View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7350_low_46 (Length: 251)

Name: NF7350_low_46
Description: NF7350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7350_low_46
NF7350_low_46
[»] chr8 (82 HSPs)
chr8 (1-234)||(471046-471276)
chr8 (11-222)||(29617168-29617377)
chr8 (1-219)||(5333405-5333621)
chr8 (11-233)||(15344295-15344514)
chr8 (11-233)||(15433360-15433579)
chr8 (11-233)||(15524664-15524883)
chr8 (1-233)||(18890582-18890816)
chr8 (11-227)||(1239286-1239499)
chr8 (1-198)||(8443427-8443624)
chr8 (11-233)||(1236580-1236799)
chr8 (1-199)||(39657426-39657628)
chr8 (58-233)||(41896550-41896723)
chr8 (67-233)||(42046263-42046427)
chr8 (38-223)||(14916081-14916263)
chr8 (1-233)||(23230622-23230849)
chr8 (66-233)||(14585718-14585883)
chr8 (13-223)||(8826200-8826407)
chr8 (40-233)||(7677166-7677357)
chr8 (39-233)||(27110348-27110540)
chr8 (39-233)||(17693496-17693689)
chr8 (66-233)||(43833879-43834043)
chr8 (1-227)||(16247112-16247333)
chr8 (39-223)||(20553134-20553316)
chr8 (39-219)||(33347418-33347595)
chr8 (1-187)||(34609809-34609998)
chr8 (35-233)||(21237800-21237994)
chr8 (1-192)||(24099172-24099368)
chr8 (108-233)||(8867888-8868014)
chr8 (11-172)||(3240366-3240527)
chr8 (1-233)||(3673420-3673647)
chr8 (103-233)||(7198078-7198206)
chr8 (1-233)||(7883124-7883351)
chr8 (1-233)||(10377668-10377895)
chr8 (1-225)||(40618964-40619183)
chr8 (51-192)||(26469068-26469209)
chr8 (40-223)||(20559637-20559818)
chr8 (40-223)||(20571199-20571380)
chr8 (78-233)||(45445694-45445847)
chr8 (39-233)||(28897723-28897915)
chr8 (18-154)||(8981155-8981292)
chr8 (39-227)||(33214560-33214746)
chr8 (73-233)||(37971331-37971489)
chr8 (66-233)||(5046794-5046959)
chr8 (38-233)||(40211185-40211378)
chr8 (3-192)||(14544825-14545011)
chr8 (39-233)||(31013491-31013683)
chr8 (11-200)||(25190979-25191167)
chr8 (40-227)||(9637298-9637483)
chr8 (78-233)||(16928640-16928793)
chr8 (74-222)||(28086706-28086853)
chr8 (108-233)||(30568204-30568327)
chr8 (98-178)||(10331164-10331244)
chr8 (52-143)||(19444035-19444126)
chr8 (11-227)||(27498255-27498464)
chr8 (109-199)||(24186576-24186666)
chr8 (78-199)||(24419080-24419202)
chr8 (13-89)||(35580470-35580546)
chr8 (134-199)||(18846381-18846446)
chr8 (13-90)||(26469232-26469309)
chr8 (142-199)||(41684499-41684556)
chr8 (108-160)||(27747051-27747103)
chr8 (144-231)||(35283248-35283333)
chr8 (108-222)||(29939383-29939495)
chr8 (1-87)||(34493041-34493127)
chr8 (168-233)||(41060146-41060209)
chr8 (13-90)||(44099928-44100005)
chr8 (13-89)||(4808977-4809053)
chr8 (11-183)||(31634213-31634384)
chr8 (13-84)||(11196902-11196973)
chr8 (108-242)||(12184372-12184504)
chr8 (108-242)||(12428800-12428932)
chr8 (11-90)||(27747107-27747186)
chr8 (108-154)||(28239927-28239973)
chr8 (11-92)||(17427208-17427289)
chr8 (11-64)||(24853458-24853511)
chr8 (44-81)||(37663064-37663101)
chr8 (13-89)||(9619352-9619428)
chr8 (13-89)||(11464184-11464260)
chr8 (108-160)||(17427154-17427206)
chr8 (172-223)||(25238486-25238535)
chr8 (36-124)||(39450552-39450640)
chr8 (13-89)||(43192341-43192417)
[»] chr4 (97 HSPs)
chr4 (1-224)||(52944305-52944526)
chr4 (2-191)||(33332494-33332685)
chr4 (1-192)||(51888135-51888326)
chr4 (15-199)||(9048672-9048856)
chr4 (1-233)||(36194699-36194932)
chr4 (1-227)||(10496332-10496553)
chr4 (1-233)||(31891172-31891406)
chr4 (15-233)||(36161719-36161935)
chr4 (36-233)||(21662466-21662661)
chr4 (36-233)||(21671230-21671425)
chr4 (11-200)||(22038718-22038907)
chr4 (11-233)||(27651944-27652167)
chr4 (1-192)||(28857396-28857586)
chr4 (39-223)||(54021892-54022073)
chr4 (11-212)||(55227982-55228181)
chr4 (1-227)||(6155114-6155340)
chr4 (1-181)||(9643382-9643562)
chr4 (58-233)||(18935833-18936006)
chr4 (98-233)||(47320297-47320430)
chr4 (39-233)||(17949209-17949401)
chr4 (39-233)||(17953061-17953253)
chr4 (1-233)||(21686127-21686353)
chr4 (61-198)||(1621427-1621559)
chr4 (16-191)||(2069505-2069680)
chr4 (1-233)||(22611180-22611407)
chr4 (1-233)||(56040531-56040758)
chr4 (78-233)||(2520850-2521003)
chr4 (11-233)||(9713916-9714134)
chr4 (1-199)||(36204296-36204500)
chr4 (11-233)||(43853446-43853667)
chr4 (40-192)||(12199617-12199769)
chr4 (11-115)||(18048887-18048991)
chr4 (34-233)||(37465510-37465706)
chr4 (39-199)||(52060840-52061000)
chr4 (1-233)||(13634112-13634339)
chr4 (1-233)||(19853397-19853624)
chr4 (1-233)||(32766511-32766738)
chr4 (2-184)||(22300844-22301026)
chr4 (38-199)||(10258813-10258974)
chr4 (11-191)||(31359671-31359852)
chr4 (11-233)||(53444125-53444342)
chr4 (73-233)||(53811094-53811252)
chr4 (37-211)||(48351093-48351265)
chr4 (1-199)||(4142669-4142867)
chr4 (108-233)||(33921155-33921278)
chr4 (1-177)||(35395619-35395785)
chr4 (108-227)||(45418613-45418730)
chr4 (1-233)||(35348304-35348531)
chr4 (116-233)||(43510305-43510420)
chr4 (1-199)||(8670482-8670677)
chr4 (68-233)||(47158286-47158449)
chr4 (1-233)||(52933834-52934059)
chr4 (73-199)||(24098984-24099110)
chr4 (68-233)||(29960834-29960997)
chr4 (5-227)||(37030262-37030479)
chr4 (78-191)||(38166155-38166267)
chr4 (39-233)||(9178385-9178577)
chr4 (108-188)||(36700377-36700457)
chr4 (1-199)||(56156559-56156754)
chr4 (92-199)||(9145808-9145914)
chr4 (120-221)||(29120276-29120375)
chr4 (98-223)||(42032424-42032546)
chr4 (35-132)||(4937861-4937958)
chr4 (108-199)||(21554707-21554798)
chr4 (108-233)||(36184632-36184755)
chr4 (14-72)||(52204375-52204433)
chr4 (155-223)||(22305516-22305582)
chr4 (60-233)||(26090795-26090970)
chr4 (1-88)||(37683884-37683972)
chr4 (131-233)||(7008874-7008972)
chr4 (127-233)||(44596780-44596884)
chr4 (112-233)||(43095733-43095852)
chr4 (13-90)||(868180-868257)
chr4 (108-233)||(10389619-10389744)
chr4 (13-85)||(10389753-10389825)
chr4 (13-89)||(34024433-34024508)
chr4 (13-89)||(43154009-43154085)
chr4 (147-233)||(52978884-52978968)
chr4 (11-88)||(3336152-3336230)
chr4 (39-89)||(5119371-5119421)
chr4 (108-154)||(12265553-12265599)
chr4 (11-89)||(18138908-18138986)
chr4 (36-224)||(22806571-22806751)
chr4 (36-90)||(28834241-28834295)
chr4 (164-233)||(37684014-37684081)
chr4 (11-89)||(49126121-49126199)
chr4 (11-88)||(2624512-2624589)
chr4 (173-233)||(11299895-11299953)
chr4 (13-58)||(43353584-43353629)
chr4 (13-90)||(53616644-53616721)
chr4 (13-89)||(4643876-4643952)
chr4 (172-219)||(4821080-4821125)
chr4 (13-89)||(9283929-9284005)
chr4 (13-89)||(25273901-25273977)
chr4 (108-183)||(34024352-34024428)
chr4 (13-89)||(43444411-43444487)
chr4 (13-89)||(47417680-47417756)
[»] chr1 (84 HSPs)
chr1 (11-233)||(24582938-24583157)
chr1 (1-233)||(47132880-47133110)
chr1 (1-233)||(48750158-48750392)
chr1 (11-233)||(49626901-49627120)
chr1 (35-187)||(16262872-16263024)
chr1 (1-233)||(5983816-5984043)
chr1 (11-233)||(44543260-44543479)
chr1 (11-233)||(19060897-19061116)
chr1 (1-233)||(14872620-14872846)
chr1 (1-233)||(21947503-21947730)
chr1 (11-233)||(34412977-34413199)
chr1 (66-233)||(36775595-36775760)
chr1 (61-200)||(37720065-37720204)
chr1 (40-233)||(44915655-44915846)
chr1 (3-192)||(41994406-41994595)
chr1 (2-224)||(12635148-12635368)
chr1 (52-232)||(3228297-3228475)
chr1 (55-224)||(18939351-18939518)
chr1 (1-199)||(7337580-7337775)
chr1 (92-226)||(25564066-25564198)
chr1 (41-232)||(45789558-45789747)
chr1 (1-233)||(35484276-35484503)
chr1 (1-199)||(16161811-16162003)
chr1 (110-233)||(31984247-31984368)
chr1 (5-233)||(34878163-34878386)
chr1 (1-233)||(7836681-7836908)
chr1 (1-233)||(45415538-45415765)
chr1 (92-190)||(24597250-24597348)
chr1 (109-233)||(31317821-31317943)
chr1 (41-233)||(49648760-49648949)
chr1 (9-189)||(43412359-43412539)
chr1 (13-192)||(9341716-9341894)
chr1 (18-224)||(6217717-6217925)
chr1 (3-187)||(27580057-27580238)
chr1 (1-199)||(1742261-1742454)
chr1 (1-233)||(10776346-10776573)
chr1 (39-233)||(23291527-23291719)
chr1 (39-224)||(31919003-31919187)
chr1 (153-226)||(14489401-14489472)
chr1 (108-233)||(15431551-15431674)
chr1 (156-233)||(24583278-24583353)
chr1 (1-123)||(34528707-34528829)
chr1 (110-191)||(15492373-15492454)
chr1 (98-199)||(32679058-32679159)
chr1 (73-227)||(32395047-32395199)
chr1 (66-196)||(32873784-32873914)
chr1 (11-89)||(39927549-39927627)
chr1 (14-191)||(31692392-31692568)
chr1 (78-199)||(50616592-50616713)
chr1 (78-199)||(50624419-50624540)
chr1 (40-183)||(51916599-51916737)
chr1 (108-192)||(8211835-8211918)
chr1 (120-199)||(4413210-4413289)
chr1 (108-191)||(13075580-13075663)
chr1 (108-233)||(16989455-16989578)
chr1 (5-153)||(21686857-21687002)
chr1 (112-178)||(26535437-26535503)
chr1 (141-233)||(11462367-11462457)
chr1 (78-222)||(39888236-39888378)
chr1 (108-183)||(50166013-50166089)
chr1 (13-89)||(51871873-51871949)
chr1 (18-160)||(1602084-1602225)
chr1 (11-121)||(30506167-30506276)
chr1 (164-233)||(34529214-34529281)
chr1 (11-89)||(48365760-48365838)
chr1 (172-233)||(51373743-51373802)
chr1 (108-183)||(14545608-14545684)
chr1 (13-89)||(35584613-35584689)
chr1 (108-160)||(39987480-39987532)
chr1 (110-233)||(49504480-49504601)
chr1 (108-199)||(13144729-13144820)
chr1 (39-130)||(27456555-27456646)
chr1 (13-64)||(27872748-27872799)
chr1 (11-90)||(44637429-44637508)
chr1 (15-89)||(39987401-39987475)
chr1 (176-233)||(46399122-46399177)
chr1 (36-89)||(799813-799866)
chr1 (36-89)||(7312100-7312153)
chr1 (11-104)||(40163509-40163602)
chr1 (116-223)||(5856001-5856106)
chr1 (13-89)||(30879086-30879161)
chr1 (127-187)||(35461978-35462038)
chr1 (168-227)||(50377467-50377524)
chr1 (13-89)||(51868640-51868716)
[»] chr2 (94 HSPs)
chr2 (1-233)||(10929648-10929879)
chr2 (66-233)||(10237102-10237267)
chr2 (58-233)||(14955570-14955743)
chr2 (11-233)||(32448502-32448724)
chr2 (1-233)||(4904031-4904258)
chr2 (11-233)||(17249033-17249252)
chr2 (39-233)||(25508954-25509146)
chr2 (36-226)||(23933512-23933700)
chr2 (58-233)||(3308986-3309159)
chr2 (1-199)||(29574546-29574744)
