View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7350_low_24 (Length: 362)

Name: NF7350_low_24
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7350_low_24
NF7350_low_24
[»] chr7 (29 HSPs)
chr7 (26-217)||(6097333-6097523)
chr7 (25-166)||(32805534-32805675)
chr7 (49-217)||(38128311-38128478)
chr7 (26-166)||(20402386-20402526)
chr7 (32-166)||(30924040-30924174)
chr7 (26-164)||(19434490-19434628)
chr7 (25-166)||(34556940-34557080)
chr7 (29-166)||(13106364-13106501)
chr7 (28-145)||(45842844-45842960)
chr7 (26-217)||(34333281-34333469)
chr7 (27-163)||(29993540-29993675)
chr7 (27-122)||(4628564-4628657)
chr7 (25-165)||(18485957-18486096)
chr7 (27-122)||(34546409-34546502)
chr7 (28-122)||(37631637-37631729)
chr7 (29-122)||(43594131-43594222)
chr7 (74-129)||(41468719-41468774)
chr7 (32-122)||(11686419-11686507)
chr7 (26-163)||(24798456-24798591)
chr7 (60-126)||(34435744-34435810)
chr7 (25-122)||(12218531-12218626)
chr7 (29-217)||(34606261-34606447)
chr7 (61-129)||(38022579-38022647)
chr7 (30-122)||(47656981-47657071)
chr7 (30-163)||(28587911-28588042)
chr7 (92-129)||(4088488-4088525)
chr7 (32-89)||(28262034-28262090)
chr7 (49-164)||(30810675-30810789)
chr7 (28-163)||(47839492-47839625)
[»] chr1 (33 HSPs)
chr1 (25-166)||(28725955-28726096)
chr1 (29-217)||(38595752-38595939)
chr1 (29-166)||(52702195-52702332)
chr1 (29-165)||(30664218-30664353)
chr1 (28-164)||(27457002-27457138)
chr1 (28-165)||(10679509-10679650)
chr1 (71-161)||(33644390-33644480)
chr1 (31-137)||(37350117-37350222)
chr1 (25-217)||(15227735-15227925)
chr1 (29-165)||(24178514-24178649)
chr1 (28-163)||(29657770-29657904)
chr1 (25-163)||(14350330-14350467)
chr1 (20-163)||(5694312-5694454)
chr1 (27-217)||(51065748-51065936)
chr1 (26-163)||(9266781-9266917)
chr1 (27-163)||(12072115-12072250)
chr1 (27-108)||(29683193-29683274)
chr1 (29-137)||(17333362-17333467)
chr1 (28-163)||(48071482-48071615)
chr1 (27-122)||(18043160-18043253)
chr1 (28-164)||(13961211-13961345)
chr1 (25-122)||(42770085-42770180)
chr1 (60-166)||(3784763-3784868)
chr1 (28-166)||(19031865-19032002)
chr1 (129-164)||(23789547-23789582)
chr1 (129-164)||(23822573-23822608)
chr1 (24-134)||(27695776-27695886)
chr1 (28-122)||(29210412-29210504)
chr1 (26-163)||(35985674-35985809)
chr1 (27-89)||(43286720-43286781)
chr1 (95-129)||(45844424-45844458)
chr1 (27-108)||(30657606-30657686)
chr1 (31-108)||(38702041-38702117)
[»] chr6 (29 HSPs)
chr6 (27-217)||(34706718-34706907)
chr6 (31-164)||(1127817-1127950)
chr6 (29-225)||(34712117-34712312)
chr6 (57-164)||(31379418-31379525)
chr6 (26-217)||(23402135-23402324)
chr6 (27-217)||(32929508-32929696)
chr6 (97-166)||(22021731-22021800)
chr6 (51-217)||(26467124-26467288)
chr6 (31-163)||(2350654-2350785)
chr6 (27-163)||(7851212-7851347)
chr6 (26-122)||(34396622-34396716)
chr6 (27-217)||(3515764-3515952)
chr6 (31-130)||(22021633-22021732)
chr6 (28-217)||(27433491-27433678)
chr6 (25-122)||(20897944-20898039)
chr6 (58-129)||(252407-252478)
chr6 (29-163)||(392096-392229)
chr6 (26-166)||(4215692-4215831)
chr6 (62-142)||(11633951-11634030)
chr6 (29-217)||(12145117-12145303)
chr6 (29-163)||(21878400-21878533)
chr6 (74-125)||(3246178-3246229)
chr6 (62-129)||(11616219-11616285)
chr6 (28-122)||(31280320-31280412)
chr6 (71-163)||(2580993-2581085)
chr6 (71-163)||(5323441-5323533)
chr6 (74-127)||(26879236-26879289)
chr6 (28-121)||(29451211-29451301)
chr6 (27-166)||(18276665-18276802)
[»] chr5 (26 HSPs)
chr5 (26-166)||(14214099-14214239)
chr5 (29-166)||(40608586-40608722)
chr5 (31-217)||(1383273-1383457)
chr5 (26-166)||(16972173-16972313)
chr5 (50-166)||(31467740-31467856)
chr5 (29-165)||(39234831-39234966)
chr5 (27-164)||(21944912-21945049)
chr5 (60-166)||(30889480-30889586)
chr5 (62-159)||(14349592-14349689)
chr5 (29-165)||(32188042-32188176)
chr5 (25-217)||(10054353-10054542)
chr5 (27-217)||(13661806-13661994)
chr5 (27-163)||(35132520-35132654)
chr5 (29-163)||(11958020-11958153)
chr5 (25-122)||(4837254-4837348)
chr5 (60-129)||(6042135-6042203)
chr5 (29-122)||(10069969-10070060)
chr5 (29-122)||(35504335-35504426)
chr5 (72-129)||(1069610-1069667)
chr5 (29-122)||(21547489-21547579)
chr5 (29-217)||(34650833-34651018)
chr5 (72-131)||(5302365-5302424)
chr5 (29-163)||(6283562-6283695)
chr5 (34-85)||(14214054-14214105)
chr5 (74-122)||(9721702-9721749)
chr5 (81-129)||(29571571-29571619)
[»] chr2 (33 HSPs)
chr2 (26-166)||(44854390-44854529)
chr2 (30-164)||(29771417-29771550)
chr2 (28-165)||(5282304-5282441)
chr2 (32-217)||(31782565-31782749)
chr2 (61-164)||(15135772-15135875)
chr2 (31-165)||(26269987-26270119)
chr2 (27-165)||(45261901-45262045)
chr2 (62-166)||(28178434-28178538)
chr2 (23-165)||(28012005-28012146)
chr2 (28-122)||(26891758-26891850)
chr2 (29-217)||(20552931-20553117)
chr2 (97-166)||(44331839-44331908)
chr2 (29-109)||(44854310-44854388)
chr2 (29-163)||(44587902-44588035)
chr2 (60-151)||(3336412-3336504)
chr2 (26-217)||(30486207-30486396)
chr2 (27-122)||(561613-561706)
chr2 (29-163)||(31438646-31438779)
chr2 (31-130)||(44331741-44331840)
chr2 (29-166)||(43637165-43637300)
chr2 (25-166)||(20252736-20252877)
chr2 (27-122)||(32860100-32860193)
chr2 (27-163)||(22567600-22567735)
chr2 (26-166)||(27856446-27856585)
chr2 (176-217)||(29771568-29771609)
chr2 (55-164)||(29999042-29999150)
chr2 (61-122)||(30834456-30834517)
chr2 (26-163)||(22068373-22068508)
chr2 (62-128)||(40210240-40210306)
chr2 (73-122)||(20431481-20431530)
chr2 (60-129)||(30217651-30217719)
chr2 (28-108)||(22887749-22887828)
chr2 (28-108)||(32360977-32361056)
[»] chr4 (38 HSPs)
chr4 (26-211)||(292111-292295)
chr4 (27-217)||(34151119-34151307)
chr4 (56-217)||(28119906-28120066)
chr4 (31-166)||(22225795-22225930)
chr4 (25-166)||(16572537-16572678)
chr4 (25-217)||(11893401-11893592)
chr4 (28-158)||(55594130-55594259)
chr4 (28-158)||(10110057-10110189)
chr4 (69-164)||(6493751-6493846)
chr4 (29-217)||(37402759-37402939)
chr4 (29-217)||(8749796-8749985)
chr4 (29-217)||(54897308-54897494)
chr4 (24-134)||(26493792-26493902)
chr4 (104-166)||(47092657-47092719)
chr4 (118-166)||(28120099-28120147)
chr4 (29-224)||(32217045-32217237)
chr4 (56-151)||(3999451-3999545)
chr4 (28-217)||(18067879-18068066)
chr4 (27-163)||(789583-789718)
chr4 (19-163)||(16536038-16536181)
chr4 (25-122)||(43202478-43202573)
chr4 (20-163)||(32202533-32202675)
chr4 (26-217)||(33108673-33108861)
chr4 (72-119)||(24142268-24142315)
chr4 (51-129)||(20654696-20654774)
chr4 (26-163)||(43944504-43944640)
chr4 (27-163)||(15186241-15186376)
chr4 (29-157)||(54054548-54054675)
chr4 (29-163)||(3783554-3783687)
chr4 (67-129)||(19350771-19350833)
chr4 (30-163)||(19503158-19503289)
chr4 (28-122)||(42898841-42898933)
chr4 (60-129)||(9964751-9964820)
chr4 (29-122)||(28755621-28755711)
chr4 (27-163)||(29591187-29591322)
chr4 (27-108)||(47231980-47232060)
chr4 (176-212)||(3783646-3783682)
chr4 (28-108)||(4268930-4269009)
[»] chr8 (40 HSPs)
chr8 (29-164)||(18955693-18955828)
chr8 (29-224)||(40267921-40268115)
chr8 (29-166)||(29566700-29566837)
chr8 (30-164)||(43714240-43714373)
chr8 (29-166)||(39751521-39751658)
chr8 (60-166)||(24261396-24261502)
chr8 (50-151)||(37479588-37479689)
chr8 (61-217)||(42655277-42655431)
chr8 (61-166)||(39206217-39206322)
chr8 (76-228)||(2490147-2490297)
chr8 (219-317)||(27440939-27441037)
chr8 (74-164)||(2270569-2270659)
chr8 (27-161)||(4811555-4811689)
chr8 (25-217)||(4537744-4537934)
chr8 (29-217)||(34228682-34228868)
chr8 (27-163)||(13643010-13643144)
chr8 (27-163)||(13743435-13743569)
chr8 (27-163)||(27988552-27988687)
chr8 (27-163)||(28045854-28045989)
chr8 (29-210)||(2805267-2805446)
chr8 (30-163)||(16888597-16888728)
chr8 (26-163)||(33357182-33357318)
chr8 (31-108)||(20831661-20831737)
chr8 (60-153)||(22199240-22199333)
chr8 (49-118)||(33899108-33899177)
chr8 (20-163)||(30675625-30675767)
chr8 (25-84)||(2490320-2490379)
chr8 (28-122)||(11112638-11112730)
chr8 (27-163)||(168464-168599)
chr8 (29-122)||(37373206-37373296)
chr8 (61-129)||(37713989-37714057)
chr8 (23-122)||(4648189-4648285)
chr8 (26-108)||(9063160-9063240)
chr8 (175-217)||(9934557-9934599)
chr8 (60-118)||(33124591-33124649)
chr8 (27-163)||(29444193-29444328)
chr8 (25-89)||(16785083-16785145)
chr8 (56-163)||(16890533-16890639)
chr8 (28-163)||(36730444-36730577)
chr8 (73-129)||(42449008-42449064)
[»] scaffold0001 (1 HSPs)
scaffold0001 (61-217)||(508987-509144)
[»] chr3 (31 HSPs)
chr3 (61-217)||(51665715-51665870)
chr3 (60-158)||(53163794-53163892)
chr3 (81-161)||(31436313-31436393)
chr3 (28-163)||(49893330-49893464)
chr3 (94-157)||(12011681-12011744)
chr3 (62-129)||(26966528-26966595)
chr3 (27-217)||(46352632-46352820)
chr3 (29-217)||(10617284-10617469)
chr3 (28-163)||(272219-272353)
chr3 (57-129)||(25743837-25743909)
chr3 (74-166)||(27644045-27644137)
chr3 (29-163)||(48725271-48725404)
chr3 (29-129)||(27994387-27994486)
chr3 (29-217)||(39074419-39074604)
chr3 (25-141)||(34300689-34300804)
chr3 (27-163)||(52520679-52520814)
chr3 (26-210)||(858586-858768)
chr3 (28-166)||(41304004-41304139)
chr3 (29-163)||(2505350-2505482)
chr3 (72-129)||(13898979-13899036)
chr3 (62-122)||(40614462-40614522)
chr3 (35-163)||(50395616-50395742)
chr3 (29-163)||(4168183-4168316)
chr3 (33-122)||(7468417-7468502)
chr3 (95-129)||(49340124-49340158)
chr3 (27-108)||(11308318-11308398)
chr3 (29-122)||(20923992-20924083)
chr3 (29-89)||(2362801-2362860)
chr3 (27-166)||(18014670-18014808)
chr3 (60-163)||(41553993-41554095)
chr3 (18-122)||(43786860-43786962)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-217)||(53685-53872)
[»] scaffold0264 (1 HSPs)
scaffold0264 (27-163)||(22959-23094)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-129)||(66430-66498)
[»] scaffold0021 (1 HSPs)
scaffold0021 (25-122)||(116200-116295)
[»] scaffold0188 (1 HSPs)
scaffold0188 (30-217)||(6110-6295)
[»] scaffold0206 (1 HSPs)
scaffold0206 (28-121)||(11066-11155)
[»] scaffold0045 (1 HSPs)
scaffold0045 (54-122)||(53441-53507)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-89)||(68417-68480)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 6097333 - 6097523
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6097333 taagggaaatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatcca 6097432  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||||||||||||||||||||||||||||| |||||||         |||| |||||||||||||| ||||||| ||||||||||||||    
T  6097433 taaataagtcaacaaaacttccttttatggtaagaatttccttttttta-tatgcttaacccgtgccccggaggcactggttagcatgaccc 6097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 32805534 - 32805675
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| || ||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  32805534 ttaagggaaatgctaaccggtgttcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaaaattgtttaattaatcc 32805633  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  32805634 ataaataagtcaacaaaacttccttttatggtaagaatttcc 32805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 38128311 - 38128478
Alignment:
Q  49 cccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcct 148  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38128311 cccgggacaccggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcct 38128410  T
Q  149 tttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||| |||||||        ||||| |||||| ||||||| ||||||||||||||||||||||    
T  38128411 tttatggtaagaatttcc-tttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccc 38128478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 20402386 - 20402526
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| ||  |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  20402386 taagggaaatgctaaccggtgtccccgggacattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatcca 20402485  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  20402486 taaataagtcaacaaaacttccttttatagtaagaatttcc 20402526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 30924174 - 30924040
Alignment:
Q  32 aaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaata 131  Q
    |||||||||||| ||| |||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  30924174 aaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattagtgcattgaaaattgtttaattaattcataaata 30924075  T
Q  132 agtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||||||||| |||||||    
T  30924074 agtcaacaaaacttccttttatggtaagaatttcc 30924040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 19434490 - 19434628
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||| |||||| |||||| |||  ||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19434490 taagagaaatgttaaccggtgcctccggggcactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcca 19434589  T
Q  126 taaataagtcaacaaaacttccttttatggtaataattt 164  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  19434590 taaataagtcaacaaaacttccttttatggtaagaattt 19434628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 34557080 - 34556940
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||| | ||| |||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34557080 ttaagggaaatgctaactggtgc-cccggggcattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcc 34556982  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||| |||||| ||||| |||||||    
T  34556981 ataaataagtcaacaaaactttcttttagggtaagaatttcc 34556940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 13106501 - 13106364
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaagga-taataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    ||||||||||||||| ||| | |||| ||| |||||| || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13106501 gggaaatgctaaccggtgccctcggg-cactggttaaagaataataaaaagggaaattatttgttaattattgcattgaaaattgtttaattaatccata 13106403  T
Q  128 aataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  13106402 aataagtcaacaaaacttccttttatggtaagaatttcc 13106364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 45842960 - 45842844
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| |||||  ||| ||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  45842960 agggaaatgctaaccggtgctctgggg-cactggttagggataataaaaaagaaaattatatgttaattattgcattaaaaattatttaattaattcata 45842862  T
Q  128 aataagtcaacaaaactt 145  Q
    ||||||||||||||||||    
T  45842861 aataagtcaacaaaactt 45842844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 34333281 - 34333469
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  |||||| ||||||| ||||||| ||||||||  |    
T  34333281 taagggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattta 34333378  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||  | ||||| | |  |||||||||||||||||| ||||        |||||||||||||||||||| | |||||||||||||| |||||    
T  34333379 taataatgtcaaaacagtttccttttatggtaataa-ttcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 34333469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 29993675 - 29993540
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||| | ||| |||||| |||||||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  29993675 aagggaaatgctaacgggtgcccccggggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttat 29993578  T
