429006-4429107)
chr7 (11-101)||(11793046-11793138)
chr7 (176-220)||(13032167-13032211)
[»] chr3 (70 HSPs)
chr3 (1-219)||(14955450-14955669)
chr3 (1-220)||(21640889-21641108)
chr3 (1-219)||(2785087-2785307)
chr3 (4-219)||(24775452-24775670)
chr3 (30-219)||(5213600-5213789)
chr3 (11-219)||(20627358-20627567)
chr3 (4-219)||(53056647-53056863)
chr3 (1-219)||(21636596-21636806)
chr3 (1-220)||(46796294-46796504)
chr3 (1-220)||(11223585-11223805)
chr3 (1-219)||(33583252-33583473)
chr3 (1-220)||(14969349-14969571)
chr3 (11-219)||(47207729-47207939)
chr3 (25-220)||(49666356-49666542)
chr3 (1-220)||(21605580-21605791)
chr3 (1-218)||(46349761-46349979)
chr3 (1-219)||(40850991-40851201)
chr3 (1-219)||(28582129-28582350)
chr3 (14-220)||(49642690-49642899)
chr3 (40-219)||(22140787-22140967)
chr3 (1-219)||(29855432-29855652)
chr3 (11-219)||(40799897-40800106)
chr3 (11-219)||(47405348-47405557)
chr3 (1-219)||(30054143-30054353)
chr3 (1-219)||(2561211-2561432)
chr3 (1-219)||(18121537-18121758)
chr3 (11-216)||(13948362-13948570)
chr3 (11-219)||(20646177-20646389)
chr3 (22-220)||(37467355-37467556)
chr3 (63-220)||(41495021-41495179)
chr3 (1-180)||(11869130-11869310)
chr3 (1-220)||(12963002-12963222)
chr3 (11-219)||(16658543-16658754)
chr3 (11-219)||(38177568-38177779)
chr3 (58-219)||(13824092-13824254)
chr3 (22-219)||(49553425-49553625)
chr3 (11-220)||(15903220-15903433)
chr3 (22-219)||(12726166-12726366)
chr3 (30-219)||(18142696-18142888)
chr3 (126-220)||(13780627-13780721)
chr3 (11-219)||(6090755-6090966)
chr3 (128-220)||(14393049-14393141)
chr3 (128-219)||(16032548-16032639)
chr3 (9-220)||(29951361-29951575)
chr3 (9-220)||(30000515-30000729)
chr3 (155-220)||(9700108-9700173)
chr3 (138-219)||(11909079-11909160)
chr3 (11-219)||(52920429-52920639)
chr3 (138-209)||(45858804-45858875)
chr3 (22-220)||(17238858-17239059)
chr3 (155-220)||(1728087-1728152)
chr3 (126-219)||(25398298-25398391)
chr3 (126-220)||(19888988-19889082)
chr3 (11-220)||(31303408-31303620)
chr3 (175-219)||(50300246-50300290)
chr3 (1-80)||(33598014-33598093)
chr3 (173-219)||(11868292-11868338)
chr3 (2-103)||(12752544-12752646)
chr3 (126-220)||(22804066-22804160)
chr3 (152-219)||(12388941-12389008)
chr3 (152-195)||(51341050-51341093)
chr3 (152-220)||(23538235-23538303)
chr3 (1-96)||(1727942-1728037)
chr3 (143-218)||(19249472-19249547)
chr3 (10-96)||(45858673-45858760)
chr3 (152-194)||(12752697-12752739)
chr3 (39-103)||(11908977-11909042)
chr3 (155-220)||(37412627-37412692)
chr3 (11-103)||(51341143-51341236)
chr3 (1-45)||(512493-512537)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-220)||(7024-7244)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-219)||(6608-6827)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-220)||(21999-22219)
scaffold0217 (1-220)||(9583-9802)
scaffold0217 (1-219)||(19055-19276)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-219)||(78234-78453)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-219)||(215365-215584)
[»] scaffold0004 (5 HSPs)
scaffold0004 (30-219)||(211422-211612)
scaffold0004 (11-220)||(377435-377647)
scaffold0004 (155-219)||(220262-220326)
scaffold0004 (11-51)||(220432-220472)
scaffold0004 (143-219)||(244295-244371)
[»] scaffold0527 (2 HSPs)
scaffold0527 (25-212)||(7963-8150)
scaffold0527 (25-101)||(11-87)
[»] scaffold1359 (2 HSPs)
scaffold1359 (30-219)||(552-742)
scaffold1359 (26-220)||(1658-1843)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-188)||(65297-65484)
scaffold0011 (1-188)||(144342-144529)
scaffold0011 (12-219)||(164824-165033)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-219)||(5467-5689)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-219)||(22700-22921)
[»] scaffold1331 (1 HSPs)
scaffold1331 (40-219)||(1606-1786)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-220)||(17643-17853)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-219)||(7727-7948)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-219)||(34681-34891)
scaffold0056 (25-219)||(25566-25752)
[»] scaffold0084 (3 HSPs)
scaffold0084 (11-220)||(49355-49567)
scaffold0084 (5-220)||(32508-32726)
scaffold0084 (1-219)||(212-432)
[»] scaffold0473 (2 HSPs)
scaffold0473 (1-141)||(2580-2720)
scaffold0473 (179-219)||(2738-2778)
[»] scaffold0280 (1 HSPs)
scaffold0280 (108-220)||(2707-2818)
[»] scaffold0247 (2 HSPs)
scaffold0247 (117-220)||(25384-25487)
scaffold0247 (1-121)||(23431-23551)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-215)||(89923-90138)
[»] scaffold0026 (2 HSPs)
scaffold0026 (22-220)||(60039-60240)
scaffold0026 (22-220)||(7949-8150)
[»] scaffold0771 (1 HSPs)
scaffold0771 (11-216)||(502-710)
[»] scaffold0083 (2 HSPs)
scaffold0083 (11-220)||(25851-26063)
scaffold0083 (104-210)||(44676-44782)
[»] scaffold0861 (1 HSPs)
scaffold0861 (11-219)||(4823-5034)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-219)||(698-908)
[»] scaffold0290 (1 HSPs)
scaffold0290 (11-220)||(18497-18709)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-219)||(9993-10212)
[»] scaffold0116 (1 HSPs)
scaffold0116 (14-220)||(20850-21059)
[»] scaffold0411 (1 HSPs)
scaffold0411 (11-220)||(12232-12444)
[»] scaffold0210 (1 HSPs)
scaffold0210 (22-219)||(1684-1884)
[»] scaffold0161 (1 HSPs)
scaffold0161 (11-219)||(9983-10195)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-219)||(27297-27516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-185)||(143146-143333)
[»] scaffold0047 (2 HSPs)
scaffold0047 (11-184)||(30283-30459)
scaffold0047 (152-219)||(9927-9994)
[»] scaffold0005 (3 HSPs)
scaffold0005 (11-184)||(6074-6250)
scaffold0005 (1-101)||(246115-246215)
scaffold0005 (58-219)||(212378-212541)
[»] scaffold0120 (2 HSPs)
scaffold0120 (11-219)||(36651-36862)
scaffold0120 (11-219)||(42143-42354)
[»] scaffold0359 (1 HSPs)
scaffold0359 (22-220)||(5577-5778)
[»] scaffold0426 (1 HSPs)
scaffold0426 (108-220)||(13594-13706)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-219)||(87479-87687)
[»] scaffold0337 (1 HSPs)
scaffold0337 (58-219)||(14672-14834)
[»] scaffold0065 (1 HSPs)
scaffold0065 (58-219)||(1714-1876)
[»] scaffold0387 (1 HSPs)
scaffold0387 (155-219)||(7405-7469)
[»] scaffold0132 (2 HSPs)
scaffold0132 (127-219)||(38080-38172)
scaffold0132 (15-103)||(37966-38055)
[»] scaffold0023 (1 HSPs)
scaffold0023 (27-219)||(103596-103791)
[»] scaffold0297 (1 HSPs)
scaffold0297 (11-103)||(17089-17182)
[»] scaffold0220 (1 HSPs)
scaffold0220 (138-219)||(1803-1884)
[»] scaffold0211 (1 HSPs)
scaffold0211 (127-220)||(15617-15710)
[»] scaffold0016 (1 HSPs)
scaffold0016 (155-220)||(747-812)
[»] scaffold0146 (1 HSPs)
scaffold0146 (22-220)||(15140-15341)
[»] scaffold0069 (1 HSPs)
scaffold0069 (11-219)||(5211-5412)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-100)||(39569-39670)
scaffold0022 (1-100)||(137629-137730)
[»] scaffold0364 (1 HSPs)
scaffold0364 (143-219)||(6031-6107)
[»] scaffold0193 (1 HSPs)
scaffold0193 (135-217)||(15819-15902)
[»] scaffold0334 (1 HSPs)
scaffold0334 (129-213)||(9825-9909)
[»] scaffold0908 (1 HSPs)
scaffold0908 (152-219)||(3915-3982)
[»] scaffold0324 (1 HSPs)
scaffold0324 (152-219)||(9980-10047)
[»] scaffold1747 (1 HSPs)
scaffold1747 (152-220)||(1340-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (152-220)||(3-71)
[»] scaffold0530 (1 HSPs)
scaffold0530 (176-220)||(2039-2083)
[»] scaffold0261 (1 HSPs)
scaffold0261 (5-74)||(5809-5880)
[»] scaffold1434 (1 HSPs)
scaffold1434 (22-173)||(673-827)
[»] scaffold0040 (1 HSPs)
scaffold0040 (126-220)||(1515-1609)
[»] scaffold0269 (1 HSPs)
scaffold0269 (159-219)||(7309-7369)
[»] scaffold0064 (1 HSPs)
scaffold0064 (152-220)||(43939-44007)


Alignment Details
Target: scaffold0035 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 99076 - 99293
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  99076 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 99175  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  99176 aagttgcagatgaccggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaa--agcgctgacatagtacgtttgt 99273  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  99274 acgaagtgtacaaccactat 99293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 19359 - 19560
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtagaagattgga 118  Q
    ||||||||||||||||||||||||| ||||  |||||  |||||||||||||||| |||| || ||||| ||  ||| |||| | ||| |||||| | ||    
T  19359 aagatcaccagaagttgtagttcatgaggagatgcaagacttaaagcttcaaaagttgttcaatggatttaatttcgcctaagaattgcagaagactaga 19458  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||| ||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||||| |||  ||||||||||||||||||||||    
T  19459 agagtgaagcaacaactattttgaaaggatttaaaagcattggatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccact 19558  T
Q  219 at 220  Q
    ||    
T  19559 at 19560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9397 - 9178
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |    
T  9397 aagcaagtttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcatcaa 9298  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9297 agattgcagaagattggaaaagtatagcaacgactattttggaaggattagaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 9198  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  9197 acgaagtgtacaaccactat 9178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 8e-88; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21618487 - 21618268
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  21618487 aagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcagaagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcttcta 21618388  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| |||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21618387 aagattgtagaagactggaaaagtaaagcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 21618288  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  21618287 tacgaagtgtacaaccacta 21618268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 16336366 - 16336150
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag- 103  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||| |||||||||||| ||||||| |||||||||||||||||||      
T  16336366 aagtttatcagaagctgagaatcaccagaagttgtagatcatcaggagatgcaacttgaagcttcaaaagttgtttaaaggattcaaactcgtctaaaca 16336267  T
Q  104 ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg 203  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  16336266 ttgcagaagactggaaaagtatagcaacgactattttggaaggattagaaggcattgaatgcttattcttcaaagagcgttgacatagtacgattgtacg 16336167  T
Q  204 aagtgtacaaccactat 220  Q
    |||||||||||||||||    
T  16336166 aagtgtacaaccactat 16336150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22076313 - 22076533
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  22076313 aagcaagttcatcagaagctgtgaatcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaaaggatttaaactcgtcta 22076412  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| | |||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||||||||||| ||||    
T  22076413 aagattgcagaagactcgaaaagtatagcaacgactattttggaaggattggaaagcatttgatgcttattcttcaaagagcgttgacatagtacatttg 22076512  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  22076513 tacgaagtgtacaaccactat 22076533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 12349211 - 12349016
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagta 124  Q
    |||| |||||| || ||||||||||||  ||||||||| ||||||||||||||||| | ||||||||||||||||||  ||| |||||| ||||||||||    
T  12349211 atcatcagaagctgcagttcatcaggagatgcaacttagagcttcaaaagctgtttcaaggattcaaactcgtctaagattgcagaagactggaaaagta 12349112  T
Q  125 tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12349111 tagcaacgactattttgaaaggattgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactat 12349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19832938 - 19833158
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||| ||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  19832938 aagcaagattatcagaagctgagaatcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacggattcaaactcatcta 19833037  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgttt 198  Q
    ||| ||| |||||| |||||||||  |||||||||||||||| |||||||  || ||||||||||||| ||| || ||||||||||||||||||||||||    
T  19833038 aagattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgttt 19833137  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    ||||||||||||||| |||||    
T  19833138 gtacgaagtgtacaagcacta 19833158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 15954946 - 15954727
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  || |||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15954946 aagcaagtttatcagaagctgagaattaccagaagctgtagttcatcaagagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcttcta 15954847  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||| |  ||||||||||| |||| |||||||  ||||||||| |||||| || ||||||||||||||||| ||||||||||    
T  15954846 aagattgcagaagactggaaaaatgaagcaacgactaatttgaaaggatttgaaggcattgaatgcttgttattcaaagagcgttgacaaagtacgtttg 15954747  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  15954746 tacgaagtgtacaaccacta 15954727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16877456 - 16877237
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  16877456 aagcaagttcatcagaagctgtgaatcaccaaaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggattcaaactcgtcta 16877357  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||  |||||  |||||||||||| ||  |||||||  |||| |||||||||| |||| |||||||||||||||| ||||||||||    
T  16877356 aagattgcagaagactgagaaagtgaagcaacgactatcttaaaaggatttgaaggaattggatgctaattcctcaaagagcgttgacaaagtacgtttg 16877257  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  16877256 tacgaagtgtacaaccacta 16877237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 220
Target Start/End: Complemental strand, 12423435 - 12423284
Alignment:
Q  69 caaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgctta 168  Q
    |||||||||||||| ||||||||||||||||||   || |||||| ||||||||||||||||||||||||||| |||||||  ||||||||| |||||||    
T  12423435 caaaagctgtttaatggattcaaactcgtctaagaatgcagaagactggaaaagtatagcaacgactattttgaaaggattggaaggcattgtatgctta 12423336  T
Q  169 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12423335 ttcttcaaagagcgttgacatagtacctttgtacgaagtgtacaaccactat 12423284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20487823 - 20488043
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgga-ttcaaactcgtct 99  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||||    |||||||||| |||||||||| ||||||| ||  ||||| |||||||    
T  20487823 aagcaagtttatcagaagctaaaaatcactagaagttgcagttcatcagaggatgcaacttaaggcttcaaaagttgtttaatggggttcaacctcgtct 20487922  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||| ||| |||||| || ||||||  ||||||| |||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||||||    
T  20487923 aaagattgcagaagactgtaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgttt 20488022  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    ||||||||| |||||||||||    
T  20488023 gtacgaagtttacaaccacta 20488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19065933 - 19066143
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||| | ||||||||||| || ||||||||||||  || | |||||||||||||||||||||| | ||| || |||||| |||    
T  19065933 aagcaagttcatcagaagctgtatatcaccagaagctgcagttcatcaggagatggatcttaaagcttcaaaagctgtttcaaggactctaactcgccta 19066032  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| ||||||||||| |||||| |||||||| || |         |||||||||||||||||||||||||||||||||||||| |||||    
T  19066033 gaaattgcagaagactggaaaagtatggcaacggctattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtatgtttg 19066123  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  19066124 tacgaagtgtacaaccacta 19066143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 33351835 - 33352052
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||  || | |||||| |||  ||||||||||||| ||||||||||||| | ||||||| |||||||||    
T  33351835 aagcaagttcatcagaagctgtgaatcaccagaaactgcatttcatcgggagatgcaacttaaagcctcaaaagctgtttcaaggattcacactcgtcta 33351934  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |   || |||||| |||||||||||||||| | |||||||| |||||||  ||  ||||||||| ||||||||| |||||||||||||||||||||||||    
T  33351935 agagtgcagaagactggaaaagtatagcaa-ggctattttgaaaggattgaaaaacattggatgtttattcttc-aagagcgttgacatagtacgtttgt 33352032  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||| ||||||    
T  33352033 acgaagtgtacaatcactat 33352052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 32544508 - 32544289
Alignment:
Q  3 gcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||| ||||||||||||| ||||||| ||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||||    
T  32544508 gcaagttcatcagaagctgaaaatcaccataagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtcta 32544409  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| ||||| |||  ||||||| |||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| |||||  |||    
T  32544408 agcattgcagaagactggaagagtgaagcaacgtctattttgaaaggatttaaaggcattggatgtttattcttcaaagagcgttgacaaagtacaattg 32544309  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  32544308 tacgaagtgtacaaccacta 32544289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 9718078 - 9717867
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||| | |||||||| ||||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||||||  ||||    
T  9718078 atcagaagttaaagatcactagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacattgt 9717979  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||| ||||||||| |||||||  |||||||| ||||||| |||||||||||||||||||| |||||  |||||||||||    
T  9717978 agaagactggaagagtgaagcaacaactattttgaaaggatttaaaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt 9717879  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  9717878 gtacaaccacta 9717867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 22802384 - 22802165
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||| | |||| || ||||| ||  | |||||    
T  22802384 aagcaagttcatcagaagctgaaaatcaccagaagttgtagttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatattgtcta 22802285  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| ||| || |||||||||  | ||||||| | |||| ||| |||  |||||||||||||||| |||||||||||||||| ||| |||||  |||    
T  22802284 agcattgcagacgactggaaaagtgaaacaacgacaagtttgaaagaatttaaaggcattggatgcttgttcttcaaagagcgttaacaaagtacaattg 22802185  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  22802184 tacgaagtgtacaaccacta 22802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20730610 - 20730829
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| |||||||| ||||| ||||| || ||||||||||||  || |||  ||||||||||| |||||| || ||||| || ||| ||||    
T  20730610 aagcaagttcatcataagctgaaaatcactagaagctgcagttcatcaggagatgtaacaaaaagcttcaaaggctgttcaagggatttaatctcatcta 20730709  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| |||||||||  ||||||||||| |||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||  |||    
T  20730710 agtattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattg 20730809  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||| ||||||||||||||||    
T  20730810 tacaaagtgtacaaccacta 20730829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 18435801 - 18435580
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||| ||||| | |||||||||||||  |||||  ||||||||||  || | | || || ||||| || ||||||    
T  18435801 aagcaagttcatcagaagctgaagatcactagaagctctagttcatcaggagatgcaagacttaaagctttgaaggttattcaatggatttaatctcgtc 18435702  T
Q  99 taa-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||| | ||  | |||| | |||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||       
T  18435701 taagaatttcaaaagactagaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaag 18435602  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||| ||||||||||||||||    
T  18435601 tgtacaaagtgtacaaccacta 18435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 21625333 - 21625124
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||||||||||||||||   |||||||||  |||||  |||| ||||||||| | |||| || ||||| || |||||||||   |||     
T  21625333 atcagaagctgaagatcaccagaagttgtc--tcatcaggagatgcaagacttacagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 21625236  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||||||||| |||| ||||||| |||||| | ||| |||  ||||||||| |||||| |||||||||||||||| ||| |||||  |||||||||||    
T  21625235 agaagattggaagagtaaagcaacggctattt-gaaagcatttgaaggcattgcatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagt 21625137  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  21625136 gtacaaccactat 21625124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 12715329 - 12715546
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaag-ctgtttaacggattcaaactcgtctaa 101  Q
    ||||| |||||||||  |||||||| |||||||||||||||||||||  |||||  |||||||||||||||| ||||| || ||||| || |||||||||    
T  12715329 aagttcatcagaagc--aagatcactagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatctcgtctaa 12715426  T
Q  102 ag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
       ||| ||||||||| || |||  |||||||||||||||| || ||||  || |||||| |||| |||||||  ||||||||||||| |||||  ||||    
T  12715427 gcattgcagaagattgaaagagtgaagcaacgactattttgaaatgatttgaaagcattgtatgcctattctttgaagagcgttgacaaagtacaattgt 12715526  T
Q  201 acgaagtgtacaaccactat 220  Q
    |||||||||| |||||||||    
T  12715527 acgaagtgtagaaccactat 12715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 26972132 - 26972351
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||| ||| ||||||||||| | || ||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  26972132 aagcaagttcatcagaagcagaaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtc 26972231  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| | ||| |||  |||||| ||||||||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||  |    
T  26972232 taagcattgcagaagacttgaagagtgaagcaacaactattttgaaaggatttaaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaat 26972331  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||  ||||||||||||||||||    
T  26972332 tg--cgaagtgtacaaccacta 26972351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 29918259 - 29918041
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||  |||||||||  ||| ||| |||||| |||||||||||||||  |||||  |||||||||||||| | |||| |  ||||| || ||||||    
T  29918259 aagcaagtccatcagaagc--aagttcatcagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcat-ggatttaatctcgtc 29918163  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| ||||||||||||||||  ||||||||||| |||| || ||||  |||||||  ||||||| |||||||||||||||||||| |||||  |    
T  29918162 taagcattgcagaagattggaaaagtgaagcaacgactagtttgaaaagatttgaaggcatcagatgcttgttcttcaaagagcgttgacaaagtacaat 29918063  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  29918062 tgtacgaagtgtacaaccacta 29918041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 15531549 - 15531749
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||||||||||||||||| |  |||||  |||||||||| ||| | |||| || | ||| || |||||||||   ||| |||||| | ||    
T  15531549 aagatcaccagaagttgtagttcatcagaagatgcaagacttaaagcttgaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactaga 15531648  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||| | |||||  ||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |||||||||| |||||||||||    
T  15531649 agagtaaaacaacggttattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccact 15531748  T
Q  219 a 219  Q
    |    
T  15531749 a 15531749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 15302386 - 15302223
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||| ||||| | |||| || ||||| || ||||||||||  ||| |||||| |||||||||  ||||||| |||||||| |||||||  |||||    
T  15302386 acttaaagcgtcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactggaaaagtgaagcaacggctattttgaaaggatttaaaggc 15302287  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||| |||||  |||||||||||||| ||||  |||||| |||||||||||||||||    
T  15302286 attggatgcttgttctttgaagagcgttgacattgtacaattgtacaaagtgtacaaccactat 15302223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 19688980 - 19688790
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| || ||||||||||||  ||| ||||||||||||||| | |||| || ||||| |  |||||| ||   |||||||| | ||||| |||  |||    
T  19688980 cagaagctgaagttcatcaggagatgcgacttaaagcttcaaaggttgttcaatggatttattctcgtccaagcattgtagaaaactggaagagtgaagc 19688881  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    || |||||||||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||  |||||||||||||| ||||||||    
T  19688880 aaggactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 19688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 13435767 - 13435556
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||||||| ||| || ||||||||||||  |||||  |||||||||||||| | | || || ||||| || ||||| |||   |||     
T  13435767 atcagaagcagaagatcaccataagctgaagttcatcaggagatgcaagacttaaagcttcaaaggattttcaatggatttaatctcgtttaagcattgc 13435668  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||||||||| |||  |||||||||||||||| |||||||  || |||||| ||| || |||||  || |||||||||| |||||  |||||||||||    
T  13435667 agaagattggaagagtgaagcaacgactattttgaaaggatttgaaagcattgaatgattgttctttgaaaagcgttgacaaagtacaattgtacgaagt 13435568  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  13435567 gtacaaccacta 13435556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 14100373 - 14100565
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtata 126  Q
    |||||| || ||||||||||||  |||||  ||||||| |||||| | |||| || ||||| || ||| |||||   |||||||||| ||||| |||  |    
T  14100373 cagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggatgttcaatggatttaatctcatctaagcattgtagaagactggaagagtgaa 14100472  T
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    | ||| ||||||||| |||||||  |||||||||||||||| ||||| |||||||||||||| |||||  || ||||||||||||||||||||    
T  14100473 gaaacaactattttgaaaggatttgaaggcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccacta 14100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 16265056 - 16265275
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||| ||| ||  |||||| |||||||| ||| | |||| || ||||| || ||| ||||    
T  16265056 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcgtcaagagatgcaacataaagcttgaaaggttgttcaatggatttaatctcatcta 16265155  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| | | || |||||||||  |||||||| ||  ||| |||| ||  || ||||||||||||| |||||||||||||||||| | |||||  |||    
T  16265156 agcattgcacaggactggaaaagtgaagcaacgagtagattgaaaggttttgaatgcattggatgcttgttcttcaaagagcgttgagaaagtacaattg 16265255  T
Q  200 tacgaagtgtacaaccacta 219  Q
    |||||||||| |||||||||    
T  16265256 tacgaagtgtgcaaccacta 16265275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 19482840 - 19482775
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  19482840 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 19482775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 23284799 - 23284591
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||| | ||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   |||     
T  23284799 atcagaagcagaagatcgctagaagctgaagttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgc 23284700  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||||||   |||||||  ||||||| |||||||| |||||||  ||||||||| |||||| ||| |  ||||||||||||| |||||  |||||||||||    
T  23284699 agaagaccagaaaagtgaagcaacgcctattttgaaaggatttgaaggcattgaatgcttgttccttgaagagcgttgacaaagtacaattgtacgaagt 23284600  T
Q  208 gtacaacca 216  Q
    ||| |||||    
T  23284599 gtataacca 23284591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 25597714 - 25597558
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||| | |||| || ||||| || |||||||||   ||||    
T  25597714 atcataagctgaagatcaccagaagttgtagttcatcaggacatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtctaagcattgt 25597615  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatg 164  Q
    |||||| ||||| |||  ||| ||| |||||| | |||||||  |||||||||||||    
T  25597614 agaagactggaagagtgaagcgacggctatttcgaaaggatttgaaggcattggatg 25597558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20112603 - 20112826
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgt 97  Q
    |||||||||  ||||||||| ||||||||| |||| || ||||||||| ||  |||||  |||||||||| ||||| | ||| || ||||| || ||| |    
T  20112603 aagcaagttcttcagaagctaaagatcacctgaagctgaagttcatcaagagatgcaagacttaaagcttaaaaaggttgttcaatggatttaatctctt 20112702  T
Q  98 ctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
    ||||   ||| ||||||  |||| | |  |||||||||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||      
T  20112703 ctaagcattgcagaagaccggaagaatgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaa 20112802  T
Q  197 ttgtacgaagtgtacaaccactat 220  Q
    ||||||||| ||||||||||||||    
T  20112803 ttgtacgaaatgtacaaccactat 20112826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 13602407 - 13602195
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||| |||| ||||||||| ||||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || || ||||||   |||     
T  13602407 atcaaaagccgaagatcacaagaagctatagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgc 13602308  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||| ||||||||| || || |  ||||||||||||||||||||||  |||| |||||||| | |||  ||||| |||||    
T  13602307 agaagactggaagagtgaagcaaccactattttgaaatgaattgaaggcattggatgcttattctttgaagaacgttgacaaaatacaattgtaagaagt 13602208  T
Q  208 gtacaaccactat 220  Q
    ||| |||||||||    
T  13602207 gtataaccactat 13602195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 17316586 - 17316651
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  17316586 gcatcggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 17316651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 24116936 - 24116851
Alignment:
Q  135 tattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||| |||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  24116936 tattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 24116851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 18378431 - 18378337
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| |||||||  |||||||||||||| | |||||  ||||||||||| | |||||  ||||||||||||||||||||||||    
T  18378431 agcaacaactattttgaaaggatttgaaggcattggatgcatgttctttgaagagcgttgataaagtacaattgtacgaagtgtacaaccactat 18378337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 139274 - 139355
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaa 82  Q
    |||||||||||||||||||| || |||||||||| |||| |||||||||    |||||||||| ||||||||||||||||||    
T  139274 aagcaagtttatcagaagctaaaaatcaccagaaattgtcgttcatcagaggatgcaacttaaggcttcaaaagctgtttaa 139355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 147295 - 147376
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaa 82  Q
    |||||||||||||||||||| || |||||||||| |||| |||||||||    |||||||||| ||||||||||||||||||    
T  147295 aagcaagtttatcagaagctaaaaatcaccagaaattgtcgttcatcagaggatgcaacttaaggcttcaaaagctgtttaa 147376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19086392 - 19086181
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctg-tttaacggattcaaactcgt 97  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||||  ||||  ||||||||| ||||  |||| || || ||||| || |||||    
T  19086392 aagcaagttcatcaga-gctgaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagc-tcaagggctgattcaatggatttaatctcgt 19086295  T
Q  98 ctaa-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
    ||||   ||| |||||| ||| | |||  ||||||||||||||||          || ||||||||||||| |||||  |||||||||||||||||||      
T  19086294 ctaagtattgcagaagactgggagagtgaagcaacgactattttg----------aaagcattggatgcttgttctttgaagagcgttgacatagtacaa 19086205  T
Q  197 ttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||||||    
T  19086204 ttgtacgaagtgtacaaccactat 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 15987324 - 15987256
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  15987324 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 15987256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 21235216 - 21235149
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||||||| |||||||||||||||||||| |||||  ||||| |||||||||||||||||    
T  21235216 aaggcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccacta 21235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 17381595 - 17381545
Alignment:
Q  169 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  17381595 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaatcacta 17381545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21235356 - 21235256
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||  |||||| |||||||| ||| | |||| || ||||| || ||||||||    
T  21235356 aagcaagttcatcagaagctgaaaatcactagaagctgcagttcatcaggagatgcaacataaagctttaaaggttgttcaatggatttaatctcgtcta 21235257  T
Q  101 a 101  Q
    |    
T  21235256 a 21235256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 26943675 - 26943600
Alignment:
Q  144 aggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||| |||||||||||||||| |||||  |||||||||| |  |||||  |||||||||||||||||||||||    
T  26943675 aggattagaaggcattggatgcttgttctttgaagagcgttggcgaagtacaattgtacgaagtgtacaaccacta 26943600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 26589671 - 26589623
Alignment:
Q  172 ttcaaagagcgttgacatagtacgtttgtacg-aagtgtacaaccacta 219  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26589671 ttcaaagagcgttgacatagtacgtctgtacgaaagtgtacaaccacta 26589623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 19624203 - 19624002
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || |||||||| |||||| ||   ||| | ||||   ||    
T  19624203 aagatcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccaga 19624104  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgaca-tagtacgtttgtacgaagtgtacaaccac 217  Q
      |||  ||||||||||||| || |||||||  || |||||||||| || |||||   |||||||| ||| ||||||  |||||||||||||||||||||    
T  19624103 ggagtgaagcaacgactattctgaaaggatttgaaagcattggatgattgttctttggagagcgtt-acactagtacaattgtacgaagtgtacaaccac 19624005  T
Q  218 tat 220  Q
    |||    
T  19624004 tat 19624002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17608229 - 17608331
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaa--aagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||| | ||||||||||| | ||||||||||| |  |||||| | ||| |||||  ||||||||||  |||||||| ||| ||    
T  17608229 aagcaagttcatcagaagctgtatatcaccagaagctatagttcatcagaagatgcaacctgaagtttcaaataagctgtttattggattcaacctcatc 17608328  T
Q  99 taa 101  Q
    |||    
T  17608329 taa 17608331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 25594155 - 25594092
Alignment:
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| |||||  ||| ||||||||| |||||  ||||||||| |||||||||||||    
T  25594155 cattggatgcttgttctttgaagcgcgttgacaaagtacaattgtacgaaatgtacaaccacta 25594092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 24117053 - 24116974
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaa-gctgtttaacggattcaaactcgtc 98  Q
    |||||||||||||| || |||||||||| |  ||||  |||||||||||||||| |||||| || |||||||| ||||||    
T  24117053 aagatcaccagaagatgaagttcatcagaagatgcaagacttaaagcttcaaaaggctgttcaatggattcaatctcgtc 24116974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 22674013 - 22673793
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||     
T  22674013 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatccggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtctg 22673914  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| | |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22673913 gagattgcagaagactagaaaagtatagcaacatctattttggaaggattagaagacattggatgcttattcttcaaagagcgttgacatagtacgtttg 22673814  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  22673813 tacgaagtgtacaaccactat 22673793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 36105430 - 36105211
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  36105430 aagcaagtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 36105331  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  36105330 aagattgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttg 36105231  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||| ||||||||||||||||    
T  36105230 tacaaagtgtacaaccacta 36105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 22663351 - 22663135
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  22663351 aagcaagtttattagaagctgaagatcactagaagttgtagttcattaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctg 22663252  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22663251 aagattgcagaagactggaaaaatatagcaacaactattttggaaagattagaagacattggatgcttattcttcaaagagcgttgacatagtacgtttg 22663152  T
Q  200 tacgaagtgtacaacca 216  Q
    |||||||||||||||||    
T  22663151 tacgaagtgtacaacca 22663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 40845304 - 40845523
Alignment:
Q  1 aagcaagtttatcagaagctgaaga-tcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtct 99  Q
    |||||||||||||||||||| |||| |||||||||| | |||||||||||||  |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  40845304 aagcaagtttatcagaagct-aagactcaccagaagctatagttcatcaggagatgcagcttaaagcttcaaaagttgtttaa-ggattcaaactcgtct 40845401  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  40845402 aaagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaggcattggatgcttattcttcaaagagcgttgacatagtacgatt 40845501  T
Q  199 gtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||||    
T  40845502 gtacgaagtgtacaaccactat 40845523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15336004 - 15336223
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  15336004 aagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtcta 15336103  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||  |||||  |||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15336104 aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttg 15336203  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  15336204 tacgaagtgtacaaccacta 15336223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15425069 - 15425288
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  15425069 aagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtcta 15425168  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||  |||||  |||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15425169 aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttg 15425268  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  15425269 tacgaagtgtacaaccacta 15425288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15516373 - 15516592
