View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7350_low_22 (Length: 393)

Name: NF7350_low_22
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7350_low_22
NF7350_low_22
[»] chr7 (31 HSPs)
chr7 (1-388)||(12358532-12358922)
chr7 (86-264)||(5312679-5312858)
chr7 (73-255)||(3268868-3269051)
chr7 (110-260)||(18496631-18496782)
chr7 (85-264)||(30405637-30405815)
chr7 (103-264)||(24596897-24597059)
chr7 (73-264)||(29544548-29544741)
chr7 (73-232)||(20461573-20461733)
chr7 (87-264)||(1074495-1074674)
chr7 (87-260)||(9801772-9801946)
chr7 (73-233)||(1255137-1255299)
chr7 (85-200)||(17881457-17881572)
chr7 (87-264)||(23124943-23125122)
chr7 (105-264)||(20470703-20470864)
chr7 (87-265)||(9761308-9761487)
chr7 (85-264)||(7372461-7372640)
chr7 (87-185)||(8309005-8309103)
chr7 (73-164)||(7815352-7815443)
chr7 (209-264)||(21545720-21545775)
chr7 (114-195)||(7326834-7326915)
chr7 (104-230)||(7142158-7142286)
chr7 (73-264)||(22532538-22532729)
chr7 (85-148)||(4977831-4977894)
chr7 (210-264)||(14649663-14649717)
chr7 (107-159)||(2632436-2632488)
chr7 (85-156)||(37144961-37145032)
chr7 (125-175)||(2353229-2353279)
chr7 (73-155)||(21545803-21545885)
chr7 (110-200)||(4828857-4828945)
chr7 (209-264)||(7494863-7494917)
chr7 (87-154)||(10292797-10292864)
[»] chr8 (33 HSPs)
chr8 (1-263)||(29291725-29291990)
chr8 (85-244)||(30543802-30543962)
chr8 (86-264)||(5153800-5153979)
chr8 (77-264)||(6888086-6888271)
chr8 (98-265)||(14424705-14424873)
chr8 (85-254)||(28074555-28074724)
chr8 (73-175)||(10867017-10867119)
chr8 (73-264)||(28291994-28292185)
chr8 (85-264)||(11437460-11437641)
chr8 (85-258)||(30850999-30851173)
chr8 (73-187)||(27097771-27097887)
chr8 (84-185)||(28260263-28260364)
chr8 (90-185)||(31436525-31436620)
chr8 (104-264)||(16052170-16052332)
chr8 (73-175)||(24584707-24584810)
chr8 (104-260)||(24696641-24696799)
chr8 (100-191)||(12774810-12774902)
chr8 (143-264)||(13583413-13583535)
chr8 (73-264)||(32239316-32239509)
chr8 (104-165)||(35135416-35135477)
chr8 (110-264)||(22894425-22894579)
chr8 (123-264)||(28859132-28859275)
chr8 (74-164)||(5570136-5570226)
chr8 (73-166)||(41505530-41505623)
chr8 (73-260)||(12956518-12956698)
chr8 (73-264)||(28901243-28901426)
chr8 (145-191)||(12357574-12357620)
chr8 (145-191)||(12358702-12358748)
chr8 (104-158)||(13081938-13081992)
chr8 (84-185)||(16054334-16054436)
chr8 (112-170)||(31232124-31232182)
chr8 (73-130)||(28902118-28902175)
chr8 (209-264)||(11310149-11310203)
[»] chr5 (33 HSPs)
chr5 (85-264)||(20694681-20694861)
chr5 (9-264)||(26070436-26070695)
chr5 (84-264)||(7742763-7742944)
chr5 (73-257)||(24410830-24411015)
chr5 (73-256)||(25594593-25594778)
chr5 (104-192)||(25367654-25367742)
chr5 (121-264)||(11274223-11274368)
chr5 (106-260)||(18178162-18178319)
chr5 (73-260)||(16634075-16634264)
chr5 (81-264)||(26329963-26330146)
chr5 (100-187)||(30790832-30790919)
chr5 (121-260)||(11997790-11997932)
chr5 (85-233)||(19763817-19763964)
chr5 (73-264)||(17027556-17027748)
chr5 (73-263)||(24841782-24841973)
chr5 (73-186)||(19331540-19331651)
chr5 (87-175)||(29150890-29150977)
chr5 (73-264)||(20083494-20083688)
chr5 (73-156)||(25680625-25680708)
chr5 (147-264)||(30072218-30072337)
chr5 (85-250)||(15697245-15697410)
chr5 (104-175)||(16603596-16603668)
chr5 (73-211)||(15205672-15205811)
chr5 (73-164)||(18222522-18222613)
chr5 (89-155)||(23157792-23157858)
chr5 (109-264)||(16622570-16622717)
chr5 (87-260)||(22229847-22230021)
chr5 (210-264)||(17695356-17695410)
chr5 (113-185)||(22754963-22755036)
chr5 (146-186)||(24279598-24279638)
chr5 (146-186)||(24382576-24382616)
chr5 (209-264)||(18452705-18452760)
chr5 (104-156)||(24517414-24517466)
[»] chr3 (33 HSPs)
chr3 (73-264)||(21829026-21829218)
chr3 (85-264)||(11474887-11475068)
chr3 (75-264)||(23908164-23908354)
chr3 (104-264)||(19219104-19219266)
chr3 (73-244)||(26387758-26387930)
chr3 (73-164)||(8402545-8402636)
chr3 (73-230)||(26297778-26297934)
chr3 (74-174)||(30493249-30493349)
chr3 (110-264)||(18474236-18474391)
chr3 (153-260)||(26418829-26418937)
chr3 (85-238)||(33577775-33577930)
chr3 (60-264)||(13911281-13911478)
chr3 (84-264)||(19285139-19285319)
chr3 (98-186)||(26797221-26797308)
chr3 (107-264)||(25883166-25883324)
chr3 (104-164)||(2729613-2729673)
chr3 (209-255)||(19263809-19263855)
chr3 (102-260)||(25919369-25919519)
chr3 (112-184)||(27415236-27415309)
chr3 (85-156)||(5632536-5632607)
chr3 (213-264)||(10341957-10342008)
chr3 (98-165)||(16970293-16970360)
chr3 (209-260)||(16970628-16970679)
chr3 (87-159)||(4780687-4780759)
chr3 (105-156)||(10341856-10341907)
chr3 (85-164)||(27374446-27374525)
chr3 (73-142)||(1475297-1475366)
chr3 (87-144)||(12409501-12409558)
chr3 (73-185)||(12573319-12573432)
chr3 (73-185)||(13549783-13549896)
chr3 (74-159)||(23007065-23007150)
chr3 (103-147)||(4775719-4775763)
chr3 (104-164)||(21017937-21017997)
[»] chr1 (35 HSPs)
chr1 (107-264)||(25727802-25727961)
chr1 (107-264)||(25736210-25736369)
chr1 (105-264)||(31313613-31313773)
chr1 (84-264)||(26102097-26102278)
chr1 (106-264)||(11769887-11770047)
chr1 (74-264)||(27461074-27461266)
chr1 (85-264)||(26854213-26854391)
chr1 (88-264)||(52271138-52271315)
chr1 (114-264)||(25730464-25730616)
chr1 (60-259)||(15298768-15298968)
chr1 (73-260)||(30675513-30675701)
chr1 (98-252)||(34381762-34381920)
chr1 (73-264)||(15416866-15417059)
chr1 (73-249)||(21548677-21548854)
chr1 (73-255)||(18795210-18795393)
chr1 (88-264)||(19257699-19257874)
chr1 (105-264)||(18300896-18301057)
chr1 (73-184)||(25126509-25126620)
chr1 (102-264)||(25494382-25494536)
chr1 (78-264)||(30781794-30781981)
chr1 (73-263)||(26657505-26657696)
chr1 (73-156)||(12810351-12810434)
chr1 (73-184)||(18391111-18391222)
chr1 (160-264)||(25373862-25373967)
chr1 (84-164)||(13807747-13807827)
chr1 (107-264)||(23223475-23223635)
chr1 (73-119)||(25965414-25965460)
chr1 (74-164)||(50047211-50047301)
chr1 (87-174)||(25266329-25266417)
chr1 (216-264)||(31319504-31319552)
chr1 (209-264)||(9328334-9328388)
chr1 (209-264)||(23519662-23519716)
chr1 (209-264)||(50047341-50047396)
chr1 (73-185)||(8247630-8247743)
chr1 (138-202)||(1174000-1174064)
[»] chr6 (21 HSPs)
chr6 (105-264)||(26499740-26499900)
chr6 (61-264)||(9943043-9943247)
chr6 (102-260)||(16439516-16439675)
chr6 (108-251)||(12972291-12972435)
chr6 (112-264)||(9396500-9396652)
chr6 (73-227)||(24617541-24617695)
chr6 (162-260)||(33638402-33638501)
chr6 (104-156)||(16527950-16528002)
chr6 (98-264)||(14924311-14924478)
chr6 (100-163)||(20495790-20495853)
chr6 (209-264)||(30355483-30355538)
chr6 (1-264)||(26512672-26512938)
chr6 (1-264)||(26517788-26518054)
chr6 (104-184)||(32930447-32930527)
chr6 (84-165)||(1755555-1755636)
chr6 (118-191)||(22559181-22559253)
chr6 (216-260)||(33638259-33638303)
chr6 (213-264)||(24618053-24618104)
chr6 (105-156)||(30355386-30355437)
chr6 (73-187)||(14768240-14768354)
chr6 (73-184)||(15998540-15998652)
[»] chr4 (34 HSPs)
chr4 (1-259)||(10576407-10576669)
chr4 (60-258)||(26159772-26159971)
chr4 (114-264)||(33519100-33519251)
chr4 (121-264)||(31859794-31859938)
chr4 (87-261)||(9288253-9288428)
chr4 (112-249)||(29437539-29437677)
chr4 (75-265)||(17339706-17339897)
chr4 (84-191)||(21167769-21167876)
chr4 (109-265)||(15192268-15192425)
chr4 (85-264)||(23353664-23353839)
chr4 (74-264)||(25315125-25315316)
chr4 (113-264)||(5676268-5676421)
chr4 (73-258)||(47024665-47024842)
chr4 (129-265)||(13064511-13064648)
chr4 (121-264)||(17187252-17187394)
chr4 (109-264)||(19601863-19602019)
chr4 (73-264)||(13275635-13275830)
chr4 (60-148)||(24925821-24925909)
chr4 (81-260)||(46647233-46647412)
chr4 (110-264)||(34864189-34864342)
chr4 (104-175)||(22119706-22119777)
chr4 (73-262)||(27302807-27302996)
chr4 (104-264)||(17026590-17026751)
chr4 (77-175)||(10320202-10320301)
chr4 (73-184)||(21077262-21077373)
chr4 (213-264)||(22119791-22119842)
chr4 (137-187)||(13206647-13206697)
chr4 (84-185)||(4732790-4732891)
chr4 (217-260)||(5906660-5906703)
chr4 (209-260)||(7024116-7024167)
chr4 (84-175)||(20044218-20044309)
chr4 (145-187)||(12243698-12243740)
chr4 (98-164)||(18444304-18444370)
chr4 (131-175)||(30624953-30624997)
[»] chr2 (31 HSPs)
chr2 (73-260)||(17152182-17152371)
chr2 (73-264)||(21848967-21849158)
chr2 (108-264)||(31262063-31262218)
chr2 (85-251)||(19541078-19541245)
chr2 (73-264)||(18236196-18236388)
chr2 (84-264)||(24047422-24047604)
chr2 (73-264)||(30998800-30998992)
chr2 (105-264)||(39730508-39730668)
chr2 (87-264)||(21505032-21505211)
chr2 (84-263)||(15454433-15454605)
chr2 (121-264)||(27417156-27417301)
chr2 (153-264)||(14921932-14922044)
chr2 (121-263)||(17415058-17415201)
chr2 (89-157)||(27917985-27918053)
chr2 (84-262)||(18117023-18117201)
chr2 (84-264)||(18818737-18818923)
chr2 (85-184)||(17240831-17240928)
chr2 (73-264)||(35707832-35708024)
chr2 (85-264)||(24188007-24188190)
chr2 (85-165)||(34063839-34063919)
chr2 (102-153)||(30705260-30705311)
chr2 (85-184)||(22388732-22388827)
chr2 (218-264)||(31274131-31274177)
chr2 (81-175)||(31449994-31450088)
chr2 (87-156)||(1733143-1733212)
chr2 (104-169)||(32276503-32276568)
chr2 (87-155)||(21843006-21843074)
chr2 (88-148)||(28278434-28278494)
chr2 (73-184)||(35031731-35031843)
chr2 (212-258)||(17884542-17884588)
chr2 (149-248)||(1732656-1732756)
[»] scaffold0171 (1 HSPs)
scaffold0171 (87-264)||(21440-21619)
[»] scaffold0188 (1 HSPs)
scaffold0188 (105-264)||(26848-27009)
[»] scaffold0190 (1 HSPs)
scaffold0190 (85-164)||(11692-11771)
[»] scaffold0386 (2 HSPs)
scaffold0386 (210-264)||(11692-11746)
scaffold0386 (104-186)||(13043-13126)
[»] scaffold0065 (1 HSPs)
scaffold0065 (128-186)||(12328-12387)
[»] scaffold0011 (1 HSPs)
scaffold0011 (98-141)||(228202-228245)
[»] scaffold1026 (1 HSPs)
scaffold1026 (85-175)||(1817-1907)
[»] scaffold0282 (1 HSPs)
scaffold0282 (210-264)||(22507-22560)
[»] scaffold0113 (1 HSPs)
scaffold0113 (110-166)||(47813-47869)


Alignment Details
Target: chr7 (Bit Score: 353; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 388
Target Start/End: Complemental strand, 12358922 - 12358532
Alignment:
Q  1 attttagactatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||| |||||||||||||||||||||||||    
T  12358922 attttagactatgctttttgttattttctttgcataagaagacaaatatgtggtcacatagaggagttgtccaatgtttgagaaatattttgtatttttc 12358823  T
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12358822 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 12358723  T
Q  198 tatcttatgaagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaattgaagggcatggcctcatgcgccaaggcatatg 297  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12358722 tatcttatgaagatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatagaagggcatggcctcatgcgccaaggcatatg 12358623  T
Q  298 gccttatgcgcctaggcacatttgtgcggcaaaatgtaattttgcttgtttttaatgctggattgaaggaaaaagtcttgttcttctctct 388  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12358622 gccttatgcgcctaggcacatttgtgcggaaaaatgtaattttgcttgtttttaatgctggattgaaggaaaaagtcttgttcttgtctct 12358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 86 - 264
Target Start/End: Complemental strand, 5312858 - 5312679
Alignment:
Q  86 tttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 185  Q
    |||||||| || |||||||||||||||||||||| ||||||| || | ||| ||||| ||||||||||||||||||||||||||| |||| || ||||||    
T  5312858 tttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttttagtgataaatcatgtaaatc 5312759  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || |||   ||| |||   |||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  5312758 ggcaaaaataaacatcaagtgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaat 5312679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 3269051 - 3268868
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || |||||||||| || || ||||||| ||||||||||| |||||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  3269051 gtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaacttcgtatgtgttttaagtctttttagtgaga 3268952  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggttttt 255  Q
    ||| || |||||||| ||| ||| |||||  ||||| ||||||| ||||||||| |||| || |||| |||||| ||| |||||    
T  3268951 aatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagcttttt 3268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 110 - 260
Target Start/End: Original strand, 18496631 - 18496782
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa- 208  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| || ||| |||||| || || |||||||||||| |   | |||   ||||     
T  18496631 ttgtaattcatttttatcctaaatcatgcgacttcataggtgttttgagcctatttggtgagatatcatgtaaatcggaaaaacgggacatcgagtgaag 18496730  T
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| |||||||    
T  18496731 gatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaaga 18496782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 30405637 - 30405815
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || | |||||| || |||||||||| ||| |||||||| ||| ||||| |||||||||||||||| ||||||||||||||| || |||||    
T  30405637 ttttgtattgtttttatttgactcattgtaattcacttt-atcctaaaccatgcaactccataggtgttttgagt-tttttagtgagaaatcatgtaaat 30405734  T
Q  185 cggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| |||  || | ||| | ||||| ||| |||||||||||||||||| | |||| |||||||||||| |||||| |||||    
T  30405735 cggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaat 30405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 103 - 264
Target Start/End: Complemental strand, 24597059 - 24596897
Alignment:
Q  103 tgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    ||||||||||||||||| |||||||||||||||| ||||| | |||||||||| |||||||||||||||||||  | |||||||| ||| ||| | |||     
T  24597059 tgagtcgttgtaattcaattttatcctaaatcatgcaactccgtaggtgttttaagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatca 24596960  T
Q  203 tat-gaagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
      | ||||||| ||||||| |||||||||| | | |||||| ||||||   ||||||||||||    
T  24596959 cgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaat 24596897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 29544548 - 29544741
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgag 171  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||| ||||||||  | ||| | |||| ||||||||||| ||||| ||| ||    
T  29544548 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcacttttctcctaaattgtgcaattccataagtgttttgagtgttttttagtaag 29544647  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||| || |||||||  ||| ||| | |||  |||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29544648 gaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaagacaat 29544741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 20461733 - 20461573
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || | |||||||| || ||||| |||||||||||| ||| ||| |||||||||||  |||| | |||||||||| |||||||||||||||||    
T  20461733 gtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaacatgataggtgtttcgagtctttttagtgaga 20461634  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaaga 232  Q
    ||| || |||||||| |||  || | |||   |||| ||||||||||||||||||||||||    
T  20461633 aatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaaga 20461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 1074495 - 1074674
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc-tttttagtgagaaataatataaatc 185  Q
    ||||||| || ||||| || || ||||||||   ||||||||||||| || ||||| |||| |||||||| ||| ||||||||||||||| || |||||     
T  1074495 ttgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgttttgtgtcttttttagtgagaaatcatgtaaatt 1074594  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||||| | |||   | || ||||||||||||||| ||||||||  ||||||||||| |||||| |||||||||||    
T  1074595 ggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaagacaat 1074674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 9801946 - 9801772
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt-ttagtgagaaataatataaatc 185  Q
    |||||||||| ||| |  ||||||||||||||| |||||||||| || || ||| | |||||||||||||||| |||  |||||| |||| || ||||||    
T  9801946 ttgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatc 9801847  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |  ||| ||||| ||| | |||| ||||||||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  9801846 gacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 1255299 - 1255137
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| ||||  ||||||| || ||| | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || |||     
T  1255299 gtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgcaacttcataggtgttttgagtgttttgtaatgaa 1255200  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagat 233  Q
    |||| || ||||||   ||| ||||| |||  ||||| ||||||||||| ||||| |||||||    
T  1255199 aaattatttaaatcaacaaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagat 1255137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 17881572 - 17881457