Q  127 aaataagtcaaca-aaacttccttttatggtaataatt 163  Q
    ||  ||||||| |  || ||||||||||||||||||||    
T  29993577 aataaagtcaaaatcaatttccttttatggtaataatt 29993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 4628564 - 4628657
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||||| || ||| |||||||||||||| || ||||||||||||||||  || ||| | ||||| ||||||||||||||||    
T  4628564 aagggaaatgctaaccgatgcccctggggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtttaattaat 4628657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 18485957 - 18486096
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||||| ||  |||||||||||||||  |||||| || |||| ||||||| ||||||||      
T  18485957 ttaagggaaatgctaaccggtgcccccggggcactggttaaggat-attgaaaaggaaattatatagtaattaatgtattg-aaattgtgtaattaattt 18486054  T
Q  125 ataaataagtcaacaa-aacttccttttatggtaataatttc 165  Q
    ||||  |||| || || |  ||||||||||||||||||||||    
T  18486055 ataataaagttaaaaacagtttccttttatggtaataatttc 18486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 34546502 - 34546409
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||||| |||| |  ||||||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  34546502 aagggaaatgctaaccgatgcccccgaggtaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 34546409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 37631729 - 37631637
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||| |||||| |||| ||||| ||| |||||||||| |||||||||||||||||||  |||||| |||||| |||||| | ||||||||    
T  37631729 agggaaatgttaaccggtgcttccggggcacgggttaaggat-ataaaaaaggaaattatataataattaatgcatt-aaaattatgtaattaat 37631637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 43594222 - 43594131
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| ||  ||||| |||| ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggata-taaaaaaggaaattatataatagttaatgcattg-aaattgtataattaat 43594131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 41468774 - 41468719
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||||||||  |||||||| ||||||||||||| |||||||||| ||||    
T  41468774 aaaaaggaaattatatagtaattattacattgaaaattgtgtaattaatccttaaa 41468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 11686507 - 11686419
Alignment:
Q  32 aaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||| | |||| |||||| || ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  11686507 aaatgctaactggtgcttccgggatactggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 11686419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 24798591 - 24798456
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| ||| |||||| |||  ||| ||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  24798591 taagggaaatgctaaccggtgcccccggg-cacttgttgaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattta 24798495  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||||| || |  ||||||||||||||||||||    
T  24798494 taataaagtcaaaaacagtttccttttatggtaataatt 24798456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 34435810 - 34435744
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| |||||| ||||||||||||||||||  || |||||||||| |||||||| |||| |||||||    
T  34435810 ggttcaggatactaaaaaaggaaattatataatagttattgcattaaaaattgtgtaatcaatccat 34435744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 12218626 - 12218531
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||| ||| |||||| ||| || |||| || || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  12218626 ttaagggaaatgctaaccggtgcccccggggcactggataagtat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 12218531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 34606261 - 34606447
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||| | |||  ||||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| |||||||  |||||||  ||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgaaattaatttataa 34606358  T
Q  129 ataagtcaaca-aaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| |  |  |||||||||||||||||||| ||        ||||| |||||||||||||| |  ||||||||||||| |||||    
T  34606359 taaagtcaaaagcagtttccttttatggtaataattacc-ttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccc 34606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 38022647 - 38022579
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||| ||| |||| |||||||||  || |||||| |||||||||||| ||||||||| |||||    
T  38022647 gttaaggatactaataaagaaaattatatagtagttattgtattgaaaattgtataattaatctataaa 38022579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 47656981 - 47657071
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||| |||| | ||| ||| |||||||||| || |||||| |||||||||  |||||| ||||||| ||||||| ||||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggat-atgaaaaagaaaattatatagtaattaatgcattg-aaattgtgtaattaat 47657071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 28587911 - 28588042
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||| ||| ||||| |||| ||||||||||| | ||||||||||||||||  || | | || ||||||| |||| ||||||||  ||||     
T  28587911 ggaaatgctaaccggtgcccccgg-acactggttaaggata-tgaaaaaggaaattatatagtagtcaatgtattgaaa-ttgtgtaattaatttataat 28588007  T
Q  130 taagtcaacaa-aacttccttttatggtaataatt 163  Q
     ||||||| || || || |||||||||||||||||    
T  28588008 aaagtcaaaaacaattttcttttatggtaataatt 28588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 4088525 - 4088488
Alignment:
Q  92 taattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  4088525 taattattgcattgaaaattgtataattaatctataaa 4088488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 28262034 - 28262090
Alignment:
Q  32 aaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatat 89  Q
    |||||||||||| |||  ||||| |||||||||||||| || ||||||||||||||||    
T  28262034 aaatgctaaccggtgcctccgggtcaccggttaaggat-atgaaaaaggaaattatat 28262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 30810675 - 30810789
Alignment:
Q  49 cccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttcc 147  Q
    |||||| ||| ||||||||||| | ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||  ||||||| || |  || |    
T  30810675 cccggggcactggttaaggata-tgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataataaagtcaaaaacagttttc 30810772  T
Q  148 ttttatggtaataattt 164  Q
    |||||||||||||||||    
T  30810773 ttttatggtaataattt 30810789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 47839492 - 47839625
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| || |||||||  || ||||||||||| | ||||||||| ||||||  || ||| | |||||||| |||| ||||||||  |||    
T  47839492 agggaaatgctaaccggtg-tcccggggtactggttaaggata-tgaaaaaggaatttatataatagttaatacattgaaa-ttgtgtaattaatttata 47839588  T
Q  128 aataagtcaacaaaactt-ccttttatggtaataatt 163  Q
    |  ||||||| || | || ||||||||||||||||||    
T  47839589 ataaagtcaaaaacagtttccttttatggtaataatt 47839625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 28726096 - 28725955
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28726096 ttaagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 28725997  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  28725996 ataaataagtcaacaaaacttccttttatggtaagaatttcc 28725955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 38595939 - 38595752
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 38595840  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||||||||||||| ||||| |        | ||| |||||| ||||||| ||||||||||||||||||||||    
T  38595839 ataagtcaacaaaacttccttttatggtaagaattttc-tttttttgcatgcttaaccagtgccccggaggcaccggttagcatgaccc 38595752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 52702332 - 52702195
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52702332 gggaaatgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 52702233  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  52702232 ataagtcaaaaaaacttcattttatggtaataatttcc 52702195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 30664353 - 30664218
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||  ||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30664353 gggaaatgctaaccg-tgcctccggggcattggttaaggataataaaaaagaaaattatatgttaattattgcattgaaaattgtttaattaatctataa 30664255  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttc 165  Q
    |||||||||||||||||||||||||||||| ||||||    
T  30664254 ataagtcaacaaaacttccttttatggtaagaatttc 30664218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 27457138 - 27457002
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    ||||||||||||| || ||| |||||| ||  |||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  27457138 agggaaatgctaatcggtgcccccggggcaagggttaaagataataaaaagtgaaattatatgttaattagtgcattgaaaattgtttaattaatccata 27457039  T
Q  128 aataagtcaacaaaacttccttttatggtaataattt 164  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27457038 aataagtcaacaaaacttccttttatggtaaaaattt 27457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 10679509 - 10679650
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca-- 125  Q
    ||||||||| |||||| |||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |      
T  10679509 agggaaatgttaaccggtgctcccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 10679607  T
Q  126 ---taaataagtcaacaaaacttccttttatggtaataatttc 165  Q
       ||||||||||||||||||||||||||||||||| ||||||    
T  10679608 aattaaataagtcaacaaaacttccttttatggtaaaaatttc 10679650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 33644480 - 33644390
Alignment:
Q  71 ataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataa 161  Q
    ||||||||| |||||||||  |||||||||||||||||||||| |||||||| |||||||| |||| ||||  ||||||||||| ||||||    
T  33644480 ataaaaaagaaaattatataataattattgcattgaaaattgtgtaattaattcataaatatgtcatcaaagtttccttttatgataataa 33644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 37350117 - 37350222
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||| ||||||| || || |||| ||| | ||||||||| |||||||  |||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  37350117 gaaatactaaccggtgttctcggggcactgattaaggatattaaaaaat-aaattatatggtaattgttgcattgaaaattgtgtaattaatccataaat 37350215  T
Q  131 aagtcaa 137  Q
    |||||||    
T  37350216 aagtcaa 37350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 15227735 - 15227925
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| | | || ||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| ||||||| ||||||||      
T  15227735 ttaagggaaatgctaaccggtaccccgggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattg 15227832  T
Q  125 ataaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||  ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| |||||||||||||||| |||||    
T  15227833 ataataaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaagaccc 15227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 24178649 - 24178514
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||||||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||| ||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatctataa 24178552  T
Q  129 ataagtcaaca-aaacttccttttatggtaataatttc 165  Q
      ||||||| |  |  ||||||||||||||||||||||    
T  24178551 taaagtcaaaagcagtttccttttatggtaataatttc 24178514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 29657770 - 29657904
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||||| |||||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaattgata 29657867  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |  ||||||| || |  |||||||| |||||||||||    
T  29657868 ataaagtcaaaaacagtttccttttttggtaataatt 29657904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 14350467 - 14350330
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| ||| |||||  |||||||||||| | || ||||||||||||||||  || ||| |||||| |||||||| ||||||||      
T  14350467 ttaagggaaatgctaaccggtgcccccggagcaccggttaagggt-atgaaaaaggaaattatattgtagttaatgcatt-aaaattgtgtaattaattt 14350370  T
Q  125 ataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||||  | ||||| || || ||||||||||||||||||||    
T  14350369 ataataatgtcaaaaacaatttccttttatggtaataatt 14350330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 5694312 - 5694454
Alignment:
Q  20 ttatcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaatt 119  Q
    |||| ||| ||||||||||||||| |||  ||||| ||| |||||||||| ||||||| |||||||||||  || ||| ||||||| ||||||| |||||    
T  5694312 ttattttatgggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaaagggaaattatatagtagttaatgcattg-aaattgtgtaatt 5694409  T
Q  120 aatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||  ||||||| || |  ||||||||||||||||||||    
T  5694410 aattgataataaagtcaaaaacagtttccttttatggtaataatt 5694454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 51065936 - 51065748
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||  |||||||||| |||||||||| || |||||| |||||||||  || ||| || |||| ||||||| ||||||||  ||    
T  51065936 aagggaaatgctaaccggtgtccccgggacactggttaaggat-atgaaaaagtaaattatatagtagttaatgtattg-aaattgtgtaattaatttat 51065839  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||  ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  51065838 aataaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 51065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 9266917 - 9266781
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| ||  |||| | ||| ||||||||||| | ||||||||||||||||  || ||| |||||||||| |||| |||||||| ||    
T  9266917 taagggaaatgttaaccggtgtccccgcggcactggttaaggata-tgaaaaaggaaattatatagtatttaatgcattgaaa-ttgtgtaattaattca 9266820  T
Q  126 taaataagtcaacaaaactt-ccttttatggtaataatt 163  Q
    |||  ||||||| || | || ||||||||||||||||||    
T  9266819 taataaagtcaaaaacagtttccttttatggtaataatt 9266781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 12072250 - 12072115
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| |||||||||||| ||| |||||| |||||||||||||| || |||||||||||||| |  || ||| ||||||| ||||||| ||||||||  ||    
T  12072250 aaggaaaatgctaaccggtgcccccggggcaccggttaaggat-atgaaaaaggaaattatgtagtagttaatgcattg-aaattgtgtaattaattgat 12072153  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  || |||||||||||||||||    
T  12072152 aataaagtcaaaaacagttttcttttatggtaataatt 12072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 29683193 - 29683274
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||||||| ||| |||||| ||| |||||| ||||  |||||||||||||||||  || ||| ||||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaa 29683274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 17333467 - 17333362
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| ||||||||||| | ||||||||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  17333467 gggaaatgctaaccggtgcccccggg-cactggttaaggata-tgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattcataa 17333371  T
Q  129 ataagtcaa 137  Q
      |||||||    
T  17333370 taaagtcaa 17333362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 48071482 - 48071615
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    ||||||||||||||||||||| |||||  || |||||||||| ||  |||||||||||||||  || ||| ||||||| ||||||| ||||||||  |||    
