View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7347_low_53 (Length: 251)
Name: NF7347_low_53
Description: NF7347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7347_low_53 |
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Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 43195716 - 43195510
Alignment:
| Q |
13 |
aatatccacatttgttaaataagcccataaatatctaaataataattttgttttggtatattgtctaaatcatttctacaaaagtcacatactacgtttt |
112 |
Q |
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| T |
43195716 |
aatatccacatttgttaaataagcccataaatatctaaataataattttattttggtatattgtctaaatcatttctacaaaattcacatactacgtttt |
43195617 |
T |
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| Q |
113 |
tcttgtcctaattaaagtaattttccttgcacctgttaaatgaccttgaccatgcatgttaatgagttttataacaactgtctattcaaatactatttat |
212 |
Q |
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| T |
43195616 |
tcttgtcctaaataaagtaattttccttgcacctgttaaatgaccttgaccatgcatgttaatgagttttataacaactgtctattcaaatactatttat |
43195517 |
T |
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| Q |
213 |
aataatt |
219 |
Q |
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||||||| |
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| T |
43195516 |
aataatt |
43195510 |
T |
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