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||| || || |||||||| | ||||||| |||||||| |||||| |||||| |||||||||||||||||||||| | || |||||    
T  17881572 ttttgtattattttcattcgaatcattgtaatttaattttatcataaatcatgcaacttaataggtattttgagtctttttagtgagaagtcatgtaaat 17881473  T
Q  185 cggaaaagcaaaatat 200  Q
    ||||||| ||| ||||    
T  17881472 cggaaaaacaagatat 17881457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 23124943 - 23125122
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 185  Q
    ||||||| || ||| | ||||||||||||||||  ||||||| ||||||| |||||  ||||||||||||||| |||| ||||||||||| || ||||||    
T  23124943 ttgtattgttttcactcgagtcgttgtaattcacatttatccaaaatcatacaactctataggtgttttgagtgttttctagtgagaaatcatgtaaatc 23125042  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |   || ||| | ||| | |||| |||| |||||||||||||||||| | ||||||||||| ||| || || ||||||||    
T  23125043 gaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattcttaaagacaat 23125122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 20470864 - 20470703
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatctt 203  Q
    ||||||||||||||| ||| | |||||||||| || || ||||| |||||||||| |||| |||||| |||  || |||||||  ||| ||| | |||      
T  20470864 agtcgttgtaattcactttcagcctaaatcatgcatctgcatagctgttttgagtgttttatagtgataaagcatgtaaatcgacaaatcaagacatcgc 20470765  T
Q  204 atgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||| |||||||||| |||| ||||||| | |||||||||||||||||| |||||||||||    
T  20470764 atgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaat 20470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 265
Target Start/End: Complemental strand, 9761487 - 9761308
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 185  Q
    |||||||||| ||| |  ||||||||||||||| |||||||||| || || ||| | |||||||||||||||| |||  |||||| |||| || ||||||    
T  9761487 ttgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatc 9761388  T
Q  186 ggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 265  Q
    |  ||| ||| | |||   ||||| |||||||||||||||||||||| | ||||||||||| ||||||||| |||| ||||    
T  9761387 gacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatt 9761308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 264
Target Start/End: Complemental strand, 7372640 - 7372461
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatc-ctaaatcattcaacttcataggtgttttgagt-ctttttagtgagaaataatataa 182  Q
    ||||||||| || ||||| |||||||||||||||| ||||||| | ||||||| |||||||||||||||||| |||  |||||||||||||||  | |||    
T  7372640 ttttgtattgttttcattcgagtcgttgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttttagtgagaaatcttgtaa 7372541  T
Q  183 atcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| | ||| ||| |||||  ||||| |||||||||||| ||| | |||| | ||| | ||||||||| ||||| ||||||||    
T  7372540 atcagcaaatcaagatatc--atgaaggatcaaggatataaagctggaagttcaat-gatcttagaagatttttaaagacaat 7372461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 8309103 - 8309005
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 185  Q
    ||||||| || ||||||||||| |||| ||| | |||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||| || ||||||    
T  8309103 ttgtattgttttcatttgagtcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttttagtaagaaatcatgtaaatc 8309005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 7815352 - 7815443
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    |||| ||||| || |||||||||| ||| | | || ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  7815352 gtttaagaaacatattgtatttttttcactcgggtggttgtaattcagttttattctaaatcatgcaacttcataggtgttttgagtgtttt 7815443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 21545775 - 21545720
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  21545775 gatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaat 21545720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 7326915 - 7326834
Alignment:
Q  114 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaa 195  Q
    |||||| ||| ||||  |||||| |||||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||    
T  7326915 aattcagtttcatccctaatcatgcaacttgataggtgttttgagtcattttagtgagaaatcatataaatcagcaaagcaa 7326834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 7142158 - 7142286
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||||||||||||||| |||||||| | ||||| ||||| |||||||||||| ||| |||| ||||||||||| || |||||||  ||| ||| | |||     
T  7142158 gagtcgttgtaattcacttttatccaagatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatca 7142257  T
Q  203 tatgaa-gatcaaggatatgaagattgaa 230  Q
      |||| |||||| |||||||||||||||    
T  7142258 cgtgaaggatcaaagatatgaagattgaa 7142286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 22532729 - 22532538
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaa--tcattcaacttcataggtgttttgagtctttttagtga 170  Q
    ||||||| || ||||| |||| || ||||| || ||| | ||||||| ||||||||||||  ||||  ||||| ||  ||||| ||||| ||||||||||    
T  22532729 gtttgaggaacattttctattgttttcattggattcgctataattcacttttatcctaaaaatcatggaacttgat--gtgttatgagtatttttagtga 22532632  T
Q  171 gaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||| || |||||||| ||| ||| | |||  |||| | ||| |||||| ||||| |||| || |||||||||||||| |||||||||||||||    
T  22532631 gaaatcatgtaaatcggcaaa-caagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaat 22532538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 4977894 - 4977831
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 148  Q
    |||||||||||| |||||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  4977894 ttttgtatttttatcattcaagtcgttgtaattcacttttatcctaaattatgcaacttcatag 4977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 14649663 - 14649717
Alignment:
Q  210 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaat 14649717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 2632488 - 2632436
Alignment:
Q  107 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  2632488 tcgttgtaattcagttttatccaagatcatgcaacttcataggtgttttgagt 2632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 37144961 - 37145032
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||||| || |||||  ||||||||||||  |||||||||||||||||| ||||| | |||||||||||    
T  37144961 ttttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgttttg 37145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 2353279 - 2353229
Alignment:
Q  125 atcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||||||||||    
T  2353279 atcctaaatcatgcaactccataggtgttttgggcctttttagtgagaaat 2353229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 21545885 - 21545803
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 155  Q
    ||||||| || || ||||||| || ||| | |||||||||||| ||| |||||||||||||||| ||||| ||||||| ||||    
T  21545885 gtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacataggtttttt 21545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 4828857 - 4828945
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatat 200  Q
    |||||||| | |||||||||||||||| ||||| ||||| ||  ||||||||||||| |||||||| || || |||| |||| ||| ||||    
T  4828857 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatat 4828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 7494863 - 7494917
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||||||||||||||| | |||||||||||||||||   ||||||||||    
T  7494863 gatcaaggatatgaagattgaag-ttaatggttcttagaaggtccatgaagacaat 7494917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 10292797 - 10292864
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttt 154  Q
    |||||||||| ||| | |||||||||||||||| |||||||| | ||||| ||||  |||||||||||    
T  10292797 ttgtatttttttcaatcgagtcgttgtaattcagttttatccaagatcatgcaacaccataggtgttt 10292864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 29291725 - 29291990
Alignment:
Q  1 attttagactatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttc 97  Q
    ||||||| ||||| ||||||||||||||||| |||  |||| |||||  |  |||| ||||||   || || |  ||||||| ||| |||| |||||||     
T  29291725 attttaggctatgttttttgttattttcttttcatttgaaggcaaattagaagtcatatagaggagttatcaatggtttgaggaattttttatattttt- 29291823  T
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||||||||||||||||| || |||||||||||||||| |||||| ||| || ||||||||||||||||| |||||| || |||||||| ||| ||| |    
T  29291824 tcatttgagtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttgagtctttttagtaagaaatcatgtaaatcggcaaaacaaga 29291923  T
Q  198 tatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 263  Q
    ||||   ||||| ||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  29291924 tatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaa 29291990  T

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Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 30543802 - 30543962
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || |||||||||| ||||||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| ||||||||| || |||||    
T  30543802 ttttgtattgttttcatttgagttgttgtaattcacttttatcctaaatcatgcaattatataggtgttttgagtctttttggtgagaaatcatgtaaat 30543901  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttctt 244  Q
    ||| ||| ||| |||||  ||||| |||  |||||||||||||||||| | ||||||||||    
T  30543902 cggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctt 30543962  T

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Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 5153800 - 5153979
Alignment:
Q  86 tttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 185  Q
    |||||||| || ||||| ||||| |||||||||| ||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| || |||||     
T  5153800 tttgtattattttcattcgagtcattgtaattcagttttatcttaaatcattcaactcgataggtgttttgagtctttttagtaagaaatcatgtaaata 5153899  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || ||| ||| | ||    |||| |||| |||||||||||||||||||| |||| || || |||||||||||||||||||    
T  5153900 ggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaat 5153979  T

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Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 6888271 - 6888086
Alignment:
Q  77 gagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaata 176  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| || ||||||||||||| ||||| |  |||||||||||||| ||||||||||||||     
T  6888271 gagaaacattttgtattttt-tcatttgagtcattgtaattcagttctatcctaaatcatgcaactcc--aggtgttttgagtcattttagtgagaaatc 6888175  T
Q  177 atataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || ||||||   ||| ||||  |||   || || ||| |||||||||||||||||||| ||||||||||| || || ||||||||||||    
T  6888174 atgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaat 6888086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 265
Target Start/End: Complemental strand, 14424873 - 14424705
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||  || ||||||||||||||| || |||||||| ||| ||| |    
T  14424873 tcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgttttaggtttttttagtgagaaatcatgtaaatcggcaaaacaaga 14424774  T
Q  198 tatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 265  Q
     | |    ||| |||  | |||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  14424773 caacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaatt 14424705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 254
Target Start/End: Original strand, 28074555 - 28074724
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||| ||||||||| |||||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||||    
T  28074555 ttttgtattgttttcatt-gagtcgttgcaattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttttagtgagaaatcatgtaaat 28074653  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttt 254  Q
      | ||| ||| | |||  ||||| ||||||||||||||||| ||||||| | |||| ||||  |||||||    
T  28074654 atgcaaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggtttt 28074724  T

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Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 10867017 - 10867119
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||| |||||||  ||||||| ||||| || ||||| ||||| ||||||||||||||    
T  10867017 gtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactccaaaggtgctttgaatctttttagtgaga 10867116  T
Q  173 aat 175  Q
    |||    
T  10867117 aat 10867119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 28292185 - 28291994
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || ||||| | || || |||||||||| ||| ||||||| ||||||||||| | || |||||||| | |||||||| || ||||||||||||    
T  28292185 gtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgttttgtgtttttttagtgaga 28292086  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    | | || |||||||  |||  || | |||  |||||| ||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28292085 a-tcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaat 28291994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 11437460 - 11437641
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||||| || || ||||| |||||||| ||||||| ||| ||| ||  |||| ||||| |||| || |||||||||||||||||||||||| || |||||    
T  11437460 ttttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtctttttagtgagaaatcatgtaaat 11437559  T
Q  185 cggaaaagcaaaatatcttatgaa--gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| ||| ||| | |||   ||||  ||||||||||||||| ||||||| | |||||||||||||||   ||||||||||||    
T  11437560 cggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaat 11437641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 258
Target Start/End: Complemental strand, 30851173 - 30850999
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||| |||| || ||||| || |||||||||||||  ||||||||||||||| |||||  ||||||||||||  ||| | |||||||||||  | |||||    
T  30851173 ttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgttttggatctatctagtgagaaatcgtgtaaat 30851074  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    |   ||||||| | ||||  |||| ||||||||||||||||||||||||| || ||||||||||| || ||||||    
T  30851073 catcaaagcaagacatctagtgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaa 30850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 27097887 - 27097771
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc--tttttagtga 170  Q
    ||||||| || || ||| ||| || |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||  ||||  ||||||||||    
T  27097887 gtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgtttaaagtctttttttagtga 27097788  T
Q  171 gaaataatataaatcgg 187  Q
    ||||| || ||||||||    
T  27097787 gaaatcatgtaaatcgg 27097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 28260364 - 28260263
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || |||||| ||||||||||||| |  |||||||||||||||   ||| |||||||||||||||||||||||||||||||| || ||||    
T  28260364 attttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccataggtgttttgagtctttttagtgagaaatcatgtaaa 28260265  T
Q  184 tc 185  Q
    ||    
T  28260264 tc 28260263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 31436525 - 31436620
Alignment:
Q  90 tatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatc 185  Q
    ||||||| ||||| |||||  ||||||| | |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||    
T  31436525 tatttttttcattcgagtcagtgtaatttagttttatcctaaatcatgcaactacataggtgttttgaatctttttagtgagaaatcatgtaaatc 31436620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 16052332 - 16052170
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||||||| |||||||  |||| | |||||||| |||||  ||||||||||||||| |||| ||||||||||| || ||||||   ||| ||| | |||     
T  16052332 gagtcgttataattcacatttaccttaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatca 16052233  T
Q  203 tatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     |||||| || ||||||||||||||| ||||  |||| |||||||||||||||||||||||||    
T  16052232 catgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaagacaat 16052170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 24584810 - 24584707
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| ||| ||||||||| || ||||| ||||| |||||||||||||||||| |||||||| |||||  |||||| |||||||| |||| |||||||    
T  24584810 gtttgaggaattttttgtattgttttcattcgagtcattgtaattcatttttatcataaatcatgcaactctataggtattttgagttttttgtagtgag 24584711  T
Q  172 aaat 175  Q
    ||||    
T  24584710 aaat 24584707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 260
Target Start/End: Original strand, 24696641 - 24696799
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||||||||||||| | || ||||||||||||| ||| |||| ||||||||| ||| |||| |||| |||||| || ||||||   ||| ||| | |||     
T  24696641 gagtcgttgtaatttacttctatcctaaatcatacaatttcacaggtgtttttagtgttttatagtaagaaatcatgtaaatcaacaaatcaagacatca 24696740  T
Q  203 tatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
     || ||| |||||||||||||||||||||||  | | ||||||||||||||||||||||    
