View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7350_high_27 (Length: 298)
Name: NF7350_high_27
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7350_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 35915513 - 35915241
Alignment:
| Q |
14 |
aaaaaggagtatttgatgtgttctattaatggagggttttatggttggtgttgtatattctaccatacgtttgtaaccgtcagcaccaaaattttaggag |
113 |
Q |
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| T |
35915513 |
aaaaaggagtatttgatgtgttctattaatggagggttttatggttggtgttgtatattctaccatacgtttgtaaccgtcagcaccaaaattttaggag |
35915414 |
T |
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| Q |
114 |
caatatttagtagtgctatctatgtatgtactatgttgtgttgtgcttgattgatgggtgcaactacattcgggtaaaatcttttctctgtgtaatnnnn |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35915413 |
caatatttagtagtgctatctatgtatgtactatgttgtgttgtgcttgattgatgggtgcaactacattcgggtaaaatcttttctttgtgtaataaaa |
35915314 |
T |
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| Q |
214 |
nnngataaaacaacaacaatagggttttgtagctgatttagttgcttcttatgtgtcattattacctgatatt |
286 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35915313 |
aaagataaaataacaacaatagggttttgtagctgatttagttgcttcttatgtgtcattattacctgatatt |
35915241 |
T |
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