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  15516373 aagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtcta 15516472  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||  |||||  |||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15516473 aagattgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttg 15516572  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  15516573 tacgaagtgtacaaccacta 15516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 24551509 - 24551290
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||  || ||||||||||| || ||||||||| |   |||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  24551509 aagcaagtttatcagaagccaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaatggattcaacctcgtcta 24551410  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||  |||||||||||||||| || ||||  |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  24551409 aagattgcagaagactggaaaagtgaagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcgttaacatagtacgtttg 24551310  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  24551309 tacgaagtgtacaaccacta 24551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6407951 - 6407741
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||| ||   ||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  6407951 aagcaagttcatcagaagttgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaaaggattcaaactcgtcta 6407852  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |||||||||||  ||||| |||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  6407851 agattgcagaagactggaaaagtattacaacggctattttgg---------aaggcattggatgctaattcttcaaagagcgttgacatagtacgtttct 6407761  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  6407760 acgaagtgtacaaccactat 6407741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14989376 - 14989587
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || | ||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||     
T  14989376 aagcaagttcatcagaagctgtgaatcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagccgtttaaaggattcaaactcgtctg 14989475  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| |||  |||||||||||||||||| ||||| ||| |||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14989476 aagattgctgaagattggaaaagtataacaacggctaatttgg---------aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 14989566  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||| ||||||||||||||    
T  14989567 tacgaattgtacaaccactat 14989587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 23185142 - 23185361
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||  |||||| |||||||||||| | |||| || ||||| || ||||||||    
T  23185142 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatctcgtcta 23185241  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| |||||||||  ||||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||| |||||  |||    
T  23185242 agcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattg 23185341  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  23185342 tacgaagtgtacaaccacta 23185361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9320805 - 9320584
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtct 99  Q
    |||||||||||||||||||| || ||||||||||| || ||||||||||    |||||||||| ||||||||||||||||||  |||||||| |||||||    
T  9320805 aagcaagtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaattggattcaacctcgtct 9320706  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtt 197  Q
    |||| ||| |||||| |||||||||  |||||| | ||||||| |||||||  || |||||||||||||||||||| |||||||||||||| ||||  ||    
T  9320705 aaagattgcagaagactggaaaagtgaagcaacaattattttgaaaggatttgaacgcattggatgcttattcttcaaaagagcgttgacaaagtatatt 9320606  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  9320605 tgtacgaagtgtacaaccacta 9320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 1237872 - 1237653
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||  || || |||||||| || | ||||||| |   |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  1237872 aagcaagtttatcagaagccaaaaattaccagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagctgtttaatggattcaacctcgtcta 1237773  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| ||||||  ||||||||  |||||||||||||||| |||||||  ||||||||||||  || |||||||||||||||||||| ||||| ||||    
T  1237772 aagattgcagaagaccggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatatttgttcttcaaagagcgttgacaaagtacttttg 1237673  T
Q  200 tacgaagtgtacaaccacta 219  Q
    | ||||||||||||||||||    
T  1237672 tgcgaagtgtacaaccacta 1237653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 45538355 - 45538574
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||| ||||||||| ||||  || ||||||||||| || ||||||||| |   |||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  45538355 aagcgagtttatcataagccaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaatggattcaacctcgtcta 45538454  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||  |||||| ||||||||| |||||||  ||| |||||||||||| |||||||||||||||||||| |  |||||||    
T  45538455 aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaatcacgtttg 45538554  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  45538555 tacgaagtgtacaaccacta 45538574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 16207530 - 16207321
Alignment:
Q  14 agaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtaga 110  Q
    ||||||| |||||||||||||| | |||||||||||||  |||||  |||||||||||||| |||||| || ||||| || |||||||||   ||| |||    
T  16207530 agaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaacgctgttcaatggatttaatctcgtctaagcattgcaga 16207431  T
Q  111 agattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgta 210  Q
    ||| ||||| |||| |||||| ||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||    
T  16207430 agactggaagagtaaagcaactactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgta 16207331  T
Q  211 caaccactat 220  Q
    ||||||||||    
T  16207330 caaccactat 16207321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 17797657 - 17797438
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || || |||||||||  ||||||||||||| ||||||| |||| || |||||||| ||||||||    
T  17797657 aagcaagttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgcaacttaaagcctcaaaagttgttcaatggattcaatctcgtcta 17797558  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||  |||||| |||||||||   |||||| ||| |||| ||||| |  |||||||||||||||| |||||||||||||||||||| |||||  |||    
T  17797557 accattacagaagactggaaaagtgatgcaacggctagtttgaaaggaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattg 17797458  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  17797457 tacgaagtgtacaaccacta 17797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 39693762 - 39693550
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||  |||||||||||||| | |||| || |||||||| |||||||||   |||     
T  39693762 atcagaagctgaagatcaccagaagttgtagctcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagcattgc 39693663  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  ||||| |||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||  |||||||||||    
T  39693662 agaagactggaagagtgaagcaatgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagt 39693563  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  39693562 gtacaaccactat 39693550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18151581 - 18151782
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||||| |||||||||| |  |||||||||||||||||||||          |||||||||||||||     
T  18151581 aagcaagttcatcagaagctgtgaatcaccagaagttgcagttcatcagaagatgcaacttaaagcttcaaaag----------gattcaaactcgtctg 18151670  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||| ||||||||| |||||||||         |||||||||||||||||||||||||| |||||||||||||||||    
T  18151671 aagattgcagaagactggaaaagtataacaacgactaatttggaagg---------cattggatgcttattcttcaaagagcattgacatagtacgtttg 18151761  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||| ||||||||||||||    
T  18151762 tacgaattgtacaaccactat 18151782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19156433 - 19156211
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||   ||||||||||||| |||||| || ||||| || ||||||    
T  19156433 aagcaagttcatcagaagctgaagatcaccagaagttgtagttcatcaagagatgcaagaattaaagcttcaaaggctgttcaatggatttaatctcgtc 19156334  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||    ||| |||||| | ||| |||  ||||||||||| |||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |    
T  19156333 tatgcattgcagaagactagaagagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaat 19156234  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||| ||||||||||||||    
T  19156233 tgtacgaaatgtacaaccactat 19156211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21301248 - 21301038
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||| |  |||| |||| |||||||||||||| |  || || |||||| |||    
T  21301248 aagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaatgactctaactcgccta 21301149  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||||||||||||||| |||||| ||||||||          || |||||||||||||| || |||||||||||||||||||||||||||    
T  21301148 aagattgcagaagattggaaaagtatggcaacggctattttg---------aaatgcattggatgcttactcctcaaagagcgttgacatagtacgtttg 21301058  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||| ||||||||||||||||    
T  21301057 tacaaagtgtacaaccacta 21301038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 24832972 - 24833192
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||||||| ||||||| || ||||||||||| || ||||||||||    |||||||||| |||||||||||||||||| || |||||| |||||||    
T  24832972 aagcaagtttattagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtct 24833071  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | ||| |||||| || ||||||  ||||| | ||| |||| | |||||  || ||||||||||||| ||| ||||| |||||||||||| |||||||    
T  24833072 aaggattgcagaagactg-aaaagtgaagcaatggctactttgaagggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatggtacgtt 24833170  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  24833171 tgtacgaagtgtacaaccacta 24833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12757677 - 12757899
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||||  |||||  |||||| ||| ||| | |||| || ||||| || ||||||    
T  12757677 aagcaagttgatcagaagctgaagatcaccagtagctctagttcatcaggagatgcaagacttaaaactttaaaggatgttcaatggatttaatctcgtc 12757776  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| || || |||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |    
T  12757777 taagcattgcagaagactgaaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaat 12757876  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  12757877 tgtacgaagtgtacaaccactat 12757899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3598262 - 3598364
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  3598262 aagcaagttcatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacagattcaaactcgtcta 3598361  T
Q  101 aag 103  Q
    |||    
T  3598362 aag 3598364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 16189200 - 16188999
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||||||||||||  | ||||||| ||||  |||||  |||||||||||||| | ||||||| ||||| || |||||| ||   ||| |||||| ||||    
T  16189200 aagatcaccagaagccgaagttcattaggagatgcaagacttaaagcttcaaaggttgtttaatggatttaatctcgtccaaccattgcagaagactgga 16189101  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| || ||||  ||||||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||    
T  16189100 agagtgaagcaacgactattttgaaatgatttgaaggcattggatgcttattcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 16189001  T
Q  219 at 220  Q
    ||    
T  16189000 at 16188999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 43639999 - 43639798
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtct-aaagttgtag 109  Q
    |||||||||||   ||||||||||| || ||||||||| ||  ||||||||||||||||||||| ||||| | ||||||||||||| || ||| ||| |     
T  43639999 atcagaagctgtgtatcaccagaagatgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcaa 43639900  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| |||||||||||  ||||||||||||||          ||||||||| ||||||||| ||||||||||||||||||  |||||||| |||||||||    
T  43639899 aagactggaaaagtatgacaacgactattttg---------aaaggcattgaatgcttatttttcaaagagcgttgacatgttacgtttgcacgaagtgt 43639809  T
Q  210 acaaccactat 220  Q
    |||||||||||    
T  43639808 acaaccactat 43639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 33083073 - 33082873
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   ||| |||||||  ||    
T  33083073 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagatcaga 33082974  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  33082973 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 33082874  T
Q  219 a 219  Q
    |    
T  33082873 a 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13430552 - 13430763
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagctt-caaaagctgtttaacggattcaaactcgtct 99  Q
    ||||||||| |||||||||||   ||||||||||| |  ||||||||||||  || ||||||||| || |||||||||||| | ||| || |||||| ||    
T  13430552 aagcaagttcatcagaagctgtgtatcaccagaagctacagttcatcaggagatggaacttaaagttttcaaaagctgtttcaaggactctaactcgcct 13430651  T
Q  100 a-aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    | || ||| |||||||| |||||||||  ||||| |||||||| || |         ||||||||||||||||||||||||| |||||||||||||||||    
T  13430652 agaaattgcagaagattagaaaagtatgacaacggctattttgaaacg---------cattggatgcttattcttcaaagagtgttgacatagtacgttt 13430742  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  13430743 gtacgaagtgtacaaccacta 13430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 30421354 - 30421564
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtag 109  Q
    |||||||||| || ||||||||||| || |||||||||| |  |||||| |||||||||||| |||||| || ||||| || |||||||||   ||| ||    
T  30421354 atcagaagctcaaaatcaccagaagctgcagttcatcagaagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 30421453  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattc--ttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||| |||||||||  ||||||||||| |||| | |||||  |||||||||||||||| |||  ||||||||||||||||| |||||  |||||||||||    
T  30421454 aagactggaaaagtgaagcaacgactagtttgaatggatttgaaggcattggatgcttgttcttttcaaagagcgttgacaaagtac-attgtacgaagt 30421552  T
Q  208 gtacaaccacta 219  Q
     |||||||||||    
T  30421553 ttacaaccacta 30421564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 17441732 - 17441943
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| | |||||||||||||  |||||  |||||||||| ||| | |||| || ||| | || ||| |||||   |||     
T  17441732 atcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcctctaagcattgc 17441831  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| | || |||||||||||||||| |||||||  ||| ||||||||||||||||||  ||||||||||||| |||||  |||||| ||||    
T  17441832 agaagactggaagactaaagcaacgactattttgaaaggatttgaag-cattggatgcttattctttgaagagcgttgacaaagtacaattgtactaagt 17441930  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  17441931 gtacaaccactat 17441943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 17914686 - 17914474
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||| ||||||||||| |||| ||||  |||||   ||||||||||||||| |||| || ||||| || |||||||||   |||     
T  17914686 atcagaagctgaagatcactagaagttgtagctcattaggagttgcaagagttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgc 17914587  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  |||||| ||||||||| |||||||  |||||||| ||||||| |||||  ||||||||||||| |||||  |||||||||||    
T  17914586 agaagactgtaagagtgaagcaacaactattttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagt 17914487  T
Q  208 gtacaaccactat 220  Q
    ||| |||||||||    
T  17914486 gtataaccactat 17914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 602634 - 602856
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||| ||||| |||||||| ||||| |  ||||||||||||| |||||  |||||| ||||||| | |||| |  |||||||| ||||||    
T  602634 aagcaagttcatcaaaagctaaagatcacaagaagctaaagttcatcaggaaatgcaagacttaaaacttcaaaggttgttcattggattcaatctcgtc 602733  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| | ||| |||  ||||| |||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||  |    
T  602734 taagcattgcagaagacttgaagagtgaagcaatgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaat 602833  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  602834 tgtacgaagtgtacaaccactat 602856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21933120 - 21932899
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||| ||||||||||| | || ||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  21933120 aagcaagttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtc 21933021  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| | |||| || || |||  | ||||| |||||||| |||||||  ||||||||| |||||| || ||||||||||||||||| ||||   |    
T  21933020 taagcattgcataagactgaaagagtgaaacaacggctattttgaaaggatttaaaggcattgtatgcttgtttttcaaagagcgttgacaaagtaaaat 21932921  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  21932920 tgtacgaagtgtacaaccacta 21932899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 18121033 - 18121236
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||| |||||||||||||| | |||||||||||||  |||||  ||||||| |||||| |||||| || ||||| || |||||||||   |||     
T  18121033 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagtttcaaaggctgttcaatggatttaatctcgtctaagcattgc 18121132  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| | ||| |||  ||||||  |||||||| |||||||  |||||||||||||||| ||||||||||||| || ||| |||||  |||||||||||    
T  18121133 agaagactagaagagtgaagcaactgctattttgaaaggatttaaaggcattggatgcttgttcttcaaagagcattaacaaagtacaattgtacgaagt 18121232  T
Q  208 gtac 211  Q
    ||||    
T  18121233 gtac 18121236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 16681238 - 16681439
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||| ||||| |  ||||||||||||  |||||  |||| ||||||||| |||||| || ||||| || |||||||||   ||| |||||| ||||    
T  16681238 aagatcactagaagctaaagttcatcaggagatgcaagacttagagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactgga 16681337  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  ||||||| ||| |||| |||||||  |||||||| ||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  16681338 agagtgaagcaacgtctagtttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 16681437  T
Q  219 at 220  Q
    ||    
T  16681438 at 16681439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 19943464 - 19943251
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaag-ctgtttaacggattcaaactcgtctaaag-ttg 106  Q
    |||||||||| |||||||| ||||| || ||||||||||||  |||||  |||||||||||||||| || || || ||||| || |||||||||   |||    
T  19943464 atcagaagctaaagatcactagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggctattcaatggatttaatctcgtctaagcattg 19943365  T
Q  107 tagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttatt-cttcaaagagcgttgacatagtacgtttgtacgaa 205  Q
     |||||| ||||| |||  |||||| ||||||||| |||||||  |||||||||||||||| || ||| ||| |||||||||| ||||   |||||||||    
T  19943364 cagaagactggaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcctttaaaaagcgttgacaaagtaaaattgtacgaa 19943265  T
Q  206 gtgtacaaccacta 219  Q
    ||||||||||||||    
T  19943264 gtgtacaaccacta 19943251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21288629 - 21288419
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||| ||| || ||||||||||||| |  |||| |||| |||||||  ||||| |  || || |||||| |||    
T  21288629 aagcaagttcatcagaagctgtgtatcaccacaagctgcagttcatcaggaaattgaactcaaagattcaaaatttgtttcattgactctaactcgccta 21288530  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||||||| |||||| |||||||| || |          |||||||||||| || |||||||||||||||||||| ||||||    
T  21288529 aagattgcagaagactggaaaagtatggcaacggctattttgaaatgt---------attggatgcttactcctcaaagagcgttgacatagttcgtttg 21288439  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  21288438 tacgaagtgtacaaccacta 21288419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 220
Target Start/End: Complemental strand, 24646567 - 24646353
Alignment:
Q  9 ttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-tt 105  Q
    ||||||||||||||||||||||||||| | |||||||||| ||  |||||   ||||||||||||| | |||| ||  |||| || |||||||||   ||    
T  24646567 ttatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagagttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcatt 24646468  T
Q  106 gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaa 205  Q
    | | |||| |  || ||| |||||||  |||||||| |||||||   |||||||||||||||||||||  ||||| ||||||| |||||  |||||||||    
T  24646467 gcataagactaaaagagtgtagcaacagctattttgaaaggatttgcaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaa 24646368  T
Q  206 gtgtacaaccactat 220  Q
    |||||||||||||||    
T  24646367 gtgtacaaccactat 24646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 29693542 - 29693334
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||| |||||||||||||||| |||||||||||||| ||||  |||||  ||||||||| ||||  |||||||| | ||| || |||||||||   |||     
T  29693542 atcataagctgaagatcaccataagttgtagttcattaggagatgcaagacttaaagctccaaagactgtttaatgaatttaatctcgtctaagcattgc 29693443  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  |||||| ||||||||| |||||||  || |||||| |||||| |||||  |||||| |||||| |||||  |||||||||||    
T  29693442 agaagactgaaagagtgaagcaaccactattttgaaaggatttgaaagcattgtatgcttgttctttgaagagctttgacaaagtacaattgtacgaagt 29693343  T
Q  208 gtacaacca 216  Q
    |||||||||    
T  29693342 gtacaacca 29693334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 33560295 - 33560359
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33560295 gcattggatgctaattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccacta 33560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 18679929 - 18679830
Alignment:
Q  121 agtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||| ||||||||||||||||  ||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  18679929 agtaaagcaacgactattttgataggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 18679830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 23263660 - 23263747
Alignment:
Q  132 gactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  23263660 gactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccacta 23263747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 45567854 - 45568036
Alignment:
Q  39 tagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaagttgtagaa-gattggaaaagtatagcaacgacta 136  Q
    ||||||||||| |  |||||| ||||| |||||| |||||||||| ||||||||||||||||||||     ||| || || |  |  ||||||||| |||    
T  45567854 tagttcatcagtagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtctaaagaaagcgaaagactgaagtataatagcaacggcta 45567953  T
Q  137 ttttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
     |||| |||||||  ||||||||||||| |||| |||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  45567954 atttgaaaggatttgaaggcattggatgattatccttcaaagagcgttgacaaagtacttctgtacgaagtgtacgaccacta 45568036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 18719110 - 18719016
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||  ||||||  || ||||||||||||| |||||  |||||||||| ||||||||  ||||||||||||||||||||||||    
T  18719110 agcaacgactattttgataggatttgaaagcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactat 18719016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 17525663 - 17525865
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgtctaaagt-tgtagaagattgg 117  Q
    |||||||||||||  |||||||||||||||  |||||  |||||| ||||||||| | ||| || ||||| ||  ||||||||    || |||||| |||    
T  17525663 aagatcaccagaaactgtagttcatcaggagatgcaagacttaaatcttcaaaaggttgttcaatggatttaatatcgtctaagcactgcagaagactgg 17525762  T
Q  118 aaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    || |||  | |||| ||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||  |||||| ||||||||||||||    
T  17525763 aagagtgaaacaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccac 17525862  T
Q  218 tat 220  Q
    |||    
T  17525863 tat 17525865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 20382329 - 20382530
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| |||||| || |||||||| |||||| |    ||| | |||| | ||    
T  20382329 aagatcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggctgttcaatggattcaatctcgtccatgcattgcaaaagactaga 20382428  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
      |||  ||||||| ||||| || |||||||  || | | |||||| || |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  20382429 ggagtgaagcaacggctattctgaaaggatttgaaagtagtggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 20382528  T
Q  219 at 220  Q
    ||    
T  20382529 at 20382530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 219
Target Start/End: Complemental strand, 17701971 - 17701761
Alignment:
Q  12 tcagaagctgaagatcaccagaagttgtagttcatcag--gaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgta 108  Q
    |||||||| || |||||||||||| || ||||||||||  || | |  ||||||||||||||| | |||| || | ||| || |||||||||   ||| |    
T  17701971 tcagaagcagatgatcaccagaagctgaagttcatcagaagatgagagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgca 17701872  T
Q  109 gaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtg 208  Q
    ||||||  ||| |||  |||||| ||||||||| |||||||  ||||||||||||||| |||| |  |||||||||| || ||||   |||||||||||     
T  17701871 gaagatcagaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgctaattcctttaagagcgttggcaaagtataattgtacgaagtt 17701772  T
Q  209 tacaaccacta 219  Q
    |||||||||||    
T  17701771 tacaaccacta 17701761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 18722688 - 18722782
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| ||| |||  |||||||| |||||||||| ||  ||||||||||| | | |||  ||||||||||||||||||||||||    
T  18722688 agcaacgactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactat 18722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 18731033 - 18731127
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| ||| |||  |||||||| |||||||||| ||  ||||||||||| | | |||  ||||||||||||||||||||||||    
T  18731033 agcaacgactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactat 18731127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 22745714 - 22745622
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    ||||||||||||||||||||||||| | |||||||||||||  ||||  ||||||||||||||| | |||| || ||||| || |||||||||    
T  22745714 atcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaa 22745622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 20255538 - 20255654
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||| ||||| |||||| || ||||| || |||||||||   ||  |||||| |||||||||  |||||||||||||||| |||||||  |||||    
T  20255538 acttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattacagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggc 20255637  T
Q  157 attggatgcttattctt 173  Q
    ||||||||||| |||||    
T  20255638 attggatgcttgttctt 20255654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 17267575 - 17267489
Alignment:
Q  134 ctattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||| |||||||  || ||||| ||||||| |||||  |||||| ||||||||||||  ||||||||| ||||||||||||||    
T  17267575 ctattttgaaaggatttgaaagcattagatgcttgttctttgaagagcattgacatagtacaattgtacgaattgtacaaccactat 17267489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 18685439 - 18685533
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| ||| |||  |||||||| |||||||||| ||  ||||||||||| | | |||  ||||||||||||||||||||||||    
T  18685439 agcaacaactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactat 18685533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 1745240 - 1745175
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg-aagtgtacaaccacta 219  Q
    |||||||||||| || |||||||| ||||||||||||||||| |||||| ||||||||||| ||||    
T  1745240 gcattggatgctaatacttcaaagtgcgttgacatagtacgtctgtacgaaagtgtacaacaacta 1745175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 18321083 - 18321291
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||  ||||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   |||     
T  18321083 atcagaagtagaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 18321182  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |  |||    || |||  ||||||  |||||||  |||||||  | |||||||||||||| |||||  ||| ||||||||| |||||  |||||||||||    
T  18321183 atgagaccaaaagagtgaagcaacagctattttcaaaggatttgagggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagt 18321282  T
Q  208 gtacaacca 216  Q
    |||||||||    
T  18321283 gtacaacca 18321291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 21541041 - 21540984
Alignment:
Q  138 tttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacg 195  Q
    |||| ||||| || |||||||||||||||||| |||||||||||||||||| ||||||    
T  21541041 tttgaaaggaatagaaggcattggatgcttatccttcaaagagcgttgacaaagtacg 21540984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 43644979 - 43644912
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| |||||  ||||||||| | | |||||  |||||||||||||||||||||||    
T  43644979 aaggcattggatgcttgttctttgaagagcgttaataaagtacaattgtacgaagtgtacaaccacta 43644912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 45292876 - 45292842
Alignment:
Q  185 gacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||||||||||||||||    
T  45292876 gacatagtacgtttgtacgaagtgtacaaccacta 45292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 2810882 - 2810840
Alignment:
Q  174 caaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  2810882 caaagagcgttgacatagtac-tttgtacgaactgtacaaccac 2810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 19707589 - 19707522
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||| ||| || |||||  |||| |||||||| |||||  |||||||||||||||||||||||    
T  19707589 aaggcattgaatggttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccacta 19707522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 25164129 - 25164085
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||| |||| ||||||||  ||||||||||||||||||||||||    
T  25164129 aagagtgttgtcatagtacaattgtacgaagtgtacaaccactat 25164085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3547 - 3328
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  3547 aagcaagtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 3448  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3447 aagattgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttg 3348  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||| ||||||||||||||||    
T  3347 tacaaagtgtacaaccacta 3328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 48570070 - 48570289
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| |||||||||||||||  ||||||||||| |||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  48570070 aagcaattttatcagaagctgagaatcaccagaagctgtaattcatcaggagatgcaacttaaagtttcaaaagctgtttaacggattcaaactcgtcta 48570169  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48570170 agattgcagaagactagaaaagtataacaacgactattttggaaggattaaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 48570269  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  48570270 acgaagtgtacaaccactat 48570289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 44821383 - 44821603
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||| ||| |||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  44821383 aagcaagtttatcagaagctgagaatcaccataagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtcta 44821482  T
Q  101 aagtt-gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    | ||| |||||||| || ||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  44821483 aggtttgtagaagactgaaaaagtatagcaacgactattttggaaggatttgaaggctttgtatgcttattcttcaaagagtgttgacatagtacgtttg 44821582  T
Q  200 tacgaagtgtacaaccactat 220  Q
    ||||||||||||||| |||||    
T  44821583 tacgaagtgtacaactactat 44821603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25448402 - 25448623
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgt--agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||||||||||||||||  ||||| ||||| ||   |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  25448402 aagcaagtttatcagaagctgagaatcactagaagctgcgcagttcatcagaagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtc 25448501  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||||| ||| |||||| |||||||||  |||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  25448502 taaagattgcagaagactggaaaagtgaagcagcgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtt 25448601  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  25448602 tgtacgaagtgtacaaccacta 25448623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21703055 - 21702836
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||  |||||||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||  ||||| | |||||||||||||||||    
T  21703055 aagcaagtacatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaatttgtttcaaggattcaaactcgtcta 21702956  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| | |||||||||||||||| |||||||| |||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  21702955 agattgcagaagacttgaaaagtatagcaacggctattttgaaaggattgaagggcattgaatgcttattcttcaaagagcgttgacatagtacgtttgt 21702856  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  21702855 acgaagtgtacaaccactat 21702836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 30572414 - 30572219
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagta 124  Q
    |||||||||||||| ||||||||||||  | |||||||||||||||| |||||||| | |||||||||||||||| |  ||| |||||| ||||||||||    
T  30572414 atcaccagaagttgcagttcatcaggagatacaacttaaagcttcaatagctgtttcaaggattcaaactcgtctgagattgcagaagactggaaaagta 30572315  T
Q  125 tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||| |||||||| |||||||  || |||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  30572314 tagcaacggctattttgaaaggattgaaaagcattggatgtttattcttagaagagcgttgacatagtacgattgtacgaagtgtacaaccactat 30572219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 35040408 - 35040189
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||  || ||||||||||| || | ||||||| |   |||||||||| |||||||||| ||||||| |||| ||| ||||||||    
T  35040408 aagcaagtttatcagaagccaaaaatcaccagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagttgtttaatggatccaacctcgtcta 35040309  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| | |||||||| |||||||||||||||| |||||||  || |||||||||||||  ||||||||||||||||||| ||||||||||    
T  35040308 aagattgcagaagactagaaaagtaaagcaacgactattttgaaaggatttgaaagcattggatgcttgatcttcaaagagcgttgacaaagtacgtttg 35040209  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  35040208 tacgaagtgtacaaccacta 35040189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 46089198 - 46089011
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagt 123  Q
    ||||||||||| || ||||||||| ||  ||||||||||||||||||||||||||| | ||||||||||||| |||||  ||| |||||| |||||||||    
T  46089198 atcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgcctaaaaattgcagaagactggaaaagt 46089099  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    || ||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46089098 atggcaacgactattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 46089011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 10251218 - 10251012
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||    ||||||||||| || ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10251218 aagcaagttcatcagaagctatgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtcta 10251119  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |||||||||||| ||||| ||| |||||         |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10251118 agattgcagaagactggaaaagtataacaacggctaatttgg---------aaggcattggatgcttattcttcaaagagttttgacatagtacgtttgt 10251028  T
Q  201 acgaagtgtacaacca 216  Q
    ||||||||||||||||    
T  10251027 acgaagtgtacaacca 10251012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 2327277 - 2327497
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||  || ||||||||||| || ||||||||||||  ||||||||||||||||||||| |||||||  ||||||||||||||||    
T  2327277 aagcaagtttatcagaagccaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatagattcaaactcgtcta 2327376  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgttt 198  Q
    ||| ||| ||| || || ||||||  |||||  ||||||||| |||||||  || ||||||||||||| ||| || ||||||| |||||| |||||||||    
T  2327377 aagattgcagatgactgaaaaagtgaagcaaaaactattttgaaaggattcgaacgcattggatgcttgttcctcaaaagagcattgacaaagtacgttt 2327476  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  2327477 gtacgaagtgtacaaccacta 2327497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 22600028 - 22600240
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||| |||||||||||||| | |||||||||||||  |||||  |||||||||||||| |||||| || ||||| || || ||||||   |||     
T  22600028 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatcttgtctaagcattgc 22600127  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||| | |||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |||||||||||    
T  22600128 agaagactggaagagtaaaacaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt 22600227  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  22600228 gtacaaccactat 22600240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22427195 - 22427414
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| |  ||||||||||||  |||||| ||||||||||||  ||||| ||  |||| || ||||||||    
T  22427195 aagcaagttcatcagaagctgaaaatcaccagaagctccagttcatcaggagatgcaacataaagcttcaaagactgttcaatagatttaatctcgtcta 22427294  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| |||||||||  ||||||||||| |||| |||||||  |||||||||||||||| ||||| ||| |||||||||| |||||  |||    
T  22427295 agcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaaaagcgttgacaaagtacaattg 22427394  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  22427395 tacgaagtgtacaaccacta 22427414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 2834919 - 2834714
Alignment:
Q  14 agaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaag 112  Q
    |||||||||| ||||||||||| || |||||||| |||  |||||||||||||||| |||| |||| || |||||||| |||||||||   |||| ||||    
T  2834919 agaagctgaaaatcaccagaagctgcagttcatcgggagatgcaacttaaagcttccaaagttgttcaatggattcaatctcgtctaagcattgttgaag 2834820  T
Q  113 attggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 212  Q
    | || ||||||  ||||||| ||| |||| |||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||||||| ||||||    
T  2834819 actgaaaaagtgaagcaacggctaatttgaaaggatttgaaggcattggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtaca 2834720  T
Q  213 accact 218  Q
    ||||||    
T  2834719 accact 2834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32785774 - 32785995
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| || |||||||||| ||||| |||||||||||||||||| ||  |||||  |||||||||||||| | |||| |  ||||| || ||||||    