T  24696741 cataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaaga 24696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 12774902 - 12774810
Alignment:
Q  100 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt-ctttttagtgagaaataatataaatcggaaaa 191  Q
    ||||||||| |||||||| | |||||||||||||||| |||   |||||||||||| ||| ||||||||| ||||||||| ||||||||||||    
T  12774902 atttgagtcattgtaatttagttttatcctaaatcatgcaataccataggtgtttttagtactttttagtaagaaataatgtaaatcggaaaa 12774810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 264
Target Start/End: Complemental strand, 13583535 - 13583413
Alignment:
Q  143 tcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggtt 241  Q
    |||||| || ||||||||||||||||||||||| || |||||||  ||| ||| | |||   ||||| ||| ||||||||| |||||||| | |||||||    
T  13583535 tcatagttggtttgagtctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggtt 13583436  T
Q  242 cttagaaggtttttgaagacaat 264  Q
    |||||||| | ||||||||||||    
T  13583435 cttagaagatatttgaagacaat 13583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 32239316 - 32239509
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || | | ||||||||||| |||||| ||||||| |||||||| ||||| ||||  |||||||||| |||| |||||||    
T  32239316 gtttgagtaacatattgtattgtttttacttgagtcgttgcaattcacttttatcttaaatcatgcaactccataaatgttttgagtgttttgtagtgag 32239415  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||  | ||||| |  ||| | | | |||  ||||| ||| ||||||||||||||||||| | ||||||| ||| |||||| || ||||||||    
T  32239416 aaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttcttaaagacaat 32239509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 35135477 - 35135416
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 165  Q
    ||||| ||||||||||||||||||||||||||| ||||| || | |||||||||||||||||    
T  35135477 gagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgagtcttttt 35135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 22894579 - 22894425
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 208  Q
    |||| ||||| ||||||| || ||||||||||| ||||||| |||| ||| || | ||||||||||| || ||||||| |||| ||| |||||  |||||    
T  22894579 ttgtgattcacttttatcttagatcattcaactccataggtatttttagtgttctatagtgagaaatcatgtaaatcg-aaaatcaagatatcacatgaa 22894481  T
Q  209 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    | ||||| ||||| |||||||||  | ||| ||||||||| ||||||||||||||||    
T  22894480 ggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaagacaat 22894425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 28859275 - 28859132
Alignment:
Q  123 ttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatat 220  Q
    |||||||||||||  ||||  |||| ||||||||||  |||| |||| |||||| || ||||| |  ||| | ||| |||  ||||| ||||||||||||    
T  28859275 ttatcctaaatcacgcaacaccatatgtgttttgagggttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatat 28859176  T
Q  221 gaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     |||||| ||||| ||||||||||||| ||||||||||||||||    
T  28859175 caagattaaagatcaatggttcttagatggtttttgaagacaat 28859132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 5570226 - 5570136
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    |||||| || || ||||||| || ||| | |||| ||||||||||| |||||||||| ||||| ||||||| |||||||||||||| ||||    
T  5570226 tttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaacttcgtaggtgttttgagtgtttt 5570136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 41505623 - 41505530
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta 166  Q
    ||||||| ||||||||||||| || ||||| |||| ||||||||||| ||| || |  |||||| |||||||||||  || |||||||||||||    
T  41505623 gtttgaggaatattttgtattattttcattcgagttgttgtaattcactttcatacctaatcatgcaacttcatagacgtgttgagtcttttta 41505530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 12956518 - 12956698
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || || ||||||| || ||| | ||||| | |||||||| ||||||||||||||||  ||||  ||||||||||||        ||||||      
T  12956518 gtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcacttttatcctaaatcatgtaactctataggtgttttg--------tagtgaag 12956609  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    ||| ||||||||||  ||| ||| |||||  ||||||| ||||||||||||||| ||||||| ||| ||| || |||||||||| ||||    
T  12956610 aatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaaga 12956698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 28901426 - 28901243
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || || ||||||| || ||| | ||||||||||||||| ||||||||||| || || ||||| | ||| |||||||        |||||| |    
T  28901426 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgtttttatcctagataatgcaactccttagatgttttg--------tagtgata 28901335  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| || ||||  ||| ||| | ||| |||||||| |||| |||||||||||||||  | ||||||||||| ||||||| ||||||||||    
T  28901334 aataatgtacatcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaat-tcaatggttcttataaggtttctgaagacaat 28901243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 12357574 - 12357620
Alignment:
Q  145 ataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 191  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||    
T  12357574 ataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaa 12357620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 12358702 - 12358748
Alignment:
Q  145 ataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 191  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||    
T  12358702 ataggtgttttgagtctttttagtgagaaattatgtaaatctgaaaa 12358748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 13081992 - 13081938
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag 158  Q
    |||| ||||||||||| || ||||||| ||||| |||||||||||||||||||||    
T  13081992 gagtagttgtaattcagttgtatcctagatcatgcaacttcataggtgttttgag 13081938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 16054334 - 16054436
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataa 182  Q
    |||||||||| || ||| | |||| |||||||||||||||||||||| |||||  |||| ||||| |||||||| | |||| ||||||| ||| || |||    
T  16054334 attttgtattgttttcactcgagttgttgtaattcatttttatcctagatcataaaactccatagatgttttgattgttttgtagtgaggaatcatgtaa 16054433  T
Q  183 atc 185  Q
    |||    
T  16054434 atc 16054436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 31232124 - 31232182
Alignment:
Q  112 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtga 170  Q
    ||||||||  ||||||||||||||| ||||| ||||||||||||| || ||||||||||    
T  31232124 gtaattcagctttatcctaaatcatgcaactccataggtgttttgcgtttttttagtga 31232182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 28902118 - 28902175
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatccta 130  Q
    |||||||||| || ||||||| || ||||| |||||||||||||||| ||||||||||    
T  28902118 gtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatccta 28902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11310203 - 11310149
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||||||||||| ||| | |||| ||||||||||||||||||| |||||    
T  11310203 gatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaat 11310149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 20694681 - 20694861
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||| ||||| |||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||| |||||| || |||||    
T  20694681 ttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgttttgagtctttttagtaagaaatcatgtaaat 20694780  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| ||| ||| | ||| |||||| ||| | ||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  20694781 cggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaat 20694861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 264
Target Start/End: Original strand, 26070436 - 26070695
Alignment:
Q  9 ctatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttctcatttga 105  Q
    ||||| |||| ||||||||||||||||   ||| |||||| | |||||  |||||   ||||| | | |||||| || |||| ||||| || ||||| ||    
T  26070436 ctatgtttttagttattttctttgcattttaaggcaaataagaggtcatttagaggagttgtcaatcatttgaggaaaatttagtattgttttcattcga 26070535  T
Q  106 gtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttat 205  Q
    ||   ||||||||| ||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||| || ||||| || ||| ||| | |||  ||    
T  26070536 gttaatgtaattcagttttatcataaatcatgcaactccataagtgttttgagtctttttagtgagaaatcatgtaaattggcaaaacaagacatcacat 26070635  T
Q  206 gaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| |||||||||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  26070636 gaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaagacaat 26070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 84 - 264
Target Start/End: Complemental strand, 7742944 - 7742763
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || || || ||||| |||||||||| ||||||||||||||||  ||  ||||| ||||||||||| |||||| |||||||| || ||||    
T  7742944 attttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatgtaaaatcatatgtgttttgagtttttttaatgagaaatcatgtaaa 7742845  T
Q  184 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || | ||| ||||| |||   ||||| ||| | |||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  7742844 tcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaat 7742763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 24411015 - 24410830
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || |||||||||| || |||||||||||||||||||||| |||||||||||||| | ||||||   ||||||||||||| ||||||||||||    
T  24411015 gtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttgagtatttttagtgaga 24410916  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttga 257  Q
    ||| || | ||| || |||  || | |||  ||||| |||| ||||| |||||||| ||||| ||||||||||| ||||| |||||    
T  24410915 aatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 73 - 256
Target Start/End: Complemental strand, 25594778 - 25594593
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| | |||| |||||| |||||||||||||||||| || |||||||||| ||||||||||| |||| |||||||    
T  25594778 gtttgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaacttcatatgtgttttgagtgttttatagtgag 25594679  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttg 256  Q
    |||| || ||||||| ||||  || | |||  ||||| |||||||||||||||||||||| || ||||| | ||||||||||||||    
T  25594678 aaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttg 25594593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 25367654 - 25367742
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaag 192  Q
    ||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  25367654 gagtcgttgaaattcagttttatcataaatcatgcaacttcataggtgttttgagtctttttagtgagaaatcatgtaaatcggaaaag 25367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 264
Target Start/End: Complemental strand, 11274368 - 11274223
Alignment:
Q  121 ttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggat 218  Q
    |||||||||||||||| ||||| |||||||||||||||| |||| |||| |||||| || || ||||  ||| ||| | |||  |||||| |||||||||    
T  11274368 ttttatcctaaatcatgcaactccataggtgttttgagtgttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggat 11274269  T
Q  219 atgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  11274268 atgaagattgaagaccaatggttcttagaaggtctttgaagacaat 11274223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 260
Target Start/End: Original strand, 18178162 - 18178319
Alignment:
Q  106 gtcgttgtaattcatttttatcctaaatcatt-caacttcataggtgttttgagtctttttagtgagaaataatataaatcgg-aaaagcaaaatatctt 203  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||| || |||| ||| | | |      
T  18178162 gtcgttgtaattcagttttatcctaaatcattgcaacttcataggtatttttagtctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgc 18178261  T
Q  204 atgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    ||||| |||| |||||||||||||||||||  ||| |||||| |||||| ||||||||    
T  18178262 atgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaaga 18178319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 16634075 - 16634264
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    |||||||||| || ||||||| || ||| | |||||||||||||||| |||||| ||||||||| |||||  ||||||||||||| | ||||  ||||||    
T  16634075 gtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaactctataggtgttttgaatgttttgcagtgag 16634174  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||| ||||||||||  ||| ||| | |||   |||| || |||  |||||||| |||||||  ||||||||||||||||||||||||||    
T  16634175 aaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaaga 16634264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 26330146 - 26329963
Alignment:
Q  81 aatattttgtatttttctcatttgagtc-gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataat 178  Q
    ||||| ||||||| || ||| ||||| | ||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||| ||||  ||||| ||    
T  26330146 aatatattgtattgttttcacttgagccagttgtaattcccttttatcctagatcatgcaacttcataggtgttttgagtgttttgtagt--gaaatcat 26330049  T
Q  179 ataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||||| | |||| ||| | |||  ||||| ||||||||||||||||||||||| | |||||| |||||||||||||| ||||||||    
T  26330048 gtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaat 26329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 30790832 - 30790919
Alignment:
Q  100 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 187  Q
    |||||||||||| ||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| |||| || ||||||||    
T  30790832 atttgagtcgttataattcagttttatcctaaattatccaacttcattggtgttttgagtctttttagtgaaaaattatgtaaatcgg 30790919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 260
Target Start/End: Complemental strand, 11997932 - 11997790
Alignment:
Q  121 ttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaag-ga 217  Q
    |||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||  || |||||||| | ||||| | ||||||| || ||||||| ||    
T  11997932 ttttatactaaatcatgcaacttcataggtgttttgagttttttttagtgagaaaacatgtaaatcggcagagcaagacatcttattaaggatcaagaga 11997833  T
Q  218 tatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||||| ||||||| |||| || ||||||||||||| ||||    
T  11997832 tatgaagaatgaagatcaatgatttttagaaggtttttaaaga 11997790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 19763964 - 19763817
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||||||| |  |||| |||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||| || |||||    
T  19763964 ttttgtattgttttcatttgaggcaatgtagttcagttttatcctaaatcatgcaacttcat--gtgttttgagtctttttagtgagaaatcatgtaaat 19763867  T
Q  185 cggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagat 233  Q
    ||| ||| | | | |||   ||||| |||||||| |||||||||||||||    
T  19763866 cggcaaaacgagacatcaagtgaagaatcaaggaaatgaagattgaagat 19763817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 17027556 - 17027748
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||| ||| || ||| |||||||||||||||||| |||||||||||||||  ||||| |||||||||||||| | ||||    ||||    
T  17027556 gtttgaggaacatattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactccataggtgttttgactgttttgccatgag 17027655  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| || ||||||| |||| ||| | |||   || |||||||| |||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  17027656 aaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaag-ttaatgcttcttagaaggttcttgaagacaat 17027748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 263
Target Start/End: Original strand, 24841782 - 24841973
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| | |||||||||||| ||| |||||||||| |||||  |||| |||||||||||| ||| |||| |||||||    
T  24841782 gtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactccataggtgtttttagtgttttgtagtgag 24841881  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 263  Q
    |||| || ||||| | |||| ||| | | |   |||| |||||||||||||  |||||||| | |||||||||||||||| ||||||||||||    
T  24841882 aaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaagacaa 24841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 19331540 - 19331651
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||  ||||||||| |  ||||| |||||||||||||| | |||||||||||||||| ||| | |||  ||||||||||||||||| ||||||    
T  19331540 gtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcctaaatcatgcaattccat--gtgttttgagtcttttttgtgaga 19331637  T
Q  173 aataatataaatcg 186  Q
    ||| || |||||||    
T  19331638 aatcatgtaaatcg 19331651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 29150977 - 29150890
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    ||||||| || ||| |||| || |||||||||||||||||| |||||||| ||| |||||| ||||||||||| |||||||||||||||    
T  29150977 ttgtattattttcacttgaatcattgtaattcatttttatcttaaatcatgcaatttcataagtgttttgagt-tttttagtgagaaat 29150890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 20083494 - 20083688
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc--tttttagtga 170  Q