chr2 (11-227)||(37416704-37416918)
chr2 (11-233)||(24461434-24461657)
chr2 (11-233)||(28533840-28534060)
chr2 (78-233)||(1421737-1421890)
chr2 (45-192)||(19595828-19595975)
chr2 (39-223)||(17151445-17151628)
chr2 (14-211)||(4264472-4264664)
chr2 (38-233)||(16375960-16376153)
chr2 (13-224)||(34128579-34128788)
chr2 (44-233)||(12554067-12554254)
chr2 (40-227)||(30399921-30400112)
chr2 (1-230)||(37876495-37876719)
chr2 (1-233)||(5427755-5427981)
chr2 (1-233)||(18763455-18763682)
chr2 (40-242)||(19028791-19028991)
chr2 (108-233)||(4778844-4778967)
chr2 (11-233)||(6358767-6358979)
chr2 (1-233)||(37994263-37994498)
chr2 (70-227)||(41694674-41694829)
chr2 (1-233)||(7677759-7677986)
chr2 (16-192)||(6436609-6436782)
chr2 (3-199)||(31128698-31128891)
chr2 (39-233)||(18107636-18107825)
chr2 (51-199)||(33760111-33760259)
chr2 (78-233)||(33923766-33923919)
chr2 (66-199)||(12647030-12647160)
chr2 (51-233)||(33585621-33585801)
chr2 (1-233)||(38445153-38445380)
chr2 (73-199)||(31210525-31210651)
chr2 (41-233)||(8809304-8809493)
chr2 (42-233)||(29173603-29173794)
chr2 (39-199)||(1415579-1415739)
chr2 (127-233)||(7646588-7646692)
chr2 (108-226)||(12677344-12677459)
chr2 (39-142)||(28871763-28871866)
chr2 (108-199)||(29279488-29279579)
chr2 (116-233)||(9169144-9169259)
chr2 (57-199)||(14423365-14423507)
chr2 (1-197)||(36943041-36943234)
chr2 (139-226)||(21612360-21612444)
chr2 (108-199)||(17994648-17994739)
chr2 (108-233)||(19062233-19062361)
chr2 (11-118)||(19597873-19597980)
chr2 (108-233)||(31788547-31788670)
chr2 (1-227)||(43397010-43397232)
chr2 (33-118)||(11812699-11812784)
chr2 (11-89)||(459269-459347)
chr2 (108-233)||(27097293-27097415)
chr2 (108-233)||(36691965-36692088)
chr2 (110-199)||(4041512-4041601)
chr2 (51-136)||(36175477-36175562)
chr2 (11-88)||(37614121-37614198)
chr2 (13-88)||(9418426-9418501)
chr2 (168-233)||(280948-281012)
chr2 (108-224)||(7604267-7604381)
chr2 (1-70)||(12647967-12648036)
chr2 (119-224)||(17319423-17319527)
chr2 (108-233)||(2808337-2808462)
chr2 (1-191)||(7448234-7448421)
chr2 (13-89)||(9986337-9986413)
chr2 (158-233)||(19597981-19598053)
chr2 (39-159)||(35220347-35220467)
chr2 (13-88)||(30420688-30420763)
chr2 (12-187)||(32092247-32092422)
chr2 (109-184)||(38293641-38293716)
chr2 (139-224)||(4100459-4100541)
chr2 (39-199)||(11985151-11985308)
chr2 (11-88)||(28227709-28227786)
chr2 (11-108)||(37628697-37628793)
chr2 (37-158)||(41327523-41327644)
chr2 (13-89)||(3269106-3269182)
chr2 (13-89)||(3269665-3269741)
chr2 (13-89)||(3270224-3270300)
chr2 (108-144)||(3725271-3725307)
chr2 (13-89)||(6173642-6173718)
chr2 (108-183)||(6173723-6173799)
chr2 (13-85)||(7015710-7015782)
chr2 (13-89)||(8805876-8805952)
chr2 (3-47)||(14416157-14416201)
chr2 (13-89)||(20047077-20047153)
chr2 (13-89)||(26025405-26025481)
chr2 (13-89)||(27249146-27249222)
chr2 (13-45)||(38293559-38293591)
chr2 (108-192)||(39310778-39310861)
[»] chr5 (54 HSPs)
chr5 (1-233)||(28540791-28541025)
chr5 (11-233)||(14211206-14211430)
chr5 (15-219)||(35920895-35921097)
chr5 (11-227)||(8088103-8088316)
chr5 (58-233)||(2979191-2979364)
chr5 (39-233)||(10722772-10722964)
chr5 (79-233)||(39567321-39567473)
chr5 (1-233)||(13007205-13007432)
chr5 (1-233)||(24229669-24229896)
chr5 (1-233)||(14726346-14726573)
chr5 (1-233)||(38597773-38598000)
chr5 (51-233)||(41630525-41630705)
chr5 (11-233)||(10332432-10332653)
chr5 (39-233)||(26877994-26878185)
chr5 (58-227)||(19103358-19103525)
chr5 (40-233)||(34945405-34945596)
chr5 (11-233)||(25980144-25980360)
chr5 (78-233)||(6216948-6217102)
chr5 (1-233)||(37985998-37986225)
chr5 (40-233)||(16758552-16758742)
chr5 (119-222)||(14082292-14082393)
chr5 (108-233)||(15571566-15571690)
chr5 (1-199)||(19120886-19121083)
chr5 (1-211)||(7930153-7930358)
chr5 (1-227)||(9113616-9113837)
chr5 (39-199)||(38007369-38007529)
chr5 (1-233)||(6012023-6012250)
chr5 (108-233)||(20257561-20257685)
chr5 (11-227)||(35850785-35850996)
chr5 (68-233)||(31391638-31391801)
chr5 (11-125)||(38110939-38111053)
chr5 (73-233)||(13421978-13422136)
chr5 (112-192)||(7036303-7036383)
chr5 (108-222)||(11192459-11192571)
chr5 (40-233)||(8096383-8096573)
chr5 (39-233)||(11976820-11977012)
chr5 (1-233)||(26825406-26825633)
chr5 (66-199)||(1409536-1409669)
chr5 (18-152)||(8984919-8985049)
chr5 (11-89)||(7613053-7613131)
chr5 (199-233)||(24874698-24874732)
chr5 (39-159)||(11073857-11073977)
chr5 (13-89)||(18677460-18677536)
chr5 (172-222)||(8514548-8514596)
chr5 (13-88)||(36344487-36344562)
chr5 (13-55)||(42579896-42579938)
chr5 (15-80)||(13468612-13468677)
chr5 (11-88)||(19349680-19349757)
chr5 (13-90)||(34881726-34881803)
chr5 (108-233)||(781477-781602)
chr5 (108-199)||(13468688-13468779)
chr5 (13-89)||(16981298-16981374)
chr5 (13-89)||(26578260-26578336)
chr5 (13-89)||(41184435-41184511)
[»] chr7 (71 HSPs)
chr7 (1-222)||(24069290-24069509)
chr7 (1-218)||(38880477-38880693)
chr7 (11-224)||(41553328-41553539)
chr7 (1-199)||(28476199-28476400)
chr7 (61-233)||(35132983-35133153)
chr7 (66-227)||(22742985-22743144)
chr7 (1-233)||(37837343-37837570)
chr7 (11-226)||(35665027-35665241)
chr7 (1-233)||(42978589-42978816)
chr7 (39-233)||(9977095-9977283)
chr7 (1-188)||(24350767-24350956)
chr7 (1-223)||(24770225-24770442)
chr7 (39-233)||(48316697-48316889)
chr7 (39-233)||(13796814-13797006)
chr7 (11-185)||(3224342-3224515)
chr7 (39-227)||(48061436-48061622)
chr7 (1-233)||(9450022-9450249)
chr7 (40-226)||(12141200-12141384)
chr7 (11-146)||(41553749-41553884)
chr7 (1-233)||(45349684-45349911)
chr7 (51-224)||(28044650-28044821)
chr7 (79-227)||(39171481-39171627)
chr7 (1-153)||(3394450-3394604)
chr7 (69-227)||(4999920-5000076)
chr7 (1-233)||(47590290-47590517)
chr7 (38-224)||(5348486-5348670)
chr7 (1-233)||(8001431-8001658)
chr7 (11-146)||(41554094-41554229)
chr7 (11-199)||(38798770-38798955)
chr7 (113-226)||(48930795-48930906)
chr7 (39-222)||(25255241-25255422)
chr7 (39-233)||(19404642-19404834)
chr7 (51-233)||(46700061-46700241)
chr7 (35-199)||(29617616-29617781)
chr7 (1-199)||(19296849-19297044)
chr7 (1-233)||(34899492-34899719)
chr7 (73-179)||(1769115-1769221)
chr7 (129-233)||(40993261-40993363)
chr7 (6-94)||(969469-969557)
chr7 (1-199)||(25287103-25287298)
chr7 (11-200)||(39229004-39229189)
chr7 (51-192)||(11343836-11343976)
chr7 (1-96)||(26623810-26623902)
chr7 (1-227)||(30756710-30756931)
chr7 (5-233)||(39328678-39328898)
chr7 (108-222)||(13592385-13592498)
chr7 (38-138)||(22087330-22087430)
chr7 (109-188)||(5078342-5078421)
chr7 (141-188)||(25068178-25068225)
chr7 (1-142)||(27997067-27997205)
chr7 (39-185)||(4530090-4530236)
chr7 (164-232)||(3398329-3398395)
chr7 (39-188)||(5792810-5792959)
chr7 (1-123)||(1749140-1749266)
chr7 (51-138)||(24610148-24610235)
chr7 (11-88)||(17611129-17611206)
chr7 (173-233)||(28407803-28407861)
chr7 (1-121)||(5775182-5775301)
chr7 (13-89)||(20116588-20116664)
chr7 (13-89)||(35667227-35667303)
chr7 (108-223)||(43369649-43369762)
chr7 (166-233)||(46822628-46822692)
chr7 (1-88)||(25068061-25068147)
chr7 (11-90)||(32521921-32522000)
chr7 (108-150)||(42067010-42067052)
chr7 (172-221)||(46244149-46244196)
chr7 (13-89)||(1448825-1448901)
chr7 (13-89)||(23786581-23786657)
chr7 (13-89)||(34773717-34773793)
chr7 (108-183)||(45198947-45199023)
chr7 (13-89)||(46339060-46339136)
[»] chr6 (53 HSPs)
chr6 (1-233)||(30493507-30493737)
chr6 (1-233)||(546001-546236)
chr6 (11-233)||(8102707-8102931)
chr6 (11-233)||(14801808-14802032)
chr6 (6-186)||(1933622-1933802)
chr6 (1-199)||(26588389-26588587)
chr6 (1-229)||(31296795-31297021)
chr6 (58-228)||(1523440-1523608)
chr6 (1-233)||(23128596-23128823)
chr6 (1-233)||(34185578-34185808)
chr6 (1-219)||(528249-528465)
chr6 (5-233)||(28981156-28981382)
chr6 (11-198)||(29255364-29255547)
chr6 (34-233)||(9380031-9380228)
chr6 (1-233)||(3913459-3913686)
chr6 (78-219)||(31852092-31852231)
chr6 (73-233)||(30776710-30776868)
chr6 (1-199)||(127648-127842)
chr6 (11-233)||(7976072-7976282)
chr6 (12-233)||(679095-679313)
chr6 (39-233)||(12170481-12170673)
chr6 (1-199)||(32191647-32191843)
chr6 (1-199)||(3355095-3355290)
chr6 (1-233)||(33053053-33053280)
chr6 (39-199)||(30894613-30894772)
chr6 (1-199)||(34018538-34018733)
chr6 (1-233)||(606182-606409)
chr6 (105-233)||(29743076-29743205)
chr6 (1-200)||(7515118-7515314)
chr6 (78-226)||(20225903-20226049)
chr6 (78-226)||(22119887-22120033)
chr6 (68-199)||(27097559-27097690)
chr6 (40-198)||(4010430-4010587)
chr6 (11-233)||(30608400-30608616)
chr6 (1-199)||(32327134-32327329)
chr6 (40-189)||(34222812-34222958)
chr6 (108-233)||(67886-68009)
chr6 (39-188)||(29319806-29319955)
chr6 (108-190)||(8266717-8266799)
chr6 (11-64)||(33543640-33543693)
chr6 (79-199)||(6957203-6957323)
chr6 (12-122)||(17346522-17346632)
chr6 (2-72)||(19164687-19164757)
chr6 (11-85)||(22571459-22571533)
chr6 (11-89)||(25337574-25337652)
chr6 (173-233)||(9341536-9341594)
chr6 (108-147)||(8196358-8196397)
chr6 (180-233)||(21426571-21426622)
chr6 (108-197)||(33543523-33543612)
chr6 (142-199)||(14846138-14846195)
chr6 (13-89)||(23947313-23947389)
chr6 (112-144)||(32174625-32174657)
chr6 (11-47)||(34489254-34489290)
[»] scaffold0347 (1 HSPs)
scaffold0347 (11-199)||(6014-6202)
[»] chr3 (97 HSPs)
chr3 (35-233)||(628808-629003)
chr3 (1-233)||(14859466-14859693)
chr3 (11-233)||(35175387-35175607)
chr3 (11-233)||(53807743-53807962)
chr3 (11-233)||(8914691-8914915)
chr3 (11-233)||(51923706-51923930)
chr3 (58-233)||(51303528-51303701)
chr3 (1-233)||(4821781-4822009)
chr3 (1-233)||(7546583-7546818)
chr3 (1-233)||(21289699-21289933)
chr3 (1-233)||(16235395-16235629)
chr3 (36-201)||(26716022-26716187)
chr3 (1-224)||(29922030-29922251)
chr3 (1-224)||(29971183-29971404)
chr3 (11-227)||(27706117-27706335)
chr3 (1-234)||(33579856-33580084)
chr3 (58-233)||(50194220-50194393)
chr3 (39-233)||(9797419-9797611)