T  48071482 agggaaatgctaaccgatgct-ccggggtactggttaaggat-atgtaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttata 48071578  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |  ||||||| || |  ||||||||||||||||||||    
T  48071579 ataaagtcaaaaacagtttccttttatggtaataatt 48071615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 18043160 - 18043253
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||| |||  ||||| ||| |||||||| || ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  18043160 aagggaaatgctaaccggtgcctccggggcactggttaagggta-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 18043253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 13961211 - 13961345
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||||||  ||||||  |||||||||  || ||| ||||||| ||||||| ||||||||  |||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaaa--aaattatatagtagttaatgcattg-aaattgtgtaattaattgata 13961307  T
Q  128 aataagtcaacaa-aacttccttttatggtaataattt 164  Q
    |  ||||||| || |  ||| |||||||||||||||||    
T  13961308 ataaagtcaaaaacagtttcattttatggtaataattt 13961345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 42770180 - 42770085
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||| ||| |||||| ||| |||||| | | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  42770180 ttaagggaaatgctaaccggtgcccccggggcactggttaatggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 42770085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 3784868 - 3784763
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttccttttatggtaa 158  Q
    ||||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||  ||||||| || || || ||||||||||||    
T  3784868 ggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaattgataataaagtcaaaaacaattttcttttatggtaa 3784771  T
Q  159 taatttcc 166  Q
    ||||||||    
T  3784770 taatttcc 3784763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 19032002 - 19031865
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| |||||| ||| ||   ||||||||| || ||||||||||||||||  || |||   ||||| ||||||| ||||||||  |||    
T  19032002 agggaaatgctaaccggtgctccgggggcattagttaaggat-atgaaaaaggaaattatatagtagttaaaacattg-aaattgtgtaattaatttata 19031905  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
    |  ||||||| || |  |||||||||||||||||||||||    
T  19031904 ataaagtcaaaaacagtttccttttatggtaataatttcc 19031865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 23789582 - 23789547
Alignment:
Q  129 ataagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||||||||||||||||| |||||    
T  23789582 ataagtcaacaaaacttccttttatggtaagaattt 23789547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 23822608 - 23822573
Alignment:
Q  129 ataagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||||||||||||||||| |||||    
T  23822608 ataagtcaacaaaacttccttttatggtaagaattt 23822573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 27695776 - 27695886
Alignment:
Q  24 cttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatc 123  Q
    |||||||||||||||| |||||| |  | | |||| |||||| |||| ||||||| ||| ||||||  || |||||| ||| |||||||| |||| |||     
T  27695776 cttaagggaaatgctacccgatgttttcagaacactggttaaagatactaaaaaatgaagttatatagtagttattgtattaaaaattgtataatcaatt 27695875  T
Q  124 cataaataagt 134  Q
    |||||| ||||    
T  27695876 cataaaaaagt 27695886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 29210412 - 29210504
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||||| |||  ||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 29210504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 35985809 - 35985674
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| ||| |||||  ||| | ||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  35985809 taagggaaatgttaaccggtgc-cccggatcactgtttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattta 35985713  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  |||| || || |  ||||||||||||||||||||    
T  35985712 taataaagtgaaaaacagtttccttttatggtaataatt 35985674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 43286720 - 43286781
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatat 89  Q
    |||| |||||||||||||||  || ||||||| |||||||||| || ||||||||||||||||    
T  43286720 aaggaaaatgctaaccgatgtccctgggacactggttaaggat-atgaaaaaggaaattatat 43286781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 45844458 - 45844424
Alignment:
Q  95 ttattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||| |||||||||||||||||||||||||||||    
T  45844458 ttattacattgaaaattgtttaattaatccataaa 45844424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 30657606 - 30657686
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||||||| |||||||||| |||  |||||| || || ||||| ||||||||||  || ||| ||||||||||    
T  30657606 aagggaaatgctaaccggtgctcccggggcactagttaagcat-atgaaaaaagaaattatatagtagttaatgcattgaaa 30657686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 38702117 - 38702041
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||| |||||||||| ||| |||||||| | || |||||||||| |||||  || ||| ||||||||||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggt-atgaaaaaggaaactatatagtagttaatgcattgaaa 38702041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 34706718 - 34706907
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34706718 aagggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccat 34706817  T
Q  127 aaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||||||||||||||| |||||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  34706818 aaataagtcaacaaaacttccttttatggtaagaatttcc-ttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccc 34706907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 1127817 - 1127950
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||||||||||  |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  1127817 gaaatgctaaccagtgctccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatttataaat 1127916  T
Q  131 aagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||  ||||||||||| |||||    
T  1127917 aagtcaacaaaacttttttttatggtaagaattt 1127950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 225
Target Start/End: Complemental strand, 34712312 - 34712117
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||  ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||  || ||||||||||| ||||    
T  34712312 gggaaatgctaaccggtgcctccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaattttttttaattaatctataa 34712213  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccccttatttt 225  Q
    |||||||||||||||||||||||||||||| |||||||        ||||| |||||  ||||||| | |||||||||||||||||| | |||||||    
T  34712212 ataagtcaacaaaacttccttttatggtaagaatttcc-attttttgtatgcttaactagtgccccgggggcaccggttagcatgacgctttatttt 34712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 31379525 - 31379418
Alignment:
Q  57 accggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggt 156  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31379525 accggttaaggataataaaaagggaaattatatattaattattgcatttaaaattgtttaattaatccataaataagtcaacataacttccttttatggt 31379426  T
Q  157 aataattt 164  Q
    || |||||    
T  31379425 aagaattt 31379418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 23402135 - 23402324
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||| | |||  ||||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| |||||||  |||||||  |    
T  23402135 taagggaaatgctaactggtgcctccggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgaaattaattta 23402232  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||  ||||||| || |  |||||||||||||||||||| ||        ||||| |||||||||||||| |||||||||||||||| |||||    
T  23402233 taataaagtcaaaaacagtttccttttatggtaataattacc-ttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 23402324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 32929696 - 32929508
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||| ||  |||||||| || | |||||||||||||||| ||||||| ||||||| ||||||| ||||||||  ||    
T  32929696 aagggaaatgctaaccggtgcccccggggcaatggttaagggta-tgaaaaaggaaattatatattaattaatgcattg-aaattgtgtaattaatttat 32929599  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||  ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  32929598 aataaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 32929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 22021731 - 22021800
Alignment:
Q  97 attgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||| |||||||||||| ||||| ||||    
T  22021731 attgcattgaaacttgtgtaattaattcataaataagtcaacaaaatttccttttatggaaataaattcc 22021800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 26467288 - 26467124
Alignment:
Q  51 cgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaactt-cctt 149  Q
    |||| ||||||||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||  ||||||| || | || ||||    
T  26467288 cggggcaccggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataataaagtcaaaaatagtttcctt 26467191  T
Q  150 ttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||| ||||        |||||| ||||| ||||||| ||||||||||||||||||||||    
T  26467190 ttatggtaataa-ttcccttttatggtatgtctaaccagtgccccggaggcaccggttagcatgaccc 26467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 2350654 - 2350785
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||||||||||| |||||||||| ||| |||||||||| || ||||||||||||||||  || ||| || |||| ||||||| ||||||||  ||||      
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataata 2350751  T
Q  131 aagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||||||| || |  ||||||||||||||||||||    
T  2350752 aagtcaaaaatagtttccttttatggtaataatt 2350785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 7851347 - 7851212
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| ||| || ||| |||||||||| || |||||| |||||||||  |||||| |||||| |||||||| ||||||||  ||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggat-atgaaaaagaaaattatatagtaattaatgcatt-aaaattgtgtaattaatttat 7851250  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  ||||||||||||||||||||    
T  7851249 aataaagtcaaaaacagtttccttttatggtaataatt 7851212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 34396716 - 34396622
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  34396716 taagggaaatgctaaccggtgcccccaggacacaggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 34396622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 3515764 - 3515952
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| ||| || ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  3515764 aagggaaatgctaaccggtgcccccagggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttat 3515861  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||  | ||||| || |  |||||||||||||||||| ||||        |||||||||||| ||||||| | |||||||||||||| |||||    
T  3515862 aataatgtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggaccc 3515952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 22021633 - 22021732
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    |||||| ||| || ||| |||||| |||  ||||||| || ||||||| ||| ||||||  ||||||||||||||||| |||| ||||||||||||||||    
T  22021633 gaaatgttaatcggtgcccccggggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 22021732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 27433491 - 27433678
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| |||||| |||||||| ||||||||  ||     
T  27433491 agggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaatttatc 27433588  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |  | ||||| || |  |||||||||||||||||| ||||        ||||||||||||||| |||| | |||||||||||||| |||||    
T  27433589 ataatgtcaaaaatagtttccttttatggtaataa-ttcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 27433678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 20897944 - 20898039
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||| ||| ||| || ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  20897944 ttaagggaaatgctaaccggtgcccccagggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 20898039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 252478 - 252407
Alignment:
Q  58 ccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||||| ||||||  |||||||||| ||| |||||| |||||||||||| |||| ||| ||||||    
T  252478 ccggttaaggatactaaaaatagaaattatatattagttattgtattgaaaattgtgtaatcaattcataaa 252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 392096 - 392229
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 392193  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      | ||||| || |  ||||||||||||||||||||    
T  392194 taatgtcaaaaacagtttccttttatggtaataatt 392229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 4215692 - 4215831
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| ||| |||||| ||| |||||| ||  || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  4215692 taagggaaatgttaaccggtgcccccggggcactggttaa-gagtatgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaattta 4215789  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
    |||  | ||||| || |  |||||||||||||||||||||||    
T  4215790 taataatgtcaaaaacagtttccttttatggtaataatttcc 4215831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 11633951 - 11634030
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaa 142  Q
    ||||||||| |||||||| || ||||||  || ||||||||||||||||||| |||||||| |||||| | ||||| ||||    
T  11633951 ttaaggatactaaaaaagtaa-ttatatagtagttattgcattgaaaattgtgtaattaatacataaaaatgtcaaaaaaa 11634030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 12145303 - 12145117
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| ||| |  |||  |||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataa 12145206  T
Q  129 ataagtcaacaaaactt-ccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| || | || ||||||||| |||||||||||        ||||| |||||| |||| || |||||||||||||||| |||||    
T  12145205 taaagtcaaaaacagtttccttttatgataataatttcc-ttttatagtatgcttaaccagtgctccggaggcaccggttagcaggaccc 12145117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 21878533 - 21878400
Alignment:
Q  29 gggaaatgctaaccgatgc-tcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    ||||||||||||||| ||| ||||||| ||| ||||||||||| | ||||||||||||||||  || ||| ||||||| ||||| ||||||||||  |||    
T  21878533 gggaaatgctaaccggtgcctcccggg-cacgggttaaggata-tgaaaaaggaaattatatagtagttaatgcattg-aaattatttaattaatttata 21878437  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |  ||||||| || |  ||| ||||||||||||||||    
T  21878436 ataaagtcaaaaacagtttctttttatggtaataatt 21878400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 3246229 - 3246178
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||   ||||||||||||| |||||||| |||||||||||    
T  3246229 aaaaaggaaattatacagtaattattgcattaaaaattgtgtaattaatcca 3246178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 11616285 - 11616219
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||| |||||||| || ||||||  || ||||||||||||||||||| |||||||| ||||||    
T  11616285 ttaaggatactaaaaaagtaa-ttatatagtagttattgcattgaaaattgtataattaatacataaa 11616219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 31280320 - 31280412