T  32785774 aagcaagttcattagaagctgaaaatcactagaagttgtagttcatcatgagatgcaagacttaaagcttcaaaggttgttcat-ggatttaatctcgtc 32785872  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| |||||||||  ||||||||||| |||| |||||||  |||||||||||||||| ||||| |||||||||||||| |||||  |    
T  32785873 taagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaagagcgttgacaaagtacaat 32785972  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  32785973 tgtacgaagtgtacaaccactat 32785995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 29216029 - 29215820
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtag 109  Q
    ||||||||||||| |||||||||||||| | ||||||||||  ||||||||||||||||||| | ||||||| ||||| || |||||||||   ||| |     
T  29216029 atcagaagctgaaaatcaccagaagttgcaattcatcaggagatgcaacttaaagcttcaaaggttgtttaatggatttaatctcgtctaagcattgcaa 29215930  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| | |||||||  ||||||| ||| |||| |||||||  |||||||||||||||| |||||||||||||| | ||| |||||  |||||||||||||    
T  29215929 aagactagaaaagtgaagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgt 29215830  T
Q  210 acaaccacta 219  Q
    |||| |||||    
T  29215829 acaatcacta 29215820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28492240 - 28492462
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||  |||||  |||||||||||||| | |||| || ||||| ||  |||||    
T  28492240 aagcaagttcatcagaagctgaagatcttcagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtc 28492339  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| | ||| |||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  || |||||||||| |||||  |    
T  28492340 taagcattgcagaagactagaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaatagcgttgacaaagtacaat 28492439  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  28492440 tgtacgaagtgtacaaccactat 28492462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 1900579 - 1900368
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||| |||||| ||||||| | |||||||||||||  |||||  |||||||||||||| | | || || ||||| || |||||||||   |||     
T  1900579 atcagaagctaaagatcgccagaagatctagttcatcaggagatgcaagacttaaagcttcaaaggttattcaatggatttaatctcgtctaagcattgc 1900480  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  ||||||||| |||||| |||||||||||||||||||| |||||  ||||| |||||    
T  1900479 agaagactggaagagtgaagcaacgactattttgaaaggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagt 1900380  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  1900379 gtacaaccacta 1900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 39200830 - 39201049
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| |||||||| ||||||| ||| || ||||||| ||||  |||||| ||||||||||||||||||| || ||||| || ||| | ||    
T  39200830 aagcaagttcatcaaaagctgaaaatcaccaaaagctgcagttcattaggagatgcaacataaagcttcaaaagctgttcaatggatttaatctcatgta 39200929  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| || || |||  ||||||| ||| |||| |||||||  ||| |||||||||||| |||||||||||||||||||| |||||  |||    
T  39200930 agcattgcagaagactgaaagagtgaagcaacggctagtttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaagtacaattg 39201029  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  39201030 tacgaagtgtacaaccacta 39201049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 35402041 - 35401832
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgt 107  Q
    ||||||||||||||||||||||||| |||   ||||||| |  |||||  ||||||||||||||  ||||| || ||||| || ||||| ||||   |      
T  35402041 atcagaagctgaagatcaccagaagctgtc--tcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtttaaacaatac 35401944  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| |||||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |||||| ||||    
T  35401943 agaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagt 35401844  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  35401843 gtacaaccacta 35401832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22464646 - 22464866
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagct-gtttaacggattcaaactcgtct 99  Q
    ||||||||| || |||||||||| ||||||||| | |  ||||||||||||  || ||| |||||||||||||| | ||| |||||||| || ||| |||    
T  22464646 aagcaagttcataagaagctgaaaatcaccagatgctacagttcatcaggagatgtaacataaagcttcaaaaggttgttcaacggatttaatctcatct 22464745  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    ||   ||| |||||| |||||||||  ||||||||||| |||| || ||||  |||||||||||||||| |||||||||||||||||||| |||||   |    
T  22464746 aagcattgcagaagactggaaaagtgaagcaacgactaatttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagt 22464845  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||| ||||||    
T  22464846 gtacgaagtgtacatccacta 22464866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 42284860 - 42284651
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || |||||||||| |  |  ||||||||  |||||||||||||| | ||| || |||||| |||    
T  42284860 aagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcagaagattgaacttaaattttcaaaagctgtttcaaggactctaactcgccta 42284761  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||| | | ||| ||||||||||| || |         |||||||||||| |||||||||||||||||||||||||||||||    
T  42284760 aagattgcagaagactggaaaattgtggca-cgactattttgaaatg---------cattggatgctttttcttcaaagagcgttgacatagtacgtttg 42284671  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  42284670 tacgaagtgtacaaccacta 42284651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 20954319 - 20954531
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    ||||||||||||||||||||||||| | |||||||||||||  ||||  ||||||||||||||| | |||| || ||||| || |||||||||   |||     
T  20954319 atcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 20954418  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||||||  |||| |||  ||||| | | |||||| |||||||  || |||||||| ||||||||||  ||||||||||||| |||||  |||||| ||||    
T  20954419 agaagacaggaagagtgaagcaatggccattttgaaaggatttgaaagcattggaggcttattctttgaagagcgttgacaaagtacaattgtaccaagt 20954518  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  20954519 gtacaaccactat 20954531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21120910 - 21121121
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagctt-caaaagctgtttaacggattcaaactcgtct 99  Q
    |||||| || |||||||||||   ||||||||||| || ||||||||||||  || ||||||||| || |||||||||||| | ||| || |||||  ||    
T  21120910 aagcaaattcatcagaagctgtgtatcaccagaagctgcagttcatcaggagatggaacttaaagttttcaaaagctgtttcaaggactctaactcacct 21121009  T
Q  100 a-aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    | || | | |||||| ||||||| ||| |||||||||||| || || |         |||||||||||||||||||||||||||||||||||||||||||    
T  21121010 agaaatcgcagaagactggaaaaatatggcaacgactattctgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtacgttt 21121100  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||| ||||||||||||||    
T  21121101 gtacgacgtgtacaaccacta 21121121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 21984683 - 21984619
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21984683 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 21984619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 22154081 - 22153880
Alignment:
Q  21 gaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgg 117  Q
    ||||||||||||||| || ||||||||||||  |||||  |||||||||||||| |||||| || ||||| || |||||||||   ||| |||||| | |    
T  22154081 gaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactag 22153982  T
Q  118 aaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    || |||  |||||| |||| |||| |||||||  || |||||||||| || |||||  ||||||||||||| |||||  |||||||||||||||||||||    
T  22153981 aatagtgaagcaacaactaatttgaaaggatttgaaagcattggatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccac 22153882  T
Q  218 ta 219  Q
    ||    
T  22153881 ta 22153880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 33256208 - 33256409
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |  |||||| |||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||    
T  33256208 aagatcaccagaagctaaagttcaacaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgga 33256307  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||  |||||||  |||||||||||||||| |||||  ||| ||||||||| |||||  ||||||||||||||||||||||    
T  33256308 agagtgaagcaacgactattttaaaaggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccact 33256407  T
Q  219 at 220  Q
    ||    
T  33256408 at 33256409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 33276380 - 33276581
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |  |||||| |||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||    
T  33276380 aagatcaccagaagctaaagttcaccaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgga 33276479  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||  |||||||  |||||||||||||||| |||||  ||| ||||||||| |||||  ||||||||||||||||||||||    
T  33276480 agagtgaagcaacgactattttaaaaggatttgaaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccact 33276579  T
Q  219 at 220  Q
    ||    
T  33276580 at 33276581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 38282800 - 38282589
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagtt-gt 107  Q
    |||||| ||| |||||||||| ||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   | |     
T  38282800 atcagatgctaaagatcaccaaaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcatcgc 38282701  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||  ||||||| |||||||  ||||||||| |||||| |||||||||||||||||||| |||||  |||||||||||    
T  38282700 agaagactggaagagtgaagcaacgggtattttgaaaggatttaaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt 38282601  T
Q  208 gtacaaccactat 220  Q
     ||||||||||||    
T  38282600 -tacaaccactat 38282589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 21135153 - 21135217
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21135153 gcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccacta 21135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21204769 - 21204980
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttc-aaaagctgtttaacggattcaaactcgtct 99  Q
    ||||||||| |||||||| ||   ||||||||||| || ||||||||| ||  || ||||||||| ||  ||||| ||||| | ||| || |||||| ||    
T  21204769 aagcaagttcatcagaagttgtgtatcaccagaagctgcagttcatcaagagatggaacttaaagtttttaaaagttgtttcaaggactctaactcgcct 21204868  T
Q  100 a-aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    | || ||| |||||| ||||||||||| |||||| |||||||| || |         ||||||||| | |||||||||||||||||||||||||||||||    
T  21204869 agaaattgcagaagactggaaaagtatggcaacggctattttgaaatg---------cattggatgttaattcttcaaagagcgttgacatagtacgttt 21204959  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  21204960 gtacgaagtgtacaaccacta 21204980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 7744952 - 7745147
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgtagaagattggaaaagt 123  Q
    ||||||||||| || |||||||||| |  |||||| || || |||||||| ||||||| |||||||||||| |||||||  || | |||| || | |||     
T  7744952 atcaccagaagctgcagttcatcagaagatgcaacctacagtttcaaaagttgtttaatggattcaaactcatctaaagagtgcataagactgaagaaga 7745051  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
     |||||||   || |||| |||||||  || ||||| ||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  7745052 gtagcaacagttaatttgaaaggatttgaatgcatttgatgcttatccttcaaagagcgttgacaaagtacgtttatacaaagtgtacaaccacta 7745147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 16235138 - 16235353
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaa 102  Q
    ||||| |||||||||||||||||||||||||||||   ||||||  |  |||||   ||||| ||||||| | |||| ||  |||| || ||||||||||    
T  16235138 aagttcatcagaagctgaagatcaccagaagttgtc--tcatcataagatgcaagatttaaaacttcaaaggttgttcaattgatttaatctcgtctaaa 16235235  T
Q  103 gt-tgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
       || |||||| |||||||||  |||||||||||||||| |||||||  ||||||||| |||||| |||| ||||||| ||||||| |||||  |||||    
T  16235236 caatgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgttctccaaagagtgttgacaaagtacaattgta 16235335  T
Q  202 cgaagtgtacaaccacta 219  Q
    ||||||||||||| ||||    
T  16235336 cgaagtgtacaacaacta 16235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 36134323 - 36134213
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| |||||||||  |||||| ||||||||| |||||||  ||| |||||||||||| |||||||||||||||||||| |||||  |||||||||||    
T  36134323 agaagactggaaaagtggagcaacaactattttgaaaggatttgaag-cattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt 36134225  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  36134224 gtacaaccacta 36134213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 2267292 - 2267112
Alignment:
Q  40 agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactatt 138  Q
    ||||||||||||  |||||| |||||||||||| | |||| || ||||| || |||||||||   ||| |||||| |||||||||  |||||| |||| |    
T  2267292 agttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaactagt 2267193  T
Q  139 ttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| ||| |||  ||||||||||||| || ||||||||||||||||| || ||| |  ||||| |||||||||||||||||    
T  2267192 ttgaaagaatttgaaggcattggatgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccacta 2267112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 22201682 - 22201794
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || ||||||| |||||| ||||||||| |||||||  |||||||||||||||| ||||   ||||||||||||| |||||  |||||||||||    
T  22201682 agaagactgaaaaagtaaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctatgaagagcgttgacaaagtacaattgtacgaagt 22201781  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  22201782 gtacaaccactat 22201794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 37642335 - 37642271
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37642335 gcattggatgctaattcttcaaagagcgttgacatagtacgtttatacgaagtgtacaaccacta 37642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 14263417 - 14263508
Alignment:
Q  128 caacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||| |||||||  |||||||||||| ||| ||| ||||||||||||| || || |||||||||||||||||||||||||||    
T  14263417 caacgactattttgaaaggatttgaaggcattggatacttgttcctcaaagagcgttggcaaagcacgtttgtacgaagtgtacaaccacta 14263508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 12284539 - 12284445
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||| ||||||    
T  12284539 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactat 12284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 23024966 - 23024810
Alignment:
Q  54 tgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaa 153  Q
    |||||| |||||||||||||||||||| | ||||| || |||| |  || ||| |||||| | | ||||| ||||||||||||||||| || |           
T  23024966 tgcaacctaaagcttcaaaagctgtttcaaggatttaatctcgccagaaattgcagaagacttggaaagt-tagcaacgactattttgaaaag------- 23024875  T
Q  154 ggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
      |||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  23024874 --cattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 23024810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 23036375 - 23036584
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgt 107  Q
    ||||||||||||||||||||||||| |||   ||||||| |  |||||  |||||||||||||| ||| || || ||||| || ||||||||||   ||     
T  23036375 atcagaagctgaagatcaccagaagctgtc--tcatcagaagatgcaagacttaaagcttcaaaggctattcaatggatttaatctcgtctaaataatgc 23036472  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| |  ||||||  | |||| ||||||||| |||||||  ||| |||||||||||| |||||||||||||||  ||| || ||  |||||||||||    
T  23036473 agaagactaaaaaagtgaaacaacaactattttgaaaggatttgaagacattggatgcttgttcttcaaagagcgtcaacaaagaacaattgtacgaagt 23036572  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  23036573 gtacaaccacta 23036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 7310052 - 7309842
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||| ||| |  || |||||||||  |||||  ||||||||||||||||||||| || |||||||   |||||||| | |||     
T  7310052 atcagaagctgaagatcaccataagctaaagctcatcaggagatgcaagacttaaagcttcaaaagctgttcaatggattcagtgtcgtctaaggattgc 7309953  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| |  || |||  |||||||   |||||| | |||||  |||||||||||||||  ||||||||| |||||| || ||||||  |||||||||||    
T  7309952 agaagactataagagtgaagcaacggtcattttgtagggatttgaaggcattggatgctcgttcttcaaa-agcgttaacgtagtacaattgtacgaagt 7309854  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  7309853 gtacaaccacta 7309842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 19717709 - 19717547
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||| | |||| || ||||| || |||||| ||   ||| ||| || ||||| |||  |||||||||||||||| |||||||  |||||    
T  19717709 acttaaagcttcaaaggttgttcaatggatttaatctcgtcgaagcattgcagaggactggaagagtgaagcaacgactattttgaaaggatttgaaggc 19717610  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    || |||||||| |||||  ||||||||||||| |||||  |||||||||||||||||| ||||    
T  19717609 atcggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaacta 19717547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 2268713 - 2268554
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    |||||| |||||||| | |||| || ||||| || |||||||||   |||||||||| ||||| |||  ||||||   ||||||| || ||||  |||||    
T  2268713 acttaaggcttcaaaggttgttcaatggatttaatctcgtctaatcattgtagaagactggaagagttaagcaac---tattttgaaatgatttgaaggc 2268617  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| |||||| ||| |||||||||||||||| |||||  |||||||||||||||||||||||    
T  2268616 attgaatgcttgttcgtcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 2268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 10757663 - 10757443
Alignment:
Q  2 agcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgtc 98  Q
    |||||||| |||||||||  ||||||| || ||| || ||||||||||||  |||||  |||||||||||||||| | ||| || ||||| || ||||||    
T  10757663 agcaagttcatcagaagc--aagatcatcaaaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtc 10757566  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||| ||  ||| |||  |||||| ||||||||| |||||||  || |||||||||| || |||||  |||||| |||||| |||||  |    
T  10757565 taagcattgcagaaaatcagaagagtgaagcaacaactattttgaaaggatttgaaagcattggatgattgttctttgaagagcattgacaaagtacaat 10757466  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  10757465 tgtacgaagtgtacaaccactat 10757443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 1578001 - 1577889
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| ||| |||  || ||||||||||||| |||||  ||||||||||||| ||||   |||||| ||||    
T  1578001 agaagactggaagagtgaagcaacgactattttgaaagaatttgaaagcattggatgcttgttcttttaagagcgttgacaaagtataattgtactaagt 1577902  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  1577901 gtacaaccactat 1577889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 48704436 - 48704230
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgt 107  Q
    ||||||||||  ||||||||||||| |  |||||||||| |  |||||  |||||||||||||| | |||| || ||||| || ||||| |||    ||     
T  48704436 atcagaagct--agatcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaagcaatgc 48704339  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  | |||| ||||||||| |||||||  |||||| ||||||||| |||||  |||| |||||||| |||||  |||||||||||    
T  48704338 agaagactggaagagtgaaacaacaactattttgaaaggatttgaaggcactggatgcttgttctttgaagaacgttgacaaagtacaattgtacgaagt 48704239  T
Q  208 gtacaacca 216  Q
    |||||||||    
T  48704238 gtacaacca 48704230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 19215699 - 19215634
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||| ||||||||||| |||| |||||||||||||||  | ||||||||||||||||||||||||    
T  19215699 gcatttgatgcttattcctcaaggagcgttgacatagtgtgattgtacgaagtgtacaaccactat 19215634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 21191846 - 21191922
Alignment:
Q  143 aaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||  |||||||||||||||| |||||  |||||||||| || |||||  |||||||||||||||||||||||    
T  21191846 aaggatttgaaggcattggatgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccacta 21191922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 17024928 - 17025021
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||| ||   |||||||  |||||||||||||||| ||||| |||||||||||| | |  ||  |||||||||||||||||||||||    
T  17024928 agcaacgactaattcaaaaggatttgaaggcattggatgcttgttctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccacta 17025021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 30893200 - 30893114
Alignment:
Q  134 ctattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||| |||||||  || ||| | ||||||| |||||  || |||| |||||||||||  ||||||||||||||||||||||||    
T  30893200 ctattttgaaaggatttgaaagcactagatgcttgttctttgaatagcgctgacatagtacaattgtacgaagtgtacaaccactat 30893114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 12613807 - 12613871
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||| ||||| |||||  |||||||||| || |||||  |||||||||||||||||||||||    
T  12613807 gcattggttgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccacta 12613871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 34255509 - 34255573
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||  || ||||||||||||||||| ||  || |||||||| |||||||||||||    
T  34255509 gcattggatgctttatcctcaaagagcgttgacattgtgagtatgtacgaactgtacaaccacta 34255573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26701965 - 26702063
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcag--gaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgt 97  Q
    ||||||||| ||||||| ||||||||||||||||| |  ||||||||||  || | |  ||||||||||||||| ||||||  | |||||||| |||||    
T  26701965 aagcaagttcatcagaaactgaagatcaccagaagctaaagttcatcagaagatgggagacttaaagcttcaaaggctgttatatggattcaatctcgt 26702063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 37642477 - 37642382
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||| ||||||||||  | ||||||||||| || ||||||||||||| |  |||| |||| |||||||||||||| | ||| || |||||| |||    
T  37642477 aagttcatcagaagctatatatcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaaggactctaactcgccta 37642382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21029037 - 21029003
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaag 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  21029037 aagcaagttcatcagaagctgaagatcaccagaag 21029003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21135006 - 21135070
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaag 65  Q
    ||||||||| |||||||| ||   |||||||||||||| ||||||||||||  || |||||||||    
T  21135006 aagcaagttcatcagaagttgtgtatcaccagaagttgcagttcatcaggagatggaacttaaag 21135070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 29138306 - 29138524
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  29138306 aagcaagtttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagtttcaaaagctgtttaacagattcaaaatcgtcta 29138405  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29138406 agattgcagaagactggaaa-gtatagcaacaactattttggaaggattagaaggcattggatgcttattcttcaaagagcgttgtcatagtacgtttgt 29138504  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  29138505 acgaagtgtacaaccactat 29138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 15517208 - 15516989
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15517208 aagcaagtttatcagaagttgagaatcaccagaagttgtagttcatcagaagatgcaacttaaagcttcaaaagttgttcaacggattcaaactcgtcta 15517109  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  15517108 aagattgcagaagactggaaaagtatagcaacggctattttggaaggatttgaaggcattggatgcttattcttcaaagagtgttggcatagtacttttg 15517009  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  15517008 tacgaagtgtacaaccacta 15516989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 26759388 - 26759169
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  26759388 aagcaaatttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaattcgccta 26759289  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||| |||||    
T  26759288 aagattgcagaagactggaaaagtataacaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtaagtttg 26759189  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  26759188 tacgaagtgtacaaccacta 26759169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 3245340 - 3245559
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  |||||||||||||||| ||| |||||| | |||||||||||||||||    
T  3245340 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttccaaaactgtttcaaggattcaaactcgtcta 3245439  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |||||||||||||||||| |||||||| ||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3245440 agattgcagaagactggaaaagtatagcaacggctattttgaaagaattgaaaggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgt 3245539  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  3245540 acgaagtgtacaaccactat 3245559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 30743219 - 30743000
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| ||||||| |||||||  || || |||||||| ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  30743219 aagcaaatttatcataagctgagaattacgagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggattcaaactcgtcta 30743120  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||| | | |||||||| ||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  30743119 aagattgcagaagactggaaaggcaaagcaacgattattttgaaaggatttgaaggcattggatgtttattcttcaaagagcgttgacaaagtacgtttg 30743020  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  30743019 tacgaagtgtacaaccacta 30743000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4887261 - 4887042
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| || |||||||||  ||||||||||| || ||||||||| ||  ||||||||||||||||||||| |||| || ||||| ||||| ||||     
T  4887261 aagcaagttcattagaagctgagaatcaccagaagctgcagttcatcaagatatgcaacttaaagcttcaaaagttgttcaatggatttaaacttgtctt 4887162  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| | |||| ||||||||||||||||||||||||||| || ||||  |||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  4887161 aagattgcaaaagactggaaaagtatagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtgtg 4887062  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  4887061 tacgaagtgtacaaccacta 4887042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 11994127 - 11993908
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||||||  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  11994127 aagcaagtttatcagaagctgtgaatcaccagaagctgtagttcatcaggagatgcaacttaaagtttcaaaagatgttcaacggattcaaactcgtcta 11994028  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    | | ||| |||||| ||||| |||  ||||||| ||| |||| | |||||  || ||||||||||||| |||||||||||||||||||| ||||||| ||    
T  11994027 aggattgcagaagactggaatagtgaagcaacggctaatttgaagggatttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtacgtatg 11993928  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  11993927 tacgaagtgtacaaccacta 11993908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28464247 - 28464457
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||||   ||||||||||| || ||||||||||||  | ||||||||||||||||||||||||| | |||||||||||||||||    
T  28464247 aagcaagtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaactcgtcta 28464346  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |  ||||||||| ||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28464347 agattgcagaagactaaaaaagtataacaacggctattttg---------aaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 28464437  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  28464438 acgaagtgtacaaccactat 28464457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 42243920 - 42243700
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtct- 99  Q
    |||||| ||||||| || ||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  42243920 aagcaaatttatcaaaaactgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 42243821  T
Q  100 aaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttatt-cttcaaagagcgttgacatagtacgttt 198  Q
    ||| ||| |||||| |||||||||  |||||| ||||||||| |||||||  ||| |||| |||| || || ||| |||||||||||||| | |||||||    
T  42243820 aaaattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgttt 42243721  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  42243720 gtacgaagtgtacaaccacta 42243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 9089188 - 9088988
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtaga 110  Q
    |||||||||||   ||||||||||| || ||||||||||||  |||||||||||| |||||||||||||||| ||| |||||||||||||   ||| |||    
T  9089188 atcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagctgtttaaaggaatcaaactcgtctatgattgaaga 9089089  T
Q  111 agattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgta 210  Q
    ||| |||||||||||  |||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9089088 agactggaaaagtattacaacgactattttgg---------aaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgta 9088998  T
Q  211 caaccactat 220  Q
    ||||||||||    
T  9088997 caaccactat 9088988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 26765674 - 26765519
Alignment:
Q  63 aagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattgg 161  Q
    |||||||||||||||||||||| ||||||| ||| |||||| ||| |||||| ||||||||||||||||| |||||||||||||||||  ||||||||||    
T  26765674 aagcttcaaaagctgtttaacg-attcaaattcgcctaaagattgcagaagactggaaaagtatagcaacaactattttggaaggatttgaaggcattgg 26765576  T
Q  162 atgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26765575 atgcttattcttcaaagagcgctgaaatagtacgtttgtacgaagtgtacaaccact 26765519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 33022903 - 33022684
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||||||  |||||| |||||||||||| |||||| || ||||| || ||| ||||    
T  33022903 aagcaagttcatcagaagctgaaaatcaccagaatttgcagttcatcaggagatgcaacataaagcttcaaaggctgttcaatggatttaatctcatcta 33022804  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| |||||||||  ||||||||||| |||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||  |||    
T  33022803 agcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattg 33022704  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  33022703 tacgaagtgtacaaccacta 33022684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 41566330 - 41566552
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||  |||||||||||||||||| || || ||||| || ||||||    
T  41566330 aagcaagttcatcagaagctgaagatcatcagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaagctattcaatggatttaatctcgtc 41566429  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| | |||||||  ||||||| |||||||| |||||||  ||||||||||||| ||||||||  ||||||||||| |||||||  |    
T  41566430 taagcattgcagaagactagaaaagtgaagcaacgtctattttgaaaggatttgaaggcattggatgtttattctttgaagagcgttgatatagtacaat 41566529  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  41566530 tgtacgaagtgtacaaccactat 41566552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 25930087 - 25930274
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagt 123  Q
    ||||||||||| || | ||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| | |||| |||||||||    
T  25930087 atcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtctaaagattgcataagactggaaaagt 25930186  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| ||||| ||| ||| |||||         ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25930187 ataacaacggctaatttagaagg---------cattggatgcttatttttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactat 25930274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 33933510 - 33933287
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaa--gctgtttaacgg-attcaaactcgt 97  Q
    ||||||||||||||||||||||  ||||||| |||||| ||||||||||    ||||||||||||||||||||  | ||||||| || |||||| |||||    
T  33933510 aagcaagtttatcagaagctgagaatcaccataagttgcagttcatcagaggatgcaacttaaagcttcaaaaaagttgtttaatgggattcaacctcgt 33933411  T
Q  98 ctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacg 195  Q
    |||| | ||| | |||| |||||||||  |||||| ||||||||| |||||||  || ||||||||||||| ||| ||||| ||||||||| ||||||||    
T  33933410 ctaaggattgcaaaagactggaaaagtgaagcaacaactattttgaaaggatttaaacgcattggatgcttgttcctcaaaagagcgttgatatagtacg 33933311  T
Q  196 tttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||||    
T  33933310 tttgtacgaagtgtacaaccacta 33933287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 28139755 - 28139626
Alignment:
Q  91 aactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacata 190  Q
    |||||||||||   ||||||||| || |||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||| ||||||||||||||    
T  28139755 aactcgtctaagaatgtagaagactgaaaaagtatagcaacgactattttgaaaggattgaaagacattggatgcttattcttcatagagcgttgacata 28139656  T
Q  191 gtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| ||||||||||||||||||||||||||    
T  28139655 gtatgtttgtacgaagtgtacaaccactat 28139626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14086435 - 14086652
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||||||||| ||||| || || |||||||| || ||||||||||    |||||||||| |||||||||||||||||| || |||||| |||||||    
T  14086435 aagcaagtttatcaaaagctaaaaattaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtct 14086534  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | ||| |||||| |||||||||  ||||||| |||||||| |  ||||  || ||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  14086535 aaggattgcagaagactggaaaagtgaagcaacggctattttgaagtgatttgaatgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 14086634  T
Q  198 tgtacgaagtgtacaacc 215  Q
    ||||||||||||||||||    
T  14086635 tgtacgaagtgtacaacc 14086652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 10849003 - 10848792
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| ||||||   ||||||||||| || ||||||||| ||  ||||||||||||||||||||| ||||| | ||||||||||||| |||    
T  10849003 aagcaagttcatcataagctgtgtatcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgccta 10848904  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||  ||| |||| | ||||||||||| ||| |  |||||||| ||||         |||| |||||||||||||||||||||||||||||| ||||||||    
T  10848903 aaaattgcagaaaactggaaaagtatggcatcagctattttgaaagg---------cattagatgcttattcttcaaagagcgttgacataatacgtttg 10848813  T
Q  200 tacgaagtgtacaaccactat 220  Q
    ||| |||||||||||||||||    
T  10848812 tacaaagtgtacaaccactat 10848792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 31118088 - 31117897
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagct-gtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatag 127  Q
    |||||| || ||||||||||||  |||||| |||||||||||||| | |||||||||||| ||||||||||||   ||| |||||| |||||||||  ||    
T  31118088 cagaagctgcagttcatcaggagatgcaacataaagcttcaaaaggttgtttaacggatttaaactcgtctaagcattgcagaagactggaaaagtgaag 31117989  T
Q  128 caacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||| |||| ||| |||  |||||||||||||||| |||||||||||| ||||||| |||||   ||||||||||||||| ||||||    
T  31117988 caacgactaatttgaaagaatttgaaggcattggatgcttgttcttcaaagagtgttgacaaagtacaaatgtacgaagtgtacatccacta 31117897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35986139 - 35986349
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||||| ||||||||||||  |  ||||||||| |||||||| ||||| | ||| || |||||| |||    
T  35986139 aagcaagttcatcagaagctgtgaatcaccagaagttgcagttcatcaggagattgaacttaaagtttcaaaagatgtttcaaggactctaactcgccta 35986238  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    || ||| |||||| ||||||||| | |||||||||||||||          || ||||||||||| |||||||||||||||||||||||||||||| |||    
T  35986239 aaattgcagaagactggaaaagtgtggcaacgactattttg---------aaatgcattggatgcctattcttcaaagagcgttgacatagtacgtctgt 35986329  T
Q  201 ac-gaagtgtacaaccacta 219  Q
    ||  ||||||||||||||||    
T  35986330 acaaaagtgtacaaccacta 35986349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 89339 - 89540
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtagaagattgga 118  Q
    ||||||||||||||||||||||||||||||  |||||  |||||||||||||||| |||| || ||||| || ||||||||| | ||| ||||||   ||    
T  89339 aagatcaccagaagttgtagttcatcaggagatgcaaaacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagaattgcagaagaccaga 89438  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| ||| |||  || |||||| |||||| |||||  |||||| ||||||||||||  ||||||||||||||||||||||    
T  89439 agagtgaagcaacgactattttgaaagaatttgaaagcattgcatgcttgttctttgaagagcattgacatagtacaattgtacgaagtgtacaaccact 89538  T
Q  219 at 220  Q
    ||    
T  89539 at 89540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 30115855 - 30115955
Alignment:
Q  120 aagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||| |||||||||||||| |||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30115855 aagtataacaacgactattttgaaaggattgaagggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaaccacta 30115954  T
Q  220 t 220  Q
    |    
T  30115955 t 30115955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 35931936 - 35932123
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagctt-caaaagctgtttaacggattcaaactcgtcta-aagttgtagaagattggaaaag 122  Q
    ||||||||||| |  ||||||||| || ||| ||||||||| || |||||| ||||| | ||| || |||||| ||| || ||| |||||| ||||||||    
T  35931936 atcaccagaaggtacagttcatcaagaggtggaacttaaagttttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaag 35932035  T
Q  123 tatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| ||||||||||||||| || |         ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35932036 tatggcaacgactattttgaaacg---------cattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccacta 35932123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6512329 - 6512546
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  |||||||| |||||||||||||||||||||  |||||  |||||||||||||| | |||| |  ||||| || ||||||    
T  6512329 aagcaagttcatcagaagc--aagatcactagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcagtggatttaatctcgtc 6512426  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   |||  ||||| ||||| |||  |||||||||||||||| |||||||  ||||||||||   ||| |||||  ||||||||||||| |||||  |    
T  6512427 taagcattgctgaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg---cttgttctttgaagagcgttgacaaagtacaat 6512523  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  6512524 tgtacgaagtgtacaaccactat 6512546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 26784595 - 26784374
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||  |||||   ||||||||| ||| |||||| || |||||||| ||||||    
T  26784595 aagcaagttcatcagaagctgaagatcaccagaagctgtagttcagcaggagatgcaagatttaaagctttaaaggctgttcaatggattcaatctcgtc 26784496  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
     ||   ||| | ||||   ||  |||  |||||||||||||||| |||||||   | | | |||||||||||||||  |||||||||||||||||||  |    
T  26784495 caagcattgcaaaagaccagagcagtgaagcaacgactattttgaaaggatttggaagaactggatgcttattctttgaagagcgttgacatagtacaat 26784396  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  26784395 tgtacgaagtgtacaaccacta 26784374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 32161006 - 32160786
