View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7350_low_45 (Length: 253)
Name: NF7350_low_45
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7350_low_45 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 32473875 - 32474097
Alignment:
| Q |
10 |
aatgtaaatttattccatcaaaataatctttcctgagtgttgcctaccgcaatcgttacttccacagtcgtgtgcgtgtatggtcaattcactgaactga |
109 |
Q |
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| T |
32473875 |
aatgttaatttattccatcaaaataatatttcctgagtgttgcctaccgcaatcgttacttccacagtcgtgtg----tatggtcaattcactgaactga |
32473970 |
T |
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| Q |
110 |
gttctcaattttccattgtaacgatggagttcacagttgaagcggtgggaaacatagacaactgtttcgtatctctccccttacctctaatccaaactct |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32473971 |
gttctcaattttccattgtaacgatggagttcacagttgaagcggtgggaaacatagacaactgtttcgtatctctccccttacctctaatccaaactct |
32474070 |
T |
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| Q |
210 |
tcaatccacacgaggctcatctcttct |
236 |
Q |
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|||||||| ||||| |||||||||||| |
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| T |
32474071 |
tcaatccatacgagactcatctcttct |
32474097 |
T |
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