    ||||||| || ||||| |||| || | ||| ||||  |||||||||| || ||||||||||||| ||| | |||||||||||||||||  ||||||||||    
T  20083494 gtttgaggaacattttttattgtttttattcgagtatttgtaattcagttctatcctaaatcatgcaattccataggtgttttgagtctttttttagtga 20083593  T
Q  171 gaaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     |||| || |||||||| ||| ||||| |||   || ||||| ||||||||||| | ||||| | ||||||| ||| || || |||||| |||||    
T  20083594 aaaattatgtaaatcggcaaaacaaaacatcacgtgaaagattaaggatatgaaaaatgaagttcaatggtttttataaagtatttgaaaacaat 20083688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 25680625 - 25680708
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  25680625 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgcaacttcataggtgttttg 25680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 30072218 - 30072337
Alignment:
Q  147 aggtgttttgagt-ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttctt 244  Q
    ||||||||||||| |||| ||||| ||||| |||| |||||  ||| ||| | |||  |||||| ||||| |||||||||||||||||| ||||||||||    
T  30072218 aggtgttttgagtgctttgtagtgggaaatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttctt 30072317  T
Q  245 agaaggtttttgaagacaat 264  Q
    | ||||||||| ||||||||    
T  30072318 aaaaggtttttaaagacaat 30072337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 85 - 250
Target Start/End: Complemental strand, 15697410 - 15697245
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||||||| ||||| |||||| |||||||| ||||||| || ||  |||||| ||||||||||||||| | |||||| | ||||||    
T  15697410 ttttgtattgttttcatttgagacgttgcaattcagttttatccgaaatcatgcatctctataggtattttgagtctttttattaagaaatcagataaat 15697311  T
Q  185 cggaaaagcaaaatatcttatgaagatcaaggatatgaagattgaagataaatggttcttagaagg 250  Q
    | | ||| ||| | ||| | ||| ||   |||||||||| ||||||||| |||  || ||||||||    
T  15697310 ccgtaaaacaagacatcatgtgaggacttaggatatgaaaattgaagatcaatatttattagaagg 15697245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 16603668 - 16603596
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaat 175  Q
    |||||||||||||| | ||||| |||||||||| ||| |||||||||||||||||| |||| |||||||||||    
T  16603668 gagtcgttgtaattaaattttagcctaaatcatgcaatttcataggtgttttgagtgttttctagtgagaaat 16603596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 15205672 - 15205811
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| | |||||||||||||||| |||| ||||| ||||| ||| | |||||||||||||||| ||||  ||||||    
T  15205672 gtttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaattccataggtgttttgagtgttttgcagtgag 15205771  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaagat 211  Q
     |||||| ||||||   ||| ||||| ||||| |||||||    
T  15205772 gaataatgtaaatcatcaaatcaaaacatcttgtgaagat 15205811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 18222522 - 18222613
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    |||||||||| || ||||||| || | | | ||||| |||||||||| |||||||||||||||| ||| | |||||||||||||||| ||||    
T  18222522 gtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatcctaaatcatgcaaatccataggtgttttgagtgtttt 18222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 23157858 - 23157792
Alignment:
Q  89 gtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 155  Q
    ||||| || |||||||||||||||||||||| ||||||| |||||||| ||| | ||||||||||||    
T  23157858 gtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaaatgcataggtgtttt 23157792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 16622717 - 16622570
Alignment:
Q  109 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 208  Q
    |||||||| || |||||||||| ||||| |||||||||||||||||||         |||||||||| || ||||| |  ||| ||| | |||  |||||    
T  16622717 gttgtaatacacttttatcctagatcatgcaacttcataggtgttttgc--------agtgagaaatcatgtaaattgacaaatcaagacatcacatgaa 16622626  T
Q  209 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    | || ||||||||||||||||||||  | |||||||||||||| |||||||||||||    
T  16622625 ggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaagacaat 16622570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 260
Target Start/End: Original strand, 22229847 - 22230021
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 185  Q
    ||||||| || ||| |||||||||||||||||| |||||||||| | ||| ||||| || | |||||||| || |||| ||||||| ||| || ||||||    
T  22229847 ttgtattgttttcacttgagtcgttgtaattcagttttatcctagaccatgcaactccacaagtgttttgggtattttgtagtgaggaatcatgtaaatc 22229946  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
       ||| ||| | |||   |||| |||||| |||||| | ||||||||| || ||||||||||||||| |||||||    
T  22229947 aacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttgaaga 22230021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 17695410 - 17695356
Alignment:
Q  210 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||| |||||| | ||||||| ||||||| ||||||||||||||||||||||    
T  17695410 atcaaggttatgaataatgaagatcaatggttattagaaggtttttgaagacaat 17695356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 22754963 - 22755036
Alignment:
Q  113 taattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 185  Q
    ||||||| |||||||||| || || |||||||||||||||||||||| ||||  |||||||||| || ||||||    
T  22754963 taattcagttttatcctagattatgcaacttcataggtgttttgagtgttttgaagtgagaaatcatgtaaatc 22755036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 24279638 - 24279598
Alignment:
Q  146 taggtgttttgagtctttttagtgagaaataatataaatcg 186  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  24279638 taggtgttttgagtcattttagtgagaaatcatataaatcg 24279598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 24382576 - 24382616
Alignment:
Q  146 taggtgttttgagtctttttagtgagaaataatataaatcg 186  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  24382576 taggtgttttgagtcattttagtgagaaatcatataaatcg 24382616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 18452760 - 18452705
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| |||||||| ||||||||| ||||||||||| ||||||||| || |||||    
T  18452760 gatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaat 18452705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24517414 - 24517466
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||||||||||||  |||||||| ||||||  |||| |||||||||||||    
T  24517414 gagtcgttgtaattcacatttatccttaatcatgtaactccataggtgttttg 24517466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 21829218 - 21829026
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || |||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||| ||||| |||||||||    
T  21829218 gtttgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaacttcatatgagttttgggtcttgttagtgaga 21829119  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||  | |||||||   || ||| | |||  |||||| |||||||||||||||||||||||| |||||||| | |||||| ||||||||||||    
T  21829118 aatcttgtaaatcgtcgaaacaagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaat 21829026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 11474887 - 11475068
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc-tttttagtgagaaataatataaa 183  Q
    ||||||||| || ||||| || ||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| || ||||    
T  11474887 ttttgtattattttcattcgactcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttttgagtcttttttagtgagaaatcatgtaaa 11474986  T
Q  184 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| ||| ||| | |||  ||||| |||| | ||||||| |||| ||||||||||||||||||||| | ||||||||||||    
T  11474987 tcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaagacaat 11475068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 264
Target Start/End: Complemental strand, 23908354 - 23908164
Alignment:
Q  75 ttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaa 174  Q
    ||||| || |||||||||| || ||||| || ||||||||||||  |||||||| |||| || ||| |||||||||| ||||||||||| ||| ||||||    
T  23908354 ttgaggaacattttgtattgttttcattcgattcgttgtaattcccttttatccaaaataatgcaatttcataggtgctttgagtctttctagggagaaa 23908255  T
Q  175 taatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    | || |||| ||| ||||||| | |||| ||||| ||||||| ||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  23908254 tcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaat 23908164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 19219266 - 19219104
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||||||||||||||| |||||||| ||||||| ||||  ||||  |||||||||| |||| ||||||| ||| || ||||||   ||| ||| | |||     
T  19219266 gagtcgttgtaattcacttttatccaaaatcatgcaacaccataaatgttttgagtgttttgtagtgaggaatcatgtaaatcttcaaaccaagacatca 19219167  T
Q  203 tatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19219166 catgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaat 19219104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 26387930 - 26387758
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||  ||||||||| || ||||||| ||||| |||||| | |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  26387930 gtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagttttatcctaaatcatgcaactccatagatgttttgagtctttttaatgaga 26387831  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttctt 244  Q
    ||| || |||||| |  || ||| | |||   |||| |||||| |||||||| ||||||||| ||||||||||    
T  26387830 aatcatgtaaatcagctaaacaagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttctt 26387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 8402636 - 8402545
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||||| || | |||||||| || ||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  8402636 gtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactccataggtgttttgagtctttt 8402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 26297778 - 26297934
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||  |||| |||| || ||||| |||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||| |||||||| |    
T  26297778 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaacttcata--tgtgttgagtctatttagtgata 26297875  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaa 230  Q
    ||| || |||||||| ||| ||| | |||   |||| |||| |||||||||||||||||    
T  26297876 aatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaagattgaa 26297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 30493349 - 30493249
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaa 173  Q
    |||||||||  ||||||||| || ||||| ||||||||||| || | |||||||||||||||| ||| | ||| ||||||||||||||||||||||||||    
T  30493349 tttgagaaactttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttttagtgagaa 30493250  T
Q  174 a 174  Q
    |    
T  30493249 a 30493249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 264
Target Start/End: Original strand, 18474236 - 18474391
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa- 208  Q
    |||||||||| | |||||||||||||| ||||| ||||||||||||||||||||| |||||||||| || |||||||| ||  ||| | ||   |||||     
T  18474236 ttgtaattcactgttatcctaaatcatgcaactccataggtgttttgagtcttttcagtgagaaatcatgtaaatcgggaacacaagacattacatgaag 18474335  T
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| | ||| | |||||||||  | |||||| |||||||||| ||||||||||||    
T  18474336 gatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaat 18474391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 260
Target Start/End: Original strand, 26418829 - 26418937
Alignment:
Q  153 tttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggt 251  Q
    ||||| ||||||||||||||||| || ||||||||||||  || | |||  |||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  26418829 tttgaatctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggt 26418928  T
Q  252 ttttgaaga 260  Q
    |||| ||||    
T  26418929 ttttaaaga 26418937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 238
Target Start/End: Original strand, 33577775 - 33577930
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || | |||||| || ||||||||||||| ||||||||||||| |||| |||| |||| ||||||||||||||  || |||  || |||||    
T  33577775 ttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaacctcattggtggtttgagtctttttaaagaaaaaacatgtaaat 33577874  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaagg-atatgaagattgaagataaatg 238  Q
    ||| |||| || | |||  ||||| |||||||| ||||||||| ||||||||||||    
T  33577875 cggcaaagtaagacatcacatgaaggatcaaggtatatgaagaatgaagataaatg 33577930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 264
Target Start/End: Original strand, 13911281 - 13911478
Alignment:
Q  60 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    ||||||||| |  ||||||| || || | ||||| || ||| |||| || |||||||||| |||||||||| ||||| |||||||||| ||||||| |||    
T  13911281 agagttgtcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaacttcatatgtgtttttagt 13911380  T
Q  160 ctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttga 257  Q
     |||| ||||||||||| || ||||||        || | ||||||||||| |||||||||||||||||| ||  |||||||||||||||||  |||| |    
T  13911381 gttttgtagtgagaaatcatgtaaatc--------aagacatcttatgaaggatcaaggatatgaagattaaat-taaatggttcttagaagaattttca 13911471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 19285139 - 19285319
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || ||||| |||||||||||||||| |||| |||||||||   ||||| | ||||||||| |||||| ||| |||||| ||  | ||||    
T  19285139 attttgtattattttcattcgagtcgttgtaattcaattttgtcctaaatccagcaactccttaggtgtttcgagtctctttcgtgagatatcgtgtaaa 19285238  T
Q  184 tcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || ||||| ||| |||||  ||| | |||| | ||||| ||||||||  || |||||||||| |||||| ||||||||||||    
T  19285239 tcagaaaaacaagatatcaaatgtaggatcga-gatatcaagattgataatcaatggttcttggaaggtatttgaagacaat 19285319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 26797308 - 26797221
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcg 186  Q
    ||||| |||||||| ||||||  |||||||||||||||| |||||||||||||| ||||||||||||||| |||| || || |||||||    
T  26797308 tcattcgagtcgttataattctgttttatcctaaatcatgcaacttcataggtg-tttgagtctttttagagagatatcatgtaaatcg 26797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 264
Target Start/End: Original strand, 25883166 - 25883324
Alignment:
Q  107 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 205  Q
    ||||||||||||| |||||||||| || || ||||| |||||||||||||||| |||| ||||||| ||| || || |||   ||| ||| | ||||| |    
T  25883166 tcgttgtaattcagttttatcctagattatgcaactacataggtgttttgagtgttttatagtgaggaatcatgtacatcatcaaatcaagacatcttgt 25883265  T
Q  206 gaa-gatcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     || ||||||||  |||||| ||||||||| || ||||||||||||||| |||||||||||    
T  25883266 taaggatcaagg--atgaagaattgaagatcaagggttcttagaaggttgttgaagacaat 25883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 2729673 - 2729613
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  2729673 gagtccttgtaattcatttttatcctaaaccatgcaacttcatatgtgttttgagtgtttt 2729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 19263855 - 19263809
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggttttt 255  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  19263855 gatcaaggatatgaagattgaagatcaatggttcatagaaggttttt 19263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 260
Target Start/End: Complemental strand, 25919519 - 25919369
Alignment:
Q  102 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 201  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||| |||||||        ||||||| ||| || |||||||  ||| ||| |||||    
T  25919519 ttgagtcatcgtaattcacttttatcctaaatcatgcaactccatagatgttttg--------tagtgaggaatcatgtaaatcgacaaaccaagatatc 25919428  T
Q  202 ttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
      ||||| ||||||||||||||||||||||||| || | || |||||| |||||||||||    
T  25919427 acatgaaggatcaaggatatgaagattgaagatcaacgatttttagaa-gtttttgaaga 25919369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 27415236 - 27415309
Alignment:
Q  112 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaat 184  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||| |||| |||| |||||| || |||||    
T  27415236 gtaattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgttttgtagtaagaaatcatgtaaat 27415309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 5632607 - 5632536
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    |||||| || || |||||||| ||||||||||||| ||||||| | |||||| ||||| |||||||||||||    
T  5632607 ttttgtgttgttttcatttgattcgttgtaattcacttttatcttgaatcatgcaactccataggtgttttg 5632536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 10341957 - 10342008
Alignment:
Q  213 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||||||    
T  10341957 aaggatagaaagattgaagatcagtggttcttagaaggtttttgaagacaat 10342008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 16970293 - 16970360
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 165  Q
    |||||| |||||||||||||||  |||||||||||||||  |||||||| ||||||| |||| |||||    
T  16970293 tcatttaagtcgttgtaattcacgtttatcctaaatcataaaacttcatgggtgtttagagtgttttt 16970360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 16970628 - 16970679