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||||| |||||||| | ||| | |||| || ||| ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  31280320 agggaaatgctaaccggtgctcccgaggcactgattaa-gagaatgaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaat 31280412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 2580993 - 2581085
Alignment:
Q  71 ataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||||||||||||||||||  || ||| ||||||| ||||| | ||||||||  ||||  ||||||| || || ||||||||||||||||||||    
T  2580993 ataaaaaaggaaattatatagtagttaatgcattg-aaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaataatt 2581085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 5323441 - 5323533
Alignment:
Q  71 ataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||||||||||||||||||  ||||||  ||||| |||||| | ||||||||  ||||  ||||||| || || ||||||||||||||||||||    
T  5323441 ataaaaaaggaaattatatagtaattaaagcatt-aaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaataatt 5323533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 26879289 - 26879236
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||| |||  ||||||||| |||||||||||| |||| ||||||||    
T  26879289 aaaaaggaaattgtatagtaattattgtattgaaaattgtgtaatcaatccata 26879236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 29451301 - 29451211
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaa 121  Q
    |||||||||||||| | |||  ||||| ||||||||||||||| | ||||||||||||||||  || ||| ||||||| ||||||| |||||||    
T  29451301 agggaaatgctaactggtgcctccggg-caccggttaaggata-tgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaa 29451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 18276802 - 18276665
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||||||||| |||| | ||| || ||| ||| ||||||||||| | ||||||||||||||||  || ||| |||||||||  |||| ||||||||  ||    
T  18276802 aagggaaatgttaactggtgcccctggg-cactggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaat-ttgtgtaattaatttat 18276706  T
Q  127 aaataagtcaacaaaactt-ccttttatggtaataatttcc 166  Q
    ||  ||||||| || | || |||||||||||||||||||||    
T  18276705 aataaagtcaaaaacagtttccttttatggtaataatttcc 18276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 14214239 - 14214099
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14214239 taagggaaatgttaaccggtgctcccgaggcacaggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcca 14214140  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  14214139 taaataagtcaacaaaacttccttttatggtaagaatttcc 14214099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 40608722 - 40608586
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40608722 gggaaatgctaaccggtgctcccgggacactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccat-a 40608624  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  40608623 ataaatcaacaaaacttccttttatggtaagaatttcc 40608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 31 - 217
Target Start/End: Complemental strand, 1383457 - 1383273
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||||||||||| || |||||||  || ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1383457 gaaatgctaaccggtg-tcccgggt-actggttaaggataataagaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaaa 1383360  T
Q  131 aagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||||||||||| |||||||        ||||| |||||||||| ||| ||||||||||||||||||||||    
T  1383359 aagtcaacaaaacttccttttatggtaagaatttccttttttttgtatgcttaacccgtgtcccagaggcaccggttagcatgaccc 1383273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 16972173 - 16972313
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||||||||   |||||||||||||||||||||||| |||||| |||||||||||||    
T  16972173 taagggaaatgctaaccgatgcccccggagcactggttaaggataataaaaagaaaaattatatgttaattattgcattaaaaattatttaattaatcca 16972272  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  16972273 taaataagtcaacaaaacttccttttatgataataatttcc 16972313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 31467740 - 31467856
Alignment:
Q  50 ccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcctt 149  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31467740 ccggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctt 31467839  T
Q  150 ttatggtaataatttcc 166  Q
    ||||||||| |||||||    
T  31467840 ttatggtaagaatttcc 31467856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 39234831 - 39234966
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39234831 gggaaatgctaaccggtgctccgggg-cacgggttaaggataataaaaagggaaattatatgttaattattgcattgacaattgtttaattaatccataa 39234929  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttc 165  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  39234930 ataaatcaacaaaacttccttttatggtaagaatttc 39234966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 21945049 - 21944912
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| |||  ||||| ||| |||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||    
T  21945049 aagggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatatattaattattgcattaaaaattgtttaattaatccat 21944950  T
Q  127 aaataagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21944949 aaataagtcaacaaaacttccttttatggtaaaaattt 21944912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 30889586 - 30889480
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaat 159  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||     
T  30889586 ggttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatctataaataagtcaacaaaacttccttttatgataaa 30889487  T
Q  160 aatttcc 166  Q
    |||||||    
T  30889486 aatttcc 30889480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 14349592 - 14349689
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaat 159  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14349592 ttaaggataataaaaagataaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaatttctttttatggtaat 14349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 32188176 - 32188042
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||||||||||||||||||  ||| | ||| ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||  ||||    
T  32188176 gggaaatgctaaccgatgcctccgaggcactggttaag-ataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaattaatttataa 32188078  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttc 165  Q
    |||||| |||||||||| |||||||| ||| ||||||    
T  32188077 ataagttaacaaaactt-cttttatgataaaaatttc 32188042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 10054542 - 10054353
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  |||||| ||||||| ||||||| ||||||||      
T  10054542 ttaagggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatataataattaatgcattg-aaattgtgtaattaattt 10054445  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||  | ||||| | |  |||||||||||||||||| ||||        |||||||||||||||||||| | || ||||||||||| |||||    
T  10054444 ataataatgtcaaaacagtttccttttatggtaataa-ttcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggaccc 10054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 13661806 - 13661994
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||  ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  13661806 aagggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattgat 13661903  T
Q  127 aaataagtca-acaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||  |||||| | | |  |||||||||||||||||| |||         ||||| |||||||||||||| |||||||||||||||| |||||    
T  13661904 aataaagtcagaaacagtttccttttatggtaataa-ttctcttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 13661994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 35132520 - 35132654
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||||||| |||||||||| || ||||||||||||||||  || ||| | ||||| ||||||| ||||||||  ||    
T  35132520 aagggaaatgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtgtaattaatttat 35132617  T
Q  127 aaataagtcaacaaaacttccttttatggtaataatt 163  Q
    ||  ||||||| || | ||   |||||||||||||||    
T  35132618 aataaagtcaaaaacagttttctttatggtaataatt 35132654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 11958153 - 11958020
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||| ||| |||||||||||||||||||  || ||| |||| || ||||||| ||||||||  ||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagat-ataaaaaaggaaattatatagtagttaatgcaatg-aaattgtgtaattaattgataa 11958056  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || |  ||||||||||||||||||||    
T  11958055 taaagtcaaaaacagtttccttttatggtaataatt 11958020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 4837254 - 4837348
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||| |||||| ||| |||||| ||||||||||| ||| | ||||||||||||||||  |||||| ||||||| ||||||| ||||||||    
T  4837254 ttaagggaaatgttaaccggtgc-cccggggcaccggttaagaata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaat 4837348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 6042203 - 6042135
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||| |||| |||||||  |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  6042203 ggttaaagatactaaaaaaa-aaattatatagtaattattgcattgaaaattgtgtaattaatccataaa 6042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 10069969 - 10070060
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| ||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 10070060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 35504426 - 35504335
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| ||| |||||||||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 35504335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 1069667 - 1069610
Alignment:
Q  72 taaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||  |||||||||  ||||||||| |||||||||||||||||| |||||||||    
T  1069667 taaaaaaaaaaattatataataattattgtattgaaaattgtttaattgatccataaa 1069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 21547579 - 21547489
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| ||  |||||| || |||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  21547579 gggaaatgctaaccggtgtccccggg-catcggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 21547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 34651018 - 34650833
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||| || | ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  34651018 gggaaatgctaaccggtgcccccggg-cactggttaagggta-tgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 34650922  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      | ||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  34650921 taatgtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 5302424 - 5302365
Alignment:
Q  72 taaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaata 131  Q
    ||||||| ||||||||||  || |||||| |||||||||||| ||||||||| |||||||    
T  5302424 taaaaaaagaaattatataatagttattgtattgaaaattgtgtaattaatctataaata 5302365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 6283562 - 6283695
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||  ||||| |||  ||||| |||| | |||||| |||||||||  |||||| |||||||||| |||| ||||||||  ||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagata-tgaaaaagaaaattatataataattaatgcattgaaa-ttgtgtaattaatttataa 6283659  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || || || |||||||||||||||||    
T  6283660 taaagtcaaaaacaattttcttttatggtaataatt 6283695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 14214054 - 14214105
Alignment:
Q  34 atgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaatt 85  Q
    |||||||||| ||| |||||||||||||||||| |||  |||||||||||||    
T  14214054 atgctaaccggtgcccccgggacaccggttaagcatacaaaaaaaggaaatt 14214105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 9721749 - 9721702
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  9721749 aaaaaggaaattatatagtaattaatgcattg-aaattgtttaattaat 9721702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 29571571 - 29571619
Alignment:
Q  81 aaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||| ||||||    
T  29571571 aaattatatattatttattgcattgaaaattgtataatcaattcataaa 29571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 4e-57; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 44854529 - 44854390
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| | |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44854529 taagggaaatgctaaccggtactcccggggcactggttaaggataataaaaa-ggaaattatatgttaattattgcattgaaaattgtttaattaatcca 44854431  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  44854430 taaataagtcaacaaaacttcattttatggtaataatttcc 44854390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 29771417 - 29771550
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattacattgaaaatt-attaattaatccataaa 29771515  T
Q  130 taagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||||||||||| |||| |||||    
T  29771516 taagtcaacaaaacttccttttatagtaaaaattt 29771550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 5282441 - 5282304
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||| |||| ||||||  ||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5282441 agggaaatactaatcgatgcctccgggacactgattaaggataataaaaggggaaattatatgttaattattgcattgaaaattgtttaattaatccata 5282342  T
Q  128 aataagtcaacaaaacttccttttatggtaataatttc 165  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  5282341 aataagtcaaaaaaacttccttttatggtaagaatttc 5282304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 31782749 - 31782565
Alignment:
Q  32 aaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaata 131  Q
    |||||||||||| ||  |||||| ||| | ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31782749 aaatgctaaccggtgtccccggggcacggattaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaatccataaata 31782650  T
Q  132 agtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||||||||||| ||||||||||| |||||||        ||||| |||||||||||| | | ||||||||||||||||||||    
T  31782649 agtcaacaaaacttctttttatggtaaaaatttcc-tttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 31782565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 15135875 - 15135772
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaata 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15135875 gttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttttttttatggtaata 15135776  T
Q  161 attt 164  Q
    ||||    
T  15135775 attt 15135772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 26269987 - 26270119
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||||||||||| ||| |||||| ||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26269987 gaaatgctaaccggtgcccccggg-cactggtta-ggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 26270084  T
Q  131 aagtcaacaaaacttccttttatggtaataatttc 165  Q
    |||||||||||||||||||||||||||| ||||||    
T  26270085 aagtcaacaaaacttccttttatggtaaaaatttc 26270119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 45261901 - 45262045
Alignment:
Q  27 aagggaaatgctaaccgatgctcccg-ggacaccggttaaggataataaaaaaggaaatta---tatgttaattattgcattgaaaattgtttaatta-- 120  Q
    ||||||||||||||||| ||| |||  || ||| |||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||      