chr3 (2-233)||(21533694-21533920)
chr3 (1-159)||(29239316-29239474)
chr3 (80-233)||(52115906-52116057)
chr3 (58-226)||(42460780-42460945)
chr3 (3-199)||(53508200-53508397)
chr3 (8-223)||(26739252-26739465)
chr3 (51-226)||(44805053-44805225)
chr3 (1-233)||(45568330-45568557)
chr3 (1-233)||(40487301-40487528)
chr3 (66-226)||(19339214-19339371)
chr3 (1-124)||(12947266-12947389)
chr3 (1-233)||(43488475-43488702)
chr3 (108-233)||(23799795-23799918)
chr3 (11-115)||(4396335-4396439)
chr3 (39-199)||(48199788-48199948)
chr3 (115-233)||(54149078-54149194)
chr3 (78-242)||(21431663-21431825)
chr3 (1-199)||(36461348-36461543)
chr3 (1-233)||(9998443-9998670)
chr3 (109-199)||(4169875-4169964)
chr3 (11-233)||(41818195-41818418)
chr3 (1-233)||(52923002-52923229)
chr3 (109-224)||(53099871-53099983)
chr3 (1-233)||(6954581-6954808)
chr3 (39-233)||(32701502-32701694)
chr3 (39-198)||(45424809-45424968)
chr3 (1-184)||(25460931-25461116)
chr3 (108-233)||(40556782-40556905)
chr3 (52-233)||(46304405-46304584)
chr3 (129-233)||(4711583-4711685)
chr3 (78-222)||(9173798-9173940)
chr3 (108-223)||(12050543-12050656)
chr3 (40-200)||(20608815-20608975)
chr3 (51-233)||(27856187-27856368)
chr3 (113-227)||(3085192-3085304)
chr3 (11-227)||(38545785-38545996)
chr3 (108-233)||(7448799-7448922)
chr3 (108-233)||(7456941-7457064)
chr3 (108-233)||(21313116-21313239)
chr3 (40-233)||(48650619-48650810)
chr3 (109-221)||(19619795-19619904)
chr3 (11-229)||(20464859-20465072)
chr3 (108-233)||(38859997-38860122)
chr3 (39-226)||(12149676-12149861)
chr3 (3-153)||(35864895-35865042)
chr3 (1-187)||(43016831-43017014)
chr3 (78-229)||(47041937-47042086)
chr3 (1-233)||(10233046-10233273)
chr3 (13-124)||(32246432-32246543)
chr3 (11-84)||(22290925-22290998)
chr3 (150-199)||(51487217-51487266)
chr3 (1-233)||(10108212-10108439)
chr3 (1-233)||(10229452-10229679)
chr3 (51-233)||(47896175-47896354)
chr3 (11-89)||(31794072-31794150)
chr3 (69-191)||(44647602-44647724)
chr3 (147-199)||(7792104-7792156)
chr3 (108-233)||(25631391-25631516)
chr3 (155-199)||(38142652-38142696)
chr3 (139-233)||(12946852-12946944)
chr3 (39-198)||(45425603-45425762)
chr3 (108-233)||(46178653-46178777)
chr3 (33-104)||(52496932-52497003)
chr3 (168-233)||(20987640-20987703)
chr3 (11-89)||(36734687-36734765)
chr3 (133-199)||(46220768-46220834)
chr3 (58-135)||(7887424-7887501)
chr3 (1-89)||(3606749-3606837)
chr3 (108-152)||(27066034-27066078)
chr3 (156-192)||(32246551-32246587)
chr3 (13-89)||(42719520-42719596)
chr3 (13-88)||(32607472-32607547)
chr3 (108-154)||(22803106-22803152)
chr3 (108-157)||(31271768-31271817)
chr3 (60-192)||(18011052-18011184)
chr3 (13-89)||(35499193-35499269)
chr3 (98-233)||(37040839-37040971)
chr3 (138-233)||(44959858-44959951)
chr3 (13-89)||(46934645-46934721)
[»] scaffold0009 (1 HSPs)
scaffold0009 (35-233)||(57973-58169)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-227)||(93080-93305)
[»] scaffold0042 (1 HSPs)
scaffold0042 (23-199)||(92413-92589)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-227)||(71191-71375)
[»] scaffold0888 (1 HSPs)
scaffold0888 (66-199)||(1595-1728)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-233)||(1321-1548)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-233)||(15468-15696)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-233)||(32632-32859)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-199)||(4141-4344)
[»] scaffold0121 (1 HSPs)
scaffold0121 (73-233)||(31159-31317)
[»] scaffold0262 (1 HSPs)
scaffold0262 (108-199)||(1736-1827)
[»] scaffold0050 (1 HSPs)
scaffold0050 (108-223)||(65937-66050)
[»] scaffold0088 (1 HSPs)
scaffold0088 (108-233)||(50857-50980)
[»] scaffold0884 (1 HSPs)
scaffold0884 (39-227)||(1864-2050)
[»] scaffold0015 (2 HSPs)
scaffold0015 (98-199)||(3958-4058)
scaffold0015 (34-96)||(4072-4134)
[»] scaffold0634 (1 HSPs)
scaffold0634 (39-226)||(8524-8709)
[»] scaffold0128 (1 HSPs)
scaffold0128 (108-192)||(36906-36990)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-233)||(71755-71976)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-233)||(7693-7919)
[»] scaffold0136 (2 HSPs)
scaffold0136 (50-192)||(38076-38221)
scaffold0136 (39-233)||(9927-10119)
[»] scaffold0154 (1 HSPs)
scaffold0154 (112-193)||(25375-25456)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-89)||(453936-454014)
[»] scaffold0064 (1 HSPs)
scaffold0064 (68-124)||(19066-19122)
[»] scaffold0219 (1 HSPs)
scaffold0219 (108-191)||(14796-14878)
[»] scaffold0113 (1 HSPs)
scaffold0113 (11-88)||(36683-36760)
[»] scaffold0014 (1 HSPs)
scaffold0014 (108-145)||(201326-201363)
[»] scaffold0311 (1 HSPs)
scaffold0311 (108-183)||(8778-8854)
[»] scaffold0095 (1 HSPs)
scaffold0095 (36-124)||(9396-9484)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 82)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 471276 - 471046
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  471276 agtgcggcgctgtgttgttcgtcgtctggtgcgacgtt---tgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 471180  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  471179 atcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgatttagattttatcatattatttgtaggcattttt 471080  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtgat 234  Q
    ||||| ||||||||||||||||||||||||||||    
T  471079 tgtcgatgtatgttattaacttgggtgatgtgat 471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 29617377 - 29617168
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | || |||||||||| | |||||||||||||| |||||||||||||||||||||| || ||||| ||||||| |||||    
T  29617377 tgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacagatt 29617278  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| ||||||  || ||| | ||||||| ||||||||||||||||||||||||||||| ||  |||||| ||||||    
T  29617277 caatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagattttatcatattatttgtaggca--ttttgttgttgta 29617180  T
Q  211 tgttattaactt 222  Q
    || |||||||||    
T  29617179 tgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 5333405 - 5333621
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| |  |||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||| ||||| |||    
T  5333405 agtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtca 5333504  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | ||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||  ||||||||||||| ||||||||||||||  ||  |||    
T  5333505 atcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttgtcatattatttgtatgca--ttt 5333602  T
Q  201 tgtcgttgtatgttattaa 219  Q
    ||| |||||||| ||||||    
T  5333603 tgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 15344295 - 15344514
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15344295 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15344393  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  15344394 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgtcgttgta 15344491  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  15344492 tgctattaacttgggtgctgtga 15344514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 15433360 - 15433579
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15433360 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15433458  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  15433459 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgtcgttgta 15433556  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  15433557 tgctattaacttgggtgctgtga 15433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 15524664 - 15524883
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15524664 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15524762  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  15524763 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgtcgttgta 15524860  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  15524861 tgctattaacttgggtgctgtga 15524883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18890816 - 18890582
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| ||||||||||||||| |  | | |||||| |  ||| ||||||||||| ||||||||||||| |||||    
T  18890816 agtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttca 18890717  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||| ||| ||| |||||| || ||||||||||||||||||||||||||||| ||     
T  18890716 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttagattttatcatattatttgtaggca- 18890618  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||||||||||||| |||||||||||||| |||||    
T  18890617 -ttttgtcgttgtatgctattaacttgggtgctgtga 18890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 1239499 - 1239286
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||| |||||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| | |||    
T  1239499 tgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacatatt 1239401  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||| ||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||| ||||||||| ||  ||||| |||||||    
T  1239400 caatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttgtaggca--ttttgacgttgta 1239303  T
Q  211 tgttattaacttgggtg 227  Q
    || ||||||||||||||    
T  1239302 tgctattaacttgggtg 1239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 8443624 - 8443427
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| | ||||||||||||  | |||||||||| ||| |||||||||||   ||||||||||| ||||| |||    
T  8443624 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtca 8443525  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattt 198  Q
    |||| | |||||||||||||||||  | ||||||||| |||||||||||||  |||||| || |||||||||||| ||||||||||||||||||||||    
T  8443524 atcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatcatattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 1236799 - 1236580