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||||||||||||| |||||||  || |||||||||||||||||||||||    
T  16970628 gatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaaga 16970679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 4780759 - 4780687
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    ||||||| || ||| |||| || |||||||||| | |||||||| ||||||||||||||||| | ||||||||    
T  4780759 ttgtattgttttcacttgaatcattgtaattcactcttatcctacatcattcaacttcatagatattttgagt 4780687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 10341856 - 10341907
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||||||||||| |||||| | ||||||| ||||| |||||||||||||    
T  10341856 agtcgttgtaattcacttttattcaaaatcatgcaactccataggtgttttg 10341907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 27374525 - 27374446
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||||||| || ||||| ||||| || |||| || |||||||||||||||| ||||||| |||||  ||||| ||||||    
T  27374525 ttttgtattgttttcattcgagtcattataatccagttttatcctaaatcatgcaacttcgtaggttatttgaatctttt 27374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 1475366 - 1475297
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaact 142  Q
    ||||||| ||||| ||||||| || ||| | |||||||||||||||| || ||||||| ||||| |||||    
T  1475366 gtttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaact 1475297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 12409501 - 12409558
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttc 144  Q
    ||||||| || ||| |||||||||||||||||||||||||| |  ||||| |||||||    
T  12409501 ttgtattattttcacttgagtcgttgtaattcatttttatcttggatcatgcaacttc 12409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 12573319 - 12573432
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| |||  |||||||| || ||| | ||| ||||||||||||||||||||||| ||||| || || | ||||| |||| ||| |||| |||||||    
T  12573319 gtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgtagtgag 12573418  T
Q  172 aaataatataaatc 185  Q
     ||| || ||||||    
T  12573419 gaatcatgtaaatc 12573432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 13549783 - 13549896
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| |||  |||||||| || ||| | ||| ||||||||||||||||||||||| ||||| || || | ||||| |||| ||| |||| |||||||    
T  13549783 gtttgaggaatgctttgtattgttttcactcgagacgttgtaattcatttttatcctagatcatgcagctccgtaggtttttttagtgttttgtagtgag 13549882  T
Q  172 aaataatataaatc 185  Q
     ||| || ||||||    
T  13549883 gaatcatgtaaatc 13549896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 23007150 - 23007065
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    |||||| ||||| ||||||| || ||  | ||||| || ||| ||| |||||||||||||||| ||||| ||||| ||||||||||    
T  23007150 tttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactccatagatgttttgagt 23007065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 4775763 - 4775719
Alignment:
Q  103 tgagtcgttgtaattcatttttatcctaaatcattcaacttcata 147  Q
    ||||||||||||||||| | |||||||| ||||| ||||||||||    
T  4775763 tgagtcgttgtaattcactcttatcctagatcatgcaacttcata 4775719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 21017937 - 21017997
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    |||||||||||||||| |||||||||| ||||| |||||  | | ||||||||||| ||||    
T  21017937 gagtcgttgtaattcagttttatcctagatcatgcaactctaaatgtgttttgagtgtttt 21017997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 25727961 - 25727802
Alignment:
Q  107 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 205  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| |||||  ||    
T  25727961 tcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacat 25727862  T
Q  206 gaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25727861 gaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaat 25727802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 264
Target Start/End: Complemental strand, 25736369 - 25736210
Alignment:
Q  107 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 205  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| |||||  ||    
T  25736369 tcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacat 25736270  T
Q  206 gaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25736269 gaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaat 25736210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 31313613 - 31313773
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 204  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || ||||| |||||| ||| | |||       
T  31313613 agtcgttgtaattcacttttatcctaaatcatgcaacttcataggtgttttgagtttttttagtaagaaatcatgtaaattggaaaaacaatacatcacg 31313712  T
Q  205 tgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| ||| ||| ||||||||| ||||||| |||| |||||| ||||||||||||||||||    
T  31313713 tgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaat 31313773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 26102097 - 26102278
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || ||||| |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||  |  |||    
T  26102097 attttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactccatgggtgttttgagtctttttagtgagatatcgtgcaaa 26102196  T
Q  184 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||  ||| ||| | |||   |||| ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  26102197 tcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaat 26102278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 106 - 264
Target Start/End: Complemental strand, 11770047 - 11769887
Alignment:
Q  106 gtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatcggaaaagcaaaatatctta 204  Q
    |||||||||||||| ||||||||||||||||  |||||||| ||||| |||||| ||||  |||||||||| || ||||||| |||| ||| | |||  |    
T  11770047 gtcgttgtaattcacttttatcctaaatcatgaaacttcatgggtgtgttgagtgttttgcagtgagaaatcatgtaaatcgaaaaatcaagacatcaca 11769948  T
Q  205 tgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  11769947 tgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 11769887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 27461266 - 27461074
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaa 173  Q
    |||||| || |||||||||| || |||||  ||| ||| ||||||| ||||||||||||| || |||||||||||||||||  |||||||||||| ||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaacttcataggtgtttgtagtctttttagtaagaa 27461167  T
Q  174 ataatataaatcggaaaag-caaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || || ||| ||||||||  ||| | |||  ||||| |||| |||||||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  27461166 atcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaat 27461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 85 - 264
Target Start/End: Complemental strand, 26854391 - 26854213
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || |||||  ||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||  ||||||| || ||||     
T  26854391 ttttgtattcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta--gagaaatcatgtaaac 26854294  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| ||| ||| | ||    |||| |||||| |||||||||||||||| | ||||||||||||||| | ||||||||||||    
T  26854293 cggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaat 26854213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 52271315 - 52271138
Alignment:
Q  88 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 187  Q
    |||| |||| |||||| ||||||||| ||||| |||  |||||||| || ||||| ||||| |||||||||||||||||||||||||| || ||||||||    
T  52271315 tgtacttttttcatttaagtcgttgtcattcactttattcctaaattatgcaactccatagatgttttgagtctttttagtgagaaattatgtaaatcgg 52271216  T
Q  188 aaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||| |||||   |   |||| |||| |||||||||||||||||| | |||||| |||||||||| ||||||||||||    
T  52271215 caaaacaaaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaat 52271138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 25730616 - 25730464
Alignment:
Q  114 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-at 211  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||| |||| ||| ||||||| || |||||||  ||| ||| |||||  |||||| ||    
T  25730616 aattcaattttatcctaaatcatgcaacttcacaggtgttttgagtgttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggat 25730517  T
Q  212 caaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| ||||||||| ||||| |||||||||| |||||||||||| ||||||    
T  25730516 caaggagatgaagatttaagatcaatggttcttggaaggtttttgacgacaat 25730464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 259
Target Start/End: Complemental strand, 15298968 - 15298768
Alignment:
Q  60 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    ||||||||| |  ||||||| ||  ||||||||| |  |||||||| || |||||||| | |||||||| ||||||| ||||||||||||||||||| ||    
T  15298968 agagttgtcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaagttttatccaaaatcatgcaacttcataggtgttttgtgt 15298869  T
Q  160 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    || |||||||| |||| || |||||||| ||| ||| | ||| | | || |||| |||||||||||||| ||||| ||||||||||| ||| | ||||||    
T  15298868 ctatttagtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaa 15298769  T
Q  259 g 259  Q
    |    
T  15298768 g 15298768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 30675513 - 30675701
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| | ||||||||||||| || |||| ||||| ||||| ||||| |||||||||||||||| |||| |||||||    
T  30675513 gtttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactccataggtgttttgagtgttttatagtgag 30675612  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||| || |||||||| ||   || | ||| | |||| ||||||| || ||||||||||| || ||||||||||||||||||||||||||    
T  30675613 aaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaaga 30675701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 252
Target Start/End: Original strand, 34381762 - 34381920
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt---tagtgagaaataatataaatcggaaaagca 194  Q
    ||||| |||||||||||||||| || ||| ||||||||  |||||||||||||||||||||| ||||   |||||| ||||||| |||||||  ||| ||    
T  34381762 tcattcgagtcgttgtaattcacttctattctaaatcacgcaacttcataggtgttttgagtattttgtatagtgaaaaataatgtaaatcgacaaatca 34381861  T
Q  195 aaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtt 252  Q
    ||| |||   || |||||||||||||||||| |||||||| ||||||| ||| ||||||    
T  34381862 aaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 15417059 - 15416866
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    |||||||||| ||||| |||| || |||||  | || || ||||||| ||||||| |||||||| |||||  ||||||||||||||||||||||  |  |    
T  15417059 gtttgagaaacattttttattgttttcattcaattcattttaattcacttttatcttaaatcatgcaactgtataggtgttttgagtctttttatagtca 15416960  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaa-ggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| || ||| |||| ||||||| | | |  ||||| |||||| ||||||||||| ||||||| ||||||||||| ||||||||| ||||||||    
T  15416959 aatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 249
Target Start/End: Original strand, 21548677 - 21548854
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||  |||| |||| || ||||| |||||||||||||||| ||||||||||||  || ||||| |||| |||||| |||||||| ||||| ||    
T  21548677 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcagttttatcctaaaaaatgcaactccataagtgtttggagtctttctagtgtga 21548776  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaag 249  Q
    ||| |  |||||||||||| ||| | |||   | ||| ||   ||||||||||||||||| |||||||||||||||||    
T  21548777 aatcaagtaaatcggaaaaacaagacatcacgtaaagaattgtggatatgaagattgaagctaaatggttcttagaag 21548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 255
Target Start/End: Original strand, 18795210 - 18795393
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || |||||||||  || ||||||||||  |||||||| | ||||||||||| |||| || |||||||||||||||||||| |||||||||||    
T  18795210 gtttgaggaacattttgtatcgttttcatttgagtaattgtaatttacttttatcctaagtcatacagcttcataggtgttttgagtcattttagtgaga 18795309  T
Q  173 aataatataaatcggaaaagcaaaatatcttatga-agatcaaggatatgaagattgaagataaatggttcttagaaggttttt 255  Q
    |||  | |||||| | ||| ||| | |||  ||||  |||||| |||||||| | ||||||| |||| ||||  ||||||||||    
T  18795310 aatcgtgtaaatcagcaaaacaagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggttttt 18795393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 264
Target Start/End: Complemental strand, 19257874 - 19257699
Alignment:
Q  88 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 187  Q
    |||||| || |||||  |||| |||||||||  |||||||||||||||| ||| | | |||||||||||||| |||||||||||||||  | ||||| ||    
T  19257874 tgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtatttttagtgagaaatcgtgtaaattgg 19257775  T
Q  188 aaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     | | ||| | |||  ||| |||||| ||||||||||||||||| || ||  ||||||||||||| ||||||||||||    
T  19257774 cataacaagacatcacatgaaagatcgaggatatgaagattgaacatcaa--gttcttagaaggtctttgaagacaat 19257699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 18301057 - 18300896
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta-gtgagaaataatataaatcggaaaagcaaaatatctt 203  Q
    ||||||||||||| | |||||||  ||||||| |||||||||||||||||||||| |||| | ||||  ||| || ||||| |  ||| ||| | |||      
T  18301057 agtcgttgtaattgacttttatcgaaaatcatgcaacttcataggtgttttgagtgttttaaagtgatgaatcatgtaaatagacaaatcaagacatcac 18300958  T
Q  204 atgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||||| |||||||||||||||||| || |  ||||||||||||||||||||||||||||||    
T  18300957 gtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaat 18300896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 25126509 - 25126620
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||| ||||||||| || | ||||||||||| |||||||| ||||||||||||||||   | |  ||| |||||||||||||||||| |||||    
T  25126509 gtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagttttatcctaaatcatgtgattatatatgtgttttgagtctttttaatgaga 25126608  T
Q  173 aataatataaat 184  Q
    ||| || |||||    
T  25126609 aatcatgtaaat 25126620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 25494536 - 25494382
Alignment:
Q  102 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 201  Q
    ||||||| |||||||| | |||||||||||||||| ||||| |||||||||||||        ||||||||||| || |||||||  ||| ||| | |||    
T  25494536 ttgagtccttgtaatttacttttatcctaaatcatgcaactacataggtgttttg--------tagtgagaaatcatgtaaatcgacaaatcaagacatc 25494445  T
Q  202 ttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
      || ||| | |||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  25494444 acattaaggagcaag-atatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 25494382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 264
Target Start/End: Original strand, 30781794 - 30781981
Alignment:
Q  78 agaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaata 176  Q
    |||||||| ||||||| || ||| | ||| | |||||||||| |||||||| | ||||| ||||| |||||||||||||||| |||| ||||||| |||     
T  30781794 agaaatatattgtattgttttcaatcgagacattgtaattcagttttatccaagatcatacaactccataggtgttttgagtgttttgtagtgaggaatc 30781893  T
Q  177 atataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || ||||||   ||| ||| | ||| | |||| ||||||||  |||||| ||||||||| || |||||||| |||||| |||||||||||    
T  30781894 atgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaaggttgttgaagacaat 30781981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 263
Target Start/End: Original strand, 26657505 - 26657696
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| |||||  |||||| || ||| | || ||||||||||||| |||||||||| ||||  ||||| |||||||||||||||| |||| ||||||     
T  26657505 gtttgaggaatataatgtattgttttcactcgattcgttgtaattcacttttatcctagatcacgcaactccataggtgttttgagtgttttgtagtgaa 26657604  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 263  Q
    |||| || |||||||  ||| ||| | ||    |||| |||||||| |||||| || |||| | ||| ||||||| |||||||||||||||||    
T  26657605 aaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaagacaa 26657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 12810351 - 12810434
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||| || || ||||||| || |||||  |||||||||||||||||||||||||| ||||| ||| ||| |||||||||||    
T  12810351 gtttgaggaacatattgtattgttttcattcaagtcgttgtaattcatttttatcctagatcatgcaatttcgtaggtgttttg 12810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 18391111 - 18391222
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || ||||| |||| || |||||||||||||||||||| | |||||||||| ||||| ||| | |||||| |||| |||| |||||||  |||    
T  18391111 gtttgagtaacattttatattattttcatttgagtcgttgtaattaacttttatcctagatcatgcaattccataggcgtttagagtatttttaggaaga 18391210  T
Q  173 aataatataaat 184  Q
    ||| || |||||    
T  18391211 aatcatgtaaat 18391222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 25373862 - 25373967
Alignment:
Q  160 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    |||||||| |||||||||| |||||||| |||  |||| |||   ||||| ||| |||||||||||||| ||||  |||||||||||||||||| || ||    
T  25373862 ctttttagagagaaataatgtaaatcggcaaaagaaaacatcaattgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaa 25373961  T
Q  259 gacaat 264  Q
    ||||||    
T  25373962 gacaat 25373967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 13807827 - 13807747
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    |||||||||| || |||||  |||||||||||||||  || ||||  |||||| ||||||||||| |||||||||||||||    
T  13807827 attttgtattgttttcattcaagtcgttgtaattcacgttcatccctaatcatgcaacttcatagttgttttgagtctttt 13807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 264
Target Start/End: Original strand, 23223475 - 23223635
Alignment:
Q  107 tcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttat 205  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| | | |||| ||||||||||| || ||||||   ||  ||| | |||  ||    
T  23223475 tcgttgtaatttacttttatcctaaatcatgcaactccaaaggtgtttttaatgttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcat 23223574  T
Q  206 gaaga-tcaaggatatgaagattgaagataaatggttcttagaagg-tttttgaagacaat 264  Q
    ||||| |||||||||||||||||||| |  |||  ||| ||||||| ||||||||||||||    
T  23223575 gaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttgaagacaat 23223635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 25965460 - 25965414
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattca 119  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  25965460 gtttgagcaatattttgtattcttctcattcgagtcgttgtaattca 25965414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 50047211 - 50047301
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||||||| || ||||||| || ||| | ||||| | |||||||| |||||||||||||||| ||||| ||||  |||||||||| ||||    
T  50047211 tttgagaaacatattgtattgttttcactcgagtcatggtaattcacttttatcctaaatcatacaactccatatatgttttgagtgtttt 50047301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 25266417 - 25266329
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaa 174  Q
    ||||||| || ||| | ||||| |||||||||||||||||| |  |||||  ||||||||| ||||||||||| |||| ||||||||||    
T  25266417 ttgtattgttttcactcgagtcattgtaattcatttttatcttggatcatggaacttcatatgtgttttgagtgttttgtagtgagaaa 25266329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 31319552 - 31319504
Alignment:
Q  216 gatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||| | ||||||| ||||||||||||||| ||||||||||||||    
T  31319552 gatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 9328334 - 9328388
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||| ||||||||||||||||  | ||| ||||||||||||||||||||||||||    
T  9328334 gatcagggatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaat 9328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 23519716 - 23519662
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||| ||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  23519716 gatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaat 23519662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 50047341 - 50047396
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||| |||||| ||||||||| |||||| |||| |||||| |||||||||||    
T  50047341 gatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaat 50047396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 8247743 - 8247630
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || || |||| || ||| ||||||| ||||||||   ||||| |||| ||||| ||||| |||||||||||||||| |||| |||||||    
T  8247743 gtttgaggaacatattttattattttcacttgagtcattgtaattttgttttaccctagatcatgcaactccataggtgttttgagtgttttgtagtgag 8247644  T
Q  172 aaataatataaatc 185  Q
     ||| || ||||||    
T  8247643 gaatcatgtaaatc 8247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 1174000 - 1174064
Alignment:
Q  138 caacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||||||||||||| |||||||||||||| | | |||| || ||  |||| ||||||||||||||    
T  1174000 caacttcataggtgctttgagtctttttattaataaatcatgtacttcggcaaagcaaaatatct 1174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 26499900 - 26499740
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 204  Q
    ||||||||||||||  ||||||||||||||||  || |||||||||||| ||||| ||||||||||||||| ||  ||||||| ||| ||| ||| |       
T  26499900 agtcgttgtaattcgattttatcctaaatcatgtaatttcataggtgttatgagtgtttttagtgagaaatcatgcaaatcggcaaaacaagataccacg 26499801  T
Q  205 tg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    || |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26499800 tgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaat 26499740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 61 - 264
Target Start/End: Complemental strand, 9943247 - 9943043
Alignment:
Q  61 gagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtc 160  Q
    |||||||||| |||||||| ||||||||||||  || |||||  ||  ||||||||||| |||||||||||||||| ||||| |||||||||||| |||     
T  9943247 gagttgtccatcgtttgaggaatattttgtatagttatcattcaagctgttgtaattcacttttatcctaaatcatgcaactccataggtgtttttagta 9943148  T
Q  161 tttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaag 259  Q
    |||||| |||||||| || |||||||||||| ||| | ||   || || || |||||||||||||| |||| || ||||| ||||| ||||||||| |||    
T  9943147 tttttattgagaaatcatgtaaatcggaaaaacaagacattaaatcaaggaccaaggatatgaagaatgaaaatcaatggctcttataaggtttttaaag 9943048  T
Q  260 acaat 264  Q
    |||||    
T  9943047 acaat 9943043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 260
Target Start/End: Original strand, 16439516 - 16439675
Alignment:
Q  102 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 201  Q
    |||||||||| ||||| | ||||||||||||| || |||||||| | ||||||||||||||||||||||||||| || |||||| ||||| ||| | |||    
T  16439516 ttgagtcgttataattaacttttatcctaaataatgcaacttcacatgtgttttgagtctttttagtgagaaatcatgtaaatcagaaaaacaagacatc 16439615  T
Q  202 ttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
      ||| ||||||| ||||||||||| ||||||| |||||||||||||| | |||||||||    
T  16439616 agatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaaga 16439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 12972435 - 12972291
Alignment:
Q  108 cgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatg- 206  Q
    |||||||||||| || ||||||||||||| |||||||||| ||||||||||||||||||| ||||||| || |||||| ||||| ||| | ||    ||     
T  12972435 cgttgtaattcagttgtatcctaaatcatgcaacttcatacgtgttttgagtctttttagggagaaatcatgtaaatcagaaaaccaagacataacgtga 12972336  T
Q  207 aagatcaaggatatgaagattgaagataaatggttcttagaaggt 251  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||    
T  12972335 aagatcgatgatatgaagattgaagatcaatggttctttgaaggt 12972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 264
Target Start/End: Complemental strand, 9396652 - 9396500
Alignment:
Q  112 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-ga 210  Q
    ||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| || |||||||| ||| ||| | |||   |||| ||    
T  9396652 gtaattcatctttattctaaatcatgcaacttcatatgtgttttgagtctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaagga 9396554  T
Q  211 tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||| | ||||| ||||||| || | |||||||||  ||||||||||||||    
T  9396553 tcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaat 9396500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 24617541 - 24617695
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    |||||| |||||||| ||||| || | ||| ||||||| |||||||| ||||||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  24617541 gtttgacaaatatttagtattgtt-taattcgagtcgtcgtaattcagttttatcctaaatcatgtaacttcatgagtgttttgagtctttttagtgaga 24617639  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagatt 227  Q
    ||| || |||||| | ||| ||| | ||| | |||| | |||||||||||||||||    
T  24617640 aattatgtaaatcagcaaaacaagacatcatgtgaagggtcaaggatatgaagatt 24617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 33638501 - 33638402
Alignment:
Q  162 ttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||||||||||| || |||||||| ||| ||| |||||   ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  33638501 ttttagtgagaaatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaaga 33638402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16527950 - 16528002
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  16527950 gagtcgttgtaattcatttttatcctagatcatgcaacttcataggtgttttg 16528002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 14924478 - 14924311
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||| |||||||||||  ||| |||||| ||||||||| ||| |  ||||| |||||||||||||| |||||||||| || |||| | |  || ||| |    
T  14924478 tcattcgagtcgttgtacctcacttttattctaaatcatgcaattatataggggttttgagtcttttaagtgagaaatcatgtaaaccagctaaacaaga 14924379  T
Q  198 tatcttatgaagatcaag-gatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     |||  ||||||| | || |||||||| ||||||||| |||||||| | ||| |||||||||||||||    
T  14924378 catcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaat 14924311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 20495853 - 20495790
Alignment:
Q  100 atttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt 163  Q
    |||||||||||||||||||| ||||||| ||||| || |||||||||| |||||||||||||||    
T  20495853 atttgagtcgttgtaattcaattttatcttaaattatgcaacttcataagtgttttgagtcttt 20495790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 30355483 - 30355538
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30355483 gatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaat 30355538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 26512938 - 26512672
Alignment:
Q  1 attttagactatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttc 97  Q
    |||| |||||||| |||| |||||||| |||||||  |||| |||||| | |||||  |||||   ||||| |  ||||| | || |||||||||| ||     
T  26512938 atttcagactatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttt 26512839  T
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||| || ||||||||||||| ||||| |||| ||||| ||||   |||| |||||||||||||  ||||||||||| || |||| ||   || ||| |    
T  26512838 tcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttcctagtgagaaatcatgtaaa-cgatgaaacaaga 26512740  T
Q  198 tatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     | | | ||||| |||||||||||||||  ||||||| ||||||||||| ||||| | |||| |||||    
T  26512739 aaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaat 26512672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 26518054 - 26517788
Alignment:
Q  1 attttagactatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttc 97  Q
    |||| |||||||| |||| |||||||| |||||||  |||| |||||| | |||||  |||||   ||||| |  ||||| | || |||||||||| ||     
T  26518054 atttcagactatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttt 26517955  T
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||| || ||||||||||||| ||||| |||| ||||| ||||   |||| |||||||||||||  ||||||||||| || |||| ||   || ||| |    
T  26517954 tcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttgagtcttcctagtgagaaatcatgtaaa-cgatgaaacaaga 26517856  T
Q  198 tatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     | | | ||||| |||||||||||||||  ||||||| ||||||||||| ||||| | |||| |||||    
T  26517855 aaacatgtgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaat 26517788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 32930527 - 32930447
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||||||| ||||||| ||||||||| || ||| ||| || |||| |||||||||||||||||||||||||| || |||||    
T  32930527 gagtcgttttaattcacttttatccttaaacatgcaatttgatagatgttttgagtctttttagtgagaaatcatgtaaat 32930447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 1755636 - 1755555
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 165  Q
    |||||||||| || |||||||| ||||||||||||| || |||||  ||||||  |||| |||| |||||||||||||||||    
T  1755636 attttgtattgttttcatttgattcgttgtaattcacttgtatccctaatcatgtaactacatacgtgttttgagtcttttt 1755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 22559253 - 22559181
Alignment:
Q  118 catttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaa 191  Q
    ||||||| ||| ||||||| ||||||||||||||||||| ||| |||||||||||||| || ||||||| ||||    
T  22559253 catttttttcccaaatcatgcaacttcataggtgttttgggtc-ttttagtgagaaatcatgtaaatcgaaaaa 22559181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 33638259 - 33638303
Alignment:
Q  216 gatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaaga 33638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 24618053 - 24618104
Alignment:
Q  213 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| ||||||||    
T  24618053 aaggatatgaagattgaagatcaatgattcttagaagatctttaaagacaat 24618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 30355386 - 30355437
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||| ||||||| ||||||| |||||||| |||||| ||||||||||||    
T  30355386 agtcgttttaattcacttttatcataaatcatgcaactttataggtgttttg 30355437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 14768354 - 14768240
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| ||| |||||||||  | ||||| ||||  ||||||||||  ||||| ||||| ||| ||| ||||||  ||||||||||||||| ||  |||    
T  14768354 gtttgaggaattttttgtattggtttcattcgagttattgtaattcacatttattctaaaacatgcaatttcataaatgttttgagtcttttcagataga 14768255  T
Q  173 aataatataaatcgg 187  Q
    ||| || ||||||||    
T  14768254 aatcatgtaaatcgg 14768240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 15998540 - 15998652
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||  |||| |||||| |||| | |||| || || ||||| |||||||||||||||||||||| |||| |||||||    
T  15998540 gtttgaggaaaatattgtattcttttcccttgattcgttgaaattaagttttctcatatatcatgcaacttcataggtgttttgagtgttttgtagtgag 15998639  T
Q  172 aaataatataaat 184  Q
     ||| || |||||    
T  15998640 gaatcatgtaaat 15998652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 10576407 - 10576669
Alignment:
Q  1 attttagactatgctttttgttattttctttgcataagaagacaaatacgtggtcacatagag---ttgtccaacgtttgagaaatattttgtatttttc 97  Q
    ||||||||||||| |||| |||||||||||| |||  ||||  ||||| | | |||  |||||   |||||||  ||||||  || |||||||||| ||     
T  10576407 attttagactatgtttttagttattttctttccatttgaaggaaaataagagatcatttagagaagttgtccatggtttgaagaacattttgtattgttt 10576506  T
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaa 197  Q
    ||||| ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| ||||| ||||||||||| || |||||||||||| ||| |    
T  10576507 tcattcgagtcattgtaattcacttttattctaaattatacaacttcataggtgttttgattctttctagtgagaaattatgtaaatcggaaaaacaaga 10576606  T
Q  198 tatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaag 259  Q
     ||| | |||| |||| |||||||||||| | ||||   ||| || |||||||||||||||||    
T  10576607 catcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaag 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 26159772 - 26159971
Alignment:
Q  60 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt 159  Q
    ||||||||| |  |||| ||||| |||||||||| || ||||| |||||||||||||| | |||| |||||||| || |||||||||| |||||||||||    
T  26159772 agagttgtcaatagtttaagaaacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgttttgagt 26159871  T
Q  160 ctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    ||||||||||| |||| || || ||| | ||| ||| | ||| | |||| |||  |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  26159872 ctttttagtgaaaaatcatgtagatcagcaaaacaagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaa 26159971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 33519100 - 33519251
Alignment:
Q  114 aattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atc 212  Q
    |||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||| || | |||||| ||| ||||| ||||  ||||| ||     
T  33519100 aattcagttttatcttaaatcatgcaacttcgtaggtgttttgagtctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaatt 33519199  T
Q  213 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||||||||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  33519200 gaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaat 33519251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 121 - 264
Target Start/End: Complemental strand, 31859938 - 31859794
Alignment:
Q  121 ttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggata 219  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| | ||| ||| | | |   |||| |||| ||||||    
T  31859938 ttttatcctaaatcatgcaactgcataggtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggata 31859839  T
Q  220 tgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  31859838 tgaatattgaagatcaatggttcttagaaggtatttgaagacaat 31859794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 9288253 - 9288428
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcg 186  Q
    ||||||| || ||||||||||| || ||||||||||||||| ||||||||  | || |||| || |||| ||||||||||||||||||| || |||||||    