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtct 99  Q
    |||||||| |||||||||||| | ||||||||||  ||||||||||||| |  |||||| ||||| |||||| || ||||||| ||||||||||||||||    
T  32161006 aagcaagtctatcagaagctgtatatcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtct 32160907  T
Q  100 aaagttgtagaa-gattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    ||||     ||| || || |  |   |||||||  ||| |||| |||||||  |||||||||||||||||| |||||||||||||||||| || |||| |    
T  32160906 aaagaaagcgaaagactgaagtatagtagcaacagctaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagaacgtat 32160807  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    ||||||||||||| |||||||    
T  32160806 gtacgaagtgtacgaccacta 32160786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 21910776 - 21910575
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |  ||||||||||||  |||||  |||||||| ||||| |||||| ||  |||| || |||||||||   ||  | |||| ||||    
T  21910776 aagatcaccagaagctaaagttcatcaggagatgcaagacttaaagcgtcaaaggctgttgaattgatttaatctcgtctaagcattacaaaagactgga 21910677  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    |||||  |||||||| ||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  21910676 aaagtgaagcaacgattattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 21910577  T
Q  219 at 220  Q
    ||    
T  21910576 at 21910575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 7745717 - 7745810
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||| ||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  7745717 agcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 7745810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23412872 - 23413092
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||| ||    
T  23412872 aagcaagttcatcagaagc--aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatc 23412969  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
     ||   ||| ||||||   ||| |||  |||||||| ||||||| |||||||  || ||||||||||||| || ||  |||||||||||||||||||  |    
T  23412970 caagcattgcagaagaccagaagagtgaagcaacgattattttgaaaggatttgaaagcattggatgcttgttttttgaagagcgttgacatagtacaat 23413069  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  23413070 tgtacgaagtgtacaaccactat 23413092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 17815150 - 17814987
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||| |||||| || ||||| || |||||||||   ||| |||||| ||||| |||  ||||||||||||| || |||||||  || ||    
T  17815150 acttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattctgaaaggatttgaaagc 17815051  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| ||||||| |||||  ||||||||||||| |||||  ||||||| ||||||||||||||||    
T  17815050 attagatgcttgttctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactat 17814987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 21072264 - 21072358
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| |||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  21072264 agcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 21072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 13545536 - 13545627
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    |||||| |||| |||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||   ||||||||||||||||||||    
T  13545536 agcaacaactactttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccac 13545627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 219
Target Start/End: Complemental strand, 21660418 - 21660232
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagt 123  Q
    ||||||||||| |  |||||||  |||| |  |||| |||| |||||||||||||| | ||| || ||||||||||||| ||| ||||||  ||||||||    
T  21660418 atcaccagaagctacagttcatttggaaattgaactcaaagtttcaaaagctgtttcaaggactctaactcgtctaaagattgcagaagaccggaaaagt 21660319  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    || ||||| ||||||         ||  || |||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  21660318 atggcaacaactatt---------ttcaaatgcattggatgcttagtcctcaaagatcgttgacatagtatgtttgtacgaagtgtacaaccacta 21660232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 20551007 - 20550915
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| || ||||  |||||||||||||||| ||||| |||||||||||||| | |||  |||||||||||||||||||||||    
T  20551007 agcaacgactattttgaaaagatttgaaggcattggatgcttgttctttaaagagcgttgaca-aatacaattgtacgaagtgtacaaccacta 20550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 23391656 - 23391721
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  23391656 gcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactat 23391721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 19536325 - 19536419
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||| ||||| | |||||  || |||||||||| || |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  19536325 agcaacgacttttttgaatggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 19536419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5430123 - 5430044
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgttt 80  Q
    ||||||||| |||||||| | || ||||||||||| || ||||||||||||  |||||||||| ||||||||||||||||    
T  5430123 aagcaagttcatcagaaggtaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaggcttcaaaagctgttt 5430044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30115774 - 30115853
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgttt 80  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||| |||||    
T  30115774 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttt 30115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 642757 - 642825
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| || ||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  642757 aaggcattggatgcttgttttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 642825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 11208011 - 11208102
Alignment:
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||| |  ||||  || |||||||||||| |  |||||||||||||||||| ||||| | ||||||||||||| ||||||||    
T  11208011 gcaacgactattttgaagagatttgaatgcattggatgctcagccttcaaagagcgttgacaaagtac-tatgtacgaagtgtataaccacta 11208102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 9398644 - 9398689
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgtagttcatcag 49  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||    
T  9398644 caagttcatcagaagctcaagatcaccagaagttgaagttcatcag 9398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 6499302 - 6499258
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  6499302 aagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 6499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 9398784 - 9398852
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||| ||||||| | ||  ||||||||||||| |||||  |||||||||||||| |||||||||    
T  9398784 aaggcattgaatgcttactttttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactat 9398852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 12352869 - 12352913
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  12352869 aagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 12352913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 21072147 - 21072187
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcagga 51  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  21072147 atcagaagctgaagatcaccagaagctgaagttcatcagga 21072187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 23881154 - 23881086
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||  | ||  ||||||||||||| ||| |  ||||||||||||||||||||||||    
T  23881154 aaggcattggatgcttgctttttgaagagcgttgacaaagtgcaattgtacgaagtgtacaaccactat 23881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6517722 - 6517502
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  6517722 aagcaagttcatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttatttaaaggattcaaactcgtcta 6517623  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||||||||||||||||||||||||||  || ||||  |||||||||||||||||||||||||||||||||||||||    
T  6517622 aagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcatgagatgcttattcttcaaagagcgttgacatagtacgtttg 6517523  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  6517522 tacgaagtgtacaaccactat 6517502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10693088 - 10692869
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10693088 aagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtcta 10692989  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||  |||||| ||||||||| |||||||  |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  10692988 aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttg 10692889  T
Q  200 tacgaagtgtacaaccacta 219  Q
    || |||||||||||||||||    
T  10692888 tatgaagtgtacaaccacta 10692869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10906854 - 10906635
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10906854 aagcaagttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtcta 10906755  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||  |||||| ||||||||| |||||||  |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  10906754 aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttg 10906655  T
Q  200 tacgaagtgtacaaccacta 219  Q
    || |||||||||||||||||    
T  10906654 tatgaagtgtacaaccacta 10906635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 17398558 - 17398767
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||    ||||||||||| ||  |||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||| |||    
T  17398558 aagcaagttcatcagaagctatgaatcaccagaagctgcggttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgccta 17398657  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    || ||| |||||| |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17398658 aaattgcagaagactggaaaagtatagcaacgactattttg---------aaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 17398748  T
Q  201 acgaagtgtacaaccacta 219  Q
    |||||||||||||||||||    
T  17398749 acgaagtgtacaaccacta 17398767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 54680155 - 54679948
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| ||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||  |||||||||||||| | ||| ||    
T  54680155 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaatgg--tcaaactcgtctaatgattgcag 54680058  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| |||||||||  |||||| ||||||||| |||||||  ||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  54680057 aagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgt 54679958  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  54679957 acaaccacta 54679948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 3105323 - 3105513
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagca 129  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||  ||| |||||| |||||||||||  ||    
T  3105323 cagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgtctaagattgcagaagactggaaaagtattcca 3105422  T
Q  130 acgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| |||||||| |||||||  || | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3105423 acggctattttgaaaggattgaaaagtattggatggttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactat 3105513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 16940183 - 16940033
Alignment:
Q  70 aaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttat 169  Q
    |||||||| |||| ||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||    
T  16940183 aaaagctgcttaatggattcaaactcgtctaagattgcagaagactggaaaagtatagcaacgactattttgaaaggattgaaaggcattgaatgcttat 16940084  T
Q  170 tcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16940083 tcttcaaggagcgttgacatagtacgtttgtacgaagtgtacaaccactat 16940033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 413239 - 413021
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||  | ||||||||||||||||||| |||| || |||||||| ||||||||    
T  413239 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagattcaacttaaagcttcaaaagttgttcaatggattcaatctcgtcta 413140  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| | |||||||  ||||||| ||| |||| |||||||  ||||||||| ||| || |||||||||||||||||||| |||||| |||    
T  413139 agcattgcagaagactcgaaaagtgaagcaacggctaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagagcgttgacaaagtacgattg 413040  T
Q  200 tacgaagtgtacaaccact 218  Q
    |||||||||||||||||||    
T  413039 tacgaagtgtacaaccact 413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3483960 - 3483739
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| | ||  |||||  ||||||||||||||| || || || ||||| || ||||||    
T  3483960 aagcaagttcatcagaagctgaagatcaccagaagttatagttcattaagagatgcaagacttaaagcttcaaaaactattcaatggatttaatctcgtc 3483861  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| |||||||||  |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| |||||  |    
T  3483860 taagcattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaat 3483761  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||| | ||||||||||    
T  3483760 tgtacgaagcgcacaaccacta 3483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 29121554 - 29121388
Alignment:
Q  54 tgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattaca 152  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| |||||| || ||||||  |||||||||||||||| |||||||  |    
T  29121554 tgcaacttaaggcttcaaaagctgtttaatggattcaacctcgtctaaagattgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttga 29121455  T
Q  153 aggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  29121454 aggcactggatgcttgttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 29121388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19884940 - 19884719
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||||||||  |||||  |||||||||||||| | |||| |  ||||| || ||||||    
T  19884940 aagcaagttcatcagaagctgacaatcaccagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggatgttcat-ggatttaatctcgtc 19884842  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| |||||||||  ||||||||||| |||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |    
T  19884841 taagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaat 19884742  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  19884741 tgtacgaagtgtacaaccactat 19884719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 37435428 - 37435628
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||| ||   ||| |||||||||||    
T  37435428 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgcagaagattgga 37435527  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  37435528 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccact 37435627  T
Q  219 a 219  Q
    |    
T  37435628 a 37435628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 25651046 - 25651197
Alignment:
Q  69 caaaagctgtttaacggattcaaactcgtctaaagtt-gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgctt 167  Q
    |||||| ||||||||||||||||||| |||||||| | | |||||| | |||||||  ||||||| ||||||||||||||||  ||||||||| ||||||    
T  25651046 caaaagttgtttaacggattcaaacttgtctaaagatcgcagaagacttgaaaagtgaagcaacggctattttggaaggatttgaaggcattgaatgctt 25651145  T
Q  168 attcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  25651146 attcttcaaagagcgttgacgtagtacgtttgtacaaagtgtacaaccacta 25651197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17247480 - 17247263
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||  || | |||||||||||||||| |||| || |||||||| ||||||||    
T  17247480 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgaatcttaaagcttcaaaagttgttcaatggattcaatctcgtcta 17247381  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||||||| |||||  ||||||||||| |||| |||||||  ||||||||| ||| || ||||||||||| | |||||| |||||  |||    
T  17247380 agcattgcagaagattgg-aaagtgaagcaacgactaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagaacattgacaaagtacaattg 17247282  T
Q  200 tacgaagtgtacaaccact 218  Q
    |||||||||||||||||||    
T  17247281 tacgaagtgtacaaccact 17247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 9141092 - 9140929
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||  | |||| || |||||||| |||||||||   |||||||||| |||||||||| |||||||||||||||| |||||||  |||||    
T  9141092 acttaaagcttcaagggttgttcaatggattcaatctcgtctaagcattgtagaagactggaaaagtaaagcaacgactattttgaaaggatttgaaggc 9140993  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  9140992 attggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 9140929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 13575998 - 13576207
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| ||||||||||| || ||||||||||||  |||||| ||||||||||||  ||||| || ||||| || |||||||||   ||| ||    
T  13575998 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcag 13576097  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| ||||| |||  ||||||| ||| |||| |||||||  |||||||| ||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  13576098 aagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgt 13576197  T
Q  210 acaaccacta 219  Q
    | ||||||||    
T  13576198 aaaaccacta 13576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 3395829 - 3395607
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    |||||||||||||||||| |||||||||| ||||| | |||||||||||||  |||||  |||||| ||||||||| |||| || ||||| ||  |||||    
T  3395829 aagcaagtttatcagaagttgaagatcactagaagctatagttcatcaggagatgcaagacttaaatcttcaaaagttgttcaatggattaaatatcgtc 3395730  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||| | || ||||||  |||||||||||||||| |||||||  || ||||||||||||  |||||  |||||||||||||||||||  |    
T  3395729 taagcattgcagaaaactgaaaaagtgaagcaacgactattttgaaaggatttgaaagcattggatgctagttctttgaagagcgttgacatagtacaat 3395630  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  3395629 tgtacgaagtgtacaaccactat 3395607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8105876 - 8105655
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||||||||||||| | || ||||||||||||||  |||||| ||    |||||||||| |||||||||| ||||||| || ||||||  ||||||    
T  8105876 aagcaagtttatcagaagttaaaaatcaccagaagttgccgttcattagaggatgcaacttaaggcttcaaaagttgtttaatgggattcaacttcgtct 8105777  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | ||| |||||| ||||||| |  ||||||| |||||||| |||||||  || ||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  8105776 aaggattgcagaagactggaaaattgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 8105677  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    |||||||| |||||||||||||    
T  8105676 tgtacgaaatgtacaaccacta 8105655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 14904246 - 14904446
Alignment:
Q  19 ctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagatt 115  Q
    |||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||| || || ||||| || ||||||||    ||| |||||| |    
T  14904246 ctgaagatcaccagaagttgtagttcatcaggagatgcaagacctaaagcttcaaaagctattcaaaggatttaatctcgtctaggcattgcagaagact 14904345  T
Q  116 ggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacc 215  Q
    ||||||||  ||||||| | |||||| |||||||  ||| ||||||||||||||||||  |||||||||||||||||||  |||||||||||  ||||||    
T  14904346 ggaaaagtgaagcaacgtccattttgaaaggatttgaagacattggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtaaacaacc 14904445  T
Q  216 a 216  Q
    |    
T  14904446 a 14904446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 22675404 - 22675613
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    |||||||||  || ||| ||||||| || ||||||| ||||  |||||| |||||||||||| |||||| || ||||| || |||||||||   ||| ||    
T  22675404 atcagaagcaaaaaatccccagaagctgcagttcattaggagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 22675503  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| | |||||||  ||||||||||| |||| |||||||  |||||||| ||||||| |||||||||||||||||||| |||||  |||||| ||||||    
T  22675504 aagactagaaaagtgaagcaacgactagtttgaaaggatttgaaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgt 22675603  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  22675604 acaaccacta 22675613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 22191075 - 22190864
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagctt-caaaagctgtttaacggattcaaactcgtct 99  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||| || ||| ||||||||| || |||||||||||| | ||| || |||| |  |    
T  22191075 aagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaagaggtggaacttaaagttttcaaaagctgtttcaaggactctaacttgctt 22190976  T
Q  100 a-aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    | || ||| |||||| ||||||||||| ||||| ||||||||| || |         ||||||||||| |||||||||||||||||||||||||||||||    
T  22190975 agaaattgcagaagactggaaaagtatggcaacaactattttgaaatg---------cattggatgctgattcttcaaagagcgttgacatagtacgttt 22190885  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  22190884 gtacgaagtgtacaaccacta 22190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 45833623 - 45833411
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||| |||||||||||||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   |||     
T  45833623 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 45833524  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  ||||||  |||||||| ||| |||  || ||||||||||||| |||||  ||||||||||||| |||||  |||||||||||    
T  45833523 agaagactggaagagttaagcaacttctattttgaaagtatttgaatgcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagt 45833424  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  45833423 gtacaaccactat 45833411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 55732003 - 55731836
Alignment:
Q  14 agaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtagaag 112  Q
    |||||||||  |||||| |||| || ||||||||||||  ||||||||||| ||||||||| ||||||| |||||||||||||||||| | ||| | |||    
T  55732003 agaagctgagaatcaccggaagctgcagttcatcaggagatgcaacttaaaacttcaaaagttgtttaatggattcaaactcgtctaacaattgcaaaag 55731904  T
Q  113 attggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagc 181  Q
    | |||| | ||| | |||||||||||||| |||||||  |||| |||||||||||||||||||||||||    
T  55731903 actggagaggtaaatcaacgactattttgaaaggatttgaagg-attggatgcttattcttcaaagagc 55731836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 15475050 - 15475233
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagt 123  Q
    ||||||||||| |  ||||||||||||| |  |||| |||| |||||||||||||| | |||||  ||||||||||||| ||| |||||| | |||||||    
T  15475050 atcaccagaagctacagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaaggattttaactcgtctaaagattgcagaagagtagaaaagt 15475149  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacca 216  Q
    || |||||| |||||||| || |         ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  15475150 atggcaacggctattttgaaatg---------cattggatgcttactcctcaaagagcgttgacatagtacgtttatacgaagtgtacaacca 15475233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 12601281 - 12601118
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||| ||||| |||||| || ||||| || |||||||||   ||| |||||| | ||| |||  | |||||||||||||| |||||||  |||||    
T  12601281 acttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagacttgaatagtgaatcaacgactattttgaaaggatttgaaggc 12601182  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  12601181 attggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 12601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 29680426 - 29680631
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| | ||||| | |||||  |||||  ||||||||| |||| | |||| || ||||| || || ||||||   |||     
T  29680426 atcagaagctgaagatcaccagaagctctagtttaccaggagatgcaagacttaaagctccaaaggttgttcaatggatttaatcttgtctaagcattgc 29680525  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||  |||||||||||    
T  29680526 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagt 29680625  T
Q  208 gtacaa 213  Q
    ||||||    
T  29680626 gtacaa 29680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 14833625 - 14833449
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||| |||||||||||| ||||||||||  |||||  |||||||||||||| | |||| ||  ||||||| |||||||||   |||     
T  14833625 atcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgc 14833526  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgtt 184  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  || ||||||||||||| |||||  |||||||||    
T  14833525 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 14833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 19911762 - 19911974
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||  |||||||||| ||| | |||| ||  ||||||| |||||| ||   |||     
T  19911762 atcagaagctgaagatcatcagaagttgtagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatagattcaatctcgtccaagcattgc 19911861  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattc-ttcaaagagcgttgacatagtacgtttgtacgaag 206  Q
    | ||||   ||  |||  |||||||||||||||| |||||||  || ||||||||||||||||| || |||||||||||||||||||   |||||| |||    
T  19911862 aaaagaccagagcagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaag 19911961  T
Q  207 tgtacaaccacta 219  Q
    |||||||||||||    
T  19911962 tgtacaaccacta 19911974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 37985594 - 37985706
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || ||||||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  |||||||||||||||||||  |||||||||||    
T  37985594 agaagactgaaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagt 37985693  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  37985694 gtacaaccactat 37985706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 56532990 - 56533155
Alignment:
Q  57 aacttaaagcttcaaaagctgtttaacgg-attcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaag 154  Q
    ||||||| |||||||||||||||| | || |||||| ||||||||| | ||| |||||| || |||| |  ||||||| |||||||| |||||||  ||     
T  56532990 aacttaaggcttcaaaagctgttttatgggattcaacctcgtctaaggattgcagaagactgaaaaaatgaagcaacggctattttgaaaggatttgaat 56533089  T
Q  155 gcattggatgcttattcttcaaa-gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||| |||| || ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  56533090 gcattagatgtttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 56533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14571261 - 14571161
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||| |||    
T  14571261 aagcaagttcatcagaagctgtgaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgccta 14571162  T
Q  101 a 101  Q
    |    
T  14571161 a 14571161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 40860749 - 40860685
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  40860749 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgatgtgtacaaccacta 40860685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 19621061 - 19621155
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || ||||||||||||| ||||   |||||||||||||||||||  ||||||||||||||||||||||||    
T  19621061 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 19621155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 55380401 - 55380307
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| |||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  55380401 agcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 55380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 56034811 - 56034617
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  |||||||||||||| || |||||||||| |  |||||  ||||||||||||||  ||||| || ||||| || ||||||    
T  56034811 aagcaagttcatcagaagc--aagatcaccagaagctgaagttcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtc 56034714  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtac 194  Q
     ||   ||| |||||| ||||| |||  |||||||||||||||| ||  |||  ||||||||||||| || |||||||||||||||||||| |||||    
T  56034713 caagcattgcagaagactggaagagtgaagcaacgactattttgaaataatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtac 56034617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 16632658 - 16632458
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||| ||||| |  ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||| |||   ||| |||||| ||||    
T  16632658 aagatcactagaagctaaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactgga 16632559  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  | |||||||||||||| || ||||  |||||||||||| ||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  16632558 agagtgaatcaacgactattttgaaaagatttgaaggcattggattcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 16632459  T
Q  219 a 219  Q
    |    
T  16632458 a 16632458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 20977539 - 20977474
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20977539 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactat 20977474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 9751569 - 9751633
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  9751569 gcattggatgctaattcttcaaagagcgttgacatagtatgtttgcacgaagtgtacaaccacta 9751633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 38513960 - 38513896
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38513960 gcattggatgttaattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccacta 38513896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 10073161 - 10072952
Alignment:
Q  13 cagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagtt-gtag 109  Q
    ||||||||||| || ||||||||  ||||||||||||||  |||||  |||||||||||||| | |||| |  ||||| || ||||| |||   | | ||    
T  10073161 cagaagctgaaaattaccagaagcagtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcat-ggatttaatctcgtttaagcatagcag 10073063  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| |||||||||  ||||||  ||| |||| |||||||  ||||||||||| |||| || ||||||||||||||||| |||||   ||||||||||||    
T  10073062 aagactggaaaagtgaagcaactgctagtttgaaaggatttgaaggcattggaggcttgttattcaaagagcgttgacaaagtacaaatgtacgaagtgt 10072963  T
Q  210 acaaccactat 220  Q
    |||||||||||    
T  10072962 acaaccactat 10072952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 12811070 - 12811269
Alignment:
Q  21 gaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgg 117  Q
    ||||||||||||||| | |||||||| ||||  |||||  |||||||||||||| | |||| || ||||| |   ||||||||   ||| |||||| ||     
T  12811070 gaagatcaccagaagctctagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatggatttagtttcgtctaagcattgcagaagactga 12811169  T
Q  118 aaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    || |||  |||||||||||||||| |||||||  |||||||||||||||| ||||   || |||||||||| ||||   |||||||||||||||||||||    
T  12811170 aagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttct---aatagcgttgacaaagtaaaattgtacgaagtgtacaaccac 12811266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 27188667 - 27188732
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  27188667 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactat 27188732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16853720 - 16853620
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||||   ||||||| ||||||||||| ||||  |  |||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  16853720 aagcaagtttatcagaagctgtgaatcaccataagttgtagttgatcaaaagatgcaacttcaaggttcaaaagttgtttaacagattcaaactcgtcta 16853621  T
Q  101 a 101  Q
    |    
T  16853620 a 16853620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 39419764 - 39419827
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39419764 gcatttgatgctaattcttcaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccacta 39419827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 3499682 - 3499745
Alignment:
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3499682 cattggatgctatttcttcaatgagcgttgacatagtacatttgtacgaagtgtacaaccacta 3499745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 19666501 - 19666389
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  || |||||| || ||| |||||  ||||| ||||||| |||||  |||||||||||    
T  19666501 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattgaatacttgttctttgaagagagttgacaaagtacaattgtacgaagt 19666402  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  19666401 gtacaaccactat 19666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 14604837 - 14605000
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaa-ggattacaagg 155  Q
    ||||||||||||||| ||| ||  | |||||||| |||||||||   ||| |||||| | ||| |||  |||||| ||||||||  || |||||  || |    
T  14604837 acttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaaaggatttgaaag 14604936  T
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| |||||  ||||||||||||| |||||  |||||||||||||||||||||||    
T  14604937 cattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 14605000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3793360 - 3793287
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaag 74  Q
    ||||||||| | ||||||||||| ||||| ||||| || ||||||||||||  |||||||||||||||||||||    
T  3793360 aagcaagttcaccagaagctgaaaatcactagaagctgcagttcatcaggagatgcaacttaaagcttcaaaag 3793287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 16853585 - 16853521
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| ||| |||||||||||||||| ||||| | |||| |||||||||||||||||    
T  16853585 gcattggatgcttgttcctcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccacta 16853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 1672460 - 1672407
Alignment:
Q  166 ttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| ||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  1672460 ttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccacta 1672407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 1674935 - 1674882
Alignment:
Q  166 ttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| ||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  1674935 ttatccttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccacta 1674882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 6641778 - 6641702
Alignment:
Q  143 aaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||  |||||||| ||| ||| |||||  ||||||||||||| |||||  |||||||||||||||||||||||    
T  6641778 aaggatttgaaggcatttgatacttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 6641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 40846181 - 40846116
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||  | ||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  40846181 gcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 40846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 23123660 - 23123597
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaa 72  Q
    ||||||||| ||||||||||||||| || ||||||||||||  ||||  |||||||||||||||    
T  23123660 atcagaagcagaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaa 23123597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3499537 - 3499624
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaa 91  Q
    |||||||||||||||||||  ||| |||||||||| || || ||||||| |||  |||| || ||||||||||||||||| | ||||||||    
T  3499537 aagcaagtttatcagaagc--aagttcaccagaagctgcagatcatcag-aagatcaacctagagcttcaaaagctgtttcaaggattcaa 3499624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 11915811 - 11915720
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    ||||||||||||||   | |||||  ||||||||||||||||||||||  ||||||||||  | || ||  |||||| ||||||||||||||    
T  11915811 agcaacgactatttcaaatggatttgaaggcattggatgcttattctttgaagagcgttggaaaaggacaattgtacaaagtgtacaaccac 11915720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 14154022 - 14154085
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtac-gtttgtacgaagtgtacaaccac 217  Q
    ||||||||||||||| ||||||||| |||||| || ||||   |||||||||||||||||||||    
T  14154022 gcattggatgcttatacttcaaagaacgttgatattgtacaacttgtacgaagtgtacaaccac 14154085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 14153876 - 14153910
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaag 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  14153876 aagcaagttcatcagaagctgaagatcaccagaag 14153910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17700685 - 17700777
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcg 96  Q
    ||||||||| |||||||||  ||| |||||||||| || || ||||||| |||  |||| |||||||||||||| ||||| | |||||||| ||||    
T  17700685 aagcaagttcatcagaagc--aagttcaccagaagctgcagatcatcag-aagatcaacctaaagcttcaaaagttgtttcaaggattcaagctcg 17700777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29121596 - 29121556
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtag 41  Q
    ||||||||||||||||| || || |||||||||||||||||    
T  29121596 aagcaagtttatcagaatctaaaaatcaccagaagttgtag 29121556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 61046 - 60826
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  61046 aagcaagtttatcagaagttgagaatcaccagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagttgtttaaaggatttaaactcgtcta 60947  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||  ||| |||||| |||||||||||||||||| ||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  60946 aaaattgcagaagactggaaaagtatagcaacggctattttggaaggattggaaggcattgaatgcttgttcttcaaagagcgttgacatagtacgtttg 60847  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  60846 tacgaagtgtacaaccactat 60826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 34321799 - 34322019
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||| ||||| |||| ||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  34321799 aagcaagtttatcagaagctgagaatcactagaagctgtaattcatcaggagatgcaacttaaagcctcaaaagctgtttaaaggattcaaactcgtcta 34321898  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||  ||||||||||||||||||||||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  34321899 aagattgcagaagcctggaaaagtatagcaacgactattttgaaaggattgaaaggcattggattcttattcttcaaagagcgttgacatagtacgtttg 34321998  T
Q  200 tacgaagtgtacaaccactat 220  Q
    || ||||||||||||||||||    
T  34321999 tatgaagtgtacaaccactat 34322019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 33074463 - 33074243
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  33074463 aagcaagtttatcagaagctgagaatcactagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagctgtttaaaggattcaaactcgtcta 33074364  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||||||||||||||||||||  ||||  |||||||| ||||||||||||||||| | |||||||||| |||| |||    
T  33074363 aagattgcagaagactggaaaagtatagcaacgactattttggacagattggaaggcattagatgcttattcttcaaaaaacgttgacataatacgattg 33074264  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  33074263 tacgaagtgtacaaccactat 33074243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 35743865 - 35744083
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||||||  ||||||||||||| ||||||| |||||||| || ||||||  |||||    
T  35743865 aagcaagtttatcggaagctgaaaatcaccagaagctgtagttcatcaggagatgcaacttaaagcgtcaaaagttgtttaacagactcaaac--gtcta 35743962  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  35743963 aagattgcagaatattggaaaagtatagcaacgactattttggaaggatttgaaggcattgaatgctaattcttcaaagagcgttgacatagtacgtttg 35744062  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||| |||||||| |||||    