T  45261901 aagggaaatgctaaccggtgccccccagggcactggttaaggataataaaaagggaaattattatatgttaattattgcattgaaaattgtttaattacc 45262000  T
Q  121 atccataaataagtcaacaaaacttccttttatggtaataatttc 165  Q
    ||  ||| |||||||||||||||||||||||||||||||||||||    
T  45262001 ataaatatataagtcaacaaaacttccttttatggtaataatttc 45262045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 28178434 - 28178538
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataa 161  Q
    ||||||||||||||||   ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||    
T  28178434 ttaaggataataaaaagaaaaattatatattaattattacattgaaaattgtttaattaatccataaataagtcaacaaaactttcttttatggttagaa 28178533  T
Q  162 tttcc 166  Q
    |||||    
T  28178534 tttcc 28178538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 28012146 - 28012005
Alignment:
Q  23 tcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||| |||||||| |||||| ||| ||||||| || ||||||||||| |||||| | |||||||||  ||||||||||||| ||||||||  |||||||    
T  28012146 tcttatgggaaatgataaccggtgc-cccgggatactggttaaggatattaaaaaggaaaattatatagtaattattgcattcaaaattgtggaattaat 28012048  T
Q  123 ccataaataagtcaacaaaacttccttttatggtaataatttc 165  Q
    | |||||||||||||||||  ||| ||||||| ||| ||||||    
T  28012047 ctataaataagtcaacaaagtttctttttatgataagaatttc 28012005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 26891850 - 26891758
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||||| ||| |||||||||| | |||||||| ||||||||||||||||||| ||| ||| ||||||| ||||||| ||||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggat-ataaaaaaggaaattatatattagttaatgcattg-aaattgtgtaattaat 26891758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 20552931 - 20553117
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| || ||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| ||||||| ||||||||  ||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattgataa 20553028  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  20553029 taaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 20553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 44331839 - 44331908
Alignment:
Q  97 attgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||| |||||||||||| ||||| ||||    
T  44331839 attgcattgaaacttgtgtaattaattcataaataagtcaacaaaatttccttttatggaaataaattcc 44331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 44854310 - 44854388
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaa 109  Q
    ||||||||||||||| ||| |||||| | | ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  44854310 gggaaatgctaaccggtgcccccgggtc-ctggttaaggataataaaa-aggaaattatatattaattattgcattgaaaa 44854388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 44587902 - 44588035
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||  || ||| | ||||| ||||||| ||||||||  ||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggat-ataaaaaaggaaattatatagtagttaatacattg-aaattgtgtaattaatttataa 44587999  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      |||| || || |  ||||||||||||||||||||    
T  44588000 taaagtaaaaaacagtttccttttatggtaataatt 44588035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 3336504 - 3336412
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgt--taattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcctttt 151  Q
    ||||||||| | |||||||| |||||||||||  || | ||||||||||||||||| ||||||||||||||| ||||||| |||| ||||||||    
T  3336504 ggttaaggacactaaaaaagaaaattatatgtaatagtaattgcattgaaaattgtataattaatccataaa-aagtcaaaaaaaattcctttt 3336412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 30486207 - 30486396
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||| | ||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| || |||| ||||||| ||||||| | |    
T  30486207 taagggaaatgctaactggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaaacta 30486304  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||  ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  30486305 taataaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 30486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 561706 - 561613
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||| ||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  561706 aagggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 31438646 - 31438779
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||||||| ||| |||||||||| || |||||||||||||||   || ||| ||||||| ||||||| ||||||||  ||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggat-atgaaaaaggaaattatacagtagttaatgcattg-aaattgtgtaattaatttataa 31438743  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || |  ||||||||||| ||||||||    
T  31438744 taaagtcaaaaacagtttccttttatgataataatt 31438779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 44331741 - 44331840
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    |||||| ||| || ||| |||||| |||  ||||||| || ||||||| ||| ||||||  ||||||||||||||||| |||| ||||||||||||||||    
T  44331741 gaaatgttaatcggtgcccccggggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 44331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 43637165 - 43637300
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||| | || |||||||||||||  || ||| |||||||||| |||| ||||||||  ||||    
T  43637165 gggaaatgctaaccggtgc-cccgagacactggttaaggata-tgaataaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataa 43637261  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
      ||||||| || || ||| |||||||||||||||||||    
T  43637262 taaagtcaaaaacaatttctttttatggtaataatttcc 43637300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 20252736 - 20252877
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||| | |||  ||| ||||| |||||| |||   || ||||||||||||||  || ||||||||||||||| ||| |||||||| |    
T  20252736 ttaagggaaatgctaactggtgcctccgtgacactggttaaagatgtcaagaaaggaaattatattgtagttattgcattgaaaactgtgtaattaatac 20252835  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
      ||| || |||| || | || |||||||| |||||||||||    
T  20252836 taaaaaaaatcaaaaatattttcttttatgataataatttcc 20252877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 32860100 - 32860193
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||| |||||| ||| || ||| ||| ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggata-taaaaaaggaaattatatagtatttaatgcattg-aaattgtgtaattaat 32860193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 22567600 - 22567735
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||| ||||| ||   ||||| |||||||||| || ||||| ||||||||||  || ||| || |||| ||||||| ||||||||  ||    
T  22567600 aagggaaatgctaactgatgcccctaagacactggttaaggat-atgaaaaaagaaattatatagtagttaatgtattg-aaattgtgtaattaatttat 22567697  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || || ||||||||||||||||||||    
T  22567698 aataaagtcaaaaataatttccttttatggtaataatt 22567735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 27856585 - 27856446
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| ||| |||||| ||| |||||| ||  || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  27856585 taagggaaatgttaaccggtgcccccggggcactggttaa-gagtatgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaattta 27856488  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
    |||  | ||||| || |  |||||||||||||||||||||||    
T  27856487 taataatgtcaaaaacagtttccttttatggtaataatttcc 27856446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 29771568 - 29771609
Alignment:
Q  176 tatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  29771568 tatgtttaacccgtgccccaggggcaccggttagcatgaccc 29771609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 29999150 - 29999042
Alignment:
Q  55 acaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatg 154  Q
    |||| ||||||| ||  |||||||| |||||||||  || || |||||||||||||||| |||||||| | |||| ||||||| || | ||||||||||     
T  29999150 acactggttaagaatgctaaaaaagaaaattatataatagttcttgcattgaaaattgtgtaattaatac-taaaaaagtcaaaaatatttccttttata 29999052  T
Q  155 gtaataattt 164  Q
     |||||||||    
T  29999051 ctaataattt 29999042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 30834517 - 30834456
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||  ||||||||||||||||||  || ||||||||||||||| ||| ||||||||    
T  30834517 gttaaggatgctaaaaaaggaaattatataatagttattgcattgaaaactgtgtaattaat 30834456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 22068508 - 22068373
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||||||||   ||| |||||| ||| |||||||||| || ||||||| ||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  22068508 taagggaaatgctaacaagtgcccccggggcactggttaaggat-atgaaaaagggaattatatagtagtta-tgcattg-aaattgtataattaattga 22068412  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||||| || |  ||||||||||||||||||||    
T  22068411 taataaagtcaaaaacagtttccttttatggtaataatt 22068373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 40210240 - 40210306
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||| |||| |||||||||||||| |||  || |||||||||||||||| || |||||||| |||||    
T  40210240 ttaaagatattaaaaaaggaaattttatagtagttattgcattgaaaatggtgtaattaattcataa 40210306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 20431481 - 20431530
Alignment:
Q  73 aaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||||||  || ||||||||||||||| ||| ||||||||    
T  20431481 aaaaaaggaaattatattgtagttattgcattgaaaactgtgtaattaat 20431530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 30217719 - 30217651
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||| |||||||| |||||||||  || ||||||||||| ||||||| |||| |||| |||||    
T  30217719 ggttaaggatactaaaaaagaaaattatatagtatttattgcattg-aaattgtgtaatcaatcgataaa 30217651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 22887749 - 22887828
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||||||||||  ||||| ||  |||||||||| || ||||| ||||||||||  || ||| ||||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggat-atgaaaaaagaaattatatagtagttaatgcattgaaa 22887828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 32361056 - 32360977
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    |||||||||||||||| ||| |||||| ||| ||||||||||  | |||||| |||||||||  || ||| ||||||||||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggat-gtgaaaaagaaaattatataatagttaatgcattgaaa 32360977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 9e-55; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 292111 - 292295
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| ||| || ||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  292111 taagggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaattaatcca 292210  T
Q  126 taaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagca 211  Q
    ||||||||||||| ||||||||||||||||||| |||||||        | ||| |||||||||||||| ||||||||||||||||    
T  292211 taaataagtcaaccaaacttccttttatggtaaaaatttcc-tttttttgcatgcttaacccgtgccccggaggcaccggttagca 292295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 34151119 - 34151307
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| |||||||||||||||| |||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  34151119 aaggaaaatgctaaccgatgc-cccggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatccat 34151217  T
Q  127 aaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||||||||||||||| |||||||||||| ||||| |        ||||| |||||||||||||  || |||||||||||||||||||    
T  34151218 aaataagtcaacaaaactttcttttatggtaagaattttcttttttttgtatgcttaacccgtgcccggga-gcaccggttagcatgaccc 34151307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 28120066 - 28119906
Alignment:
Q  56 caccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatgg 155  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28120066 caccggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatgg 28119967  T
Q  156 taataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||| |||||||        ||||| |||||| ||||||| ||| ||||||||||||||||||    
T  28119966 taagaatttcc-tttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccc 28119906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 22225930 - 22225795
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 130  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  22225930 gaaatgctaaccggtgcccccgggacactggttaaggataataaaaagggaaactatatgttaattattgcattaaaaattgtttaattaatccataaat 22225831  T
Q  131 aagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||||| ||| |||||||    
T  22225830 aagtcaacaaaacttccttttatgataaaaatttcc 22225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 16572678 - 16572537
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    |||||| |||||||||||| |||  ||| | ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  16572678 ttaaggaaaatgctaaccggtgcctccgaggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatcc 16572579  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16572578 ataaataagtcaacaaaacttctttttatggtaagaatttcc 16572537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 11893592 - 11893401
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||| | ||| ||| || ||| | |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||     
T  11893592 ttaagggaaatgctaacaggtgcccccagggcactgtttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatct 11893493  T
Q  125 ataaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||||| ||||||| ||| |||||||        ||||| |||||| ||||||| || |||||||||||||||||||    
T  11893492 ataaataagtcaacaaaacttcattttatgataaaaatttccttttttttgtatgcttaaccagtgccccgga-gcaccggttagcatgaccc 11893401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 55594130 - 55594259
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| | |||| ||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  55594130 agggaaatgctaaccggtgc-ctcggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattaaaaattgtttaattaatccata 55594228  T
Q  128 aataagtcaacaaaacttccttttatggtaa 158  Q
    | |||||||||||||||||||||||||||||    
T  55594229 agtaagtcaacaaaacttccttttatggtaa 55594259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 10110189 - 10110057
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattg--aaaattgtttaattaatcca 125  Q
    |||||||||||||||| |||  ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||| |    
T  10110189 agggaaatgctaaccggtgcctccgggacactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaaaattgtttaattaatcta 10110090  T
Q  126 taaataagtcaacaaaacttccttttatggtaa 158  Q
    |||||||||||||||||||| ||||||||||||    
T  10110089 taaataagtcaacaaaactttcttttatggtaa 10110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 6493846 - 6493751
Alignment:
Q  69 taataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataattt 164  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6493846 taataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaagaattt 6493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 37402939 - 37402759
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||||||||| |||| ||||| |||||||||||| |||||||||||||||||||||      |||||||||||||||||||||||    