T  9288253 ttgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgtttttttagtctttttagtgagaaatcatgtaaatcg 9288352  T
Q  187 gaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagac 261  Q
    | ||| ||| | |||   |||| ||||||||||||||||||||||||  |||||||||||| ||||| || |||||    
T  9288353 gcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttcttagcaggttgttaaagac 9288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 29437539 - 29437677
Alignment:
Q  112 gtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-ga 210  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || |||||||| ||  ||| | |||   |||| ||    
T  29437539 gtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttttaatgagaaatcatgtaaatcggcaagacaagacatcacgtgaagga 29437638  T
Q  211 tcaaggatatgaagattgaagataaatggttcttagaag 249  Q
    || |||||||||||||||||| | |||||||||||||||    
T  29437639 tcgaggatatgaagattgaagttcaatggttcttagaag 29437677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 265
Target Start/End: Complemental strand, 17339897 - 17339706
Alignment:
Q  75 ttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaa 174  Q
    ||||| || ||||||||| ||| |||||  |||| |||||||||| |||||||||||||||| ||| ||||||||||||||||  ||||||||||||| |    
T  17339897 ttgaggaacattttgtatctttttcattctagtctttgtaattcaattttatcctaaatcatgcaatttcataggtgttttgaagctttttagtgagaga 17339798  T
Q  175 taatataaatcggaaaagcaaaatatcttatgaa-gatcaag-gatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 265  Q
    |  | | |||||  ||||||| |||||  ||||| ||||||| |||||| ||| ||||||| | || |||||| ||| |||||||||||||||    
T  17339797 tcgtgt-aatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaatt 17339706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 21167769 - 21167876
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || ||||| |||| ||||||||| | ||||||||||||  ||  |||||||||||||||||||| |||||||||||||||| || ||||    
T  21167769 attttgtattgttttcattcgagttgttgtaatttacttttatcctaaaatatgtaacttcataggtgttttgagactttttagtgagaaatcatgtaaa 21167868  T
Q  184 tcggaaaa 191  Q
    ||||||||    
T  21167869 tcggaaaa 21167876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 265
Target Start/End: Original strand, 15192268 - 15192425
Alignment:
Q  109 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatga 207  Q
    ||||||||||| |||||||||| ||| | || || |||||||||||||||| |||| ||||||||||| || |||||||  ||| ||| | |||   |||    
T  15192268 gttgtaattcacttttatcctagatcgtgcagctccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtga 15192367  T
Q  208 ag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaatt 265  Q
    || |||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||    
T  15192368 aggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaatt 15192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 23353664 - 23353839
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    ||||||||| || ||||| |||||||||||||||| ||||||  |||||| | ||  |||||  ||||||||||||||||||||||||||| || |||||    
T  23353664 ttttgtattgttttcattcgagtcgttgtaattcaattttata-taaatcgtgcacattcatgagtgttttgagtctttttagtgagaaatcatgtaaat 23353762  T
Q  185 cggaaaagcaaaatatcttatgaagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| ||| ||| | |||  ||||||  |||||||||||||||| ||||| ||| |   ||||||||| ||| ||||||||    
T  23353763 cggcaaaacaagacatcacatgaaggacaaggatatgaagattaaagatcaatag---ttagaaggtcttttaagacaat 23353839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 264
Target Start/End: Complemental strand, 25315316 - 25315125
Alignment:
Q  74 tttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagt-ctttttagtgaga 172  Q
    |||||| || || ||||||| || ||| |||||||||||||||| | |||||||||| ||||| ||||| |||| | |||||||||  ||| |||||||     
T  25315316 tttgaggaacatattgtattgttttcacttgagtcgttgtaattaagttttatcctagatcatgcaactccatatgggttttgagtaatttgtagtgagg 25315217  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| || |||||||  ||| ||| | |||  ||||| ||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||    
T  25315216 aatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaagacaat 25315125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 5676268 - 5676421
Alignment:
Q  113 taattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatcggaaaagcaaaatatcttatgaag-a 210  Q
    |||||||||||||||||||||  | ||||| |||||||||||||||| ||||| |||||  ||| || ||||| |  ||| ||| | |||  |||||| |    
T  5676268 taattcatttttatcctaaattgtgcaactccataggtgttttgagtattttttagtgatgaatcatgtaaattgataaatcaagacatcacatgaagga 5676367  T
Q  211 tcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||||| ||| ||||| | ||||| |||||||||||||||||||||||||    
T  5676368 tcaaggatattaagtttgaatacaaatgattcttagaaggtttttgaagacaat 5676421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 258
Target Start/End: Complemental strand, 47024842 - 47024665
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    |||||| |||||| ||||||| || ||| | ||| |||| ||||||| |||||||||| ||||| ||||||||  |||||||||        ||||||||    
T  47024842 gtttgaaaaatatattgtattgttttcactcgagccgttctaattcacttttatcctagatcatgcaacttcaatggtgttttg--------tagtgaga 47024751  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    ||| || ||||||| |||| ||| | |||  |||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  47024750 aatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 13064511 - 13064648
Alignment:
Q  129 taaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagatt 227  Q
    |||||||| ||| || |||||||||||||||| ||||||| |||||| || ||||| || ||| ||| | |||   ||||| |||||||||| || ||||    
T  13064511 taaatcatgcaattttataggtgttttgagtcattttagtaagaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgatt 13064610  T
Q  228 gaagataaatggttcttagaaggtttttgaagacaatt 265  Q
    |||| | ||||||||||||| ||| |||||||||||||    
T  13064611 gaagttcaatggttcttagagggtatttgaagacaatt 13064648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 264
Target Start/End: Original strand, 17187252 - 17187394
Alignment:
Q  121 ttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggata 219  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||| |||| || |||||||  |||  || | |||   |||| |||  ||||||    
T  17187252 ttttatcctaaatcatgcaacttcataggtg--ttgagtctttttagtgataaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggata 17187349  T
Q  220 tgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||||||| | | ||||||||||||| | ||||||||||||    
T  17187350 tgaagattgaagttcagtggttcttagaagttatttgaagacaat 17187394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 264
Target Start/End: Original strand, 19601863 - 19602019
Alignment:
Q  109 gttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatg- 206  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| |||| ||  |||| ||||||||||| || ||||||   ||| ||| | |||   ||     
T  19601863 gttgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtga 19601962  T
Q  207 aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  19601963 aagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaagacaat 19602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 13275830 - 13275635
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    |||||||||| || ||||||| || ||||| |||||||| ||||||| ||| |||| ||||||| |||||   ||||||||||||||||||||| ||  |    
T  13275830 gtttgagaaacatgttgtattgttttcattcgagtcgttataattcactttcatcccaaatcatacaactctgtaggtgttttgagtctttttattgcta 13275731  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaa-ggatatgaagat--tgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| || ||| |||| ||||||| | | |  | ||| ||| || ||||||||| ||  ||||||| |||||||||| |||| ||||||||||||||    
T  13275730 aatcatgtaattcggcaaagcaatacaccacacgaaggattaagggatatgaatataatgaagatcaatggttctttgaagttttttgaagacaat 13275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 24925821 - 24925909
Alignment:
Q  60 agagttgtccaacgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 148  Q
    ||||||||| | |||||||| || |||||||||| || |||||||||||| ||||||||| ||||||| ||||||||  ||||||||||    
T  24925821 agagttgtcaatcgtttgagtaacattttgtattgttttcatttgagtcgctgtaattcacttttatcataaatcatgtaacttcatag 24925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 260
Target Start/End: Original strand, 46647233 - 46647412
Alignment:
Q  81 aatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaataata 179  Q
    ||||||||||||| || |||||  ||||| ||||||||| |||||||||||||||| ||||| |||| |||  ||||| | ||||||  ||||||| |||    
T  46647233 aatattttgtattgttttcattctagtcggtgtaattcacttttatcctaaatcatgcaactccataagtg--ttgagttatttttatcgagaaatcata 46647330  T
Q  180 taaatcggaaaagcaaaatatcttatga-agatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||| | ||| ||| | |||   |||  |||||| |||||||| | ||||||| ||||||||||| ||||||||| ||||    
T  46647331 taaatcagcaaaacaagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaaga 46647412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 34864342 - 34864189
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaa 208  Q
    |||||||||| ||||||||||||| ||  |||| |||  ||||||||||| |||| ||||||||||| || |||||||  ||| ||| | |||   ||||    
T  34864342 ttgtaattcacttttatcctaaattatgaaactccat--gtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaa 34864245  T
Q  209 g-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    | ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||    
T  34864244 ggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgtagacaat 34864189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 22119706 - 22119777
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    ||||| |||||||| | ||||| || ||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22119706 gagtcattgtaatttacttttacccaaaatcatgcaactacataggtattttgagtctttttagtgagaaat 22119777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 27302807 - 27302996
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || |||||||||| || ||| | ||||| |||||||||| || ||| ||| ||||| ||||||||| |||||||| ||| |||| ||||||     
T  27302807 gtttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaacttcat-ggtgtttttagtattttgtagtgat 27302905  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagaca 262  Q
     ||| || |||||||  |||  || | |||   || ||||||||||||||||| |||||| || || |||||||||||||||||||||||||    
T  27302906 gaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttgaagaca 27302996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 17026751 - 17026590
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatct 202  Q
    |||| ||||||||||| |||||||||| ||||| ||||| |||||||||||||||| |||| |||| | |||| || |||||||  |||  || | |||     
T  17026751 gagttgttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatca 17026652  T
Q  203 tatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||||| ||||||| ||||||  ||| ||| | ||||||||||| || |||||||||||||||    
T  17026651 catgaaggatcaagtatatgagaatttaag-ttaatggttcttaaaaagtttttgaagacaat 17026590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 10320301 - 10320202
Alignment:
Q  77 gagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgag-tctttttagtgagaaat 175  Q
    |||||| || ||||||| || ||| | |||||||||||||||| |||||||||| | ||| ||||| |||||||||||| || | ||| |||||||||||    
T  10320301 gagaaacatattgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgttttaagctttttgtagtgagaaat 10320202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 21077262 - 21077373
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||||||  ||||||||| || | ||| ||||||||||| |||| |||||||  |||||||  || | ||||||||||||  ||||||||||||| |    
T  21077262 gtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaattttatcacaaatcatcaaattccataggtgtttttggtctttttagtgaaa 21077361  T
Q  173 aataatataaat 184  Q
    ||| || |||||    
T  21077362 aatcatgtaaat 21077373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 22119791 - 22119842
Alignment:
Q  213 aaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||    
T  22119791 aaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaat 22119842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 13206697 - 13206647
Alignment:
Q  137 tcaacttcataggtgttttgagtctttttagtgagaaataatataaatcgg 187  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||||||||    
T  13206697 tcaatttcataggtgttttgagtcattttagtgagaaatcatgtaaatcgg 13206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 4732790 - 4732891
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    ||||| |||| || |||||||||||||||||||| |  ||||||||||| ||| |||||||| | |  |||| ||||||||||  ||||||| || ||||    
T  4732790 attttatattgttttcatttgagtcgttgtaatttaaatttatcctaaaccatacaacttcacaagcttttttagtctttttaacgagaaatcatgtaaa 4732889  T
Q  184 tc 185  Q
    ||    
T  4732890 tc 4732891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 5906703 - 5906660
Alignment:
Q  217 atatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||    
T  5906703 atattaagatttaagattaatggttcttagaaggtttttgaaga 5906660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 7024167 - 7024116
Alignment:
Q  209 gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||||| |||||||||||||||||  ||||||||||||||| || |||||||    
T  7024167 gatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaaga 7024116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 20044218 - 20044309
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    ||||| |||| || ||||| ||||| |||||||||| |||  |||| |||||| ||||| |||| || ||||||||||||||| ||| ||||    
T  20044218 attttatattgttttcattcgagtcattgtaattcaatttcttccttaatcatgcaactccatatgtattttgagtctttttattgaaaaat 20044309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 12243740 - 12243698
Alignment:
Q  145 ataggtgttttgagtctttttagtgagaaataatataaatcgg 187  Q
    |||||||||||||||| |||||||||||||| || ||||||||    
T  12243740 ataggtgttttgagtcattttagtgagaaatcatgtaaatcgg 12243698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 18444304 - 18444370
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||| ||| || ||||||||| |||||||||||||||  ||||| ||||||| |||| ||||||||    
T  18444304 tcattcgagccgctgtaattcagttttatcctaaatcacgcaactccataggtattttaagtctttt 18444370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 30624953 - 30624997
Alignment:
Q  131 aatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    |||||| ||| ||||||||||||||||||||||||| ||| ||||    
T  30624953 aatcatgcaatttcataggtgttttgagtctttttattgaaaaat 30624997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 17152182 - 17152371
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgag 171  Q
    ||||||| ||||||||||||| || ||||| |||||||||||||| | ||||||| ||| |||| |||||   || ||||||||||| ||||| ||| ||    
T  17152182 gtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactctgtaagtgttttgagttttttttagtaag 17152281  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaaga 260  Q
    |||| || |||||||| ||| ||| | ||| | ||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  17152282 aaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaaga 17152371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 21849158 - 21848967
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    ||||||| || |||||||||| || || |||||||| |||||||||| ||||||| |||||||| ||||| ||||||  |||||||||||||||||||||    
T  21849158 gtttgaggaacattttgtattgttttc-tttgagtcattgtaattcagttttatcataaatcatgcaactccataggatttttgagtctttttagtgaga 21849060  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| |||||||||| | ||| | |||  ||||| |||||||||||  || | |||| || ||||||||||| |||||||| ||| |||||    
T  21849059 aataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaat 21848967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 108 - 264
Target Start/End: Original strand, 31262063 - 31262218
Alignment:
Q  108 cgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatga 207  Q
    |||||||||||| |||||||| ||| ||| |||||||| ||||||||| ||||||||||||||||| | || ||||| || ||| ||| | | |  ||||    
T  31262063 cgttgtaattcagttttatcc-aaaccatgcaacttcacaggtgttttaagtctttttagtgagaattcatctaaattggcaaaacaagacaccacatga 31262161  T
Q  208 agatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  31262162 agatcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaat 31262218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 19541078 - 19541245
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||||||||| | ||| | ||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| || |||||    
T  19541078 ttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactccataggtgttttgagtctttctagtgagaaatcatgtaaat 19541177  T
Q  185 cggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggt 251  Q
    ||| |||  || | |||   |||| |||| |||||||||||||||||||  ||||||||||| |||||    
T  19541178 cggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataaggt 19541245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 264
Target Start/End: Complemental strand, 18236388 - 18236196
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgaga 172  Q
    |||||||||| | ||| |||| || ||||| |||| ||| ||||||| ||||||| |||||||| ||||| |||| || |||||||||||||||||||||    