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||||| |||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| | |||    
T  1236799 tgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacatatt 1236701  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||| ||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||| ||||| ||| ||  ||||| |||||||    
T  1236700 caatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttttaggca--ttttgccgttgta 1236603  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  1236602 tgctattaacttgggtgctgtga 1236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39657426 - 39657628
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||| ||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||||||| ||||||||||| | |||||    
T  39657426 agtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagattagcttca 39657525  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||||| |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||    
T  39657526 gacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcat 39657625  T
Q  197 ttt 199  Q
    |||    
T  39657626 ttt 39657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 41896550 - 41896723
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| ||||||||||||| |||||  |||||| | ||||||| ||||||||  || ||||||||| |||||  |||||||| |||    
T  41896550 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagta 41896649  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||| |||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  41896650 ttctggtgatttagatttcatcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggtgttgtga 41896723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 42046263 - 42046427
Alignment:
Q  67 cgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga 166  Q
    |||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||| |||    
T  42046263 cgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtga 42046362  T
Q  167 tttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||| |||||||||||||||| ||  ||||| | | ||||| |||||||||||||| |||||    
T  42046363 tttagatttcatcatattatttgtaggca--ttttgacatcgtatgctattaacttgggtgttgtga 42046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 223
Target Start/End: Complemental strand, 14916263 - 14916081
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||||||||| || ||||| ||||||| |||||||||||||||||||  |||| | ||||    
T  14916263 tgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttg 14916164  T
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
     |||||||||||||||  |||| || ||||||||||||||||||||| ||||||| ||  |||||  |||||||| ||||||||||    
T  14916163 cagatccggaagcatgaatatt-tgttgatttagattttatcatattgtttgtaggca--ttttgcagttgtatgctattaacttg 14916081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23230622 - 23230849
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  | ||| |||    
T  23230622 agtgcggcgatttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 23230718  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||| ||| |||||||||||| |||||||||||||||||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  23230719 attacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggca--ttt 23230816  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| |||||||||||||| |||||    
T  23230817 tgtcgttgtatgctattaacttgggtgttgtga 23230849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 14585718 - 14585883
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| |||||||| |||| |||||  |||||| | ||||||||| |||||||  ||||||||||| |||||| ||||||||||||| ||| ||    
T  14585718 tcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtg 14585817  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||| |||||||||||||||| |   ||||| ||||||||| |||||||||||||| |||||    
T  14585818 atttagatttcatcatattatttgtaggc--gttttgccgttgtatgctattaacttgggtgctgtga 14585883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 8826200 - 8826407
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 112  Q
    ||||||||||||||| ||||| |||||| ||| || |||||||||||||||| || |||| ||| |||||||| |||| ||||| | |||||| ||||||    
T  8826200 tgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc-tttgattcatattgaaatatcaacttcaatgaatcatcgattca 8826298  T
Q  113 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatg 212  Q
    |||||||||||| || ||||||||| | ||  ||||||||| || ||||| |||||| | ||||||||||||| |||||| ||  |||| |||||| |||    
T  8826299 atcaatgatttgggcatcaacgttgcatatttggaagcatgtgtgttctggtgattttgtttttatcatattacttgtaggca--ttttatcgttgcatg 8826396  T
Q  213 ttattaacttg 223  Q
     ||||||||||    
T  8826397 ctattaacttg 8826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 7677357 - 7677166
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | ||||||| |||||| ||||||||||| || ||||| |||| | ||| ||||| | |||||| | |||||||||| |||||||||||| |    
T  7677357 tttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaaatatcaacatcagtcaattacagattcgaccaatgatttgagcgtcaacgttgca 7677258  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||  ||||  | ||| |||| |||||||||||||||||||  ||  ||||| |||||||||||||||||||||||| |||||    
T  7677257 gatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagca--ttttgccgttgtatgttattaacttgggtgctgtga 7677166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 27110540 - 27110348
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| ||||||| || ||| |||||| |||| | |||||||||   | |||  |||  | | ||||||||||||||||| ||||||||||||     
T  27110540 gtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaaagattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgc 27110441  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||| ||||| |  ||| ||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||| |||||    
T  27110440 agatctggaagcatgtgtattttagtgacttagattttatcatattatttgtagaca--ttttatcgttgtatgctattaacttgggtgttgtga 27110348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 17693689 - 17693496
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| || |||| |||||| | |||| |||| |||| |||||||  | ||| ||||| | | |||||| |||||||||| |||||||| |||     
T  17693689 gtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgc 17693590  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| |||||  ||||| |||  |||||||||||||||||||| || ||||||| |||||||||||||||||||| || |||||    
T  17693589 agatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggca-tttttgttgttgtatgttattaacttggatgttgtga 17693496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 43834043 - 43833879
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| ||||||| ||| | |||||  |||||| | ||||||||||||||||   ||||||||||| |||||  |||||||| |||||||| ||    
T  43834043 tcgtttggttcctattgaa-gattaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtg 43833945  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  43833944 atttagtttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgctgtga 43833879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16247333 - 16247112
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||| |||||| ||| ||||||   ||||||   ||||||| |||||| |||||| |||| ||| ||||||||  | ||| | |    
T  16247333 agtgcggcgttgtgttgttcatcgtcttgtgcgacgtt---tgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaagatcgacatcaatta 16247237  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | ||||||||||||||||| || |||| |||| |||||||||||||||||||||  | ||| |||||||| ||||||||||||| || ||  |||    
T  16247236 attacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggca--ttt 16247139  T
Q  201 tgtcgttgtatgttattaacttgggtg 227  Q
    || ||||||||| |||||||| |||||    
T  16247138 tgccgttgtatgctattaactcgggtg 16247112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 223
Target Start/End: Complemental strand, 20553316 - 20553134
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||||||||||| |||||| | |||  |||| ||||||||||||    ||| ||||| | | |||||| ||||||||||  |||||||||||     
T  20553316 gtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgc 20553217  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    ||||||||||||||| |||||  | ||| |||| |||||||||||||||||||| ||  ||||| ||||||||| ||||||||||    
T  20553216 agatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 33347595 - 33347418
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    |||||||||  ||||||||||||||| || |||| | || |||||||||||| ||||| ||||||| ||||||||||||||||||  ||||| ||||||     
T  33347595 gtttgatttcatgtcttgttgcggtgttcatttgatcct-attgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgc 33347497  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaa 219  Q
     |||||| |||||||||||||  | ||| | ||| ||||||||||||||||||| ||  ||||||| ||||||| ||||||    
T  33347496 ggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtaggca--ttttgtcattgtatgctattaa 33347418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 34609809 - 34609998
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| || ||||||| |||||| ||| |||||| ||||||||||||||||||||||||| ||||||| |||  |||||||||||| ||||| |||    
T  34609809 agtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgtttgtttc-cattgaaagatcaacttcagtca 34609907  T
Q  101 atc----atagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
    |||    | | || |||||||||||||| |||| ||||||| |||| ||  | |||| |||||| | |||||||| |||||||||||||||    
T  34609908 atcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagattcgagaacatgagtattccggtgatttaggttttatcatattatt 34609998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 21237800 - 21237994
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 134  Q
    |||||||||| || | |||||||||| ||| ||||||||||| |||||||||| ||  |||| ||||||  | |||||||||||||||||  |||||| |    
T  21237800 cgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatg 21237899  T