T  37402939 gggaaatgctaaccggtgctcccgg-acactggttacggataataaaaagggaaattatatgttaattatta-----aaaattgtttaattaatccataa 37402846  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||||||||||||| |||||||        ||||| |||||| |||||||   ||||||||||||||||||||    
T  37402845 ataagtcaacaaaacttccttttatggtaagaatttcc--ttttttgtatgcttaaccagtgccccgagggcaccggttagcatgaccc 37402759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 8749985 - 8749796
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||| ||| ||| || ||||| || |||||||| ||||| |||  |||||||| ||||||||||||| ||||||||| ||||    
T  8749985 gggaaatgctaaccggtgctccgggg-cactggctaaggttactaaaaaagaaaattttataataattattacattgaaaattgtgtaattaatctataa 8749887  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttcc--nnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||  || || |||||||||||| ||||          ||||| ||||||||||||||   ||||||||||||||||||||    
T  8749886 ataagtcaacaaagttttctattatggtaataaattccttttttttttgtatgcttaacccgtgccccaagggcaccggttagcatgaccc 8749796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 54897308 - 54897494
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||||| || | ||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgagaaaggaaattatatagtagttaatgcattg-aaattgtataattaatttataa 54897405  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| || || |||||||||||||||||||||||        |||||||||||| ||| ||| |||||||||||||||| |||||    
T  54897406 taaagtcaaaaacaatttccttttatggtaataatttcc-ttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggaccc 54897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 26493902 - 26493792
Alignment:
Q  24 cttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatc 123  Q
    |||||||||||||||| | |||| |||||| |||| |||||| |||| ||| ||| ||||||||||  || |||||||||| |||||||| |||| ||||    
T  26493902 cttaagggaaatgctacctgatgttcccggaacactggttaaagatactaacaaatgaaattatatagtagttattgcattaaaaattgtataatcaatc 26493803  T
Q  124 cataaataagt 134  Q
    |||||| ||||    
T  26493802 cataaaaaagt 26493792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 47092657 - 47092719
Alignment:
Q  104 tgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  47092657 tgaaaattgtttgattaatccataaataagtcaacaaaacttcattttatgataaaaatttcc 47092719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 28120147 - 28120099
Alignment:
Q  118 ttaatccataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28120147 ttaatccataaataagtcaacaaaacttccttttatggtaagaatttcc 28120099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 32217045 - 32217237
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||| | ||| |||||| ||| |||||||||| |||||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 32217142  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccccttattt 224  Q
      ||||||| || | ||  ||||||| |||||| ||||        ||||| |||||| ||||||| ||||||||||||| || ||||| ||||||    
T  32217143 taaagtcaaaaacagttttttttatgataataa-ttcccttttatggtatgcttaacctgtgccccggaggcaccggttaacaggaccctttattt 32217237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 3999545 - 3999451
Alignment:
Q  56 caccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcctttt 151  Q
    |||||||||| |||| ||||||||||||||| ||  || || |||||||||||||||| |||| |||||||||| ||||||| |||  ||||||||    
T  3999545 caccggttaatgatactaaaaaaggaaattacatagtagttgttgcattgaaaattgtgtaataaatccataaa-aagtcaaaaaagtttcctttt 3999451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 18068066 - 18067879
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| |||||| |||||||| ||||||||  ||     
T  18068066 agggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaatttatc 18067969  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |  | ||||| || |  |||||||||||||||||| ||||        ||||||||||||||| |||| | |||||||||||||| |||||    
T  18067968 ataatgtcaaaaatagtttccttttatggtaataa-ttcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 18067879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 789718 - 789583
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  789718 aagggaaatgctaaccggtgcccccggggcacgggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttat 789621  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  | ||||| || |  ||||||||||||||||||||    
T  789620 aataatgtcaaaaacagtttccttttatggtaataatt 789583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 16536038 - 16536181
Alignment:
Q  19 tttatcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaat 118  Q
    ||||| ||||||||||||||||||| ||| |||||| ||| | |||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||    
T  16536038 tttattttaagggaaatgctaaccggtgcccccggggcacggattaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaat 16536135  T
Q  119 taatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||||  ||||  | ||||| || |  ||||||||||||||||||||    
T  16536136 taatttataataatgtcaaaaacagtttccttttatggtaataatt 16536181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 43202573 - 43202478
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||| ||| |||||| |||  ||||||| | || ||||||||||||||||  |||||| |||||| |||||||| ||||||||    
T  43202573 ttaagggaaatgctaaccggtgcccccggggcactagttaagggt-atgaaaaaggaaattatatagtaattaatgcatt-aaaattgtgtaattaat 43202478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 32202675 - 32202533
Alignment:
Q  20 ttatcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaatt 119  Q
    |||| ||| |||||||| |||||| ||  |||||| ||| ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| |||||    
T  32202675 ttattttatgggaaatgttaaccggtgtccccggggcacgggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaatt 32202578  T
Q  120 aatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||  ||||||| || |  ||||||||||| ||||||||    
T  32202577 aatttataataaagtcaaaaacagtttccttttatgataataatt 32202533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 33108861 - 33108673
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    ||||||||||| |||||| |||  ||||| ||| ||||||| ||| | ||||||||||||||||  || ||| |||||||||| | || ||||||||  |    
T  33108861 taagggaaatgttaaccggtgcctccggggcactggttaag-ata-tgaaaaaggaaattatataatagttaatgcattgaaa-tagtataattaattga 33108765  T
Q  126 taaataagtcaacaaaactt-ccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||  ||||||| || | || |||||||||||||||||| ||        ||||| |||||||||||||| |||||||||||||||| |||||    
T  33108764 taataaagtcaaaaacagtttccttttatggtaataatt-cctttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 33108673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 24142315 - 24142268
Alignment:
Q  72 taaaaaaggaaattatatgttaattattgcattgaaaattgtttaatt 119  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  24142315 taaaaaaagaaattatatagtaattattgcattgaaaattgtttaatt 24142268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 20654696 - 20654774
Alignment:
Q  51 cgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||| ||||| |||| |||| |||||||||||||||||   ||  |||||||||||||||||| ||||||||| |||||    
T  20654696 cggggcaccgtttaatgatactaaaaaaggaaattatagagtagctattgcattgaaaattgtgtaattaatcaataaa 20654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 43944504 - 43944640
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||||| |||  ||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  43944504 taagggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattta 43944601  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  | ||||| || |  ||||||||||||||||||||    
T  43944602 taataatgtcaaaaacagtttccttttatggtaataatt 43944640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 15186241 - 15186376
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| | ||||| ||||||| ||||||||  ||    
T  15186241 aagggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatccattg-aaattgtgtaattaatttat 15186338  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  | ||||| || |  ||||||||||||||||||||    
T  15186339 aataatgtcaaaaacagtttccttttatggtaataatt 15186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 54054548 - 54054675
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| || ||| |||||||||||||| || ||||| ||||||||||  || ||| ||||||| |||| || ||||||||  ||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggat-atgaaaaaagaaattatataatagttaatgcattg-aaatagtgtaattaattgataa 54054645  T
Q  129 ataagtcaacaa-aacttccttttatggta 157  Q
      ||||||| || || ||||||||||||||    
T  54054646 taaagtcaaaaacaatttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 3783687 - 3783554
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||  ||||| ||||||||||  || || ||||| ||||||||||  || ||| |||||| |||||||||||||||||  ||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacat-atgaaaaatgaaattatatagtagttaatgcatt-aaaattgtttaattaattgataa 3783590  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || |  || |||||||||||||||||    
T  3783589 taaagtcaaaaacagttttcttttatggtaataatt 3783554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 19350833 - 19350771
Alignment:
Q  67 gataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||| ||||||||||||||| ||  ||||||||| |||||||||||| |||| ||| ||||||    
T  19350833 gatattaaaaaaggaaattaaatagtaattattgaattgaaaattgtgtaatcaattcataaa 19350771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 19503289 - 19503158
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||| ||||||||||  || |||||||||| || ||||||||||||||||  || ||| | ||||| ||||||| ||||||||  ||||     
T  19503289 ggaaatgctaaccggtgctcccggg-tactggttaaggat-atgaaaaaggaaattatatactagttaatacattg-aaattgtgtaattaatttataat 19503193  T
Q  130 taagtcaacaa-aacttccttttatggtaataatt 163  Q
     ||||||| || |  |||||||||| |||||||||    
T  19503192 aaagtcaaaaacagtttccttttattgtaataatt 19503158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 42898933 - 42898841
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||| ||| || |||| || || ||| ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  42898933 agggaaatgttaatcggtgcttccagggcactggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 42898841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 9964751 - 9964820
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||  ||||||  |||||||||| |||||||||||||||||| || | ||||| ||| |||||    
T  9964751 ggttaaggatgttaaaaatagaaattatatattaattattgcattgaaatttttgtaattgatcaataaa 9964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 28755621 - 28755711
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| || |||| || ||| ||||||||||| | ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  28755621 gggaaatgctaaccggtg-tcccagggcactggttaaggata-tgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 28755711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 29591187 - 29591322
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||| | ||| |||||| ||| ||||||| || || || |||||||||||||  || ||| ||||||| ||||||| || |||||  ||    
T  29591187 aagggaaatgctaactggtgcccccggggcactggttaagaat-atgaataaggaaattatatagtagttaatgcattg-aaattgtgtacttaatttat 29591284  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  ||||||||||||||||||||    
T  29591285 aataaagtcaaaaacagtttccttttatggtaataatt 29591322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 47232060 - 47231980
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||||||| ||| |||||  ||| ||||||||||  | ||||||||||||||||  || ||| ||||||||||    
T  47232060 aagggaaatgctaaccggtgcccccggagcactggttaaggat-gtgaaaaaggaaattatataatagttaatgcattgaaa 47231980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 3783646 - 3783682
Alignment:
Q  176 tatgtttaacccgtgcccctgaggcaccggttagcat 212  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  3783646 tatgtttaaccggtgccccggaggcaccggttagcat 3783682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 4269009 - 4268930
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    |||||||||||||||| ||| |||||| ||| |||||||| | || |||||||||| |||||  || ||| ||||||||||    
T  4269009 agggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaactatatagtagttaatgcattgaaa 4268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 18955693 - 18955828
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||||||| |||| | ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18955693 gggaaatgctaaccgatgcccccgtggcactggttaatgataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 18955792  T
Q  129 ataagtcaacaaaacttccttttatggtaataattt 164  Q
    |||||||||||||||||||||||||||||| |||||    
T  18955793 ataagtcaacaaaacttccttttatggtaagaattt 18955828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 40267921 - 40268115
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||||||||||||| |||  |||||  ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  40267921 gggaaatgctaaccaatgtccccggagcactggttaaggataataaaaagggaaattataggttaattattgcattgaaaattgtttaattaatctataa 40268020  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccccttattt 224  Q
    |||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| |  ||||| |||| |||||||| ||||||    
T  40268021 ataagtcaacaaaacttccttttatgataataatttcc-tttttttgtatgtttaacccgtgccccaggagcaccagttaacatgaccctttattt 40268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 29566700 - 29566837
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29566700 gggaaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccataa 29566799  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||| ||||||||||||| ||||||| ||| |||||||    
T  29566800 ataaatcaacaaaacttctttttatgataagaatttcc 29566837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 43714373 - 43714240
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||| |||||||| ||| |||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43714373 ggaaacgctaaccggtgcccccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 43714275  T
Q  130 taagtcaacaaaacttccttttatggtaataattt 164  Q
    ||||||||||||||||||||||||||||| |||||    
T  43714274 taagtcaacaaaacttccttttatggtaaaaattt 43714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 39751658 - 39751521
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||||||| | ||||||||| ||| |||||||||| |||||||||||||||||| ||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcattaaaaattgtttaattaatctataa 39751559  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||||||||||||||||||||||||||| |||||||    
T  39751558 ataagtcaacaaaacttccttttatggtaagaatttcc 39751521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 24261396 - 24261502
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaat 159  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||     
T  24261396 ggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaacccataaataagtcaacaaaacttccttttatgataag 24261495  T
Q  160 aatttcc 166  Q
    |||||||    
T  24261496 aatttcc 24261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 37479588 - 37479689
Alignment:
Q  50 ccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcctt 149  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  37479588 ccgggacactgattaaggataataaaaaaggaaattatatgttaattattgccttgaaaattgtttaattaatctataaataaatcaacaaaacttcctt 37479687  T
Q  150 tt 151  Q
    ||    
T  37479688 tt 37479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 42655431 - 42655277