T  18236388 gtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactccataagtattttgagtctttttagtgaga 18236289  T
Q  173 aataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||| || ||| |||| ||| ||| | |||  ||||| |||||   |||||||||||||||   |||||||||||||||||| |||||||||||    
T  18236288 aatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaat 18236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 24047422 - 24047604
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || ||||| ||||| |||||||||| ||||||||||||| || ||||| ||||||  ||||| ||| ||||||||||||||  || |||    
T  24047422 attttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactccataggcattttgggtcattttagtgagaaatcctacaaa 24047521  T
Q  184 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttct-tagaaggtttttgaagacaat 264  Q
    |||| ||| ||| | |||  ||||| ||||||||||||||||| ||||||| |||||||||  | ||||||| ||||||||||    
T  24047522 tcggcaaaacaagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaat 24047604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 30998800 - 30998992
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| ||||||||||||| |||| |||||||||| ||||| ||||| |||||||||||||||| |||| ||||||     
T  30998800 gtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatacaactccataggtgttttgagtgttttgtagtgaa 30998899  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     | | || |||||||  ||| ||| |||||   |||| ||||||||||||| | ||||||||| || ||||||||||||||| |||||||||||    
T  30998900 gagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaagacaat 30998992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 105 - 264
Target Start/End: Original strand, 39730508 - 39730668
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatctta 204  Q
    ||||||||||||||| |||||||||||||||| |||||    ||||||||||||| ||||||||||||||| ||||||||| | ||| ||| | |||  |    
T  39730508 agtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttttagtgagaaatcatataaatcagcaaaacaagacatcaca 39730607  T
Q  205 tgaa-gatcaa-ggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| |||||| ||||||||||| ||||||  |||  ||||||||||  |||||||||||||    
T  39730608 tgaaggatcaagggatatgaaga-tgaagactaatatttcttagaagaattttgaagacaat 39730668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 21505211 - 21505032
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatc 185  Q
    ||||||| || ||| | ||||| || ||||| | |||||||||||||||| ||||||| ||| |||||||||| |||| ||||||| ||| || ||||||    
T  21505211 ttgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaacttcttagatgttttgagtgttttgtagtgaggaatcatgtaaatc 21505112  T
Q  186 ggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |  |||  || | |||  ||||| |||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||    
T  21505111 gataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaagacaat 21505032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 263
Target Start/End: Complemental strand, 15454605 - 15454433
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || || |||||||||||||| ||||||||||||||||||||| ||       ||||||||||||| |||||||||||||||  | ||||    
T  15454605 attttgtattgttttcttttgagtcgttgta-ttcatttttatcctaaatcatgca-------aggtgttttgagtttttttagtgagaaatcgtgtaaa 15454514  T
Q  184 tcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaa 263  Q
    |  | ||| ||| | |||  ||||| ||||||||||||||||| | ||||||||||||||||| ||| ||| | |||||||    
T  15454513 ttagcaaaacaagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 264
Target Start/End: Complemental strand, 27417301 - 27417156
Alignment:
Q  121 ttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggat 218  Q
    |||||||||||||||| ||||| |||||||||||| ||| |||| ||||||||||| || |||||||  ||| ||| | |||  |||||| ||||| |||    
T  27417301 ttttatcctaaatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgat 27417202  T
Q  219 atgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||  |||||||  ||||||||| |||||||||||||| |||||    
T  27417201 atgaatgttgaagaccaatggttctaagaaggtttttgaaaacaat 27417156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 14922044 - 14921932
Alignment:
Q  153 tttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaaga-tcaaggatatgaagattgaagataaatggttcttagaaggt 251  Q
    ||||||||||||| ||||||||| || |||||||||||| ||| | ||| | |||||| || |||||||||||||||||| | |||||||||||||||||    
T  14922044 tttgagtctttttcgtgagaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggt 14921945  T
Q  252 ttttgaagacaat 264  Q
     | || |||||||    
T  14921944 atatgtagacaat 14921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 263
Target Start/End: Complemental strand, 17415201 - 17415058
Alignment:
Q  121 ttttatcctaaatcattcaact-tcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaa-gatcaaggat 218  Q
    ||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||  | |||||||| ||| ||| | |||   |||| |||| ||||     
T  17415201 ttttatcgtaaataatgcaactctcataggtgttttgagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggac 17415102  T
Q  219 atgaagattgaagataaatggttcttagaaggtttttgaagacaa 263  Q
    |||||||||||| || |||||||||||| || | |||||||||||    
T  17415101 atgaagattgaa-atcaatggttcttaggagttatttgaagacaa 17415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 27918053 - 27917985
Alignment:
Q  89 gtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttga 157  Q
    ||||| || |||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||    
T  27918053 gtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactccataggtgttttga 27917985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 262
Target Start/End: Original strand, 18117023 - 18117201
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    |||||||||| || ||||||||||| |||||||||| ||| |||| |||| || |||||   | |||||||||| ||||||||   | |||| || ||||    
T  18117023 attttgtattgttttcatttgagtcattgtaattcactttaatcc-aaataatgcaactaggttggtgttttgaatctttttaacaaaaaatcatgtaaa 18117121  T
Q  184 tcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagaca 262  Q
    |||| ||| ||| |||||   ||||| ||| |||||||||| | ||||||||||||||||||||||  ||||| ||||||    
T  18117122 tcggcaaaacaagatatcgcgtgaagcatcgaggatatgaaaaatgaagataaatggttcttagaatattttttaagaca 18117201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 18818737 - 18818923
Alignment:
Q  84 attttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaa 183  Q
    ||||| |||| || ||||||||||||||| |||| | ||||||| |||||||| ||| | |||||  ||||| |||||||||| |||||||| || ||||    
T  18818737 attttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattgagaaatcatgtaaa 18818836  T
Q  184 tcggaaaagcaaaatatcttatgaa-gatca-----aggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||| ||| |||   |||   |||| ||| |     |||||||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  18818837 tcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaat 18818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 17240928 - 17240831
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||| |||| || ||||| ||||||| |||||| | |||||| ||||||||| ||||||||||||||  |||||| |||||||||| |||| ||||||||    
T  17240928 ttttctattgttttcattcgagtcgtcgtaatttagttttattctaaatcatgcaacttcataggtg--ttgagtgtttttagtgaaaaatcatataaat 17240831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 264
Target Start/End: Original strand, 35707832 - 35708024
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    |||||||||| || ||||||| || ||| |||| | ||||||||||| |||||||||| ||    | |||||||||||||||||||| |||| |||||||    
T  35707832 gtttgagaaacatgttgtattgttttcacttgatttgttgtaattcagttttatcctagattgcacgacttcataggtgttttgagtgttttgtagtgag 35707931  T
Q  172 aaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaag-attgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     ||| || ||||||  |||| ||| | ||| | ||||| |||||||  |||||| |||||| || || | ||||||||||||| |||||||||||    
T  35707932 gaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaagg--atgaagaattgaatatcaaggtttcttagaaggttgttgaagacaat 35708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 24188007 - 24188190
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaa---tcattcaacttcataggtgttttgagtctttt-tagtgagaaataatat 180  Q
    ||||||||| |  ||||| ||||| |||| ||||| ||||||||||||   |||||||||| || | ||||||||||| |||| ||||||||||| || |    
T  24188007 ttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtattttgtagtgagaaatcatgt 24188106  T
Q  181 aaatcggaaaagcaaaatatcttatgaa-gatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||   || |||   |||  ||||| ||||||| ||||||||||||||||  ||| | |||||||| |||||||||||||||    
T  24188107 aaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttgaagacaat 24188190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 34063919 - 34063839
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 165  Q
    ||||||||| || ||||| |||| ||||||||||| | |||||||||||||| ||||| || | ||||||||||| |||||    
T  34063919 ttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagttttttt 34063839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 30705260 - 30705311
Alignment:
Q  102 ttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtt 153  Q
    |||| ||||||||||| | |||||||||||||||| ||||||||||||||||    
T  30705260 ttgactcgttgtaatttacttttatcctaaatcatgcaacttcataggtgtt 30705311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 22388827 - 22388732
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaat 184  Q
    |||| |||| || ||||||||||| ||||||| || ||||||||| |||||| |||||||||     ||||||||||||| |||||||||| || |||||    
T  22388827 ttttttattgttttcatttgagtcattgtaatccagttttatcctgaatcatgcaacttcatt----ttttgagtcttttcagtgagaaatcatgtaaat 22388732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 31274131 - 31274177
Alignment:
Q  218 tatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaat 31274177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 31449994 - 31450088
Alignment:
Q  81 aatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    |||||||||||||||| ||||| ||||| || ||| ||| |||  |||| ||| || |||||| ||||||||||||||| |||||| ||| ||||    
T  31449994 aatattttgtatttttttcattagagtcattataaatcagtttattccttaattatgcaactttataggtgttttgagtatttttattgataaat 31450088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 1733143 - 1733212
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttg 156  Q
    ||||||| || |||||||||||||||||||||| |||||||||| | |||  ||||  ||||||||||||    
T  1733143 ttgtattgttttcatttgagtcgttgtaattcagttttatcctagagcatgaaactatataggtgttttg 1733212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 32276568 - 32276503
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtg 169  Q
    ||||| |||||||| |  ||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  32276568 gagtcattgtaattgaagtttattctaaatcattcaactccatgggtgttttgagtccttttagtg 32276503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 21843074 - 21843006
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgtttt 155  Q
    ||||||| || ||||| ||||| |||||||| | |||||||||||||||| |||||  |||||||||||    
T  21843074 ttgtattgttttcattcgagtcattgtaatttacttttatcctaaatcatgcaactctataggtgtttt 21843006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 28278494 - 28278434
Alignment:
Q  88 tgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcatag 148  Q
    |||||| || ||| |||||||||||||||||| |||||||||| ||||| ||||| |||||    
T  28278494 tgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactccatag 28278434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 35031731 - 35031843
Alignment:
Q  73 gtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgag 171  Q
    ||||||| || || ||||||| || ||| | |||||||||||| | | |||||||||| ||||| ||| | |||||||||||||||| |||| |||| ||    
T  35031731 gtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaattccataggtgttttgagtgttttgtagtcag 35031830  T
Q  172 aaataatataaat 184  Q
     ||| ||||||||    
T  35031831 gaatcatataaat 35031843  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 17884588 - 17884542
Alignment:
Q  212 caaggatatgaagattgaagataaatggttcttagaaggtttttgaa 258  Q
    |||||||||||||| ||||||| | || |||||||||||||||||||    
T  17884588 caaggatatgaagaatgaagatcattgattcttagaaggtttttgaa 17884542  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 1732656 - 1732756
Alignment:
Q  149 gtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttaga 247  Q
    ||||||||||||||||| || |||||| || ||||| |  ||| ||| | |||  |||||| || ||| ||||||||||||||||| |||| ||||||||    
T  1732656 gtgttttgagtctttttggtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttaga 1732755  T
Q  248 a 248  Q
    |    
T  1732756 a 1732756  T

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Target: scaffold0171 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 21440 - 21619
Alignment:
Q  87 ttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt-agtgagaaataatataaatc 185  Q
    ||||||| || ||| | |||||||||||||||| |||||||||||||||| ||||||||||  ||||||| || ||||  |||||| ||| || ||||||    
T  21440 ttgtattgttttcactcgagtcgttgtaattcacttttatcctaaatcatgcaacttcataattgttttgggtgttttgcagtgaggaatcatgtaaatc 21539  T
Q  186 ggaaaagcaaaatatcttatgaag-atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |  ||| ||| | ||   |||||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  21540 gacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaagacaat 21619  T

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Target: scaffold0188 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 105 - 264
Target Start/End: Complemental strand, 27009 - 26848
Alignment:
Q  105 agtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttt-ttagtgagaaataatataaatcggaaaagcaaaatatctt 203  Q
    |||| |||||||| | |||||||||||||||| ||||| |||||||||||||||| |||  ||||||||||| || |||||||  |||  || | |||      
T  27009 agtcattgtaatttacttttatcctaaatcatacaactacataggtgttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcac 26910  T
Q  204 atg-aagatcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
     || ||||||||||||||||| ||||||| | |||||||||||||| ||| |||||||||||    
T  26909 gtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaat 26848  T

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Target: scaffold0190 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 11771 - 11692
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt 164  Q
    ||||||||  || |||||||| ||||||||||||| |||| ||||||||||| ||||| ||| |||||||||||||||||    
T  11771 ttttgtatagttttcatttgaatcgttgtaattcagttttgtcctaaatcatgcaactacatgggtgttttgagtctttt 11692  T

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Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 11746 - 11692
Alignment:
Q  210 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    ||||||||||| |||| |||| |||||| ||||||||||||||||||||| ||||    
T  11746 atcaaggatattaagaatgaatataaatagttcttagaaggtttttgaagtcaat 11692  T

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Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 13126 - 13043
Alignment:
Q  104 gagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcg 186  Q
    |||| |||| |||||| ||||||||||||| || ||||| || ||||||||||||| |||| ||||||| ||| || |||||||    
T  13126 gagttgttggaattcacttttatcctaaattatgcaactccacaggtgttttgagtgttttgtagtgaggaatcatgtaaatcg 13043  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 12328 - 12387
Alignment:
Q  128 ctaaatcattcaacttcataggtgttttgagtctttt-tagtgagaaataatataaatcg 186  Q
    ||||||||| ||||| |||||||||||||||| |||| ||||||||||| || |||||||    
T  12328 ctaaatcatgcaactccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcg 12387  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 228245 - 228202
Alignment:
Q  98 tcatttgagtcgttgtaattcatttttatcctaaatcattcaac 141  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||    
T  228245 tcattcgagtcgttgtaattcatttttatcataaatcatgcaac 228202  T

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Target: scaffold1026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 1907 - 1817
Alignment:
Q  85 ttttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaat 175  Q
    ||||||||| || |||||  |||| |||||||  | ||||||||||||| || ||||||  |||||  ||||| |||||||||||||||||    
T  1907 ttttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaactttgtaggttatttgaatctttttagtgagaaat 1817  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 22560 - 22507
Alignment:
Q  210 atcaaggatatgaagattgaagataaatggttcttagaaggtttttgaagacaat 264  Q
    |||||||||||||||| ||||| | |||||||| |||||||||||| ||||||||    
T  22560 atcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaat 22507  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 47869 - 47813
Alignment:
Q  110 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttta 166  Q
    |||||||||| |||  ||| |||| ||||||||||||| ||||||||| ||||||||    
T  47869 ttgtaattcaatttattcccaaattattcaacttcatacgtgttttgattcttttta 47813  T

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