Q  135 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||| |||||| |||||||| ||| |||| ||||||||||||||||  ||| |||||||    |||||||||||||||  ||||||| |||||| |||||    
T  21237900 ttgcagatccagaagcatgtgtactctgttgatttagattttatc--attgtttgtag--gatttttgtcgttgtatcctattaacatgggtgttgtga 21237994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 24099368 - 24099172
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||||| || ||||||||||||||||  ||    ||||||||||||| |  ||||||||||||| || |||||||| |||||||| |||| ||||| |||    
T  24099368 agtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtca 24099269  T
Q  101 atc-----atagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||     | | ||||| |||||||||||| ||||||||||| ||||||||||| | |  |||| || |||||||||||||||||||||||||||||    
T  24099268 atcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagattttatcatattatttgtag 24099172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 8867888 - 8868014
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||||| || |||| |||| ||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||| ||  ||||||||||    
T  8867888 attcaatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtaggca--ttttgtcgtt 8867985  T
Q  208 gtatgttat---taacttgggtgatgtga 233  Q
    |||||||||   ||||||||||| |||||    
T  8867986 gtatgttatttataacttgggtggtgtga 8868014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 3240366 - 3240527
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||  ||||||||||||||| | || |||||| |||| | ||||||||  ||||||||||||  ||||| ||||||| | |||    
T  3240366 tgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatatt 3240465  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    ||||| ||||||||  || ||| |||| |||||| |||| |||||||||||| |||||||||    
T  3240466 caatcgatgatttggacgccaatgttgcagatccagaagtatgggtattctggtgatttaga 3240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 3673420 - 3673647
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | |||||||||||||||||  ||   || |||||||||| |||||||||||||||| || ||| |||| ||||||||||||  | ||| |||    
T  3673420 agtgcggtgttgtgttgttcgtcgtcttatg---cggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatcgacatcagtca 3673516  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | ||  |||||||| |||| |||||||||||| ||||||||||||||| |||||    ||| |||  ||| |||||||||||||||| ||  |||    
T  3673517 attacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggca--ttt 3673614  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||  ||||||||||| || |||||    
T  3673615 tgccgttgtatcctattaacttggatgctgtga 3673647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 7198206 - 7198078
Alignment:
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttg 202  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||||  |||| || |||||||||||||||||||||||||| ||  |  |||||    
T  7198206 cataaattcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttgcaggaa--ttttg 7198109  T
Q  203 tcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||| |||||| ||||||| |||||    
T  7198108 tcgttgtatgctattaatttgggtgttgtga 7198078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7883351 - 7883124
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   ||||||   ||||||| |||||| | |||  |||| ||||||||||||  | | | |||    
T  7883351 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatca 7883255  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||| |||||  ||||| ||||| |||||||||||||||||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  7883254 attacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggca--ttt 7883157  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||  |||||||||||||| |||||    
T  7883156 tgccgttgtatcctattaacttgggtgctgtga 7883124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10377668 - 10377895
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||| ||||| ||| | ||||   |||||| | || |||| | |||| | |||  |||| ||||||||||||  | ||| |||    
T  10377668 agtgcggcgttgtgttgttcgccgtcttgtgcggcgtt---tgatttcgcgttttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtca 10377764  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || ||| |||||| ||||||||||  | ||||||||| |||||||||||||||||||||  |  || |||  |||||||||||||||||||| ||  |||    
T  10377765 attataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggca--ttt 10377862  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  10377863 tgccgttgtatgctattaacttgggtgctgtga 10377895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40619183 - 40618964
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||| ||||||| ||||||||||   |||||| ||||||| | |||||| || ||| ||||||||| |||||||  |   | |||    
T  40619183 agtgcggcgttgtgttgtttgtcgtcttgtgtgacgtt---tgatttcgtgtcttatcgcggtgttcatttagttcttattcaaagatcgacaatagtca 40619087  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | ||||||||||| ||||| |||||||||||| |||||| |||||||| |||||  |  || ||| ||||||||||||||| ||||  ||  |||    
T  40619086 attacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatattatgtgtatgca--ttt 40618989  T
Q  201 tgtcgttgtatgttattaacttggg 225  Q
    || ||||||||| ||||||||||||    
T  40618988 tgccgttgtatgctattaacttggg 40618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 26469209 - 26469068
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||||  ||| |||||| |||| |||||||||||||  || | | ||||  | ||||||||||||||||| |||||||||||||  ||| | | ||    
T  26469209 gtcttgttgtagtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgtgcatctgaatgc 26469110  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||| |||||||| |||||||||||||||||||||||||||||    
T  26469109 atgtgtattctggtgatttagattttatcatattatttgtag 26469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 223
Target Start/End: Complemental strand, 20559818 - 20559637
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||||||||||  |||||| | |||  |||| ||||||||||||    ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  20559818 tttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgca 20559719  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    |||||||||||||| |||||  | ||| |||| |||||||||||||||||| | ||  ||||| ||||||||| ||||||||||    
T  20559718 gatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggca--ttttgccgttgtatgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 223
Target Start/End: Complemental strand, 20571380 - 20571199
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||||||||||  |||||| | |||  |||| ||||||||||||    ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  20571380 tttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgca 20571281  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    |||||||||||||| |||||  | ||| |||| |||||||||||||||||| | ||  ||||| ||||||||| ||||||||||    
T  20571280 gatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggca--ttttgccgttgtatgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 45445847 - 45445694
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||| | ||||||||||||| | ||| || ||| ||||||||||    
T  45445847 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagatttta 45445748  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| ||  |||||| ||| |||| ||||||||||| || |||||    
T  45445747 tcatattatttgtaggca--ttttgttgttttatgctattaacttggatgttgtga 45445694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 28897723 - 28897915
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| | |||| |||||| |||| ||||||||||||  | ||| ||||| |||  |||||| ||||||||| |||| |||||||     
T  28897723 gtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgttgc 28897822  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||||| || |  |||  ||||| ||||||||||||||||||||||||| ||  ||||||| || |||| ||||||| |||||| |||||    
T  28897823 agatacggaagtattgaaatttcgatgacttagattttatcatattatttgtagtca--ttttgtcattctatgctattaacgtgggtgttgtga 28897915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 8981155 - 8981292
Alignment:
Q  18 ttcgtcgtctg-gtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatca 116  Q
    ||||||||||| ||| | |||| |||||||| | |||||||||||||| ||||||| ||  ||||||||||||| | ||| ||||||| |||||||||      
T  8981155 ttcgtcgtctgagtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattg 8981254  T
Q  117 atgatttgtgcgtcaacgttgtagatccggaagcatgg 154  Q
    ||||||||  ||||||||||  ||||||||||||||||    
T  8981255 atgatttggacgtcaacgttacagatccggaagcatgg 8981292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 33214746 - 33214560
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| | |||| || ||| |||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| || |||||||||     
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||||||||||| | |||  ||||| |||  |||||||||||||||| ||||||  ||||| |||| |||| ||||||||| ||||    
T  33214646 agatccggaagcatgtgaatttcgatgacttatgttttatcatattatttttagaca--ttttgccgttttatgctattaactttggtg 33214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 37971331 - 37971489
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||| |||| |||||  | ||| ||||     
T  37971331 gttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttagg 37971430  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||| ||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  37971431 ttttatcacattatttgtaggca--ttttgccgttgtatgctattaacttgggtgttgtga 37971489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 5046794 - 5046959
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| |||||||| ||||  |||| ||||| | ||||||||||||| |||||  |||| |||||| |||| |  || ||||  ||||    ||    
T  5046794 tcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtg 5046893  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    | ||||| ||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||    
T  5046894 acttagaatttatcatattatttgtaggcattttat--cgttgtatgttattaacttgggtgatgtga 5046959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 40211378 - 40211185
