View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7347_low_25 (Length: 414)
Name: NF7347_low_25
Description: NF7347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7347_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 20 - 397
Target Start/End: Complemental strand, 35254509 - 35254132
Alignment:
| Q |
20 |
atgtgcacatacattgtatgccttctcaagttccttcgttccggggagtttgaactgagtgtatccaaactttttatttagttccctgccatagaatgat |
119 |
Q |
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| T |
35254509 |
atgtgcacatacattgtatgccttctcaagttccttcgttccggggagtttgaactgagtgtatccaaactttttatttagttccctgccatagaatgat |
35254410 |
T |
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| Q |
120 |
gaatagttgtaattgagaaaaagtttcctaggtgataaataaataaaatcattgaactttatctatgtttgttaaataagtttttaatatgaaaaatgat |
219 |
Q |
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| T |
35254409 |
gaaaagttgtaattgagaaaaagtttcctaggtgataaatgaataaaatcattgaactttatctatgtttgttaaataagtttttaatatgaaaaatgat |
35254310 |
T |
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| Q |
220 |
tagtactcgactatctcgcatactcctcggtagaattctgggaagtcccttgaagcattttttatatctttttcatagaatttatctataattggtccaa |
319 |
Q |
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| T |
35254309 |
tagtactcgactatctcgcatactcctcggtagaattctgggaagtcccttgaagcattttttatatctttttcatagaatttatctataattggtccaa |
35254210 |
T |
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| Q |
320 |
gttccttggccttcttttcatcagttcctgcatcaatttttcataaaaataaacaaaatattaacatgctattagtat |
397 |
Q |
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| T |
35254209 |
gttccttggccttcttttcatcagttcctgcatcaatttttcataaaaataaacaaaatattaacatgctattagtat |
35254132 |
T |
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