T  35744063 tacgaaatgtacaactactat 35744083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28550791 - 28551001
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  ||||| ||||| | ||||||||||||| | ||||||||||||| |||    
T  28550791 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaatttaaaacctcaaaagctgtttcaaggattcaaactcgccta 28550890  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    || ||| |||||| ||||||||||||| ||| ||||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  28550891 aaattgcagaagactggaaaagtatagaaacaactattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttgt 28550981  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  28550982 acgaagtgtacaaccactat 28551001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 28711560 - 28711780
Alignment:
Q  1 aagcaagtttatcagaagctgaaga-tcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtct 99  Q
    |||||||||||||||||||  || | |||||||||| || ||||||| | |   |||||||||| |||||||||||||||||| |||||||| || ||||    
T  28711560 aagcaagtttatcagaagccaaaaaatcaccagaagctgcagttcataatgggatgcaacttaaggcttcaaaagctgtttaatggattcaaccttgtct 28711659  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||| ||| |||||| |||||||||| |||||||||||||| | | | |||  |||||||||||||||| |||||||||||||||||| | |||||||||    
T  28711660 aaagattgcagaagactggaaaagtaaagcaacgactatttcgaatgaatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgttt 28711759  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  28711760 gtacgaagtgtacaaccacta 28711780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 1586908 - 1587116
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag 103  Q
    |||||| ||||||||||||  ||||||||||| || ||||||||||||  || |||||||||||||||||| ||||||| |||||||||||| ||| |||    
T  1586908 caagttcatcagaagctgagaatcaccagaagctggagttcatcaggagatggaacttaaagcttcaaaagttgtttaaaggattcaaactcatctgaag 1587007  T
Q  104 -ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 202  Q
     ||| |||||| || ||||||||  ||||| |||||||| ||||         ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1587008 attgcagaagactgaaaaagtattacaacggctattttgaaagg---------cattggatgctaattcttcaaagagcgttgacatagtacgtttgtac 1587098  T
Q  203 gaagtgtacaaccactat 220  Q
    ||||||||||||||||||    
T  1587099 gaagtgtacaaccactat 1587116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 22802658 - 22802478
Alignment:
Q  40 agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactatt 138  Q
    ||||||||||||  |||||||||||| |||||||||| ||||| |||||||||||||||||||| ||| |||||| | |||| ||| ||||| | |||||    
T  22802658 agttcatcaggagatgcaacttaaagattcaaaagctatttaatggattcaaactcgtctaaagattgcagaagactagaaaggtaaagcaatggctatt 22802559  T
Q  139 ttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| |||||||  |||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22802558 ttgaaaggatttgaaggcatatgatgcttattcttcaaagagagttgacaaagtacgtttgtacgaagtgtacaaccacta 22802478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31327828 - 31328048
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaa-gctgtttaacggattcaaactcgtct 99  Q
    |||||||||||||||||||||   ||||||||||| || ||||||||||||  |||||||||||| ||||||| | |||| |||||||||||||||| ||    
T  31327828 aagcaagtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaaagttgttcaacggattcaaactcgcct 31327927  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||| ||| |||||| | || ||||  |||||||||||||||||| || ||  || ||||||||||||| |||||||||||||||||||| |||| |||     
T  31327928 aaagattgcagaagactagagaagtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttc 31328027  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    | |||||||||||||||||||    
T  31328028 gaacgaagtgtacaaccacta 31328048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31334549 - 31334769
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaa-gctgtttaacggattcaaactcgtct 99  Q
    |||||||||||||||||||||   ||||||||||| || ||||||||||||  |||||||||||| ||||||| | |||| |||||||||||||||| ||    
T  31334549 aagcaagtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaaagttgttcaacggattcaaactcgcct 31334648  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||| ||| |||||| | || ||||  |||||||||||||||||| || ||  || ||||||||||||| |||||||||||||||||||| |||| |||     
T  31334649 aaagattgcagaagactagagaagtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttc 31334748  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    | |||||||||||||||||||    
T  31334749 gaacgaagtgtacaaccacta 31334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 22776190 - 22776371
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagca 129  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||| | || |||| ||||| ||||| ||| | |||| | |||||||||||||    
T  22776190 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcctaaaattgcaaaagacttgaaaagtatagca 22776289  T
Q  130 acgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| |||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22776290 acggctattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 22776371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 22781568 - 22781749
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagca 129  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||| | || |||| ||||| ||||| ||| | |||| | |||||||||||||    
T  22781568 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcctaaaattgcaaaagacttgaaaagtatagca 22781667  T
Q  130 acgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||| |||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781668 acggctattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 22781749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6392872 - 6392651
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacg-gattcaaactcgtct 99  Q
    |||||||||||||||||||| || ||||||| |||||| ||||||||||    |||| ||||| |||||||||||||||||| | ||||||| |||||||    
T  6392872 aagcaagtttatcagaagctaaaaatcaccataagttgcagttcatcagaggatgcatcttaaggcttcaaaagctgtttaatgtgattcaacctcgtct 6392773  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtt 197  Q
    || | ||| |||||| |||||||||  |||||||||||||||| |||||||  || ||||||||||||| ||| || |||||||||||||| ||||||||    
T  6392772 aaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 6392673  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    |||||||||||  |||||||||    
T  6392672 tgtacgaagtgcgcaaccacta 6392651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 45087045 - 45087266
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaa-gctgtttaacgg-attcaaactcgtc 98  Q
    |||||||||||||||||||| || ||||| ||||| |  ||||||||||    |||||||||||||||||||| | ||||||| || |||||| ||||||    
T  45087045 aagcaagtttatcagaagctaaatatcactagaagctacagttcatcagaggatgcaacttaaagcttcaaaaagttgtttaatgggattcaacctcgtc 45087144  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||| | ||| |||||| |||||||||  |||||||||||||||| |||||||  || ||||| ||||||||||||  |||||||||||||| ||||||||    
T  45087145 taaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaatgcattagatgcttattctcaaaagagcgttgacaaagtacgtt 45087244  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  45087245 tgtacgaagtgtacaaccacta 45087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22785528 - 22785738
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| |  ||||||||||||  ||||||||||||||||||||||| ||| | |  |||||||||| |||    
T  22785528 aagcaagttcatcagaagctgtgaatcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagctatttcaagatttcaaactcgccta 22785627  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    || ||| |||| | |||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22785628 aaattgcagaaaactggaaatgtatagcaacgactattttg---------aaaggcattggatgcttattcttcaaagagcgttgacatagtacttttgt 22785718  T
Q  201 acgaagtgtacaaccactat 220  Q
    || ||||||| |||||||||    
T  22785719 acaaagtgtataaccactat 22785738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 31967940 - 31968126
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagta 124  Q
    ||||||||||| || |||||||||| |  ||||||||||||| ||||||| ||||| | |||||||||||||  |||| ||| |||||| ||||||||||    
T  31967940 atcaccagaagctgcagttcatcagaagatgcaacttaaagcctcaaaagttgtttcaaggattcaaactcgcataaaattgcagaagactggaaaagta 31968039  T
Q  125 tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||| ||||||||| || |         ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31968040 tagcaacaactattttgaaatg---------cattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactat 31968126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40332315 - 40332105
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctg-tttaacggattcaaactcgtct 99  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  || |||  |||||||  ||||||| |||   ||||||||||||| ||    
T  40332315 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgtaacccaaagctttcaaagctgctttctaggattcaaactcgcct 40332216  T
Q  100 aaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||||||||| |||||||| ||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  40332215 aaaattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttg 40332125  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  40332124 tacgaagtgtacaaccacta 40332105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 28701094 - 28701308
Alignment:
Q  4 caagtttatcagaagctgaaga-tcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaa 102  Q
    ||||||||||||||||  || | |||||||||| || ||||||||| |   |||||||||| ||||||||||||||||||  ||||||| ||||||| ||    
T  28701094 caagtttatcagaagccaaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctgtttaatagattcaacctcgtcttaa 28701193  T
Q  103 g-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
    | ||| |||||| |||||||||| ||||||   ||||||| |||||||  |||||||||||||||| |||||||||| ||||||||| |||| |||||||    
T  28701194 gattgcagaagactggaaaagtaaagcaacagatattttgaaaggatttgaaggcattggatgcttgttcttcaaagggcgttgacaaagtaagtttgta 28701293  T
Q  202 cgaagtgtacaacca 216  Q
    |||||||||||||||    
T  28701294 cgaagtgtacaacca 28701308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 220
Target Start/End: Complemental strand, 44840631 - 44840451
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagca 129  Q
    |||||| || ||||||||| ||  ||||||||||||||||||||||||||| | ||||||||||||| ||||  ||| ||| || || |||||||| |||    
T  44840631 cagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgcctaacattgcaga-gactgaaaaagtatggca 44840533  T
Q  130 acgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44840532 acgactattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 44840451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 20151900 - 20152117
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac-ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaa 102  Q
    |||||| ||||||||||||| ||||||||||| || || |||||||||  |||||| ||||||||||||||| |||| || ||||| || |||||||||     
T  20151900 caagttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgcaacattaaagcttcaaaagttgttcaatggatttaatctcgtctaag 20151999  T
Q  103 g-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
      ||| |||||| |||||||||  |||||||  || |||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |||||    
T  20152000 cattgcagaagactggaaaagtgaagcaacggttagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgta 20152099  T
Q  202 cgaagtgtacaaccacta 219  Q
    ||||||||||||||||||    
T  20152100 cgaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 3277258 - 3277047
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||| ||||| || ||||||| ||||  || |||||||||||||||||| ||||||| | ||||||||| ||||     
T  3277258 aagcaagttcatcagaagctgggaatcactagaagctggagttcattaggagatggaacttaaagcttcaaaagttgtttaaagaattcaaacttgtctg 3277159  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| || ||||||||| ||||| ||| |||||||||         ||||||||||||||||||||||||||||||| ||||||||||||    
T  3277158 aagattgcagaagactgaaaaagtataacaacggctaatttggaagg---------cattggatgcttattcttcaaagagcgttgatatagtacgtttg 3277068  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  3277067 tacgaagtgtacaaccactat 3277047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 6573985 - 6574206
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||| |||||||| |||||||||| |  |||||| |||||||||||| | |||| ||  |||| || ||||||||    
T  6573985 aagcaagttcatcagaagctgaaaatcactagaagttgcagttcatcagaagatgcaacataaagcttcaaaggttgttcaattgatttaatctcgtcta 6574084  T
Q  101 aag--ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtac-gtt 197  Q
    | |  ||| |||||| |||||||||  ||||||||||| |||| |||||||  ||||||||||||| || |||||||||||||||||||| |||||   |    
T  6574085 atgcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaaat 6574184  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  6574185 tgtacgaagtgtacaaccacta 6574206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 23235236 - 23235024
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||| ||||||||||| | |||||||||| ||  |||||  |||||||||||||| |||||| || ||||| || |||||||||   |||     
T  23235236 atcagaagctgaaaatcaccagaagctctagttcatcatgagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 23235137  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||| |||||||||||||||| ||| |||  ||||||||||||||||||||||  ||||| ||||||| |||||  |||||||||||    
T  23235136 agaagactggaagagtaaagcaacgactattttgaaagaatttgaaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagt 23235037  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  23235036 gtacaaccactat 23235024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31800750 - 31800970
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||  |  ||||||||||  || ||||||||| |   |||||||||||||||||||||||| |||  |||| ||||||||||||    
T  31800750 aagcaagtttatcagaagcaaataatcaccagaaactgcagttcatcatgggatgcaacttaaagcttcaaaagctgcttagtggatccaaactcgtcta 31800849  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
        ||| |||||| |||||||||  | |||| ||||||||| |||||||  || |||||||||| ||  ||||||||||||||||||| ||||| ||||    
T  31800850 tttattgcagaagactggaaaagtgaaacaacaactattttgaaaggatttgaaagcattggatgtttgatcttcaaagagcgttgacaaagtacatttg 31800949  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  31800950 tacgaagtgtacaaccactat 31800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 14581671 - 14581532
Alignment:
Q  72 aagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattc 171  Q
    ||||||||| | ||||| ||||||| ||||| ||| |||||| ||||||| ||| ||||||||||||||| ||||         ||||||||||||||||    
T  14581671 aagctgtttcaaggattaaaactcgcctaaaattgcagaagactggaaaaatatggcaacgactattttgaaagg---------cattggatgcttattc 14581581  T
Q  172 ttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14581580 ttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 14581532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 22187973 - 22188185
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||||  |||||||||||||| |||||| || ||||| || |||||||||   |||     
T  22187973 atcagaagctgaagatcaccagaagttgaagttcatcaggacatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagtattgc 22188072  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  |||||| ||||||||| |  ||||  |||||||||||||||| |||||  ||||||||| ||| ||||   |||||||||||    
T  22188073 agaagactgaaagagtgaagcaacaactattttgaatagatttgaaggcattggatgcttgttctttgaagagcgttaacaaagtataattgtacgaagt 22188172  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  22188173 gtacaaccactat 22188185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 30557182 - 30557403
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    ||||||||| |||||||||| || ||||||||||| || ||||||||||    |||||||||| |||||||||  ||||||| || |||||| |||||||    
T  30557182 aagcaagttcatcagaagctaaatatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaaattgtttaatgggattcaacctcgtct 30557281  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | ||| ||| || || ||||||  |||| ||||||||||| ||| |||  ||  |||||||||||| ||| ||||| ||||||||||| ||||||||    
T  30557282 aaggattgcagaggactgaaaaagtgaagcatcgactattttgaaagaatttgaacacattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 30557381  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  30557382 tgtacgaagtgtacaaccacta 30557403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 30667218 - 30667006
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||  | ||||||||||||||||||||||  |||||   ||||||||||||| | |||| || ||||| || |||||||||   |||     
T  30667218 atcagaagctgaagaatatcagaagttgtagttcatcaggagatgcaagaattaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 30667119  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| | |  |||||||||||||||| |||||||  ||||||||||||||||  ||||  ||||||||||||| |||||  |||||||||||    
T  30667118 agaagactggaagaatgaagcaacgactattttgaaaggatttgaaggcattggatgcttgatctttgaagagcgttgacaaagtacaattgtacgaagt 30667019  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  30667018 gtacaaccactat 30667006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 20568632 - 20568833
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |||||||||||||||  |||||  |||||||||| ||| ||||||  | ||||| || |||||||||   ||| |||||| ||||    
T  20568632 aagatcaccagaagctgtagttcatcaggagatgcaagacttaaagctttaaaggctgttccatggatttaatctcgtctaagcattgcagaagactgga 20568731  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||| || |||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  20568732 agagtgaagcaacaacaattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 20568831  T
Q  219 at 220  Q
    ||    
T  20568832 at 20568833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 25829352 - 25829151
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |  ||||||||||||  |||||  |||| ||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||    
T  25829352 aagatcaccagaagctaaagttcatcaggagatgcaagacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactgga 25829253  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  25829252 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 25829153  T
Q  219 at 220  Q
    ||    
T  25829152 at 25829151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 38781626 - 38781417
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgt 107  Q
    ||||||||||||||||||||||||| |||   |||||||    |||||  |||||||||||||| | |||| ||  |||| || ||||||||||   |||    
T  38781626 atcagaagctgaagatcaccagaagatgtc--tcatcagaggatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaaacaatgt 38781529  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| |||||||||  |||||| ||||||||| |||||||  ||||||||| ||| || |||||||||||||||||||| |||||  |||||||||||    
T  38781528 agaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattgaatgattgttcttcaaagagcgttgacaaagtacaattgtacgaagt 38781429  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  38781428 gtacaaccacta 38781417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 13963839 - 13964061
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    |||||||||  ||||||| | |||||||| ||||| | ||||||||||| |  |||||   ||||||||||||| | |||| || ||||| || ||||||    
T  13963839 aagcaagttcctcagaagttaaagatcactagaagctctagttcatcagtagatgcaagatttaaagcttcaaaggttgttcaatggatttaatctcgtc 13963938  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   |||||||||| || || |||  |||||||||||||||| ||| |||  |||||||||||||||| |||||  ||||||||||||| |||||  |    
T  13963939 taagcattgtagaagactgaaagagtgaagcaacgactattttgaaagaatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaat 13964038  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  13964039 tgtacgaagtgtacaaccactat 13964061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 18376771 - 18376989
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcag--gaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaa 102  Q
    ||||| ||||||||| |||||||||||||||||| |||||||  |  || | |  ||||||||||||||| |||||| || ||||| || |||||||||     
T  18376771 aagttcatcagaagcagaagatcaccagaagttgaagttcatttgaagatgagagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaag 18376870  T
Q  103 g-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
      ||| ||||||||  || |||  | |||| ||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |||||    
T  18376871 cattgcagaagattttaatagtgaatcaactactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgta 18376970  T
Q  202 cgaagtgtacaaccactat 220  Q
    |||||||||||||||||||    
T  18376971 cgaagtgtacaaccactat 18376989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 25037130 - 25037342
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||| | |||| || |||||||| || ||| ||   |||     
T  25037130 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25037229  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||   | |||||||| |||| |||||||  || |||||||||| || |||||  || |||||||||| |||||  |||| ||||||    
T  25037230 agaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagt 25037329  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  25037330 gtacaaccactat 25037342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 25041237 - 25041449
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||| | |||| || |||||||| || ||| ||   |||     
T  25041237 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25041336  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||   | |||||||| |||| |||||||  || |||||||||| || |||||  || |||||||||| |||||  |||| ||||||    
T  25041337 agaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagt 25041436  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  25041437 gtacaaccactat 25041449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 22317833 - 22317611
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||  ||||||||||||| ||||||||||| | || ||||||| ||  |||||  |||||||||||||| ||| || |  ||||| || ||| ||    
T  22317833 aagcaagtacatcagaagctgaaaatcaccagaagctctatttcatcaagagatgcaagacttaaagcttcaaaggcttttcattggatttaatctcatc 22317734  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaa-ggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
    |||   ||| | |||| | ||| |||  ||||||||||||||| ||| |||||  |||||||||||||||| |||||||||||||||||||| |||||      
T  22317733 taagcattgcataagactagaagagtgaagcaacgactatttttgaaaggatttaaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaa 22317634  T
Q  197 ttgtacgaagtgtacaaccacta 219  Q
    ||||||||||| |||||||||||    
T  22317633 ttgtacgaagtatacaaccacta 22317611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 24377336 - 24377118
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgtctaa 101  Q
    ||||| |||||||||| |||||||||||||| || ||||||||| ||  |||||  |||||||||||||||| | ||| || ||||| || | || |||     
T  24377336 aagttcatcagaagctaaagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctag 24377237  T
Q  102 agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
      ||| ||||||   ||| |||  |||||||||||||||| |||| ||  |  ||||||||||||| |||||  |||||||||||||||||||  |||||    
T  24377236 cattgcagaagaccagaagagtgaagcaacgactattttgaaaggttttgagagcattggatgcttgttctttgaagagcgttgacatagtacaattgta 24377137  T
Q  202 cgaagtgtacaaccactat 220  Q
    |||||||||||||||||||    
T  24377136 cgaagtgtacaaccactat 24377118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 30621445 - 30621233
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||| ||||| |||||||||||| ||||||||  |||||   |||||| |||||| | |||| || ||||| || ||||| |||   |||     
T  30621445 atcagaagctgaatatcactagaagttgtagtgcatcaggagatgcaagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgc 30621346  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||| ||||||||||| |||||||  ||||||||||||| ||  ||||  ||||||||||||| |||||  |||||||||||    
T  30621345 agaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagt 30621246  T
Q  208 gtacaaccactat 220  Q
    ||| |||||||||    
T  30621245 gtaaaaccactat 30621233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 30624066 - 30623854
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||| ||||| |||||||||||| ||||||||  |||||   |||||| |||||| | |||| || ||||| || ||||| |||   |||     
T  30624066 atcagaagctgaatatcactagaagttgtagtgcatcaggagatgcaagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgc 30623967  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||| ||||||||||| |||||||  ||||||||||||| ||  ||||  ||||||||||||| |||||  |||||||||||    
T  30623966 agaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagt 30623867  T
Q  208 gtacaaccactat 220  Q
    ||| |||||||||    
T  30623866 gtaaaaccactat 30623854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 19540634 - 19540433
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||| ||  |||||  |||||||||||||| | |||| || ||||| || ||| |||||   ||| |||||| | |     
T  19540634 aagatcaccagaagctgaagttcatcatgagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcatctaagcattgcagaagactagg 19540535  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  ||||||| |||||| | |||| ||  |||| ||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  19540534 agagtgaagcaacggctatttcgaaaggttttgaaggtattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccact 19540435  T
Q  219 at 220  Q
    ||    
T  19540434 at 19540433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 22260625 - 22260432
Alignment:
Q  21 gaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgg 117  Q
    |||||||||||||||||  || |||||||||  |||||  |||||||| ||||||| |||| || ||||| || |||||||||   ||| |||||| |||    
T  22260625 gaagatcaccagaagttaaagctcatcaggagatgcaagacttaaagcgtcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactgg 22260526  T
Q  118 aaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtac 211  Q
    ||||||  |||||| | |||||||||||||||  |||| | ||||||||| |||||  |||||| ||||||||||||  ||||| |||||||||    
T  22260525 aaaagtgaagcaacaaatattttggaaggatttgaaggaactggatgcttgttctttgaagagctttgacatagtacaattgtaagaagtgtac 22260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 40782588 - 40782494
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || |||||||||| || |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  40782588 agcaacgactattttgaaaggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 40782494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 21537119 - 21537331
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||| | |||||||| ||||| || ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||| ||||  |||     
T  21537119 atcagaagttaaagatcactagaagatgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaaacattgc 21537218  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||||||   ||| |||  |||||||||||||||| |||| ||   |||||||||||||||  | ||  ||||||||||||| |||||  |||||||||||    
T  21537219 agaagaccagaagagtgaagcaacgactattttgaaaggttttggaggcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagt 21537318  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  21537319 gtacaaccactat 21537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 9015242 - 9015451
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||| ||||||  |  ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || || ||||||   |||     
T  9015242 atcagaagcagaagatc-ccagaaactaaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgc 9015340  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  | |||| ||||||||| |||||||  || |||||||||||||||||||  ||||||||||||| |||||  |||||||  ||    
T  9015341 agaagactggaagagtgaaacaacaactattttgaaaggatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gt 9015438  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  9015439 gtacaaccactat 9015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 10009739 - 10009833
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| |||||||  || ||||||||||||| |||||  |||| ||||||||||||||  ||||||||| ||||||||||||||    
T  10009739 agcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactat 10009833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 24576254 - 24576053
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaa-ctcgtctaaag-ttgtagaagattgg 117  Q
    |||||||||||||| |  ||||||| ||||  |||||  |||||||||||||| | |||| || ||||| ||| ||| |||||   ||| |||||| |||    
T  24576254 aagatcaccagaagctaaagttcattaggagatgcaatacttaaagcttcaaaggttgttcaatggatttaaatctcatctaagcattgcagaagactgg 24576155  T
Q  118 aaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccac 217  Q
    ||||||  |||||| ||||||||| |||||||  |||||||||| || || ||| |  ||||| ||||||| |||||  |||||||||||||||||||||    
T  24576154 aaaagtgaagcaacaactattttgaaaggatttaaaggcattggttgtttgttcgttgaagagagttgacaaagtacaattgtacgaagtgtacaaccac 24576055  T
Q  218 ta 219  Q
    ||    
T  24576054 ta 24576053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 24850655 - 24850748
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||||||| ||||||| ||| ||||||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||    
T  24850655 agcaacgaatattttgaaaggatttcaaagcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccacta 24850748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 1084235 - 1084142
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||||||| | ||||||||||  ||||||||||||| |  |||||| ||||  |||||| |||||||||| ||||||||||||||||||||    
T  1084235 atcagaagctgtatatcaccagaaactgtagttcatcagaagatgcaacctaaactttcaaatagctgtttaaaggattcaaactcgtctaaag 1084142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 24779454 - 24779360
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || |||| ||||| || |||||  ||||| |||||||||||||  ||||| |||||||| |||||||||    
T  24779454 agcaacgactattttgaaaggatttgaaagcatcggatgtttgttctttgaagagtgttgacatagtacaattgtatgaagtgtataaccactat 24779360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 28140608 - 28140702
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||||||||| |||||||  ||  |||||||||||| |||||  |||||||||||||||||||  |||||| |||||||| | ||||||    
T  28140608 agcaacaactattttgaaaggatttgaaaacattggatgcttgttctttgaagagcgttgacatagtacaattgtacaaagtgtaccatcactat 28140702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 23392686 - 23392750
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||  |  ||||||||||||||| ||||||   ||||||||||||||||||||||    
T  23392686 gcattggatgctttcttctcaaagagcgttgacctagtacaactgtacgaagtgtacaaccacta 23392750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 10009631 - 10009709
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    |||||||||||||| || ||||||||||||  ||||  ||||||||||||||  |||||| || |||||||| ||||||    
T  10009631 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtc 10009709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 39037681 - 39037724
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  39037681 aagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 1084091 - 1084049
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtac 194  Q
    |||||||| ||||||||| |||||||||||||||||| |||||    
T  1084091 aaggcattagatgcttatccttcaaagagcgttgacaaagtac 1084049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 22455005 - 22455069
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacca 216  Q
    ||||||||||||||||  | ||  || |||||||||| |||||  ||||||||||||||||||||    
T  22455005 aaggcattggatgcttgctttttgaaaagcgttgacaaagtacaattgtacgaagtgtacaacca 22455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 26619116 - 26619184
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||| ||||||||||||   ||| |||||| | || ||  ||||||||||||||||||||||||    
T  26619116 aaggcattgaatgcttattctttggagaacgttgaaaaaggacaattgtacgaagtgtacaaccactat 26619184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39037503 - 39037539
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagtt 37  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  39037503 aagcaagttcatcagaagctgaagatcaccggaagtt 39037539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 2265448 - 2265657
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||    
T  2265448 atcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacagattcaaactcgtctaaagattgcag 2265547  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| || ||||||||||||||| ||||||||||||||||  |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2265548 aagactgaaaaagtatagcaacggctattttggaaggatttgaaggtatttaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 2265647  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  2265648 acaaccacta 2265657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 15704445 - 15704620
Alignment:
Q  28 accagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtata 126  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  15704445 accagaagttgtagttcatcagaagatgaaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtata 15704544  T
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 202  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15704545 gcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 15704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35952606 - 35952826
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||    |||||||||| |||||||||||||||||| || |||||| |||||||    
T  35952606 aagcaagtttatcagaagctaaaaatcaccagaagttgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtct 35952705  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    || | ||| |||||| |||||||||  |||||||||||||||| |||||||  ||||||||||||| || ||| |||||||||||||||| |||||||||    
T  35952706 aaggattgaagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgtttgttcatcaaagagcgttgacaaagtacgttt 35952805  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  35952806 gtacgaagtgtacaaccacta 35952826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 14426757 - 14426567
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| || ||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| |||||| |||||||||  |||    
T  14426757 cagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttaatggattcaaactcatctaaagattgcagaagactggaaaagtgaagc 14426658  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  14426657 aacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccacta 14426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4821712 - 4821494
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||  |||||||||||| ||||||||||| || |||||||| |||  | ||||||||||||||||||||||||||||  |||||||||||||||    
T  4821712 aagcaagttcgtcagaagctgaaaatcaccagaagctgcagttcatccggagatacaacttaaagcttcaaaagctgtttaacaaattcaaactcgtcta 4821613  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||  |||||| | |||||||  ||||||| ||||||| ||| ||||  |||||||||||||||| |||||||||||||||||| | ||||||||||    
T  4821612 aagattacagaagactagaaaagtggagcaacggctatttt-gaaagatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttg 4821514  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  4821513 tacgaagtgtacaaccacta 4821494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 8183168 - 8182949
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| ||||||   ||||||||||| || ||||||||||||  ||||||| ||||||| ||||| ||| |||  | ||||||||||||||    
T  8183168 aagcaagttcatcaaaagctgtgaatcaccagaagctgcagttcatcaggagatgcaactcaaagcttaaaaagttgtataaaagtttcaaactcgtcta 8183069  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| ||||||||||||||||| ||||||||| |||||||  ||| || | |||||||||||||||||||||||||||||| ||||| |||    
T  8183068 agattgcagaagactggaaaagtatagcaacaactattttgaaaggattgaaagacacttgatgcttattcttcaaagagcgttgacataatacgtctgt 8182969  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  8182968 acgaagtgtacaaccactat 8182949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12174259 - 12174479
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||||||||||||||| || ||||||||||| || ||||||||||    |||||||||| |||||||||||||||| | || |||||| |||||||    
T  12174259 aagcaagtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaa-gcttcaaaagctgttttatgggattcaacctcgtct 12174357  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | ||| |||||| |||||||||  |||||||||||||||| |||||||  || ||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  12174358 aaggattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 12174457  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  12174458 tgtacgaagtgtacaaccacta 12174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 16542943 - 16543152
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag- 103  Q
    ||||| ||||||| ||||| ||||||| ||| || ||||||||||||  |||||| ||| |||||||||||||||||| |||||||||||||| ||| |     
T  16542943 aagttcatcagaaactgaaaatcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaatggattcaaactcgtttaatga 16543042  T
Q  104 ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg 203  Q
    ||| |||||| |||||||||  |||||||||||||||| || ||||  |||||||||||||||| |||||||||||||  ||||| ||||||||||||||    
T  16543043 ttgcagaagactggaaaagtgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttcaaagagctctgacaaagtacgtttgtacg 16543142  T
Q  204 aagtgtacaa 213  Q
    | ||||||||    
T  16543143 atgtgtacaa 16543152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 16622719 - 16622510
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag- 103  Q
    ||||| ||||||| ||||| ||||||| ||| || ||||||||||||  |||||| ||| |||||||||||||||||| |||||||||||||| ||| |     
T  16622719 aagttcatcagaaactgaaaatcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaatggattcaaactcgtttaatga 16622620  T
Q  104 ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg 203  Q
    ||| |||||| |||||||||  |||||||||||||||| || ||||  |||||||||||||||| |||||||||||||  ||||| ||||||||||||||    
T  16622619 ttgcagaagactggaaaagtgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttcaaagagctctgacaaagtacgtttgtacg 16622520  T
Q  204 aagtgtacaa 213  Q
    | ||||||||    
T  16622519 atgtgtacaa 16622510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 48062748 - 48062959
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||  |||||||||||   ||||||||||| || ||||||||| ||  ||||||||||||||||||||| ||||| | | ||||||||||| |||    
T  48062748 aagcaagtccatcagaagctgtgtatcaccagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagttgtttcaagaattcaaactcgccta 48062847  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || |||| ||||| ||||||||||| ||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  48062848 gaaattgtcgaagactggaaaagtatggcaacgactattttgaaagg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttg 48062938  T
Q  200 tacgaagtgtacaaccactat 220  Q
    ||||||| |||||||||||||    
T  48062939 tacgaagcgtacaaccactat 48062959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 48236821 - 48237040
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||  ||||||||||||||||||||| |||| || |||||||| ||||||||    
T  48236821 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttcaatggattcaatctcgtcta 48236920  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| | |||| || ||| ||  ||||||||| | |||| |||||||  |||||||  |||||||||||||||||||||||||||| |||||  |||    
T  48236921 agcattgcataagactgaaaaggtgaagcaacgacaagtttgaaaggatttgaaggcatcagatgcttattcttcaaagagcgttgacaaagtacaattg 48237020  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  48237021 tacgaagtgtacaaccacta 48237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 30944271 - 30944461