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaata 160  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| |    
T  42655431 gttaaggataatgaaaaggtaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcattttataataaga 42655332  T
Q  161 atttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||        ||||| |||||| ||| ||||| ||||||||||||||||||||    
T  42655331 atttcc-tttttttgtatgcttaaccggtg-ccctggggcaccggttagcatgaccc 42655277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 39206217 - 39206322
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaata 160  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| |    
T  39206217 gttaaggataataaaaagggaaattatatgttaattattgtattgaaaattatttaattaattcataaataagtcaacaaaactttcttttatgataaaa 39206316  T
Q  161 atttcc 166  Q
    ||||||    
T  39206317 atttcc 39206322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 2490297 - 2490147
Alignment:
Q  76 aaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataatttccnnnnnnnng 175  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||        |    
T  2490297 aaagggaaatatatattaattattgcattgaaaattgtttaattaattcataaataagtcaacaaaacttcattttatggtaaaaatttcc-tttttttg 2490199  T
Q  176 tatgtttaacccgtgcccctgaggcaccggttagcatgaccccttattttaat 228  Q
    |||| |||||||||||| | | ||||||||||||||||| |||||||||||||    
T  2490198 tatgcttaacccgtgcctcgggggcaccggttagcatga-cccttattttaat 2490147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 27440939 - 27441037
Alignment:
Q  219 ttattttaatgcattaatccatgcaaatggtggataattattttagaagatccnnnnnnnttctatgcgaataaaacgtattgtttagtgctgaatttt 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||||||||||||    
T  27440939 ttattttaatgcattaatccatgcaaatggtggataattattttagaagatccaaaaaaattctatacgaatcaaacgtattgtttagtgctgaatttt 27441037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 2270569 - 2270659
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataattt 164  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||    
T  2270569 aaaaagggaattatatgttaattattgtattgaaaattgtttaattaatgcataaataagtcaataaaacttccttttattgtaagaattt 2270659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 4811555 - 4811689
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||||||||||||| || |||  |  || ||||||||||| ||| |||||||| |||||||||  |||||||||||||||||||||| |||||||| |||    
T  4811555 aagggaaatgctaatcggtgcctcaagggcaccggttaagaatactaaaaaagaaaattatatagtaattattgcattgaaaattgtataattaattcat 4811654  T
Q  127 aaataagtcaacaaaacttccttttatggtaataa 161  Q
    |||||| ||||||||  ||| ||||||||||||||    
T  4811655 aaataaatcaacaaagtttctttttatggtaataa 4811689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 4537934 - 4537744
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcc 124  Q
    ||||||||||||||||||| |||  ||||| ||| |||||||||| |||||| ||||||||||||  || ||| ||||||| ||||| | ||||||||      
T  4537934 ttaagggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaataggaaattatatagtagttaatgcattg-aaattatgtaattaattg 4537837  T
Q  125 ataaataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||  ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| |||||||||||||||| |||||    
T  4537836 ataataaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccc 4537744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 34228682 - 34228868
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| || ||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| ||||||| ||||||||  ||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattgataa 34228779  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| || |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  34228780 taaagtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 13643010 - 13643144
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| |||||||||||| ||| |||||| ||| |||||||||||  ||||| |||||||||||  || ||| |||||||||| || | ||||||||  ||    
T  13643010 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaa-ggaaattatatagtagttaatgcattgaaa-ttatgtaattaatttat 13643107  T
Q  127 aaataagtcaacaaaacttccttttatggtaataatt 163  Q
    ||  ||||||| |||| ||||||||||||||||||||    
T  13643108 aataaagtcaaaaaaaattccttttatggtaataatt 13643144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 13743435 - 13743569
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| |||||||||||| ||| |||||| ||| |||||||||||  ||||| |||||||||||  || ||| |||||||||| || | ||||||||  ||    
T  13743435 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaa-ggaaattatatagtagttaatgcattgaaa-ttatgtaattaatttat 13743532  T
Q  127 aaataagtcaacaaaacttccttttatggtaataatt 163  Q
    ||  ||||||| |||| ||||||||||||||||||||    
T  13743533 aataaagtcaaaaaaaattccttttatggtaataatt 13743569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 27988687 - 27988552
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| |||  ||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttat 27988590  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  ||||||||||||||||||||    
T  27988589 aataaagtcaaaaacagtttccttttatggtaataatt 27988552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 28045989 - 28045854
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| |||  ||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttat 28045892  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  ||||||||||||||||||||    
T  28045891 aataaagtcaaaaacagtttccttttatggtaataatt 28045854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 2805446 - 2805267
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||||||| |||||  ||| |||||||||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||| | ||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaacctataa 2805349  T
Q  129 ataagtcaaca-aaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagc 210  Q
      ||||||| |  |  |||||||||||||||||| ||||        ||||| |||||| ||||||| |||||||||||||||    
T  2805348 taaagtcaaaagcagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccggaggcaccggttagc 2805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 16888728 - 16888597
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||| ||| |||||| ||| ||||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||     
T  16888728 ggaaatgctaaccggtgcccccggg-cacaggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataat 16888632  T
Q  130 taagtcaacaaaactt-ccttttatggtaataatt 163  Q
     ||||||| || | || ||||||||||||||||||    
T  16888631 aaagtcaaaaacagtttccttttatggtaataatt 16888597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 33357318 - 33357182
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||||||| | ||| |||||  ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |    
T  33357318 taagggaaatgctaactggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattta 33357221  T
Q  126 taaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||||| || |  ||||||||||||||||||||    
T  33357220 taataaagtcaaaaacagtttccttttatggtaataatt 33357182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 20831737 - 20831661
Alignment:
Q  31 gaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||| ||| |||||||||| |||||||||| || ||||||||||||||||  || ||| ||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaaa 20831661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 22199240 - 22199333
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttat 153  Q
    |||||||| || |||||| |||| ||||||  ||| ||||||||||||| || | |||||||| ||||||||||| ||||||  ||||||||||    
T  22199240 ggttaaggttactaaaaatggaatttatatagtaactattgcattgaaatttatgtaattaattcataaataagttaacaaagtttccttttat 22199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 33899177 - 33899108
Alignment:
Q  49 cccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaat 118  Q
    |||||| ||| ||||||| || |||||||||||||||||||  ||||||||| |||||||||||| ||||    
T  33899177 cccggggcactggttaagaatgataaaaaaggaaattatataataattattgaattgaaaattgtgtaat 33899108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 30675767 - 30675625
Alignment:
Q  20 ttatcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaatt 119  Q
    |||| ||| ||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| |||||    
T  30675767 ttattttatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaatt 30675670  T
Q  120 aatccataaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |||  ||||  | ||||| || |  ||||||||||||||||||||    
T  30675669 aatttataataatgtcaaaaacagtttccttttatggtaataatt 30675625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 2490379 - 2490320
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaat 84  Q
    ||||||||||||||||||| |||  ||||| ||| |||||||||||||||||| ||||||    
T  2490379 ttaagggaaatgctaaccggtgcctccggggcacaggttaaggataataaaaagggaaat 2490320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 11112638 - 11112730
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||||| | |||  ||||||||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  11112638 agggaaatgctaactggtgcatccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 11112730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 168464 - 168599
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| |||  ||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  168464 aagggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttat 168561  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  | ||||| || |  ||||||||||||||||||||    
T  168562 aataatgtcaaaaacagtttccttttatggtaataatt 168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 37373206 - 37373296
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||| | ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  37373206 gggaaatgctaaccggtgcccccgg-acactggttaaggata-tgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaat 37373296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 37714057 - 37713989
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||| |||||||| |||||| ||  || ||||||||||||||||| | ||||||||| |||||    
T  37714057 gttaaggatactaaaaaagaaaattacataatagttattgcattgaaaattatgtaattaatctataaa 37713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 4648189 - 4648285
Alignment:
Q  23 tcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||||||||| || ||||||| ||| | |||||||| || ||||||||||||||||  || ||| | ||||| ||||||| ||||||||    
T  4648189 tcttaagggaaatgctaaccggtg-tcccggggcactgattaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtgtaattaat 4648285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 9063240 - 9063160
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    |||||||||||||||||| || ||||||  ||| ||||||||||| | ||||||||||||||||  || ||| ||||||||||    
T  9063240 taagggaaatgctaaccggtg-tcccggagcactggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa 9063160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 9934557 - 9934599
Alignment:
Q  175 gtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |||||||||||||||||||| | |||||||||||||| |||||    
T  9934557 gtatgtttaacccgtgccccgggggcaccggttagcaggaccc 9934599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 33124649 - 33124591
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaat 118  Q
    ||||||||||| | ||||||||| ||||||  || ||||||||||||||||||| ||||    
T  33124649 ggttaaggatacttaaaaaggaagttatatagtagttattgcattgaaaattgtgtaat 33124591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 29444328 - 29444193
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    |||| ||||| |||||| |||||||||| ||| | ||||||||| | ||||||||||||||||  || |||  ||||||||| |||| ||||||||  ||    
T  29444328 aaggaaaatgttaaccggtgctcccggggcactgattaaggata-tgaaaaaggaaattatatagtagttaacgcattgaaa-ttgtgtaattaatttat 29444231  T
Q  127 aaataagtcaacaaaacttc-cttttatggtaataatt 163  Q
    ||  ||||||| || | ||  |||||||||||||||||    
T  29444230 aataaagtcaaaaacagttttcttttatggtaataatt 29444193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16785083 - 16785145
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatat 89  Q
    ||||||||||||||||||| |||||| ||| ||| |||||||||| || ||||| ||||||||||    
T  16785083 ttaagggaaatgctaaccggtgctccaggg-cactggttaaggat-atgaaaaaagaaattatat 16785145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 16890639 - 16890533
Alignment:
Q  56 caccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaactt-ccttttatg 154  Q
    |||| |||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||  ||||||| || | || |||||||||    
T  16890639 caccagttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaattgataataaagtcaaaaacagtttccttttatg 16890542  T
Q  155 gtaataatt 163  Q
    |||||||||    
T  16890541 gtaataatt 16890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 36730444 - 36730577
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||| ||||||||| | ||| ||| ||||||  |||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  |||    
T  36730444 aggggaatgctaactggtgc-cccaggacactagttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttata 36730540  T
Q  128 aataagtcaacaaaactt-ccttttatggtaataatt 163  Q
    |  ||||||| || | || ||||||||||||||||||    
T  36730541 ataaagtcaaaaacagtttccttttatggtaataatt 36730577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 42449008 - 42449064
Alignment:
Q  73 aaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||| |||||||||||  || ||||| ||||||||||||| || ||||||||||||    
T  42449008 aaaaatggaaattatatagtagttattacattgaaaattgtgtagttaatccataaa 42449064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 509144 - 508987
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaata 160  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |    
T  509144 gttaaggataataaaaatggaaattatatgttaattattgaattgaaaattgtttaattaattcataaataagtcaacaaaactttcttttatggtaaaa 509045  T
Q  161 atttcc-nnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||         ||||| |||| | ||||||| ||||||||||||||||||||||    
T  509044 atttcctttttttttgtatgcttaaacggtgccccggaggcaccggttagcatgaccc 508987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 51665870 - 51665715
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaata 160  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |    
T  51665870 gttaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaattcataaataagtcaacgaaacttcattttatggtaaga 51665771  T
Q  161 atttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||||||        ||||| |||||||||||||| | | ||||||||||||||||||    
T  51665770 atttccttttttctgtatgcttaacccgtgcccc-gggacaccggttagcatgaccc 51665715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 53163794 - 53163892
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaa 158  Q
    |||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53163794 ggttaaggataataaatagggaaattatatgttaattactggattgaaaattgtttaattaatccataaataagtcaacaaaactttcttttatggtaa 53163892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 31436313 - 31436393
Alignment:
Q  81 aaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataa 161  Q
    |||||||||  ||||||||||||| |||||||| |||||||| ||||||||||||||||||| || |||||||||||||||    
T  31436313 aaattatatagtaattattgcattaaaaattgtgtaattaattcataaataagtcaacaaaattttcttttatggtaataa 31436393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 49893330 - 49893464