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    |||||||||| | || |||| |||||| | |||| |||  ||||||||||||  | ||| || || | | |||| | |||||||||| ||||||||||||    
T  40211378 tgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttg 40211279  T
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||| |||||  | ||| || |||||||||||||||||||||  ||  || || ||||||||| ||||||  ||||||||||||    
T  40211278 tagatccggaagcatgagtatttcgttgacttggattttatcatattatttgtaagca--ttatgccgttgtatgctattaatctgggtgatgtga 40211185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 14545011 - 14544825
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 102  Q
    ||||||| ||| ||||| ||||||| ||||| ||||   ||||||   ||||||| |||||| || ||| |||| ||||||||||||  | ||| |||||    
T  14545011 tgcggcgttgttttgttagtcgtcttgtgtggcgtt---tgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatcaatcaat 14544915  T
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
     | |  || ||||||| ||||| |||||||||||| ||||||||||||||||| |||  | ||| ||| |||||||||||||||||||||    
T  14544914 tacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 31013683 - 31013491
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |  |||||| |||||| | |||  |||| |||||||| |||  | ||| ||||| | | |||||||||||||||||  |||||||||||     
T  31013683 gtttgatttcgcatcttgtcgcggtgtttgttcagttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgc 31013584  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||||||||| |||||    ||| |||  |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  31013583 agattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgttgtga 31013491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 25191167 - 25190979
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | ||||  ||| ||||||||||||| | ||| ||||| ||  |||    
T  25191167 tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaattatgaatt 25191071  T
Q  111 caatcaatgat--ttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    ||| |||||||  ||| |||||||||||| ||||||||||||||| | |||  ||||| |||| |||||||||||||||||||| |||||||    
T  25191070 caaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatattatttgtaggcattttt 25190979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 9637483 - 9637298
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | ||||| |||| ||  |||||| |||| ||||||||||||| | ||| | ||| | | |  |||| ||||||||| |||||||||||| |    
T  9637483 tttgatttcgcgtcttattgcagtattcgtttagttcctattgaaagatcaacatcagttaattacaaacacaattaatgatttgagcgtcaacgttgca 9637384  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||| ||||| |||| |||||  | | | |||| |||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||    
T  9637383 gattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcatttt--gtcgttgtatgctattaacttgggtg 9637298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 16928793 - 16928640
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | |||||| ||||||||||  | ||||||||| ||||||| |||| ||||||||  | ||| |||| |||||    
T  16928793 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggtttta 16928694  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| ||  ||||| | ||||||| |||||||||||||| |||||    
T  16928693 tcatattatttgtaggca--ttttgccattgtatgctattaacttgggtgttgtga 16928640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 222
Target Start/End: Complemental strand, 28086853 - 28086706
Alignment:
Q  74 ttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga-tttaga 172  Q
    ||||| ||||||||||  ||||| | ||| | | |||||||||||||||||   |||||||||| ||||||| || ||| ||||||    ||| ||||||    
T  28086853 ttcttgttgaaagatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttaga 28086754  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaactt 222  Q
    |||||||||||||||||||| ||  ||||||||||||||| |||||||||    
T  28086753 ttttatcatattatttgtaggca--ttttgtcgttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 30568327 - 30568204
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||| |||||||||||| |||||  |||||||| | |||  ||||| |||| ||||||||| |||||||||| ||  ||||| ||||    
T  30568327 attcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttaggttttatcatgttatttgtaggca--ttttgccgtt 30568230  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
     |||| |||||||||||||| |||||    
T  30568229 ttatgctattaacttgggtgttgtga 30568204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 10331164 - 10331244
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 178  Q
    ||||||| ||||||||||||| |||||  |||||||| ||||||||| |||||||| |||||||  |||||||||||||||    
T  10331164 tcaatcaaagattcaatcaataatttgaacgtcaacggtgtagatccagaagcatgagtattctagtgatttagattttat 10331244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 19444126 - 19444035
Alignment:
Q  52 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatc 143  Q
    ||||||||||||| ||||||| |||||||| ||||| |  ||||| |||||||||||||| || ||||||||| ||| |||| |||||||||    
T  19444126 tcttgttgcggtgttcgtttgattcttattaaaagaccgacttcagtcaatcatagattctattaatgatttgggcgacaactttgtagatc 19444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 27498464 - 27498255
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| ||| ||   |||||| | ||||||| | |||| || |||  ||| ||||||||||||| ||||| | | | | | |||    
T  27498464 tgtgttgttcgtcgtcttgtgcgacatt---tgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagttagt-acaaatt 27498369  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    |||| ||||||||| |||||||| ||| ||||  |||| |||||   ||| | ||||||||||||||||||||||||| ||||||  ||||||| || ||    
T  27498368 caattaatgatttgggcgtcaacattgcagatttggaaacatggtatttcag-tgatttagattttatcatattatttatagaca--ttttgtctttata 27498272  T
Q  211 tgttattaacttgggtg 227  Q
    |||||| ||||||||||    
T  27498271 tgttatgaacttgggtg 27498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 24186666 - 24186576
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||| ||||| |||||||||||| ||||||| |||||||||||||    ||| ||| ||||||||||||||||| ||| ||||||    
T  24186666 ttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttataggcatttt 24186576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 24419202 - 24419080
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga-tttt 176  Q
    |||||||||||||  |||| |||| || | ||||||||||||||||   ||||||||||||| |||| |||||||   ||||||||  ||||| | ||||    
T  24419202 tattgaaagatcagtttcagtcaaccaaatattcaatcaatgattttgacgtcaacgttgtaaatccagaagcataaatattctgacaatttaaattttt 24419103  T
Q  177 atcatattatttgtagacatttt 199  Q
    ||| |||||||||||||||||||    
T  24419102 atcttattatttgtagacatttt 24419080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 35580470 - 35580546
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| ||||||||||||||||  ||||| |||||||| ||||||| ||| ||||||| ||||    
T  35580470 tgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatc 35580546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 18846446 - 18846381
Alignment:
Q  134 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||| |||||| |||| ||||| || ||||||||||||||| ||||||||||||| ||||||    
T  18846446 gttgtagacccggaaacatgagtattatggtgatttagattttattatattatttgtaggcatttt 18846381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 26469309 - 26469232
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    |||||||| |||||| |||  ||||||||||| ||  ||||||||||| ||| ||||||||||| |||||||||||||    
T  26469309 tgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcctattgaaagatca 26469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 41684499 - 41684556
Alignment:
Q  142 tccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| |||||||||||||  ||||| ||||||||||||||||||||||||| ||||||    
T  41684499 tccgaaagcatgggtatttcgatgacttagattttatcatattatttgtaggcatttt 41684556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 27747103 - 27747051
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||||||    
T  27747103 attcaatcaaagatttgggcatcaacgttgtagatccggatgcatgggtattc 27747051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 35283333 - 35283248
Alignment:
Q  144 cggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgt 231  Q
    |||||||||| |||||  ||| | |||||||||||||||||||||||  | || |||| |||||||||| |||||||||| |||||||    
T  35283333 cggaagcatgagtatttcgatcacttagattttatcatattatttgt--atatattttatcgttgtatgctattaacttgtgtgatgt 35283248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 29939383 - 29939495
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||| |||| ||||||| | ||||  ||||||| |||||    ||| |||| |||||||||||||||||||| ||  ||||| ||||    
T  29939383 attcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggttttatcatattatttgtagtca--ttttgccgtt 29939480  T
Q  208 gtatgttattaactt 222  Q
    ||||| |||||||||    
T  29939481 gtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34493041 - 34493127
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaaga 87  Q
    |||||| || |||||||||||| |||  ||| |  ||||||||| ||||| ||||||||||||| ||||||||||| || |||||||    
T  34493041 agtgcgacgttgtgttgttcgttgtcatgtgcggtgttgtttgaatttgtctcttgttgcggtgttcgtttggttcctactgaaaga 34493127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 41060209 - 41060146
Alignment:
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||| ||| || |||||||||||||    
T  41060209 ttagattttatcatattatttgtagcca--ttttgttgttgtatgctatcaatttgggtgatgtga 41060146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 44100005 - 44099928
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| |||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 31634384 - 31634213
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||| ||||||| |||| ||||| |||||||||||||| |||| |||| || || ||||||| |||||||| ||||||    |||| ||||| | | |||    