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| || ||||||||||||  ||||||||||||||||||| | |||| |||||||| || |||||||||   ||| ||||||||||||||||  |||    
T  30944271 cagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgcagaagattggaaaagtgaagc 30944370  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  30944371 aacaactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccacta 30944461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 30945304 - 30945494
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| || ||||||||||||  ||||||||||||||||||| | |||| |||||||| || |||||||||   ||||||||||||||||||||  |||    
T  30945304 cagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgtagaagattggaaaagtgaagc 30945403  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| ||||||||| |||||||  |||||||||||||||| ||| |||||||||||||||| |||||  |||||||||||||||||||||||    
T  30945404 aacaactattttgaaaggatttgaaggcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 30945494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 33605915 - 33605705
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaag-ctgtttaacggattcaaactcgtctaaagt-tgta 108  Q
    ||||||||||||| ||||||||||| || ||||||||||||  |||||| |||||||||||||| || || |||||||| || |||||||||    || |    
T  33605915 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaaaggcttttcaacggatttaatctcgtctaagcaatgca 33605816  T
Q  109 gaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtg 208  Q
    || || ||||||| |  ||||| |||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  33605815 gatgactggaaaattgaagcaatgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtg 33605716  T
Q  209 tacaaccacta 219  Q
    |||||||||||    
T  33605715 tacaaccacta 33605705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 14425651 - 14425466
Alignment:
Q  26 tcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtat 125  Q
    |||||||||| |  ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||| ||||  ||| |||||| |||| ||||||    
T  14425651 tcaccagaagctanagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaacattgcagaagactgganaagtat 14425552  T
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
     |||||| |||||||| || |         ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14425551 ggcaacggctattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactat 14425466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16111803 - 16112023
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||| ||||| | || ||||||||||| || |||| |||||    ||||||||||||||||||||| ||||| | |||||||| ||||||||    
T  16111803 aagcaagtttattagaagataaaaatcaccagaagctgcagttgatcagaggatgcaacttaaagcttcaaaagttgttttatggattcaacctcgtcta 16111902  T
Q  101 aagt-tgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |||  || ||||||  | ||||||  |||||||||| ||||||||| | |  |||||||||||||||| |||||||||||||||||||| |||||  |||    
T  16111903 aagagtgcagaagacggaaaaagtgaagcaacgacttttttggaagaaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattg 16112002  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  16112003 tacgaagtgtacaaccactat 16112023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19339178 - 19339388
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  |  ||||||||| ||||||| |||||| | ||| || |||||| |||    
T  19339178 aagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggagattgaacttaaagtttcaaaacctgtttcaaggactctaactcgccta 19339277  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||||| | ||||||||||||||| || |         ||||||||||||||||||||||||||||||||||||||||||||    
T  19339278 aagattgcagaagactggaaaagtgtggcaacgactattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttg 19339368  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  19339369 tacgaagtgtacaaccacta 19339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23279876 - 23280097
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    |||||||||  ||||||| |||| |||||||||||||||||||||||||||  |||||  |||||||||||||| ||| || |  ||||| || || |||    
T  23279876 aagcaagttcgtcagaaggtgaaaatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggctattcat-ggatttaatcttgtc 23279974  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   |||||||||| |||||||||  ||||||| ||| |||| |||||||  |||||||||||||||| |||||||||||||||||||| |||||  |    
T  23279975 taagcattgtagaagactggaaaagtggagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaat 23280074  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  23280075 tgtacgaagtgtacaaccactat 23280097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 27871949 - 27871738
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||| | ||||||||| ||  |||    
T  27871949 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggaaatgcaacttaaagcttcaaaagttgtttcaaggattcaaattcaccta 27871850  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaaga-gcgttgacatagtacgttt 198  Q
     || ||| |||||  ||||| ||||| |||||| |||||||| || |         |||||||||||||||||||||||| |||||||||||||||||||    
T  27871849 gaaattgcagaagtctggaatagtatggcaacggctattttgaaatg---------cattggatgcttattcttcaaagaagcgttgacatagtacgttt 27871759  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  27871758 gtacgaagtgtacaaccacta 27871738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 2913525 - 2913747
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||| |||||||||||||||  |||||||||||||||  |||||  |||||| ||||||| |||||| || | ||| || ||| ||    
T  2913525 aagcaagttcatcagaagatgaagatcaccagaaactgtagttcatcaggagatgcaagacttaaatcttcaaaggctgttcaatgaatttaatctcatc 2913624  T
Q  99 taaagt-tgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||||   || |||||| | |||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |    
T  2913625 taaacaatgcagaagactagaaaagtggagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaat 2913724  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  2913725 tgtacgaagtgtacaaccactat 2913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 44467306 - 44467084
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgt 97  Q
    ||||||||| ||||||||||||||||||||| ||| || ||||||||||||  |||||  |||||||||||||||| | ||| || ||||| || |||||    
T  44467306 aagcaagttcatcagaagctgaagatcaccaaaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgt 44467207  T
Q  98 ctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
    ||||   ||| |||||| | ||| |||  |||||||||||||||| |||||||  |||||||||||||||| ||||| |||||| ||||||| |||||      
T  44467206 ctaagcattgcagaagactagaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagtacaa 44467107  T
Q  197 ttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||||    
T  44467106 ttgtacgaagtgtacaaccacta 44467084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 9709731 - 9709940
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| ||||||||||| || ||||||||||||  |||||| ||||||||||||  ||||| || ||||| || |||||||||   ||| ||    
T  9709731 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcag 9709830  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| ||||| |||  ||||||| ||| |||| |||||||  |||||||| ||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  9709831 aagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgt 9709930  T
Q  210 acaaccacta 219  Q
    | ||||||||    
T  9709931 aaaaccacta 9709940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 21283311 - 21283511
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||||||||||||||| ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||    
T  21283311 aagatcaccagaagttgaagttcatcaggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgga 21283410  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||| ||||||| | |||||| |||||||  |||||||||||||||| || ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  21283411 agagtaaagcaacgtccattttgaaaggatttgaaggcattggatgcttgttattcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 21283510  T
Q  219 a 219  Q
    |    
T  21283511 a 21283511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 1293188 - 1293049
Alignment:
Q  72 aagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattc 171  Q
    ||||||||| | ||||||||||||| ||||| ||| | |||| ||||||||||||||||| ||||||||| ||||         ||||||||||||||||    
T  1293188 aagctgtttcaaggattcaaactcgactaaaattgcaaaagactggaaaagtatagcaacaactattttgaaagg---------cattggatgcttattc 1293098  T
Q  172 ttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1293097 ttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 1293049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15088761 - 15088539
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||| |||||||||||||||||||| | || ||||||||||  |||||  | |||||||||||| |||||| || ||||| || ||||||    
T  15088761 aagcaagttcatcataagctgaagatcaccagaagctctaattcatcaggagatgcaagacgtaaagcttcaaaggctgttcaatggatttaatctcgtc 15088662  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| || || |||  |||||||||||||||| |||||||  ||| |||||||||||| |||||  ||||||||||||| |||||  |    
T  15088661 taagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaagacattggatgcttgttcttttaagagcgttgacaaagtacaat 15088562  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  15088561 tgtacgaagtgtacaaccactat 15088539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 28622275 - 28622494
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| ||||| || ||||||||||| || ||||||||||||  ||||||||||||||||||||| |||| || |||||||| ||||||||    
T  28622275 aagcaagttcatcataagctaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttcaatggattcaatctcgtcta 28622374  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||| | | |||||||  ||||||| ||| |||| |||||||  ||||||||||||| || || ||||||| ||||||||| |||||  |||    
T  28622375 agcattgcagaatactagaaaagtgaagcaacggctaatttgaaaggatttgaaggcattggatgtttgtttttcaaagggcgttgacaaagtacaattg 28622474  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||| ||||||||||||||    
T  28622475 tacgaggtgtacaaccacta 28622494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 19710940 - 19711152
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaagtt-gta 108  Q
    ||||||| ||| | ||||||||||  ||||||||||||| |  |||||| ||||| |||||| |||||||||| ||||||||||||||||||||   ||     
T  19710940 atcagaaactgtatatcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtctaaagagagtg 19711039  T
Q  109 gaagattg--gaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaag 206  Q
     |||| ||  ||||||  | |||||||||| |||| |||||||  |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  19711040 aaagactgaagaaaagg-tggcaacgactaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcattgacaaagtacgtttgtacgaag 19711138  T
Q  207 tgtacaaccactat 220  Q
    ||||||||||||||    
T  19711139 tgtacaaccactat 19711152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 10883100 - 10883311
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgt- 107  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||  ||||||| |||||| | |||| || ||||| || |||||||||   | |     
T  10883100 atcagaagctgaagatcaccagaagctgtagttcatcaggagatgcaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaatcatttc 10883199  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  |||||||||||||| | |||||  ||||||||||||| |||||  |||||||||||    
T  10883200 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcctgttctttgaagagcgttgacaaagtacaattgtacgaagt 10883299  T
Q  208 gtacaaccacta 219  Q
    |||||| |||||    
T  10883300 gtacaatcacta 10883311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 9069800 - 9069582
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    |||||| ||||||||||||| ||||||||||| | || ||||||||||  |||||  |||||||||||||| | |||| || ||||| ||  ||||||||    
T  9069800 caagttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaagggatttaatatcgtctaa 9069701  T
Q  102 ag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
       ||| |||||| ||||| |||  |||||||||||||||| |||||||  ||||||||| |||||| |||||||| |||| |||||| |||||  ||||    
T  9069700 gcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttaaaggcattgtatgcttgttcttcaaggagcattgacaaagtacaattgt 9069601  T
Q  201 acgaagtgtacaaccacta 219  Q
    |||||||||||||||||||    
T  9069600 acgaagtgtacaaccacta 9069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 33691629 - 33691850
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| || ||||| |||| ||||||||||| | |||||||||||||  |||||  | |||||||||||| |||||| || ||||| || ||||||    
T  33691629 aagcaagttcattagaagttgaaaatcaccagaagctctagttcatcaggagatgcaagacataaagcttcaaaggctgttaaatggatttaatctcgtc 33691728  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| ||||| |||  |||||||||||||||| ||| |||  ||||| || ||||||| |||||||||||||||||||| |||||  |    
T  33691729 taagcattgcagaagactggaagagtgaagcaacgactattttgaaagaatttaaaggcgttagatgcttgttcttcaaagagcgttgacaaagtacaat 33691828  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| ||||||||    
T  33691829 tgtacgaagtgtataaccacta 33691850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 13880335 - 13880123
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||  ||||| | |||||||||||||| |||||  | |||||||||||| |||||| || ||| | || |||||||||   |||     
T  13880335 atcagaagctgaagatcatgagaagctctagttcatcaggaattgcaagacataaagcttcaaaggctgttcaatggacttaatctcgtctaagcattgc 13880236  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| | ||  |||  |||||||||||||||| |||||||  |||||||| |||||||||||||  ||||||||||||| |||||  |||||||||||    
T  13880235 agaagactcgacgagtgaagcaacgactattttgaaaggatttgaaggcattagatgcttattctttgaagagcgttgacaaagtacaattgtacgaagt 13880136  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  13880135 gtacaaccactat 13880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 21695642 - 21695424
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||| ||  ||||  ||||||||||||||||| |||| || ||||| || ||||||    
T  21695642 aagcaagttcatcagaagctgaagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaagttgttcaatggatttaatctcgtc 21695543  T
Q  99 taa-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| ||||||   ||| |||  ||||||||||||||   || ||||  |||||||||||||||| |||||  ||||||||||||| |||||  |    
T  21695542 taagcattgcagaagaccagaagagtgaagcaacgactatttcaaaatgatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaat 21695443  T
Q  198 tgtacgaagtgtacaacca 216  Q
    |||||||||||||||||||    
T  21695442 tgtacgaagtgtacaacca 21695424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 13303033 - 13302829
Alignment:
Q  19 ctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagatt 115  Q
    ||||||||||||||||| |||||||||| ||||  |||||  |||||||||||||| | |||| || ||||| ||  ||||||||   |||||||||| |    
T  13303033 ctgaagatcaccagaagctgtagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgtagaagact 13302934  T
Q  116 ggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacc 215  Q
     ||| |||  |||||||||||||||| |||||||  |||||||| ||||||| |||||  ||||||||||||| |||||  |||||| ||||||||||||    
T  13302933 agaagagtgaagcaacgactattttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaacc 13302834  T
Q  216 actat 220  Q
    |||||    
T  13302833 actat 13302829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 32264669 - 32264853
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aagttgtagaagattggaaaagt 123  Q
    ||||||||||| || ||||||||||||  ||| ||||||||||||||||| | ||| | ||||||||||||| ||| || ||| |||||| |||||||||    
T  32264669 atcaccagaagctgcagttcatcaggagatgcgacttaaagcttcaaaagttatttcaaggattcaaactcgcctagaaattgcagaagactggaaaagt 32264768  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaag-agcgttgacatagtacgtttgtacgaagtgtacaacca 216  Q
    || |||||| ||||||||          || |||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  32264769 atggcaacggctattttg---------aaatgcattggatgtttattcttcaaagaagcgttgacatagtacgtttgtacagagtgtacaacca 32264853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 15468147 - 15467939
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtcta---aagtt 105  Q
    |||||| ||||||||| |||||||| | |||||||||||||  |||||  |||||||||||||| | |||| ||  |||| || ||||||||   ||  |    
T  15468147 atcagatgctgaagattaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtctaggcaa--t 15468050  T
Q  106 gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaa 205  Q
    | |||||| ||||| |||  | |||||||||||||  |||||||  |||||||||||||||| |||||||||||||||||||| |||||  ||||||||     
T  15468049 gcagaagactggaagagtgaatcaacgactattttaaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgag 15467950  T
Q  206 gtgtacaacca 216  Q
    |||||||||||    
T  15467949 gtgtacaacca 15467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 29935403 - 29935497
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || ||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  29935403 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 29935497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2500279 - 2500059
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||||| |||||||||||| | | |||  ||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  2500279 aagcaagttcatcagaagctgaggatcaccagaagctcttgtttttcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtc 2500180  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| ||||| |||  |||||| ||||||||| |||||||  || ||||||||||||||| |||  ||||| ||||||| |||||  |    
T  2500179 taagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaagcattggatgcttatcctttgaagagagttgacaaagtacaat 2500080  T
Q  198 tgtacgaagtgtacaaccact 218  Q
    ||||| |||||||||||||||    
T  2500079 tgtacaaagtgtacaaccact 2500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 24794681 - 24794853
Alignment:
Q  40 agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aagttgtagaagattggaaaagtatagcaacgactatt 138  Q
    ||||||||||||| || |||| |||| |||||||| ||||| | ||| || |||||| ||| || ||| |||||| ||||||||||| |||||| |||||    
T  24794681 agttcatcaggaattggaactcaaagtttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacggctatt 24794780  T
Q  139 ttggaaggattacaaggcattggatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| || |         |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24794781 ttgaaatg---------cattggatgcttattcctcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 24794853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 13137827 - 13138034
Alignment:
Q  16 aagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaag 112  Q
    |||||||||||||||||||| | |||||||| ||||  |||||  |||||||||||||| | |  | || ||||| || |||||||||   ||| |||||    
T  13137827 aagctgaagatcaccagaagctctagttcataaggagatgcaagacttaaagcttcaaaggttaatcaatggatttaatctcgtctaagcattgcagaag 13137926  T
Q  113 attggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 212  Q
    | || || |||  |||||| ||||||||| || ||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||    
T  13137927 actgaaagagtgaagcaacaactattttgaaaagatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaca 13138026  T
Q  213 accactat 220  Q
    ||||||||    
T  13138027 accactat 13138034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 16316495 - 16316696
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtagaagattgga 118  Q
    ||||||||||||||||| |||||||||||   |||||  |||||||||||||| | |||| || ||||| || | ||||||| | ||| ||||||   ||    
T  16316495 aagatcaccagaagttgaagttcatcaggggatgcaagacttaaagcttcaaaggttgttcaatggatttaatcacgtctaagaattgcagaagaccaga 16316594  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  ||||||  |||||||| |||||||  ||| |||||||||||| |||||  ||||||||||| |||||||  ||||||||||||||||||||||    
T  16316595 agagtgaagcaacagctattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccact 16316694  T
Q  219 at 220  Q
    ||    
T  16316695 at 16316696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 22577959 - 22578159
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| ||  |||| || ||||| |||   ||| |||||| || |    
T  22577959 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtttaagcattgcagaagactgta 22578058  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||| ||||||||| |||||||  ||||||||| ||| || ||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  22578059 agagtgaagcaacaactattttgaaaggatttgaaggcattgaatgattgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 22578158  T
Q  219 a 219  Q
    |    
T  22578159 a 22578159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21381356 - 21381567
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||| |||| |||||||||||   ||||||||||| || ||||||||||||  |  |||||| || |||||||| ||||| | ||| || |||||| |||    
T  21381356 aagctagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgtttcaaggactctaactcgccta 21381455  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| ||||||||| | |||||| |||||||| || |         |||||||||| |||||||||||||||||||||||||||||| ||    
T  21381456 aagattgcagaagactggaaaagtgtggcaacggctattttgaaatg---------cattggatgcctattcttcaaagagcgttgacatagtacgtctg 21381546  T
Q  200 tacg-aagtgtacaaccacta 219  Q
    |||| || |||||||||||||    
T  21381547 tacgaaaatgtacaaccacta 21381567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 13648911 - 13648748
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||||| |||| || ||||| || | |||||||   ||| |||||| || || |||  ||||||| |||||||| |||||||  ||| |    
T  13648911 acttaaagcttcaaaagatgttcaatggatttaatcgcgtctaagcattgcagaagactgaaagagtgaagcaacggctattttgaaaggatttaaagac 13648812  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||  ||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  13648811 attggatgcttgatctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 13648748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 19237022 - 19237181
Alignment:
Q  60 ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcatt 159  Q
    ||||||||||||| |||||| || ||||| || ||||||||   ||| ||||||   ||| |||  ||||||| ||| |||| |||||||  ||||||||    
T  19237022 ttaaagcttcaaaggctgttcaaaggatttaatctcgtctagcattgcagaagaccagaagagtgaagcaacggctactttgaaaggatttgaaggcatt 19237121  T
Q  160 ggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| |||||||||||||||||||| | |||  || ||||||||||||||||||||    
T  19237122 ggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccacta 19237181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 28409214 - 28409059
Alignment:
Q  65 gcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggat 163  Q
    |||||||| | |||| || ||||| || ||||||||||  ||| |||||| | ||| |||  |||||| | ||||||| |||||||  ||||||||||||    
T  28409214 gcttcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactagaagagtgaagcaacaattattttgaaaggatttgaaggcattggat 28409115  T
Q  164 gcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    | || |||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  28409114 gtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 28409059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30026146 - 30025928
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||| ||  ||||  ||||||||||||||| |||| | || ||||| |  |||||     
T  30026146 aagcaagttcatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagacttaaagcttcaaacgctggtcaatggatttagtctcgta 30026047  T
Q  99 taa-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   | | |||||| || || |||  ||||||| |||||||| || || |  |||||||| ||||||| |||||  ||||||||||||| |||||  |    
T  30026046 taagcatcgcagaagactgaaagagtgaagcaacggctattttgaaaagaattgaaggcattcgatgcttgttcttttaagagcgttgacaaagtacaat 30025947  T
Q  198 tgtacgaagtgtacaacca 216  Q
    |||||||||||||||||||    
T  30025946 tgtacgaagtgtacaacca 30025928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 331881 - 331665
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca-acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag 103  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||||||  |||  ||||||||||||||| | ||||| | ||||||||  ||||| ||      
T  331881 aagttcatcagaagctgaagatcaccagaagctgaagtccatcaggagatgcggacttaaagcttcaaaggttgttttatggattcaaggtcgtccaagc 331782  T
Q  104 -ttgtagaagattggaaaagtatagcaacgactattttggaa-ggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
     ||| |||||| ||||| |||  ||||||  ||||||| ||| ||||   |||||||||||||||||||  ||||| |||||||||| |||||   ||||    
T  331781 attgcagaagactggaagagtgaagcaacagctatttttgaaaggatctgaaggcattggatgcttattgctcaaa-agcgttgacaaagtacaaatgta 331683  T
Q  202 cgaagtgtacaaccacta 219  Q
    ||||||||||||||||||    
T  331682 cgaagtgtacaaccacta 331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 12366690 - 12366886
Alignment:
Q  26 tcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaag 122  Q
    |||||||||| || |||||||||||| ||||||  |||||||||||||  |||||| || ||||| || ||||| |||   ||| |||||| ||| | ||    
T  12366690 tcaccagaagctgaagttcatcaggaggtgcaaaacttaaagcttcaagggctgttcaatggatttaatctcgtttaagcattgcagaagactgggagag 12366789  T
Q  123 tatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |  |||||| ||||||||| |||||||  || ||||||||||  | |||||  |||||||||||||||||||  ||||||||||| |||||||||||    
T  12366790 tgaagcaacaactattttgaaaggatttgaaagcattggatgtctgttctttgaagagcgttgacatagtacaattgtacgaagtatacaaccacta 12366886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 14193227 - 14193134
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| |||||||  ||||||||| |||||| |||||||||||||||| ||| |||||   ||||||||||||||||||||||    
T  14193227 agcaacgactattttgaaaggatttgaaggcattgaatgcttgttcttcaaagagcgttaacaaagtacaagtgtacgaagtgtacaaccacta 14193134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 16309961 - 16310046
Alignment:
Q  135 tattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||| |||||||  |||||||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  16309961 tattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 16310046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 5000867 - 5000961
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || |||||| |||||| |||||  |||| ||||||||||||||  ||||||||||||||||||||||||    
T  5000867 agcaacgactattttgaaaggatttgaaagcattgaatgcttgttctttgaagaacgttgacatagtacaattgtacgaagtgtacaaccactat 5000961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 11319636 - 11319424
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    ||||||||||||||||||||||||||||||| |||||| ||  ||||  |||| |||||||||| | |||| || ||||| || || ||||||   |||     
T  11319636 atcagaagctgaagatcaccagaagttgtaggtcatcaagagatgcaagacttcaagcttcaaaggatgttcaatggatttaatcttgtctaagcattgc 11319537  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  || ||| ||||||||| |||||||  || ||||||||||| | || ||  ||||||||||||| | |||  ||| |||||||    
T  11319536 agaagactgaaagagtgaagtaacaactattttgaaaggatttgaatgcattggatgcgtgttttttgaagagcgttgacaaattacaattgcacgaagt 11319437  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  11319436 gtacaaccactat 11319424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 21692400 - 21692307
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||| ||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||| |||||||||||||||||    
T  21692400 agcaacgactgttttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccacta 21692307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 24788254 - 24788161
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||||||| |||||||  |||||||||| ||||| ||||||||||||  |||||| |||||  |||||||||||||||||||||||    
T  24788254 agcaacgaatattttgaaaggatttgaaggcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccacta 24788161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 48805953 - 48806017
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  48805953 gcattggatgctatttcttcaaagagcgttgacatagtacgttcgtacaaagtgtacaaccacta 48806017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 11793020 - 11792926
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| ||| |||  || ||||| ||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  11793020 agcaacgactattttgaaagcatttgaaagcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 11792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 13730720 - 13730810
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacca 216  Q
    ||||||| |||||||| || ||||  || ||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||    
T  13730720 agcaacggctattttgaaaagatttgaatgcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacca 13730810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 16556665 - 16556755
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||||| |||||||||  ||||||| |||||||| |||||||  |||||||||  ||||| |||||||||||||||||| | |||||||||    
T  16556665 agaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttcaaagagcgttgaaaaagtacgttt 16556755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 16608997 - 16608907
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    |||||| |||||||||  ||||||| |||||||| |||||||  |||||||||  ||||| |||||||||||||||||| | |||||||||    
T  16608997 agaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttcaaagagcgttgaaaaagtacgttt 16608907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 7339821 - 7339893
Alignment:
Q  29 ccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    ||||||| || ||||||||||||  ||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  7339821 ccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaaattgtttaatggatttaaactcgtctaa 7339893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 39284635 - 39284702
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| || |||||  ||||||||||||| |||||  |||||||||||||||||||||||    
T  39284635 aaggcattggatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39284702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 13260689 - 13260754
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| |||||  |||||| |||| |||||||  ||||||||||||||||||||||||    
T  13260689 gcattggatgcttgttcttggaagagcattgagatagtacaattgtacgaagtgtacaaccactat 13260754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 4412036 - 4412100
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||| |  ||||||||||||||||| || ||| |||||||| |||||||||||||    
T  4412036 gcattggatgcttaattctcaaagagcgttgacattgtgcgtctgtacgaactgtacaaccacta 4412100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 13018600 - 13018644
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  13018600 aagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 13018644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39284482 - 39284530
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcag 49  Q
    ||||||||| ||||||||||||||||||||||||| || || |||||||    
T  39284482 aagcaagttcatcagaagctgaagatcaccagaagctgaagatcatcag 39284530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 41842348 - 41842411
Alignment:
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||| || || |||| ||||||||| |||||  |||||||||||||||||||||||    
T  41842348 cattggatacttgttttttaaagtgcgttgacagagtacaattgtacgaagtgtacaaccacta 41842411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 13692434 - 13692372
Alignment:
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    ||||||||||||  |||| | |||| ||||||| |||||  ||||||||||||||||||||||    
T  13692434 cattggatgcttgatctttatagagtgttgacaaagtacaattgtacgaagtgtacaaccact 13692372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4411890 - 4412015
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| || |||||||||||   ||||||||||| || |||||||| |||  |  ||||||||| |||||||||||||| | ||| || |||||| |||    
T  4411890 aagcaaattcatcagaagctgtttatcaccagaagctgcagttcatctggagattgaacttaaagtttcaaaagctgtttcaaggactctaactcgccta 4411989  T
Q  101 -aagttgtagaagattggaaaagtat 125  Q
     || ||| |||||| |||| ||||||    
T  4411990 gaaattgcagaagactggagaagtat 4412015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4429006 - 4429107
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| || |||||||||||   ||||||||||| || |||||||| |||  |  ||||||||| |||||||||||||| | ||| || |||||| |||    
T  4429006 aagcaaattcatcagaagctgtttatcaccagaagctgcagttcatctggagattgaacttaaagtttcaaaagctgtttcaaggactctaactcgccta 4429105  T
Q  101 aa 102  Q
    ||    
T  4429106 aa 4429107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 11793138 - 11793046
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    |||||||||| |||||||||||||| || ||||||||||||  ||||  ||||||||||| ||| | |||| || ||| | || |||||||||    
T  11793138 atcagaagctaaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcgtctaa 11793046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 13032167 - 13032211
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| ||||   ||||||||||||||||||||||||    
T  13032167 aagagcgttgacaaagtataattgtacgaagtgtacaaccactat 13032211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 14955669 - 14955450
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||  || |||| ||||||||||||||||||||| |||||||||||||||||    
T  14955669 aagcaagtttatcagaagctgagaatcaccagaagttgcagttcatcaggagatgtaactcaaagcttcaaaagctgtttaatggattcaaactcgtcta 14955570  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||| ||| |||||| ||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14955569 aagattgcagaagactggaaaggtaaagcaacaactattttgaaagtatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttg 14955470  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  14955469 tacgaagtgtacaaccacta 14955450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21641108 - 21640889
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||| | ||||||||||||| |||    
T  21641108 aagcaagttcatcagaagctgtgaatcaccagaagttgcagttcatcaggagatgcaacttaaagcctcaaaagctgtttcaaggattcaaactcgccta 21641009  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  |||||||||| |||||||||||||||||| ||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||| |    
T  21641008 agattgtagaagactggaaaagtatagcaacggctattttggaaggattgaaaagcattggatgcttatttttcaaagagcgttgacatagtacgttttt 21640909  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  21640908 acgaagtgtacaaccactat 21640889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 2785307 - 2785087
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2785307 aagcaagtttattagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtcta 2785208  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgttt 198  Q
    ||| ||| |||||| |||||||||  |||||| ||||||||| |||||||  || ||||||||||||| ||| || ||||||||||||||||||||||||    
T  2785207 aagattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgttt 2785108  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  2785107 gtacgaagtgtacaaccacta 2785087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 24775452 - 24775670
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgt--agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    ||||||||||| |||||||  ||||||||||| ||   ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24775452 caagtttatcacaagctgagaatcaccagaagctgcgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 24775551  T
Q  102 ag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    || ||| |||||| |||||||||  |||||| ||||||||| |||||||  ||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  24775552 agattgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattgaatgcttattcttcaaagagctttgacaaagtacgtttgt 24775651  T
Q  201 acgaagtgtacaaccacta 219  Q
    |||||||||||||||||||    
T  24775652 acgaagtgtacaaccacta 24775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 5213789 - 5213600
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  5213789 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtataaagattgcagaagactggaaaagtatagc 5213690  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| |||||||||||||||||  |||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5213689 aacaactattttggaaggatttgaaggcattagatgcttattattcaaa-agcgttgacgtagtacgtttgtacgaagtgtacaaccacta 5213600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 20627358 - 20627567
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||| | ||| ||    
T  20627358 atcagaagctgaaaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagatgtttaatggattcaaactcgtctaatgattgcag 20627457  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| |||||||||  |||||| ||||||||| | |||||  |||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||    
T  20627458 aagactggaaaagtgaagcaacaactattttgaatggatttgaaggcattggatgcttgtttatcaaagagcgttgacaaagtacgtttgtacgaagtgt 20627557  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  20627558 acaaccacta 20627567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 53056647 - 53056863
Alignment:
Q  4 caagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||||||||||||  || ||||| ||||| || ||||||||| |   |||||||||| | |||||||||||||||| ||||||||  ||||||||||    
T  53056647 caagtttatcagaagccaaaaatcactagaagctgcagttcatcatgggatgcaacttaaggtttcaaaagctgtttaatggattcaacatcgtctaaag 53056746  T
Q  104 -ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 202  Q
     ||| |||||| |||||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  53056747 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtac 53056846  T
Q  203 gaagtgtacaaccacta 219  Q
    |||||||||||||||||    
T  53056847 gaagtgtacaaccacta 53056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21636596 - 21636806
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||| | ||||||||||||  || |||||||||||||||||||||||| | ||| || |||||| |||    
T  21636596 aagcaagttcatcagaagctgtgtatcaccagaagtggcagttcatcaggagttggaacttaaagcttcaaaagctgtttcaaggactctaactcgccta 21636695  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| ||||||||||| ||||||||||||||| || |         ||||||||||||||||||||||||||||||||||||||||||||    
T  21636696 gaaattgcagaagactggaaaagtatggcaacgactattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttg 21636786  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  21636787 tacgaagtgtacaaccacta 21636806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 46796294 - 46796504
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||| ||||| || ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  46796294 aagcaagttcatcagaagctgtgaatcacaagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtcta 46796393  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |||||||||||  ||||| ||| ||||          |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  46796394 agattgcagaagactggaaaagtattacaacggctaatttg---------aaaggcattagatacttattcttcaaagagcgttgacatagtacgtttgt 46796484  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  46796485 acgaagtgtacaaccactat 46796504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 11223805 - 11223585
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||| ||||| |||||||||||  | ||||||||||||  | ||||||  |||||||||||||||| || || ||||| ||||||||    
T  11223805 aagcaagttcatcagaatctgaaaatcaccagaagcagcagttcatcaggagatacaactttgagcttcaaaagctgttcaatgggttcaatctcgtcta 11223706  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
        ||| |||||| || ||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| |||| |||||    
T  11223705 tgcattgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtatgtttg 11223606  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  11223605 tacgaagtgtacaaccactat 11223585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 33583473 - 33583252
