View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7347_low_60 (Length: 233)
Name: NF7347_low_60
Description: NF7347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7347_low_60 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 34861579 - 34861380
Alignment:
| Q |
20 |
agatcacagctagccaaaacatggttctataaaaatctgtccatctacaataaaaaacaaataatctgattgataaatgaagtatcattcattatgtaaa |
119 |
Q |
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| T |
34861579 |
agatcacagctagccaaaacatggttctataaaaatctgtccatctacaataaaaaacaaataatctgattgataaatgaagtatcattcattatgtaaa |
34861480 |
T |
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| Q |
120 |
caaaaggtgttcattttcataattggtgttcattgtcatatcaaaaggaaagacctaatttcacaaacaaaattataatgcattgacacatgtataactt |
219 |
Q |
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| T |
34861479 |
caaaaggtgttcattttcataattggtgttcattgtcatatcaaaaggaaagacctaatttcacaaacaaaattataatgcattgacacatgtataactt |
34861380 |
T |
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