T  31634384 tgtggtgttcgttgtcttgtgtg-cgttgtttgattttctgtcatgttacgatgttcgtttgattcttatttaaagattgaattcagtcaattacatatt 31634286  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat 183  Q
     ||||||||||||  |||||||  ||| | ||| ||| ||| |||||||||  | | || |||||||||||||    
T  31634285 taatcaatgatttaagcgtcaaaattgcaaatctggatgcaagggtattctagtcactttgattttatcatat 31634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaa 84  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| |||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 12184372 - 12184504
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||| |||||||||||| |||||| |||||  ||| |||| ||||  ||||||||   ||||  |||||||||||||||||||||   | |||||  |||    
T  12184372 attccatcaatgatttgggcgtcaccgttgctgattcggaggcatatgtattctggacattttaattttatcatattatttgtag--gtattttgctgtt 12184469  T
Q  208 gtatgttattaacttgggtgatgtgatattcttcg 242  Q
    ||||| |||| |||||| ||||||||  |||||||    
T  12184470 gtatgctattgacttggatgatgtgagtttcttcg 12184504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 12428800 - 12428932
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||| |||||||||||| |||||| |||||  ||| |||| ||||  ||||||||   ||||  |||||||||||||||||||||   | |||||  |||    
T  12428800 attccatcaatgatttgggcgtcaccgttgctgattcggaggcatatgtattctggacattttaattttatcatattatttgtag--gtattttgctgtt 12428897  T
Q  208 gtatgttattaacttgggtgatgtgatattcttcg 242  Q
    ||||| |||| |||||| ||||||||  |||||||    
T  12428898 gtatgctattgacttggatgatgtgagtttcttcg 12428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 27747186 - 27747107
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||| ||| ||| |||  ||||||||||  ||| ||||||||||| || |||| ||| |||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatca 27747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 28239927 - 28239973
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 154  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  28239927 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 28239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 17427289 - 17427208
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 92  Q
    |||||| ||| |||||| ||| | |||||||| ||||| ||||||| | || || || |||| |||||||||||||||||||    
T  17427289 tgtgttattcttcgtcttgtgcgccgttgtttaattttttgtcttgctacgatgttcatttgcttcttattgaaagatcatc 17427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 24853511 - 24853458
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 64  Q
    ||||||||||||||||  ||||||| |||||||||||   ||||||||||||||    
T  24853511 tgtgttgttcgtcgtcctgtgtgacattgtttgatttctcgtcttgttgcggtg 24853458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 37663101 - 37663064
Alignment:
Q  44 attttgtgtcttgttgcggtgctcgtttggttcttatt 81  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  37663101 attttgcgtcttgttgcggtgttcgtttggttcttatt 37663064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 17427206 - 17427154
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||||||||||||||||  ||||||| ||| |||||| ||| |||||||||||    
T  17427206 attcaatcaatgatttggacgtcaacattgaagatccagaaacatgggtattc 17427154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 25238535 - 25238486
Alignment:
Q  172 attttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||| ||||||    
T  25238535 attttatcatattatttatagaca--ttttgccgttgtatgttataaacttg 25238486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 39450552 - 39450640
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 124  Q
    |||||||||||||  || || ||| |||| |||||||||| || ||||||||||| ||| | ||||| | | |||||||||| ||||||    
T  39450552 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 39450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 43192417 - 43192341
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| ||| |||| || |||| ||| | ||||||||||    
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 52944305 - 52944526
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||| | ||| | |||||||| |||||| |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||    
T  52944305 agtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcagtca 52944404  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| |||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||  |||    
T  52944405 atcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatttcatcatattttttgtaggca--ttt 52944502  T
Q  201 tgtcgttgtatgttattaacttgg 224  Q
    ||| ||| |||| |||||||||||    
T  52944503 tgtagttatatgctattaacttgg 52944526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 33332685 - 33332494
Alignment:
Q  2 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactc 99  Q
    |||||||| ||||||||| |||| || ||| ||||||||||||||| |  ||||||||  ||||| |||||| ||| |||||||||||||| |||||  |    
T  33332685 gtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgtttttattgaaagatcaacttcagac 33332586  T
Q  100 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||  ||| ||||| ||| |||||||||||||||||||||||||||||||    
T  33332585 aatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatattatttgta 33332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 51888326 - 51888135
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||| ||||||  || ||||||||||||||| |  ||||||||||||| ||||||||||| ||||||||||||| ||||| |||    
T  51888326 agtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatca 51888227  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||| | ||| ||||||||||||    || ||||||| | ||| | ||||||| |||||||| |||||||||||||||||||||||||||||    
T  51888226 atcacaaatttaatcaatgattttgatgttaacgttgcatatctgaaagcatgagtattctggtgatttagattttatcatattatttgtag 51888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 9048672 - 9048856
Alignment:
Q  15 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 114  Q
    ||||| ||||||| ||| | |||||| |||||| | |||||||||||||| ||||||||||  | ||||||||| | ||||| | ||||| | |||||||    
T  9048672 ttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattcaat 9048771  T
Q  115 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||| |||||||||||| | ||| | || ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  9048772 caatgatttgagcgtcaacgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatattatttgtaggcatttt 9048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36194699 - 36194932
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||    
T  36194699 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 36194798  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | |||||||||||||||||  | |||| |||| |||||| ||| ||||||||||||| |||||||||||| |||||||||||||||| ||     
T  36194799 aacaatcacaaattcaatcaatgatttga-catcaaagttgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtaggca- 36194896  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||| ||||||||| ||||||||||| || |||||    
T  36194897 -ttttgccgttgtatgctattaacttggatgttgtga 36194932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10496332 - 10496553
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||||||||||   |||||||| ||||||| || ||| |||||| |||| ||||||||||||  | ||| |||    
T  10496332 agtgcggcgatgtgttgttcgtcgtcttgtgtgacgtt---tgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatcagtca 10496428  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||| ||| ||||||| |||||||||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  10496429 attacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtaggca--ttt 10496526  T
Q  201 tgtcgttgtatgttattaacttgggtg 227  Q
    ||  || ||||| ||||||||||||||    
T  10496527 tgctgtcgtatgctattaacttgggtg 10496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31891406 - 31891172
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||||  ||||||||||||| |  ||  ||||||  ||||| ||||||||||| |||||||| ||||  ||||    
T  31891406 agtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggttcgtattgaaaaatcagtttca 31891307  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | |||||| | |||||||| |||||||||||| | |||| |||||||| |||||||| |||||||||||| || ||||||||||||| ||     
T  31891306 gacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgatttagatttcattatattatttgtaggca- 31891208  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||| ||||||||| |||||||||||||| |||||    
T  31891207 -ttttgccgttgtatgctattaacttgggtgttgtga 31891172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 36161719 - 36161935
Alignment:
Q  15 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 114  Q
    |||||||| |||| ||| | ||||||||||||||  || ||||||||||| |||||| |||| ||| ||||||| |  |||| ||||||| | |||||||    
T  36161719 ttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagtttcagtcaatcacatattcaat 36161818  T
Q  115 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtt 214  Q
    ||||||||||  || |||||||  ||||||| || |||| ||||| |  ||||||||||||||||||||||||||||| ||  ||| |||||| ||||||    
T  36161819 caatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtaggca--tttggtcgttatatgtt 36161916  T
Q  215 attaacttgggtgatgtga 233  Q
    ||||||||||||| |||||    
T  36161917 attaacttgggtgttgtga 36161935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 233
Target Start/End: Original strand, 21662466 - 21662661
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    |||||||||||| | ||||||| |||||  |||||| |||| ||||||||||||| | ||| ||||| | | || |||||||||||||| ||||||||||    
T  21662466 gttgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgt 21662565  T
Q  136 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||||||||||||||||||||  | ||| |||| |||||||||||||||||||||||   ||||  |||||||| |||||||||| ||| |||||    
T  21662566 tgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagaca--ctttggtgttgtatgctattaacttgagtgttgtga 21662661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 233
Target Start/End: Original strand, 21671230 - 21671425