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacgg-attcaaactcgtct 99  Q
    |||||||| ||||||||||| || ||||||| |||||||||||||||||    |||||||||| |||||||||| ||||| | || |||||| || ||||    
T  33583473 aagcaagtctatcagaagctaaaaatcaccaaaagttgtagttcatcagaggatgcaacttaaggcttcaaaagttgttttatgggattcaaccttgtct 33583374  T
Q  100 aaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa-gagcgttgacatagtacgtt 197  Q
    || | |||||||||| |||||||||  ||||||| |||||||| |||||||  || ||||||||||||| ||| ||||| ||||||||||| ||||||||    
T  33583373 aaggattgtagaagactggaaaagtgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtt 33583274  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  33583273 tgtacgaagtgtacaaccacta 33583252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 14969571 - 14969349
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||| |||||||||||||||||| | |||||||| ||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  14969571 aagcaagttcatcagatgctgaagatcaccagaagctctagttcatgaggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtc 14969472  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| ||||| |||| |||||| ||||||||| |||||||  | |||||||||||||||||||||||| |||||||||| ||||| ||    
T  14969471 taagcattgcagaagactggaagagtaaagcaacaactattttgaaaggatttgatggcattggatgcttattcttcaaatagcgttgacaaagtacatt 14969372  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    | |||||||||||||||||||||    
T  14969371 tttacgaagtgtacaaccactat 14969349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 47207939 - 47207729
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag--ttgta 108  Q
    ||||||||||||| ||||||||||| || ||||||||||||  |||||| |||| ||||||| | |||| || ||||| || |||||||||||  ||| |    
T  47207939 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaaacttcaaaggttgttcaatggatttaatctcgtctaaagcattgca 47207840  T
Q  109 gaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtg 208  Q
    ||||| |||||||||  ||||||| ||| |||| || ||||  |||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||    
T  47207839 gaagactggaaaagtgaagcaacggctagtttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtg 47207740  T
Q  209 tacaaccacta 219  Q
    |||||||||||    
T  47207739 tacaaccacta 47207729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 49666356 - 49666542
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagta 124  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||||||||  ||| |||||| ||||||||||    
T  49666356 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgtctaagattgcagaagactggaaaagta 49666455  T
Q  125 tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    || |||||||||||||| |||||||  ||| ||         ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  49666456 taacaacgactattttgaaaggattgaaagaca---------tattcttcaaagagcattgacatattacgtttgtacgaagtgtacaaccactat 49666542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21605580 - 21605791
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||| ||   |||||||||||||| ||||||||||||  || |||||||||||||||||| ||||| | ||| || |||||| |||    
T  21605580 aagcaagttcatcagaagttgtgtatcaccagaagttgcagttcatcaggagatggaacttaaagcttcaaaagttgtttcaaggactctaactcgccta 21605679  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| |||||||||||  |||||||||||||| || |         ||||||||||||||||||||||||||||||||||| ||||||||    
T  21605680 gaaattgcagaagactggaaaagtatgacaacgactattttgaaatg---------cattggatgcttattcttcaaagagcgttgacataatacgtttg 21605770  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  21605771 tacgaagtgtacaaccactat 21605791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 46349761 - 46349979
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| || |||||||||| |||||||||||||| ||||||||||||   |||||||||  ||||||||| |||| ||  ||| ||| ||||||||    
T  46349761 aagcaagttcattagaagctgaaaatcaccagaagttgcagttcatcaggagaagcaacttaagacttcaaaagttgttcaattgatccaatctcgtcta 46349860  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||| |||||| |||||||||  ||||||||||| |||| |||||||  |||||||||||||||| ||||||| ||| | |||||| |||||| |||    
T  46349861 agcattgcagaagactggaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttcttcagagaacattgacaaagtacgattg 46349960  T
Q  200 tacgaagtgtacaaccact 218  Q
    |||||||||||||||||||    
T  46349961 tacgaagtgtacaaccact 46349979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40851201 - 40850991
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||| ||   ||||||||||| |  ||||||||||||  || ||||||||||||||||||||| || | ||| || |||||| |||    
T  40851201 aagcaagttcatcagaagttgtgtatcaccagaagctacagttcatcaggagatggaacttaaagcttcaaaagctggttcaaggactctaactcgccta 40851102  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| ||||||||||| ||||||||||||||| || |         |||||||||||||||||||||||||||||||||||||| |||||    
T  40851101 gaaattgcagaagactggaaaagtatggcaacgactattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtatgtttg 40851011  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  40851010 tacgaagtgtacaaccacta 40850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28582350 - 28582129
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||  || |||||||||| ||||||||||| | || ||||||||||  |||||  |||||||||||||| |||||| || ||||| || ||||||    
T  28582350 aagcaagtacattagaagctgaaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtc 28582251  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    ||    ||| |||||||||||| |||  |||||||||||||||| |||||||  | |||||||||||||| |||||||||||||||||||| | |||  |    
T  28582250 tatgcattgcagaagattggaagagtgaagcaacgactattttgaaaggatttaatggcattggatgcttgttcttcaaagagcgttgacaaaatacaat 28582151  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  28582150 tgtacgaagtgtacaaccacta 28582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 49642690 - 49642899
Alignment:
Q  14 agaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtaga 110  Q
    ||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||| | |||| ||  |||| || |||||||||   ||| |||    
T  49642690 agaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcaga 49642789  T
Q  111 agattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgta 210  Q
    ||| ||||| |||  |||||||||||||||| |||||||  ||||||||||||| || |||||  ||||||||||||| |||||  |||||| |||||||    
T  49642790 agactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgattgttcttttaagagcgttgacaaagtacaattgtacaaagtgta 49642889  T
Q  211 caaccactat 220  Q
    ||||||||||    
T  49642890 caaccactat 49642899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 22140967 - 22140787
Alignment:
Q  40 agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactatt 138  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||||||||||||| |||| | ||| |||||| | || ||||  | |||||||||||    
T  22140967 agttcatcaggagatgcaacttaaagtttcaaaagctgttcaacggattcaaactcgcctaaggattgcagaagactagataagtgaaccaacgactatt 22140868  T
Q  139 ttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| | || ||  ||  |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22140867 ttgaagggttttgaaaacattggatgcttgttcttcaaagagcgttgacatagtacgtatgtacgaagtgtataaccacta 22140787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 29855652 - 29855432
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||| |||||  || ||||||| ||  || ||||||||| |   ||||||||||  ||||||||||||||||| |||||||| ||||||||    
T  29855652 aagcaagtttatcggaagccaaaaatcaccaaaacctgcagttcatcatgggatgcaacttaagacttcaaaagctgtttaatggattcaacctcgtcta 29855553  T
Q  101 aag-ttgtagaagattggaaaa-gtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 198  Q
    ||| ||| |||||| |  |||| ||  ||||||| ||| |||| ||| |||  |||||||||||||||| ||||||||| |||||||||| |||||||||    
T  29855552 aagattgcagaagactaaaaaaagtgaagcaacggctagtttgaaagaatttgaaggcattggatgcttgttcttcaaaaagcgttgacagagtacgttt 29855453  T
Q  199 gtacgaagtgtacaaccacta 219  Q
    |||||||||||||||||||||    
T  29855452 gtacgaagtgtacaaccacta 29855432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 40800106 - 40799897
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| ||||||||||| || ||||||||| ||  |||| | |||||||||||| |||||| || ||||| || |||||||||   ||| ||    
T  40800106 atcagaagctgaaaatcaccagaagctgcagttcatcaagagatgcatcataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 40800007  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| ||||||||   ||||||||||| |||| ||| |||  |||| ||||||| ||| |||||||||||||||||||| |||||  |||||||||||||    
T  40800006 aagactggaaaagcgaagcaacgactagtttgaaagtatttgaaggaattggatacttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgt 40799907  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  40799906 acaaccacta 40799897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 47405348 - 47405557
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    ||||||||||||| ||||||||||| || ||||||||| ||  |||||| |||||||||||| |||||| || ||||| || |||||||||   ||| ||    
T  47405348 atcagaagctgaaaatcaccagaagctgcagttcatcacgagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 47405447  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| ||||||| |  |||||| |||| |||| |||||||  |||||||| |||| || |||||||||||| ||||||| |||||  |||||||||||||    
T  47405448 aagactggaaaaatgaagcaacaactagtttgaaaggatttgaaggcatttgatgtttgttcttcaaagagtgttgacaaagtacaattgtacgaagtgt 47405547  T
Q  210 acaaccacta 219  Q
    ||||||||||    
T  47405548 acaaccacta 47405557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 30054143 - 30054353
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||  |  ||||||||||||  ||||| | ||||||||||||||||||| | | ||||||||||| |||    
T  30054143 aagcaagttcatcagaagctgtgaatcaccagaaacttcagttcatcaggagatgcaattcaaagcttcaaaagctgtttcaagaattcaaactcgccta 30054242  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttg 199  Q
    || ||| |||||| | |||||||||||||||||||| ||||          |||||||||| |||||||||  | |||||||||||||||||||||||||    
T  30054243 aaattgcagaagacttgaaaagtatagcaacgactactttg---------aaaggcattgggtgcttattcaacaaaagagcgttgacatagtacgtttg 30054333  T
Q  200 tacgaagtgtacaaccacta 219  Q
    |||||| |||||||||||||    
T  30054334 tacgaaatgtacaaccacta 30054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 2561432 - 2561211
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||  ||||||||||| | |||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  2561432 aagcaagttcatcagaagctgagaatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtc 2561333  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| ||||| |||  |||||| ||||||||| |||||||  |||  ||||||||||| ||||||||||| |||||||| |||||       
T  2561332 taagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaagaaattggatgcttgttcttcaaagatcgttgacaaagtacaag 2561233  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  2561232 tgtacgaagtgtacaaccacta 2561211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 18121537 - 18121758
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||| ||||| |||||||||||||| | |||||||||||||  |||||   ||||||||||||| | |||| || |||||||| |||||     
T  18121537 aagcaagttcatcataagctaaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggttgttcaatggattcaatctcgtt 18121636  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    | |   ||| |||||| ||||| |||  |||||| ||||||||| |||||||  ||||||||| |||||| |||||||||||||||| ||| |||||  |    
T  18121637 tgagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaat 18121736  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  18121737 tgtacgaagtgtacaaccacta 18121758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 13948570 - 13948362
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| |  || |||||||||  |||||  |||||||| ||||| | |||| ||  |||| || |||||||||   |||     
T  13948570 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 13948471  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  |||||||||||||||| |||||  |||||||||||||||||||  |||||||||||    
T  13948470 agaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagt 13948371  T
Q  208 gtacaacca 216  Q
    |||||||||    
T  13948370 gtacaacca 13948362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 20646389 - 20646177
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaag-ctgtttaacggattcaaactcgtctaaag-ttg 106  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||  |||||||||| ||||| ||||| || | |||  | |||||| ||   |||    
T  20646389 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagctttaaaaggctgttcaatgtatttcatctcgtccaagcattg 20646290  T
Q  107 tagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaag 206  Q
    |||||||   ||| |||  ||||||| |||||||| |||||||  || ||||||||||||| |||||  |||||||||||||||||||  ||||||||||    
T  20646289 tagaagaccagaagagtgaagcaacgtctattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaag 20646190  T
Q  207 tgtacaaccacta 219  Q
    |||||||||||||    
T  20646189 tgtacaaccacta 20646177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 37467556 - 37467355
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||||||||||||  ||||||||||||||  |||||  |||||| |||||||   |||| || ||||| || ||| |||||   |||||||||| ||||    
T  37467556 aagatcaccagaagcagtagttcatcaggagatgcaaaacttaaatcttcaaagcttgttcaatggatttaatctcatctaagcattgtagaagactgga 37467457  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||||||||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||    
T  37467456 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 37467357  T
Q  219 at 220  Q
    ||    
T  37467356 at 37467355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 220
Target Start/End: Complemental strand, 41495179 - 41495021
Alignment:
Q  63 aagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattgg 161  Q
    |||||||||| |||||| || ||||| || ||||||||||  ||| |||||| ||||| |||  |||||||||||||||| |||||||  ||||||||||    
T  41495179 aagcttcaaaggctgttcaatggatttaatctcgtctaaacattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 41495080  T
Q  162 atgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  41495079 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 41495021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 11869310 - 11869130
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||| || ||||||||||||| ||||||||||| || |||||||||||   |||||||||| |||||||||  ||||||| | |||||| ||||||||    
T  11869310 aagcaatttcatcagaagctgaaaatcaccagaagctgcagttcatcaggggatgcaacttaaggcttcaaaatttgtttaatgaattcaatctcgtcta 11869211  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagag 180  Q
    | |  |  |||||| |||||||||  ||||||| ||| |||| |||||||  |||||||||||||||| ||||||||||||    
T  11869210 agaaatacagaagactggaaaagtgaagcaacgtctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagag 11869130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12963002 - 12963222
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||  |||||  |||||||||||||  | |||| || ||||| || || |||    
T  12963002 aagcaagttcatcagaagc--aagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaagggttgttcaagggatttaatcttgtc 12963099  T
Q  99 taaagt-tgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||    || |||||| ||| | |||  |||||| |||||||| ||||| ||  || ||||||||||||| |||||  ||||| |||||||||||||  |    
T  12963100 taagcaatgcagaagactgggagagtgaagcaacaactattttagaaggttttgaaagcattggatgcttgttctttgaagagtgttgacatagtacaat 12963199  T
Q  198 tgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||||    
T  12963200 tgtacgaagtgtacaaccactat 12963222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 16658543 - 16658754
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||| | |||| ||  ||||||| |||||| ||   ||      
T  16658543 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttgaaacttcaaaggttgttcaattgattcaatctcgtccaagcattac 16658642  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    | ||||   ||  |||  |||||||||||||||| |||||||  || |||||||||||||||||||  ||||||||||||||| |||  |||||||||||    
T  16658643 aaaagaccagagcagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagt 16658742  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  16658743 gtacaaccacta 16658754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 38177568 - 38177779
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgt 107  Q
    ||||||||| |||||||| |||||| | ||||| || ||||  |||||  |||||||||||||| | |||| || | ||| || ||||||| |    ||     
T  38177568 atcagaagcagaagatcatcagaagctctagtttattaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctgagcaatgc 38177667  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||||||||| |||  |||||| ||||||||| |||||||  |||||||||||||||| ||||| |||||||||||||| |||||  |||||||||||    
T  38177668 agaagattggaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagt 38177767  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  38177768 gtacaaccacta 38177779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 13824254 - 13824092
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagt-tgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||| | |||| || ||||| || ||||||||||   || |||||| ||||| |||  |||||| ||||||||| || ||||  |||||    
T  13824254 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacaatgaagaagactggaagagtgaagcaacaactattttgaaatgatttgaaggc 13824155  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| || |||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  13824154 attggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 49553425 - 49553625
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||||||||||||  | ||||||||||||  |||||  ||||||| |||||| |||||||||  |||| ||  ||||||||   ||| ||||||||| |    
T  49553425 aagatcaccagaagccgaagttcatcaggagatgcaagacttaaagtttcaaaggctgtttaatagatttaacatcgtctaagcattgcagaagattgaa 49553524  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  ||||  |||||||||| |||||||  ||||||||||||| || ||||||| |||||||||||| |||||  ||||||||||||||||||||||    
T  49553525 agagtgaagcagtgactattttgaaaggatttgaaggcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccact 49553624  T
Q  219 a 219  Q
    |    
T  49553625 a 49553625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 15903433 - 15903220
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    ||||||||||||||||||||| ||| |||| || |||||||  |||||  |||||||||||||| |||||| || |||||||| |||||||||   ||      
T  15903433 atcagaagctgaagatcaccaaaagctgtaatttatcaggagatgcaagacttaaagcttcaaacgctgttcaatggattcaatctcgtctaagcattac 15903334  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgc-ttattcttcaaagagcgttgacatagtacgtttgtacgaag 206  Q
    |||||| | ||| |||  |||||||||||||||| |||||||  || |||||| |||| || |||||  |||||| |||||| |||||  ||||||||||    
T  15903333 agaagactagaagagtgaagcaacgactattttgaaaggatttgaaagcattgcatgctttgttctttgaagagcattgacaaagtacaattgtacgaag 15903234  T
Q  207 tgtacaaccactat 220  Q
    |||||||| |||||    
T  15903233 tgtacaacaactat 15903220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 12726166 - 12726366
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagtt-gtagaagattgga 118  Q
    |||||||| |||||||| ||||||||||||  | |||  |||||||||||||| ||| || || |||||||| |||||||||  || | |||||| | ||    
T  12726166 aagatcacaagaagttgaagttcatcaggagattcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactaga 12726265  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  || ||||||||||||| |||||||  || |||||||||||||| |||| |||||| ||| ||| |||||  |||||| |||||||||||||||    
T  12726266 agagtgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccact 12726365  T
Q  219 a 219  Q
    |    
T  12726366 a 12726366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 18142696 - 18142888
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtata 126  Q
    |||||| | |||||||||||||  |||||   ||||||||||||| ||| || || |||||||| ||||| | |   ||| |||||| ||||| |||  |    
T  18142696 cagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctattcaatggattcaatctcgtttgagcattgcagaagactggaagagtgaa 18142795  T
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||| ||||||||| |||||||  ||||||||| |||||| |||||||||||||||| ||| |||||  |||||||||||||||||||||||    
T  18142796 gcaacaactattttgaaaggatttaaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccacta 18142888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 13780627 - 13780721
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  |||||||||||||||| || ||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  13780627 agcaacgactattttgaaaggatttgaaggcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 13780721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 6090966 - 6090755
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||||||||||| || ||||||||||||  |||||  |||||| ||||||| | || | || ||||| || |||||||||   |||     
T  6090966 atcagaagcagaagatcaccagaagctgaagttcatcaggagatgcaagacttaaaacttcaaaggttgctcaatggatttaatctcgtctaagcattgc 6090867  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| | ||| |||  ||||||  ||| |||| |||||||  ||||||||| |||||| ||||| ||| ||| |||||| |||||  |||||||||||    
T  6090866 agaagactagaagagtgaagcaacatctaatttgaaaggatttgaaggcattgaatgcttgttctttaaaaagctttgacaaagtacaattgtacgaagt 6090767  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  6090766 gtacaaccacta 6090755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 14393049 - 14393141
Alignment:
Q  128 caacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||| |||||||  || ||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||||||||||    
T  14393049 caacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 14393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 16032639 - 16032548
Alignment:
Q  128 caacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||| |||||||  |||||||||||||||| |||||  |||||| |||||| |||||  |||||||||||||||||||||||    
T  16032639 caacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccacta 16032548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 29951361 - 29951575
Alignment:
Q  9 ttatcagaagctgaagatcaccagaagttgtagttcatcag--gaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-tt 105  Q
    ||||||||||||||||||||| ||||| || ||||||||||  || | |  ||||||||||||||| | | || || ||||| || |||||||||   ||    
T  29951361 ttatcagaagctgaagatcactagaagctgaagttcatcagaagacgagagacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcatt 29951460  T
Q  106 gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaa 205  Q
    ||||||||   ||  |||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  ||||| ||| ||| |||||  |||||| ||    
T  29951461 gtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaa 29951560  T
Q  206 gtgtacaaccactat 220  Q
    |||||||||||||||    
T  29951561 gtgtacaaccactat 29951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 30000515 - 30000729
Alignment:
Q  9 ttatcagaagctgaagatcaccagaagttgtagttcatcag--gaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-tt 105  Q
    ||||||||||||||||||||| ||||| || ||||||||||  || | |  ||||||||||||||| | | || || ||||| || |||||||||   ||    
T  30000515 ttatcagaagctgaagatcactagaagctgaagttcatcagaagacgagagacttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcatt 30000614  T
Q  106 gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaa 205  Q
    ||||||||   ||  |||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  ||||| ||| ||| |||||  |||||| ||    
T  30000615 gtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaa 30000714  T
Q  206 gtgtacaaccactat 220  Q
    |||||||||||||||    
T  30000715 gtgtacaaccactat 30000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 9700108 - 9700173
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  9700108 gcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactat 9700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 11909079 - 11909160
Alignment:
Q  138 tttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| |||||||  |||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||| |||||||    
T  11909079 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctttacgaagtgtacgaccacta 11909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 52920639 - 52920429
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    ||||||||||||||||||||||||| || ||||||||||||  ||||  |||||||| |||||| |||| | || ||||| || |||||||||   |||     
T  52920639 atcagaagctgaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggctgctcaatggatttaatctcgtctaagcattgc 52920540  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| | ||| |||  |||||| |||| |||  ||| |||  |||||||| ||||||| ||||| |||||||||||||| | ||   |||||||||||    
T  52920539 agaagactagaagagtgaagcaacaactaattt-aaagtatttgaaggcatttgatgcttgttctttaaagagcgttgacaaattaaaattgtacgaagt 52920441  T
Q  208 gtacaaccacta 219  Q
     |||||||||||    
T  52920440 atacaaccacta 52920429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 45858804 - 45858875
Alignment:
Q  138 tttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    |||| |||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  45858804 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgt 45858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 17238858 - 17239059
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||| ||| ||||  |||||  |||||||||||||| |||| | || ||||| || |||||||||   ||| ||||||   ||    
T  17238858 aagatcaccagaagatgaagtgcataaggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccaga 17238957  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||| ||||||||||| |||||||  || |||||||||| || |||||  || |||||||||| |||||  ||||||||||||||||||||||    
T  17238958 agagtgaagcatcgactattttgaaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccact 17239057  T
Q  219 at 220  Q
    ||    
T  17239058 at 17239059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 1728087 - 1728152
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| || | |||||||||| |||||||||||||||||||||||||||    
T  1728087 gcattggatgcttattcctcaaggaacattgacatagtgcgtttgtacgaagtgtacaaccactat 1728152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 25398298 - 25398391
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| |||||||  ||||||||| ||  ||  ||||||||||||||||||| || ||  |||||||||||||||||||||||    
T  25398298 agcaacgactattttgaaaggatttgaaggcattgcatatttgctcttcaaagagcgttgacaaagcacaattgtacgaagtgtacaaccacta 25398391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 19888988 - 19889082
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||||| |||||||  || ||||||||||||| |||||  || ||  |||||||| |||  ||||||||||||||||||||||||    
T  19888988 agcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaataggattgacatattacaattgtacgaagtgtacaaccactat 19889082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 31303620 - 31303408
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| | |||||  ||||||  || ||  |||||||||| ||| | |||| || | ||| || |||||||||   |||     
T  31303620 atcagaagctgaagatcaccagaagctctagttactcaggagatgaaagacttaaagctttaaaggttgttcaatgaatttaatctcgtctaagcattgc 31303521  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  || ||| ||||||||| |||||||  ||| |||| |||| || |||||  ||||||||||||| |||||  |||||||||||    
T  31303520 agaagactgaaagagtgaaggaacaactattttgaaaggatttgaagacatttgatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagt 31303421  T
Q  208 gtacaaccactat 220  Q
    ||||||| |||||    
T  31303420 gtacaacaactat 31303408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 50300290 - 50300246
Alignment:
Q  175 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  50300290 aaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 50300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33598093 - 33598014
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgttt 80  Q
    |||||||| ||||||||||| || ||||||| |||||||||||||||||    |||||||||| |||||||||| |||||    
T  33598093 aagcaagtctatcagaagctaaaaatcaccaaaagttgtagttcatcagaggatgcaacttaaggcttcaaaagttgttt 33598014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 11868338 - 11868292
Alignment:
Q  173 tcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  11868338 tcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccacta 11868292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 12752544 - 12752646
Alignment:
Q  2 agcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtcta 100  Q
    ||||||| |||||||||||| | | ||||||||  |||| |||||||| |  |||||| ||||| |||||| || ||||||| |||||||||||||||||    
T  12752544 agcaagtctatcagaagctgtataacaccagaaactgtaattcatcagaagatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtcta 12752643  T
Q  101 aag 103  Q
    |||    
T  12752644 aag 12752646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 22804066 - 22804160
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||| |||||||| ||||| |  |||||||| |||| || |||||  ||||||||||||| |||||  |||||||||||||| |||||||||    
T  22804066 agcaacggctattttgaaaggacttgaaggcattcgatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactat 22804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 12388941 - 12389008
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||||||| |||||  |||||||||| || || ||  |||||||||||||||||||||||    
T  12388941 aaggcattggatgcttcttctttgaagagcgttggcaaaggacaattgtacgaagtgtacaaccacta 12389008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 51341093 - 51341050
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacg 195  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  51341093 aaggcattggatgcttatccttcaaagagcgttgacaaagtacg 51341050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 23538235 - 23538303
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||| |||||||||||| | ||| |||||| | || ||  ||||||||||||||||||||||||    
T  23538235 aaggcattgaatgcttattctttagagaacgttgaaaaaggacaattgtacgaagtgtacaaccactat 23538303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1727942 - 1728037
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcg 96  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  |  |||||| || |||||||| ||||| | |||||||| ||||    
T  1727942 aagcaagttcatcagaagctgtgtatcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgtttcaaggattcaatctcg 1728037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 19249472 - 19249547
Alignment:
Q  143 aaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    |||||||  ||||||||||||| || |||||  ||||||| ||| |||| ||  ||||||||||||||||||||||    
T  19249472 aaggatttgaaggcattggatgtttgttctttgaagagcgctgaaataggacaattgtacgaagtgtacaaccact 19249547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 45858673 - 45858760
Alignment:
Q  10 tatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcg 96  Q
    |||||||||| | | ||||||||||  ||||||||||||| |  |||||| ||||| |||||| |||||||||| ||||| |||||||    
T  45858673 tatcagaagcagtatatcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagctgtttaatggatttaaactcg 45858760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 12752697 - 12752739
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtac 194  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  12752697 aaggcattggatacttatccttcaaagagcgttgacaaagtac 12752739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 11908977 - 11909042
Alignment:
Q  39 tagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||||||| |  |||||| ||||| |||||| || ||||||| ||||||||||||||||||||    
T  11908977 tagttcatcagaagatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtctaaag 11909042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 37412692 - 37412627
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||| || |  | ||| |||||||| || |||||||||||| ||||||||||||||    
T  37412692 gcattggatgcttaatcctataggagagttgacattgtgcgtttgtacgaaatgtacaaccactat 37412627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 51341236 - 51341143
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||||||| | ||||| ||||  ||||||||||||| |  |||||| ||||| |||| | || ||||||| |||||||| |||||||||||    
T  51341236 atcagaagctgtatatcactagaaactgtagttcatcagaagatgcaacctaaagtttcatatagttgtttaatggattcaacctcgtctaaag 51341143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 512537 - 512493
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttca 45  Q
    ||||||||| |||| |||||||||||||||||||| || ||||||    
T  512537 aagcaagttcatcataagctgaagatcaccagaagctgaagttca 512493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 7024 - 7244
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| | |||||||||| |||||     
T  7024 aagcaagttcatcagaagctgtgaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttgaaggattcaaacccgtctg 7123  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| | ||||||||| |||||||||    
T  7124 aagattgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcattggatgcttattcttcaaacaacgttgacatggtacgtttg 7223  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  7224 tacgaagtgtacaaccactat 7244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 6608 - 6827
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6608 aagcaagtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaacttgtcta 6707  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    | | ||| |||||| |||||||||  |||| ||||||||||| || ||||  |||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  6708 aggattgcagaagactggaaaagtgaagcaccgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcattgacaaagtacgtttg 6807  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  6808 tacgaagtgtacaaccacta 6827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21999 - 22219
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    |||||||||||||||||||||   |||||||||||||||||||||| || |  |||||||||||| |||||||| ||||||| ||||| |||||||||||    
T  21999 aagcaagtttatcagaagctgtgaatcaccagaagttgtagttcattagaagatgcaacttaaaggttcaaaagttgtttaaaggattaaaactcgtcta 22098  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||| |||||||||||||||||| || ||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22099 aagattgcagaagactggagaagtatagcaacgactatctttgaaggattggaaggcattggatgcttattcttcaatgagcgttgacataatacgtttg 22198  T
Q  200 tacgaagtgtacaaccactat 220  Q
    |||||||||||||||||||||    
T  22199 tacgaagtgtacaaccactat 22219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9802 - 9583
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| ||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||| |||||    
T  9802 aagcaagttcatcataagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaacttgtcta 9703  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| ||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||| |||| |||||||||||||||||  |||    
T  9702 agattgcagaagactgggaaagtatagcaacgactattttgaaaggattgaagggcattggatgcttattctacaaacagcgttgacatagtacgactgt 9603  T
Q  201 acgaagtgtacaaccactat 220  Q
    ||||||||||||||||||||    
T  9602 acgaagtgtacaaccactat 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 19276 - 19055
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    |||||||||||||||||| |||||||||||||||| | || |||||||||   | |||  |||||||||| ||| |||||| || ||||| || ||||||    
T  19276 aagcaagtttatcagaagttgaagatcaccagaagctctatttcatcaggtgatacaagacttaaagcttgaaaggctgttcaatggatttaatctcgtc 19177  T
Q  99 taaag--ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
     ||||  ||| |||||| ||||| |||  ||||||| ||||||||||||||||  |||||||| ||||||| |||||||||||||||||  | |||||      
T  19176 -aaagcattgcagaagactggaagagtgaagcaacggctattttggaaggatttaaaggcatttgatgcttgttcttcaaagagcgttggaaaagtacaa 19078  T
Q  197 ttgtacgaagtgtacaaccacta 219  Q
     ||||||||||||||||||||||    
T  19077 gtgtacgaagtgtacaaccacta 19055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 78234 - 78453
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||| ||||  ||||||||||| |||||||||||| ||  |||| |||||||||||||||||| |||| ||||||||||||||||||    
T  78234 aagcaagttcatcagaatctgagaatcaccagaagctgtagttcatcatgagatgcagcttaaagcttcaaaagctatttatcggattcaaactcgtcta 78333  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| |||||||||  |||||||||||||||| |||||||  |||||||||||||||||||||| |||||||||||||| ||||||||||    
T  78334 aagattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattctttaaagagcgttgacaaagtacgtttg 78433  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  78434 tacgaagtgtacaaccacta 78453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 215365 - 215584
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||||||||||||| ||| ||||||||||| || |||| |||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  215365 aagcaagtttatcagaagccgaaaatcaccagaagctgcagtttatcaggagatgcaacttaaaacttcaaaagctgtttaatggattcaaactcgtcta 215464  T
Q  101 aag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    ||| ||| |||||| | |||||||  ||||||| |||||||| |||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  215465 aagattgcagaagactagaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttg 215564  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  215565 tacgaagtgtacaaccacta 215584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 123; Significance: 2e-63; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 211612 - 211422
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| ||||| |||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  211612 cagaagctgtagctcatcaggagatgcagcttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtatagc 211513  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  211512 aacgactattttgtaaggattttaatgcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtatacaactacta 211422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 377435 - 377647
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||  |||||| ||||||| | |||| || ||||| || |||||||||   |||     
T  377435 atcagaagctgaagatcaccagaagttatagttcatcaggagatgcaagacttaaaacttcaaatgttgttgaatggatttaatctcgtctaagcattgc 377534  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||||||  |||| |||  |||||||||||| ||| |||||||  |||||||||||||||| |||||  |||||| |||||| |||||  |||||| ||||    
T  377535 agaagaccggaagagtgaagcaacgactatattgaaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagt 377634  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  377635 gtacaaccactat 377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 220326 - 220262
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| || ||  ||||||||||||| |||||  |||||||||||||| ||||||||    
T  220326 gcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 220472 - 220432
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcagga 51  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  220472 atcagaagctgaagatcaccagaagctgaagttcatcagga 220432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 244295 - 244371
Alignment:
Q  143 aaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||  ||| |||||||||||| |||||  ||||||||||| | || ||  |||||||||||||||||||||||    
T  244295 aaggatttgaagacattggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccacta 244371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 8150 - 7963
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagta 124  Q
    ||||||||||| || |||||||||| |  || |||||||||||||||||||||||| | ||||||||||||||||||  ||| |||||| ||||||||||    
T  8150 atcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattcaaactcgtctaagattgcagaagactggaaaagta 8051  T