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||| |||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatctata 49893427  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |  ||||||| || |  ||||||||||||||||||||    
T  49893428 ataaagtcaaaaacagtttccttttatggtaataatt 49893464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 12011681 - 12011744
Alignment:
Q  94 attattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggta 157  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  12011681 attagtgcattgaaaattggttaattaattcataaataagtcaacaaaactttcttttatggta 12011744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 26966528 - 26966595
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||| ||||||| ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  26966528 ttaaggatactaaaaaaagaaattatatagtagttattgcattgaaaattgtttaattaatccataaa 26966595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 46352632 - 46352820
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||| ||| |||||||||| || |||||||||||||||   || ||| ||||||| ||||||| ||||||||  ||    
T  46352632 aagggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatacagtagttaatgcattg-aaattgtgtaattaattgat 46352729  T
Q  127 aaataagtca-acaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    ||  |||||| | | |  |||||||||||||||||| ||||        ||||| |||||||||||||| |||||||||||||||| |||||    
T  46352730 aataaagtcagaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 46352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 10617469 - 10617284
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||||||| |||||| ||| ||||| |||| | ||||||||| ||||||||||||||||||  || ||| |||||| |||||||| ||||||||  ||||    
T  10617469 gggaaatgttaaccggtgcccccgg-acactgattaaggata-taaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaatttataa 10617373  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      ||||||| || || |||||||||||||||||| ||||        ||||| |||||||||||||| | |||||||||||||| |||||    
T  10617372 taaagtcaaaaacaatttccttttatggtaataa-ttcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggaccc 10617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 272219 - 272353
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  |||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttata 272316  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatt 163  Q
    |  ||||||| || |  ||||||||||||||||||||    
T  272317 ataaagtcaaaaatagtttccttttatggtaataatt 272353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 25743837 - 25743909
Alignment:
Q  57 accggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||| |||||||| |||||||| ||||||    
T  25743837 accgattaaggatactaaaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaattcataaa 25743909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 27644045 - 27644137
Alignment:
Q  74 aaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaataatttcc 166  Q
    |||||| |||||||||  |||||||| |||| |||||||| |||||||||| ||||||||||||||||| || ||||||| || |||| ||||    
T  27644045 aaaaagtaaattatatagtaattattacattaaaaattgtgtaattaatccttaaataagtcaacaaaattttcttttatcgtcataaattcc 27644137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 48725271 - 48725404
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| || ||| ||| ||||||||||| | ||||||||||||||||  |||||| ||||||| ||||||| ||||||||  ||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattgataa 48725368  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || |  ||||||||||||||||||||    
T  48725369 taaagtcaaaaacagtttccttttatggtaataatt 48725404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 27994486 - 27994387
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    |||||||| |||||||||| |||||| ||| ||||||||||| ||||||| |||||| |||  |||||| || | |||||||| | ||||||||||||||    
T  27994486 gggaaatgttaaccgatgcccccggggcactggttaaggatactaaaaaa-gaaattttatagtaattaatgtagtgaaaattatgtaattaatccataa 27994388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 39074419 - 39074604
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 39074516  T
Q  129 ataagtcaacaaaacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
      | ||||| | |  |||||||||||||||||| ||||        ||||| |||||| ||||||| | |||||||||||||| |||||    
T  39074517 taatgtcaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 39074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 34300804 - 34300689
Alignment:
Q  25 ttaagggaaatgctaaccgatg-ctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatc 123  Q
    |||||||||||| ||||||||| ||||  || ||| ||||||||||||||||||| |||||||||   || ||||| |||||||| |||| |||| |||     
T  34300804 ttaagggaaatgttaaccgatgtctccaagg-cactggttaaggataataaaaaatgaaattatacagtagttattacattgaaagttgtgtaatcaatt 34300706  T
Q  124 cataaataagtcaacaaa 141  Q
    |||||| |||||||||||    
T  34300705 cataaa-aagtcaacaaa 34300689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 52520679 - 52520814
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||  ||    
T  52520679 aagggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttat 52520776  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  | ||||| || |  ||||||||||||||||||||    
T  52520777 aataatgtcaaaaacagtttccttttatggtaataatt 52520814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 858586 - 858768
Alignment:
Q  26 taagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatcca 125  Q
    |||||||||||| ||||| ||| ||| |  |||  |||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  |    
T  858586 taagggaaatgcaaaccggtgcccccagtgcactagttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaattga 858683  T
Q  126 taaataagtcaacaaaactt-ccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagc 210  Q
    |||  ||||||| || | || |||||||||||||||||||||        ||||| |||||||||||||| | |||||||||||||    
T  858684 taataaagtcaaaaacagtttccttttatggtaataatttcc-ttttatggtatgcttaacccgtgccccgggggcaccggttagc 858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 41304004 - 41304139
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| |||  ||||| ||  ||||||||||| | ||||||||||||||||  |||||| ||||||| ||||||  ||||||||  |||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggata-tgaaaaaggaaattatatagtaattaatgcattg-aaattg--taattaattgata 41304099  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
    |  ||||||| || |  |||||||||||||||||||||||    
T  41304100 ataaagtcaaaaacagtttccttttatggtaataatttcc 41304139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 2505350 - 2505482
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||||| || |||  |||||| |||| | ||||||||||||||||  || ||| |||||||||| |||| |||||||| |||||    
T  2505350 gggaaatgctaaccgctgctcctgg-acattggttaaagata-tgaaaaaggaaattatatagtagttagtgcattgaaa-ttgtgtaattaattcataa 2505446  T
Q  129 ataagtcaacaaaactt-ccttttatggtaataatt 163  Q
      ||||||| || | || ||||||||||||||||||    
T  2505447 taaagtcaaaaatagtttccttttatggtaataatt 2505482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 13899036 - 13898979
Alignment:
Q  72 taaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||| |||||||||  ||||||||| |||||||||| | |||||||||||||||    
T  13899036 taaaaaagaaaattatatagtaattattgtattgaaaattttgtaattaatccataaa 13898979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 40614462 - 40614522
Alignment:
Q  62 ttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||| |||||| |||||||||||  || ||||||||||||||||||| ||| ||||    
T  40614462 ttaaggatactaaaaagggaaattatatagtagttattgcattgaaaattgtgtaactaat 40614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 50395742 - 50395616
Alignment:
Q  35 tgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagt 134  Q
    ||||||||| ||| |||||||||| ||||| ||||| | |||||| ||||||||   || ||| ||||| |||| |||| ||||||||  ||||  ||||    
T  50395742 tgctaaccggtgcccccgggacactggttagggata-tgaaaaagaaaattatacagtagttaatgcatagaaa-ttgtgtaattaattgataataaagt 50395645  T
Q  135 caacaaaacttccttttatggtaataatt 163  Q
    ||| | || ||||||||||||||||||||    
T  50395644 caaaacaatttccttttatggtaataatt 50395616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 4168183 - 4168316
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 128  Q
    ||||||||||||||| |||  |||||  || ||||||||||| ||||||||||||||||||  || ||| || |||| ||||||| ||||||||  ||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggata-taaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 4168280  T
Q  129 ataagtcaacaa-aacttccttttatggtaataatt 163  Q
      ||||||| || |  || |||||||||||||||||    
T  4168281 taaagtcaaaaacagttttcttttatggtaataatt 4168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 7468417 - 7468502
Alignment:
Q  33 aatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||||||||  || |||||||||| ||||||||| ||| ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  7468417 aatgctaaccg--gcccccgggacactggttaagga-aatgaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaat 7468502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 49340124 - 49340158
Alignment:
Q  95 ttattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||||||||||| |||||||||||||||    
T  49340124 ttattgcattgaaaattgtgtaattaatccataaa 49340158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 11308398 - 11308318
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaa 108  Q
    ||||||||||||||||| || | ||||||||| | ||||||||  | ||||||||||||||||  || ||| ||||||||||    
T  11308398 aagggaaatgctaaccggtgtttccgggacactgattaaggat-gtgaaaaaggaaattatataatagttaatgcattgaaa 11308318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 20923992 - 20924083
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||||||||||||| |||| ||||| ||| |||||||| | || ||||||||||||||||  || ||| | ||||| ||||||| ||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaattcattg-aaattgtgtaattaat 20924083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 2362801 - 2362860
Alignment:
Q  29 gggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatat 89  Q
    ||||||||||||||| |||||||||  ||  |||||||||| || ||||||||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggat-atgaaaaaggaaattatat 2362860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 18014670 - 18014808
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||| | ||| |||||| ||| | |||||||| || |||||| |||||||||  || ||| ||||||| ||||||| ||||||| | ||    
T  18014670 aagggaaatgctaactggtgcccccggggcactgattaaggat-atgaaaaagtaaattatatagtagttaatgcattg-aaattgtgtaattaaactat 18014767  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatttcc 166  Q
    ||  |||| || || |  ||||||||||| |||||||||||    
T  18014768 aataaagttaaaaacagtttccttttatgataataatttcc 18014808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 41554095 - 41553993
Alignment:
Q  60 ggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaactt-ccttttatggtaa 158  Q
    ||||||||||| | ||||||||||||||||  || ||| |||||||||| |||| ||||||||  ||||  ||||||| || | || |||||||||||||    
T  41554095 ggttaaggata-tgaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaa 41553998  T
Q  159 taatt 163  Q
    |||||    
T  41553997 taatt 41553993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 43786860 - 43786962
Alignment:
Q  18 atttatcttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaa 117  Q
    |||||| ||| ||||||||||||||| |||  ||||| ||| |||||| | | || ||||||||||||||||  || ||| ||||||| ||||||| |||    
T  43786860 atttattttatgggaaatgctaaccggtgcctccggggcactggttaatggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaa 43786957  T
Q  118 ttaat 122  Q
    |||||    
T  43786958 ttaat 43786962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 53872 - 53685
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccata 127  Q
    |||||||||||||||| ||| |||||| ||| |||||||| | || ||||||||||||||||  || ||| |||||| |||||||| ||||||||  ||     
T  53872 agggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaatttatc 53775  T
Q  128 aataagtcaacaa-aacttccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
    |  | ||||| || |  |||||||||||||||||| ||||        ||||||||||||||| |||| | |||||||||||||| |||||    
T  53774 ataatgtcaaaaatagtttccttttatggtaataa-ttcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 53685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 22959 - 23094
Alignment:
Q  27 aagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 126  Q
    ||||||||||||||||| ||| |||||  ||| |||||||||| || ||||||||||||||||  |||||| | ||||| ||||||| ||||||||  ||    
T  22959 aagggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtaattaatacattg-aaattgtgtaattaatttat 23056  T
Q  127 aaataagtcaacaa-aacttccttttatggtaataatt 163  Q
    ||  ||||||| || |  ||||||||||| ||||||||    
T  23057 aataaagtcaaaaacagtttccttttatgttaataatt 23094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 66430 - 66498
Alignment:
Q  61 gttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    ||||||||||  |||||| ||| ||||||  || ||||||||||||||||||| |||||||||||||||    
T  66430 gttaaggatacgaaaaaatgaagttatataatagttattgcattgaaaattgtgtaattaatccataaa 66498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 116200 - 116295
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    |||||| |||||||||||| ||| |||||| ||| |||||| ||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  116200 ttaaggaaaatgctaaccggtgcccccggggcacaggttaaagat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 6295 - 6110
Alignment:
Q  30 ggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 129  Q
    |||||||||||||| ||| || ||| ||| ||||||||||| | |||||||||| |||||  || ||| ||||||| || |||| |||||||   ||||     
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggata-tgaaaaaggaaactatatagtagttaatgcattggaa-ttgtgtaattaaattataat 6198  T
Q  130 taagtcaacaaaactt-ccttttatggtaataatttccnnnnnnnngtatgtttaacccgtgcccctgaggcaccggttagcatgaccc 217  Q
     ||||||| || | || |||||||||||||||||  ||        |||||||||||||||||||| | |||||||||||||| |||||    
T  6197 aaagtcaaaaacagtttccttttatggtaataatc-cccttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 11155 - 11066
Alignment:
Q  28 agggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaa 121  Q
    |||||||||||||| | ||| ||  |||||| ||||||||||| | |||||||||||||||| ||| ||| ||||||| ||||||| |||||||    
T  11155 agggaaatgctaactggtgcccc--ggacactggttaaggata-tgaaaaaggaaattatatattagttaatgcattg-aaattgtgtaattaa 11066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 53507 - 53441
Alignment:
Q  54 gacaccggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaat 122  Q
    ||||| ||||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| ||||||||    
T  53507 gacactggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaat 53441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 68480 - 68417
Alignment:
Q  25 ttaagggaaatgctaaccgatgctcccgggacaccggttaaggataataaaaaaggaaattatat 89  Q
    ||||||||||||||||| | ||| |||||| ||| |||||||||| || ||||| ||||||||||    
T  68480 ttaagggaaatgctaactggtgcccccggggcactggttaaggat-atgaaaaatgaaattatat 68417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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