View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7350_low_25 (Length: 362)
Name: NF7350_low_25
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7350_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 2448991 - 2448658
Alignment:
| Q |
19 |
caagtgtctcaattggttagttaacttcagctaagatcaaattgatgaagcgtacttgagtttaacctctaattgaaataatcattatagaatttgctta |
118 |
Q |
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| T |
2448991 |
caagtgtctcagctggttagttaacttcagctaagatcaaattgatgaagcgtacttgagtttaacctctaattgaaataatcattatagaatttgctta |
2448892 |
T |
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| Q |
119 |
catctatctccagattgttagcatgttatttcttttaaatattgatttaaggatttcaatctttgtttactcatgaattttacgatataggcgatgattg |
218 |
Q |
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| T |
2448891 |
catctatctccagattgttagcatgttatttcttttaaatattgatttaaggatttcaatctttgtttactcatgaattttacgatataggcgatgattg |
2448792 |
T |
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| Q |
219 |
cattgctattaaaggtgggtcacaattcatcaatgtcactcaagttacatgcggacctgggactcatggcattaggtatgtcacaatactctaacatgta |
318 |
Q |
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| T |
2448791 |
cattgctattaaaggtgggtcacaattcatcaatgtcactcaagttacatgtggacctgggactcatggcattaggtatgtcaaaatactctaacatgta |
2448692 |
T |
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| Q |
319 |
aacatcaagcttctatgcacaatttatctctctg |
352 |
Q |
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||||||||||||||||||| |||||||||||||| |
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| T |
2448691 |
aacatcaagcttctatgcataatttatctctctg |
2448658 |
T |
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