View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7347_low_63 (Length: 229)
Name: NF7347_low_63
Description: NF7347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7347_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 28013423 - 28013596
Alignment:
| Q |
10 |
aataatattgttgttacttatgaatttattactattatggtaattggtagagtaacgtgggatatagaggtgatgaaacaatgtcgacaccatgagatta |
109 |
Q |
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| T |
28013423 |
aataatatcgttgttacttatgaatttattactattatggtaattggtagagtaacgtgggatatagaggtgatgaaacaatgtcgacaccatgagatta |
28013522 |
T |
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| Q |
110 |
ttcccatatcctctacatgacgacactcctctttcttttctttctccaccaaccaatcctattataaaccattt |
183 |
Q |
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| T |
28013523 |
ttcccatatcctctacatgacgacactcctctttcttttctttctccaccaaccaatcctattataaaccattt |
28013596 |
T |
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