Q  125 tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 212  Q
    ||||||||||||||||| |||||||  |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8050 tagcaacgactattttgaaaggattgaattgcattcgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 87 - 11
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaa 101  Q
    ||||||||||| || |||||||||| |  || |||||||||||||||||||||||| | ||||||||||||||||||    
T  87 atcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattcaaactcgtctaa 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 552 - 742
Alignment:
Q  30 cagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagc 128  Q
    |||||| || ||||||||||||  ||||||||||||||||| ||||||||| | |||||||||||||||||||| ||| |||||| |||||||||  |||    
T  552 cagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttgatggattcaaactcgtctaaagattgcagaagactggaaaagtgaagc 651  T
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  652 aacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccacta 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 1658 - 1843
Alignment:
Q  26 tcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagttgtagaagattggaaaagtat 125  Q
    |||||||||| |  ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||| ||||  ||| |||||| |||||||||||    
T  1658 tcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaacattgcagaagactggaaaagtat 1757  T
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
     |||||| |||||||| || |         ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1758 ggcaacggctattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactat 1843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 65297 - 65484
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  65297 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattcaaactcgtcta 65396  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgaca 188  Q
    |  ||| |||||| ||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  65397 agattgcagaagactggaaaagtatagaaacgactattttgaaaggattaaagggcattggatgcttattcttcaaagagcgttgaca 65484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 144342 - 144529
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  144342 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattcaaactcgtcta 144441  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgaca 188  Q
    |  ||| |||||| ||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  144442 agattgcagaagactggaaaagtatagcaacgactgttttgaaaggattaaagggcattggatgcttattcttcaaagagcgttgaca 144529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 164824 - 165033
Alignment:
Q  12 tcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaagttgtaga 110  Q
    |||||||||| | ||||| ||||  ||||||||||||| |  |||||| ||||| |||||| |||||||||| ||||||||||||||||||||     ||    
T  164824 tcagaagctgtatatcactagaaactgtagttcatcagtagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtctaaagaaagcga 164923  T
Q  111 a-gattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 209  Q
    | || || |  |   ||||||| |||| |||| |||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  164924 aagactgtagtatagtagcaacaactaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgt 165023  T
Q  210 acaaccacta 219  Q
    || |||||||    
T  165024 acgaccacta 165033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 5467 - 5689
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtag---ttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgt 97  Q
    ||||||||||||||||||||||  ||||||||||| ||  |   |||||||| |  ||||| |||||| |||||||| ||||||| ||||||||||||||    
T  5467 aagcaagtttatcagaagctgagaatcaccagaagctgctgctgttcatcagaagatgcaatttaaagattcaaaagttgtttaatggattcaaactcgt 5566  T
Q  98 ctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgt 196  Q
    |||||| ||| |||||| |||||||||| |||||| ||||||||| |||||||  |||||||| |||||||||||||||||||||||||||| ||||| |    
T  5567 ctaaagattgcagaagactggaaaagtaaagcaacaactattttgaaaggatttgaaggcatttgatgcttattcttcaaagagcgttgacaaagtacat 5666  T
Q  197 ttgtacgaagtgtacaaccacta 219  Q
    || || |||||||||||||||||    
T  5667 ttatatgaagtgtacaaccacta 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 22921 - 22700
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||  |||||  |||||||||||||| | |||| || ||||| || ||||||    
T  22921 aagcaagttcatcagaagctgaagatcaccagaggctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtc 22822  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| |||||||||  |||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||| |||||  |    
T  22821 taagcattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagtgttgacaaagtacaat 22722  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    |||| |||| ||||||||||||    
T  22721 tgtatgaagcgtacaaccacta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 1606 - 1786
Alignment:
Q  40 agttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactatt 138  Q
    ||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||| ||||  ||| |||||| | |||||||  |||||||||||||    
T  1606 agttcatcaggagatgcaactcaaagcttcaaaagctgtttaatggattcaaactcgtttaaatattgcagaagacttgaaaagtgaagcaacgactatt 1705  T
Q  139 ttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||| |||||||  |||||| |||||| || |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1706 ttgaaaggatttgaaggcactggatgattgttcttcaaagagcgttgacaaagtacgtttttacgaagtgtacaaccacta 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 17643 - 17853
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| |  | ||||||||||  | ||||||||||||||||||||||||| | |||||||||||||||||    
T  17643 aagcaagttcatcagaagctgtgaatcaccagaagcttcaattcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaactcgtcta 17742  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgt 200  Q
    |  ||| |||||| |  ||||||||||||||| ||||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17743 agattgcagaagactacaaaagtatagcaacgtctattttg---------aaaggcattggatgcttatccttcaaagagcgttgacatagtacgtttgt 17833  T
Q  201 acgaagtgtacaaccactat 220  Q
    | ||||||||||||||||||    
T  17834 atgaagtgtacaaccactat 17853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 7948 - 7727
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| | || ||||||||||  |||||  |||||||||||||| |||||| || ||||| || ||||||    
T  7948 aagcaagttcatcagaagctgaagatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtc 7849  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| | |||| ||||| |||  ||| ||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||| |||||  |    
T  7848 taagcattgcaaaagactggaagagtgaagccacgactattttggaaggatttaaaggcattgtatgtttattcttcaaagagcgttgacaaagtacaat 7749  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  7748 tgtacgaagtgtacaaccacta 7727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 34681 - 34891
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||| ||||| || ||||| ||||||  |||||||||||| |||||||| ||||| | ||||||||||||| |||    
T  34681 aagcaagttcatcagaagctgtgtatcactagaagctgcagttcttcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaactcgccta 34780  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| ||||||||||| ||||||| ||||||| || |         ||||||||||||||||||||||||||||||||||||||||||||    
T  34781 gaaattgcagaagactggaaaagtatggcaacgaatattttgaaatg---------cattggatgcttattcttcaaagagcgttgacatagtacgtttg 34871  T
Q  200 tacgaagtgtacaaccacta 219  Q
    || |||||||||||||||||    
T  34872 tatgaagtgtacaaccacta 34891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 25566 - 25752
Alignment:
Q  25 atcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta-aagttgtagaagattggaaaagt 123  Q
    ||||||||||| || ||||||||||||  |||||||||||| |||||||| ||||| | ||||||||||||| ||| || ||| | |||| |||||||||    
T  25566 atcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaactcgcctagaaattgcaaaagactggaaaagt 25665  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    || |||||   ||||||| || |         |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25666 atggcaacagatattttgaaatg---------cattggatgcttattcttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 25752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 49567 - 49355
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||   |||| || ||||| || |||||||||   |||     
T  49567 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagtcttaaagcttcaaagtttgttcaatggatttaatctcgtctaagcattgc 49468  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||||| ||| |||  |||||| ||||||||| |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |||||||||||    
T  49467 agaagatttgaagagtgaagcaactactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagt 49368  T
Q  208 gtacaaccactat 220  Q
    ||||||| |||||    
T  49367 gtacaacaactat 49355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 32726 - 32508
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaa 102  Q
    ||||| |||||||||| |||||||||| || ||||||||||||||||  |||||  ||||||||||||||  ||||| || ||||| || |||||||||     
T  32726 aagttcatcagaagctaaagatcaccacaacttgtagttcatcaggagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtctaag 32627  T
Q  103 g-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta 201  Q
      ||| |||||| ||||| |||  || ||||||||||||| |||||||  || ||||| ||||||| |||||  ||||||||||||| |||||  |||||    
T  32626 cattgcagaagactggaagagtgaagtaacgactattttgaaaggatttgaatgcatttgatgcttgttctttgaagagcgttgacaaagtacaattgta 32527  T
Q  202 cgaagtgtacaaccactat 220  Q
    |||||||||||||||||||    
T  32526 cgaagtgtacaaccactat 32508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 212 - 432
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtct 99  Q
    |||||||| |||||||||||| | ||||||||||  |||| |||||||| |  |||||| ||||| |||||| |||||||||| ||||||||||||||||    
T  212 aagcaagtctatcagaagctgtatatcaccagaaactgtacttcatcagaagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtct 311  T
Q  100 aaagttgtagaa-gattggaaaagta---tagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacg 195  Q
    ||||     ||| || |   ||||||   |||||||| ||| |||| |||||||  |||||||||||||||||| |||||||||||||||||| ||||||    
T  312 aaagagagcgaaagact---aaagtaaagtagcaacggctaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacg 408  T
Q  196 tttgtacgaagtgtacaaccacta 219  Q
    | |||||||||||||| |||||||    
T  409 tctgtacgaagtgtacgaccacta 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2580 - 2720
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||| | ||||||||||  || ||||||||||||| |||||| ||||| |||||||||||||| | ||||||||||||| |||    
T  2580 aagcaagttcatcagaagctgtaaatcaccagaaactgcagttcatcaggaaatgcaacctaaagtttcaaaagctgtttcaaggattcaaactcgccta 2679  T
Q  101 aagttgtagaagattggaaaagtatagcaacgactattttg 141  Q
    || ||| |||||| |||||||||||||||||| ||||||||    
T  2680 aaattgcagaagactggaaaagtatagcaacggctattttg 2720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 2738 - 2778
Alignment:
Q  179 agcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  2738 agcgttgacatagtacgtttgtatgaagtgtacaaccacta 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 2707 - 2818
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||||||||| |||||||||||||||||||| ||  || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  2707 agaagactggaaaagtattgcaacgactattttggaagg-ttggaaagcattggatgcgtattcttcaaagagtgttgacatagtacgtttgtacgaagt 2805  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  2806 gtacaaccactat 2818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 25384 - 25487
Alignment:
Q  117 gaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacca 216  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25384 gaaaagtatagcaacgactattttgaaaggattgaagggcattggatagttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaacca 25483  T
Q  217 ctat 220  Q
    ||||    
T  25484 ctat 25487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23431 - 23551
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   ||||||||||| || ||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    
T  23431 aagcaagttcatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgtcta 23530  T
Q  101 aagttgtagaagattggaaaa 121  Q
    |  ||| |||||| |||||||    
T  23531 agattgcagaagactggaaaa 23551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 89923 - 90138
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||  ||||||||||||||||||| | || | || | ||| || ||||||||    
T  89923 aagcaagttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgatcaatgtatttaatctcgtcta 90022  T
Q  101 a-agttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
    |   ||  |||||| ||||| |||  | ||||| |||||||| |||||||  |||||||||||||||| |||||||||||||||||||| | |||   ||    
T  90023 agtattacagaagactggaagagtgaaccaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaaatacaagtg 90122  T
Q  200 tacgaagtgtacaacc 215  Q
    ||||||||||||||||    
T  90123 tacgaagtgtacaacc 90138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 60240 - 60039
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgtagaagattgga 118  Q
    |||||||||||||| |  |||||||||| |  |||||  |||||||||||||| | |||| || ||||| || |||||| || | ||| |||||| ||||    
T  60240 aagatcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtccaagaattgcagaagactgga 60141  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    |||||  |||||||||||||||| |||||||  ||| |||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  60140 aaagtgaagcaacgactattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 60041  T
Q  219 at 220  Q
    ||    
T  60040 at 60039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 8150 - 7949
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||| |||||||| |  ||||||||||||  |||||  |||||||||||||| | |||| || ||||| || |||||| ||   |||||||||| || |    
T  8150 aagataaccagaagctaaagttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgtagaagactgta 8051  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    |||||  |||||||||||||||| |||||||  ||  |||||||||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  8050 aaagtgaagcaacgactattttgaaaggatttgaattcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 7951  T
Q  219 at 220  Q
    ||    
T  7950 at 7949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 710 - 502
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| |  || |||||||||  |||||  |||||||| ||||| | |||| ||  |||| || |||||||||   |||     
T  710 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 611  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  |||||||||||||||| |||||  |||||||||||||||||||  |||||||||||    
T  610 agaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagt 511  T
Q  208 gtacaacca 216  Q
    |||||||||    
T  510 gtacaacca 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 25851 - 26063
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||||||||||| |  || |||||||||  |||||  |||||||| ||||| | |||| || ||||| || |||||||||   |||     
T  25851 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaagcattgc 25950  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    | |||| |||||||||  |||||||||||||||| |||||||  |||||||||||||||| |||||  ||||| |||||||||||||  ||||| |||||    
T  25951 aaaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagggttgacatagtacaattgtatgaagt 26050  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  26051 gtacaaccactat 26063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 44676 - 44782
Alignment:
Q  104 ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacg 203  Q
    |||||||||| |||||||||  ||||||| |||||||| |||||||  |||||||| ||||||| |||||  ||||||||||||||| |||  |||||||    
T  44676 ttgtagaagactggaaaagtgaagcaacgtctattttgaaaggatttgaaggcattagatgcttgttctttgaagagcgttgacataatacaattgtacg 44775  T
Q  204 aagtgta 210  Q
    |||||||    
T  44776 aagtgta 44782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 4823 - 5034
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||| |||||||||||||||||||| | ||||||||||| |  |||||  |||||||||||||| |||||| || ||||| || |||||||||   ||||    
T  4823 atcataagctgaagatcaccagaagctctagttcatcagaagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgt 4922  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| || || |||  ||| |||||||||||| |||||||  ||||||||||||| || ||||| | |||||||||||| |||||  ||||| |||||    
T  4923 agaagactgaaagagtgaagcgacgactattttgaaaggatttgaaggcattggatgtttgttctttatagagcgttgacaaagtacaattgtatgaagt 5022  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  5023 gtacaaccacta 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 698 - 908
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||    |||||||||  || ||||||||||||  || ||||||||| |||||||||||||| | ||| || ||||||||||    
T  698 aagcaagttcatcagaagctgtgtttcaccagaaactgcagttcatcaggagatgaaacttaaagtttcaaaagctgtttcaaggactctaactcgtcta 797  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| | ||||||||| |||||  |||||||| || |          |||||||||||||||||||||||||||||||||| ||||||||    
T  798 taaattgcagaagactagaaaagtatggcaacagctattttgaaatgt---------attggatgcttattcttcaaagagcgttgacataatacgtttg 888  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  889 tacgaagtgtacaaccacta 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 18497 - 18709
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaac--ttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||| |||||||||||||||||||| || ||||||||||||    |||   ||||||||||||| |||||| || ||||| || |||||||||   |||     
T  18497 atcataagctgaagatcaccagaagctgcagttcatcaggagacacaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 18596  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  |||||||||||| ||| |||||  ||||||||||||| |||||  || ||||||||    
T  18597 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatacttgttctttgaagagcgttgacaaagtacaattttacgaagt 18696  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  18697 gtacaaccactat 18709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10212 - 9993
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  |||||||| |||||||| ||||||||||||  |||||  |||||||||||||| ||| || || |||||||| ||||||    
T  10212 aagcaagttcatcagaagc--aagatcacaagaagttgaagttcatcaggagatgcaagacttaaagcttcaaaggctattcaatggattcaatctcgtc 10115  T
Q  99 taaagtt-gtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||  || | |||||| | ||| |||  || ||||||||||||| |||||||  || |||||||||||||| ||||  ||||||||| ||| |||||  |    
T  10114 taagctttgcagaagactagaagagtgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttcacaaagtacaat 10015  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||| ||||||||||||||||    
T  10014 tgtacaaagtgtacaaccacta 9993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 20850 - 21059
Alignment:
Q  14 agaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtaga 110  Q
    |||||||||||||||||| |||||| ||||||||| ||  |||||  |||||||||||||| | |||| ||  |||| || |||||||||   ||| |||    
T  20850 agaagctgaagatcaccaaaagttgaagttcatcaagagatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcaga 20949  T
Q  111 agattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgta 210  Q
    ||| | ||| |||  |||||||   |||||| |||||||  |||||||||||||||||||||||||||||||| |||  |||||  ||||||||||||||    
T  20950 agactagaagagtgaagcaacggtcattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgta 21049  T
Q  211 caaccactat 220  Q
    ||||||||||    
T  21050 caaccactat 21059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 12444 - 12232
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    |||||||| ||| |||||||||||| | |||||||||||||    |||  |||||||||||||| |||||| || | ||| || |||||||||   |||     
T  12444 atcagaagttgaggatcaccagaagctctagttcatcaggagacacaagacttaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgc 12345  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||| ||||| |||  |||||| ||||||||| ||| |||  || |||||||||||||||||||  ||||||||||||| |||||  |||||||||||    
T  12344 agaagactggaagagtgaagcaacaactattttgaaagaatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagt 12245  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  12244 gtacaaccactat 12232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 1884 - 1684
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagtt-gtagaagattgga 118  Q
    |||||||||||||| || ||||||||||||  |||||  |||||||||||||| | |||| || |||||||| |||||||||  || | |||||| | ||    
T  1884 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagctttgcagaagactaga 1785  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  | |||||||||||||| |||||||  || |||||||||||||| ||||  ||||||||||||| |||||  ||||| ||||||||||||||||    
T  1784 agagtgaaacaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccact 1685  T
Q  219 a 219  Q
    |    
T  1684 a 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 9983 - 10195
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagct-gtttaacggattcaaactcgtctaaagtt-g 106  Q
    ||||||| ||||| ||||||||||| || ||||||||||||  |||||  |||||||||||||||| | ||| || ||||| || ||| |||||  || |    
T  9983 atcagaaactgaaaatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcatctaagctttg 10082  T
Q  107 tagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaag 206  Q
     |||||| | ||| |||  |||||||||||||||| |||||||  |||||||||||||||| || || |||||||||||||| |||||  ||||||||||    
T  10083 cagaagactagaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaag 10182  T
Q  207 tgtacaaccacta 219  Q
    ||||| |||||||    
T  10183 tgtacgaccacta 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 27297 - 27516
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| |||||||||  |||||||||||| | || ||||||||||||  |||||  |||||||||||||| | |||| || | ||| || ||||||    
T  27297 aagcaagttcatcagaagc--aagatcaccagatgctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtc 27394  T
Q  99 taaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtt 197  Q
    |||   ||| |||||| || || |||  ||||||  ||||||||  ||||||  ||||||||||||||||  ||||||||||||||||||| |||||  |    
T  27395 taagcattgcagaagactgaaagagtgaagcaacagctattttgataggattcgaaggcattggatgcttgctcttcaaagagcgttgacaaagtaccat 27494  T
Q  198 tgtacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||||    
T  27495 tgtacgaagtgtacaaccacta 27516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 143333 - 143146
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||| ||||| | || ||||||| ||  |||||  || ||||||| ||| ||| || || ||||| || ||||||    
T  143333 aagcaagttcatcagaagctgaagatcactagaagctctatttcatcacgagatgcaagactcaaagcttgaaaggctattcaatggatttaatctcgtc 143234  T
Q  99 taaag--ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttg 185  Q
     ||||  ||| |||||| ||||| |||  ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  143233 -aaagcattgcagaagactggaagagtgaagcaacgactattttggaaggatttaaaggcattggatgcttgttcttcaaagagcgttg 143146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 30459 - 30283
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||||||||||| |||||||||||| ||||||||||  |||||  |||||||||||||| | |||| ||  ||||||| |||||||||   |||     
T  30459 atcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgc 30360  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgtt 184  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  || ||||||||||||| |||||  |||||||||    
T  30359 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 30283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 9994 - 9927
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||||||| |||||  ||||||||||||| |||||  |||||||||||||| ||||||||    
T  9994 aaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccacta 9927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 6074 - 6250
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtctaa-agttgt 107  Q
    ||||||||||||||||| |||||||||||| ||||||||||  ||||  ||||||||||||||| | |||| ||  ||||||| |||||||||   |||     
T  6074 atcagaagctgaagatctccagaagttgtaattcatcaggagatgcaagacttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgc 6173  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgtt 184  Q
    |||||| ||||| |||  |||||||||||||||| |||||||  || ||||||||||||| |||||  |||||||||    
T  6174 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgtt 6250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 246115 - 246215
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||||||||||   |||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||| | ||||||||||||| |||    
T  246115 aagcaagttcatcagaagctgtgaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgccta 246214  T
Q  101 a 101  Q
    |    
T  246215 a 246215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 212541 - 212378
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaa-ggattacaagg 155  Q
    ||||||||||||||| ||| ||  | |||||||| |||||||||   ||| |||||| | ||| |||  |||||| ||||||||  || |||||  || |    
T  212541 acttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaaaggatttgaaag 212442  T
Q  156 cattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| |||||  ||||||||||||| |||||  |||||||||||||||||||||||    
T  212441 cattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 212378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 36651 - 36862
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||||| ||||| || ||||||||| ||  |||||  |||||||||||||| |||| | || | ||| || |||||||||   |||     
T  36651 atcagaagcagaagatcactagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgc 36750  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||| || | |||||||  ||||||||||| |||| |||||||  |||||||||||||||| ||||| |||||| ||||||| || ||  |||||||||||    
T  36751 agatgactagaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagt 36850  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  36851 gtacaaccacta 36862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 42354 - 42143
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgt 107  Q
    ||||||||| ||||||||| ||||| || ||||||||| ||  |||||  |||||||||||||| |||| | || | ||| || |||||||||   |||     
T  42354 atcagaagcagaagatcactagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgc 42255  T
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    ||| || | |||||||  ||||||||||| |||| |||||||  |||||||||||||||| ||||| |||||| ||||||| || ||  |||||||||||    
T  42254 agatgactagaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagt 42155  T
Q  208 gtacaaccacta 219  Q
    ||||||||||||    
T  42154 gtacaaccacta 42143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 5577 - 5778
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    ||||||||| |||| || ||||||||||||  |||||  |||| ||||||||| | |||| || ||||| || |||||| ||   |||||||||||||||    
T  5577 aagatcacctgaagctgaagttcatcaggagatgcaagacttagagcttcaaaggttgttcaatggatttaatctcgtccaagtattgtagaagattgga 5676  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  ||||||  |||||||| ||||||   |||||||||||||||| |||||  ||||||||||||| |||||  |||||||||||||||||| |||    
T  5677 agagtggagcaacatctattttgaaaggatatgaaggcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactact 5776  T
Q  219 at 220  Q
    ||    
T  5777 at 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 13706 - 13594
Alignment:
Q  108 agaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagt 207  Q
    |||||||||||| |||  |||||| ||||||||| |||||||  ||||||||||||| || |||||  |||||||||||||||||||  |||||| ||||    
T  13706 agaagattggaatagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttctttgaagagcgttgacatagtacaattgtacaaagt 13607  T
Q  208 gtacaaccactat 220  Q
    |||||||||||||    
T  13606 gtacaaccactat 13594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 87479 - 87687
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtcta 100  Q
    ||||||||| |||| ||||  ||| ||| |||||  ||||||| |||||||  |  ||||||||| |||||||||||||| | ||| || |||| | |||    
T  87479 aagcaagttcatcaaaagc--aagttcatcagaaactgtagtttatcaggagattgaacttaaagtttcaaaagctgtttcaaggactctaacttgccta 87576  T
Q  101 -aagttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttg 199  Q
     || ||| |||||| || |||||||| ||||||||||||||| || |         ||||||||||  ||||||||||||||||||||||||||||| ||    
T  87577 gaaattgcagaagactgaaaaagtatggcaacgactattttgaaatg---------cattggatgcaaattcttcaaagagcgttgacatagtacgtctg 87667  T
Q  200 tacgaagtgtacaaccacta 219  Q
    ||||||||||||||||||||    
T  87668 tacgaagtgtacaaccacta 87687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 14834 - 14672
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||| |||  |||||| ||||||||| |||||||  |||||    
T  14834 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaggc 14735  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||| | |||  ||||||||||||| |||||  || ||||||||||||||||||||    
T  14734 attggatgcttgtactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccacta 14672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 1876 - 1714
Alignment:
Q  58 acttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagtatagcaacgactattttggaaggattacaaggc 156  Q
    ||||||||||||||| | |||| || ||||| || |||||||||   ||| |||||| ||||  |||  |||||| ||||||||| |||||||  |||||    
T  1876 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaggagtgaagcaacaactattttgaaaggatttgaaggc 1777  T
Q  157 attggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||||||||| | |||  ||||||||||||| |||||  |||||||||||||||||||||||    
T  1776 attggatgcttgtactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 7469 - 7405
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7469 gcattggatgctaattcatcaaagagcgttgacatagtacatttgtacgaagtgtacaaccacta 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 38080 - 38172
Alignment:
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| ||||| |||| |||||||  |||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||| |||||||    
T  38080 gcaatgactaatttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtccgtacgaagtgtacgaccacta 38172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 37966 - 38055
Alignment:
Q  15 gaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||| | ||||||||||  | |||||||||||||  |||||| ||||| || ||| |||| ||||| ||||||||| ||||||||||    
T  37966 gaagctgtatatcaccagaaactatagttcatcaggagatgcaacctaaagttttaaatagctatttaaaggattcaaattcgtctaaag 38055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 219
Target Start/End: Complemental strand, 103791 - 103596
Alignment:
Q  27 caccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattggaaaagt 123  Q
    ||||||||| || ||||||||||||  |||||  |||||||||| ||| | |||| || | ||| ||  | |||||||  ||| |||||| ||||| |||    
T  103791 caccagaagctgaagttcatcaggagatgcaagacttaaagcttgaaaggttgttaaatgaatttaattttgtctaaacattgcagaagactggaagagt 103692  T
Q  124 atagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
      ||||||| |||||||| || |||   |||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  103691 gaagcaacggctattttgaaatgatattaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtgcaaccacta 103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 17182 - 17089
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaa-agctgtttaacggattcaaactcgtctaaag 103  Q
    ||||||||||| | |||||||||| |||||||||||||| || |||||| ||||| |||||| || ||||||| ||||||||||||||||||||    
T  17182 atcagaagctgtatatcaccagaaattgtagttcatcagaaaatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtctaaag 17089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 1803 - 1884
Alignment:
Q  138 tttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||| |||||||  |||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||| |||||||    
T  1803 tttgaaaggatttgaaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctatacgaagtgtacgaccacta 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 15617 - 15710
Alignment:
Q  127 gcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||| ||| |||| |||||||  ||||||||||||||||||  |||||||||| |||||| ||||||| |||||||||||||| ||||||||    
T  15617 gcaacggctagtttgaaaggatttgaaggcattggatgcttatctttcaaagagcattgacaaagtacgtctgtacgaagtgtacgaccactat 15710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 812 - 747
Alignment:
Q  155 gcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  812 gcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactat 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 15341 - 15140
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| || ||| ||| ||||  |||||  |||||||||||||| |||| | || ||||| || |||||||||   ||| ||||||   ||    
T  15341 aagatcaccagaagatgaagtgcataaggagatgcaagacttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccaga 15242  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccact 218  Q
    | |||  |||| ||||||||||| |||||||  || |||||||||| || |||||  || |||||||||| |||||  ||||||||||||||||||||||    
T  15241 agagtgaagcatcgactattttgaaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccact 15142  T
Q  219 at 220  Q
    ||    
T  15141 at 15140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 5211 - 5412
Alignment:
Q  11 atcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtag 109  Q
    |||||||||||   ||||||||||| || ||||||||||||  |  |||||| || |||||||||||||| | ||| || |||||| |||||| ||| ||    
T  5211 atcagaagctgtgtatcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagctgttttaaggactctaactcgcctaaagattgcag 5310  T
Q  110 aagattggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgta-cgaagtg 208  Q
    |||| |||||| || | |||||  |||||||| || |         |||||||||| |||||||||||||||||||||||||||||| ||||   |||||    
T  5311 aagactggaaatgtgtggcaacagctattttgaaatg---------cattggatgcctattcttcaaagagcgttgacatagtacgtatgtagaaaagtg 5401  T
Q  209 tacaaccacta 219  Q
    |||||||||||    
T  5402 tacaaccacta 5412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39670 - 39569
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||  ||||  | ||||||||||||| |||||| || ||||| || ||||||    
T  39670 aagcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtc 39571  T
Q  99 ta 100  Q
    ||    
T  39570 ta 39569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 137730 - 137629
Alignment:
Q  1 aagcaagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaagctgtttaacggattcaaactcgtc 98  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||  ||||  | ||||||||||||| |||||| || ||||| || ||||||    
T  137730 aagcaagttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtc 137631  T
Q  99 ta 100  Q
    ||    
T  137630 ta 137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 6107 - 6031
Alignment:
Q  143 aaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||  |||||||||||||||| |||||  ||||||||||||| |||||  |||||| ||||||||||||||||    
T  6107 aaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 6031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 15902 - 15819
Alignment:
Q  135 tattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtac-gtttgtacgaagtgtacaaccac 217  Q
    ||||||| ||||| |  |||||||||||||||| |||||  |||||||||||||||||||   |||||||||||||||||||||    
T  15902 tattttgaaaggacttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaaattgtacgaagtgtacaaccac 15819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 9909 - 9825
Alignment:
Q  129 aacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaa 213  Q
    ||||||||||||| ||||| |  || ||||||||||||| | |||  |||||||||||||||||||  |||||| ||||||||||    
T  9909 aacgactattttgaaaggacttgaaagcattggatgcttgtgctttgaagagcgttgacatagtacaattgtacaaagtgtacaa 9825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 3915 - 3982
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    ||||| ||||||||| || || ||||||||||||||| ||||| | |||||||||||||| |||||||    
T  3915 aaggctttggatgctcatcctacaaagagcgttgacaaagtacatctgtacgaagtgtacgaccacta 3982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 10047 - 9980
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| ||||||| |||||  ||||||||||||| |||||  |||||| ||||||||||||||||    
T  10047 aaggcattcgatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 9980  T

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Target: scaffold1747 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 1408 - 1340
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||| |||||||||| ||  ||||||||||| | | |||  ||||||||||||||||||||||||    
T  1408 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactat 1340  T

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Target: scaffold1745 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 3 - 71
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||| |||||||||| ||  ||||||||||| | | |||  ||||||||||||||||||||||||    
T  3 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactat 71  T

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Target: scaffold0530 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 2039 - 2083
Alignment:
Q  176 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  2039 aagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 2083  T

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Target: scaffold0261 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 5809 - 5880
Alignment:
Q  5 aagtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgca--acttaaagcttcaaaag 74  Q
    ||||| |||||||||| |||||||||||||| || ||||||| ||||  ||||  |||||||||||||||||    
T  5809 aagttcatcagaagctaaagatcaccagaagctgaagttcattaggagatgcaagacttaaagcttcaaaag 5880  T

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Target: scaffold1434 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 673 - 827
Alignment:
Q  22 aagatcaccagaagttgtagttcatcaggaagtgcaa--cttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-ttgtagaagattgga 118  Q
    |||||||||||||| |  ||||||||||||  |||||  |||||| |||||||  ||||| || | ||| || |||||||||   ||| |||||| ||||    
T  673 aagatcaccagaagctaaagttcatcaggagatgcaagacttaaaacttcaaagactgttcaatgaatttaatctcgtctaagcattgcagaagactgga 772  T
Q  119 aaagtatagcaacgactattttggaaggattacaaggcattggatgcttattctt 173  Q
    | |||  ||||  |||||||||| |||||||  |||||||||||||||| |||||    
T  773 atagtgaagcactgactattttgaaaggatttgaaggcattggatgcttgttctt 827  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 1515 - 1609
Alignment:
Q  126 agcaacgactattttggaaggattacaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    ||||||||||||||   |||||||  ||||||||||| | ||||||||  |||| |||||  | || ||  ||||||||||||||||||||||||    
T  1515 agcaacgactatttcaaaaggatttgaaggcattggacgtttattctttgaagaacgttggaaaaggacaattgtacgaagtgtacaaccactat 1609  T

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Target: scaffold0269 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 7369 - 7309
Alignment:
Q  159 tggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccacta 219  Q
    |||||||| || || ||||||| ||||||| ||||| | |||||||||||||| |||||||    
T  7369 tggatgctcatcctacaaagagtgttgacaaagtacatatgtacgaagtgtacgaccacta 7309  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 43939 - 44007
Alignment:
Q  152 aaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactat 220  Q
    |||||||||||||| | ||| |  ||||||||||| | || || |||||||||| ||||||||||||||    
T  43939 aaggcattggatgcctgttccttgaagagcgttgaaaaaggacatttgtacgaattgtacaaccactat 44007  T

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