View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7346_high_6 (Length: 233)
Name: NF7346_high_6
Description: NF7346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7346_high_6 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 35093470 - 35093685
Alignment:
| Q |
18 |
caatcttcaaaagcttaaccatctccccctcattattacttgttaactccatatctttatcaaaaacctcgctactccactcttccggtacaacagaatc |
117 |
Q |
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| T |
35093470 |
caatcttcaaaagcttaaccatctccccctcattattacttgttaactccatatctttatcaaaaacctcgctactccactcttccggtacaacagaatc |
35093569 |
T |
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| Q |
118 |
cacccaattcgctaaactcaactcgctccctttaccactttgttgtaggaaattagcaggaagttttccggttagaatttccaaaatgagtctaccgata |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
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| T |
35093570 |
cacccaattcgctaaactcaactcgctccctttaccactttgttgtaggaaattagcaggaagttttccggttagaatttccaaaatgagtataccgaga |
35093669 |
T |
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| Q |
218 |
ctccacacatcagtct |
233 |
Q |
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|||||||||||||||| |
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| T |
35093670 |
ctccacacatcagtct |
35093685 |
T |
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