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    |||||||||||| | ||||||| |||||  |||||| |||| ||||||||||||| | ||| ||||| | | || |||||||||||||| ||||||||||    
T  21671230 gttgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgt 21671329  T
Q  136 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||||||||||||||||||||  | ||| |||| |||||||||||||||||||||||   ||||  |||||||| |||||||||| ||| |||||    
T  21671330 tgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagaca--ctttggtgttgtatgctattaacttgagtgttgtga 21671425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 22038907 - 22038718
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||| | | ||||| ||||||||||||| | ||||||||| |||||||||||||||| ||||||||||||  ||||| ||||||| | |||    
T  22038907 tgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatatt 22038808  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| ||||||||   | |||| |||| |||||| |||||||| |||||  | ||||||| ||||||||||| ||||||||| |||||||    
T  22038807 caataaatgattttgacatcaatgttgcagatccagaagcatgtgtatttcggtgatttaaattttatcataatatttgtaggcattttt 22038718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 27651944 - 27652167
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| |  |||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| ||| |  |||||| |    
T  27651944 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagctttagacaatcaca 27652043  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||  || ||||||||| |||||||||||||||||||  ||||| |||    
T  27652044 aattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg-tttagatttcatcatattatttgtagaca--ttttgccgt 27652140  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||| ||| |||||    
T  27652141 tgtatgctattaacttgagtgttgtga 27652167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 28857396 - 28857586
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||| |||| ||| | ||||||||||||  | |||| ||||||||| ||||||| ||| ||||||||||||| ||||| |||    
T  28857396 agtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtca 28857495  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||| | |||||||  ||||||||  || |||||||  |||||||||||||| ||| ||||| |||||||||||| |||||||| |||||||    
T  28857496 atcacatattcaattgatgatttggacgccaacgtttcagatccggaagcat-ggttttctggtgatttagatttcatcatattttttgtag 28857586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 54021892 - 54022073
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| ||||||||| |||||| |||||| |||| ||||||||||||  | ||| ||||| | | ||| |||||||||||||   ||||||||||     
T  54021892 gtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgc 54021991  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    ||||||| || ||||| ||||  | ||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  54021992 agatccgaaaacatggatatttcggtgacttagattttatcatattatttgtagaca---tttgtcgttgtatgttattaacttg 54022073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 55227982 - 55228181
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| ||||||| |||  |||||||| ||||||| || || |||||||| ||||||| ||| |||| | | |||| ||||  |||||||  ||||    
T  55227982 tgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattgcggtgttcgtttgattcctattaacaaatcaacttcggtcaatcacggatt 55228081  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
      |||||||||||| |||||||||||||| ||||| ||||||| || ||||  |||||||||||| |||||||||||||||||||  |||||||||||||    
T  55228082 tcatcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatattatttgtagaca--ttttgtcgttgta 55228179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 6155340 - 6155114
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | |||||||| |||| ||| ||| | ||||||||||||| |||| |||| || ||| ||||||| ||| |||||||||||||  |||| |||    
T  6155340 agtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatattgaaagatcagtttcagtca 6155242  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaag---catgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    |||| |  ||||||| |||||||   ||| ||||||| |||||||||||   ||| | ||||||| ||||||||||| ||||||||||||||||| ||      
T  6155241 atcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatattctggtgatttagattctatcatattatttgtaggca-- 6155144  T
Q  198 ttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||||||||||| ||||||||||||||    
T  6155143 ttttgtcgttgtatgctattaacttgggtg 6155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 9643382 - 9643562
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||||| || ||||||||||||||||| | | |||||||||||||||    ||||||||| ||| ||||||||||| |||| |||||||| ||||| |||    
T  9643382 agtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtca 9643481  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcat 181  Q
    |||| | ||||||| |||||||||  | |||| ||| |||||||||||| ||| |||||||| ||||||| ||||||||||    
T  9643482 atcacatattcaattaatgatttgaacatcaatgttatagatccggaagtatgagtattctggtgatttaaattttatcat 9643562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 18935833 - 18936006
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| ||||||||||| | |||||  |||||| | ||||||| ||||||||| || ||||||||| ||||||  |||||| ||||    
T  18935833 tgcggtgttcgtttggttcgtattgaaagattaacttcagacaatcaaaaattcaattaatgatttgggcatcaacgttgcagatccaaaagcataggta 18935932  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||| |||||||||||||||| ||||||  |   ||||| |||||||||||||||| |||||    
T  18935933 ttctggtgatttagatttcatcatattatttgtaggcatttt--gctattgtacgttattaacttgggtgttgtga 18936006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 47320430 - 47320297
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||      
T  47320430 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca-- 47320333  T
Q  198 ttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||| |||||||||||||| |||||    
T  47320332 ttttgccgttgtatgctattaacttgggtgctgtga 47320297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 17949401 - 17949209
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| || |||| |||||| ||||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||| | ||||||||||||     
T  17949401 gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgc 17949302  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||||| ||||  ||  ||||||  |||||||||||||||||||||| |||||    
T  17949301 agatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgca--ttttgttcttgtatgttattaacttgggtgttgtga 17949209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 17953253 - 17953061
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| || |||| |||||| ||||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||| | ||||||||||||     
T  17953253 gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgc 17953154  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||||| ||||  ||  ||||||  |||||||||||||||||||||| |||||    
T  17953153 agatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgca--ttttgttcttgtatgttattaacttgggtgttgtga 17953061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21686353 - 21686127
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||  |||||| | |||  |||| ||||||||||||  | ||| |||    
T  21686353 agtgcggcg-tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctacatcaatca 21686258  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
     | | | |||||| ||||||||||  ||||||||||| ||||||||||||||| ||||| || |||||||| |||||||||||||||||||| ||  |||    
T  21686257 gttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggca--ttt 21686160  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || || ||||||||||||||||||||| |||||    
T  21686159 tgccgctgtatgttattaacttgggtgctgtga 21686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 1621559 - 1621427
Alignment:
Q  61 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||||| ||||||||||||||||| |||| ||||||| |||||| |||    ||||||||    
T  1621559 ggtgttcgtttggttcgtattgaaagatcagcttcaaacaatcataaattcaatcaatgatttgggcgt-aacgttgcagatccagaa----gggtattc 1621465  T
Q  161 tgatgatttagattttatcatattatttgtagacattt 198  Q
    || |||||||||||| ||||||||||||||||||||||    
T  1621464 tggtgatttagatttcatcatattatttgtagacattt 1621427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 2069680 - 2069505
Alignment:
Q  16 tgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatc 115  Q
    |||||||| ||  ||| ||||||||||||||| |  ||||||||||||  || |||||||| |||||||| ||||  || | ||||||||||||||||||    
T  2069680 tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatc 2069581  T
Q  116 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||| ||||| | |||||||||| | ||   |||||||||||||| || ||||||| ||||||||||||||||||||    
T  2069580 aattatttgggtgtcaacgttgcaaatttagaagcatgggtattatggtgatttatattttatcatattatttgta 2069505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 22611180 - 22611407
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||||| || |||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  22611180 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtca 22611276  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  22611277 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggca--ttt 22611374  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||| ||||||| |||||    
T  22611375 tgccgttgtatggtattaaattgggtgctgtga 22611407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 56040758 - 56040531
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   | |||||| ||||||| || ||| | |||| |||| ||||| ||||||  | ||| |||    
T  56040758 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---taattttgcgtcttgtcgcagtgtttgtttagttcctattggaagatctacatcagtca 56040662  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| ||| |||||||| |||||| ||||||||||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  56040661 attacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggca--ttt 56040564  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||||||| || |||||    
T  56040563 tgtcgttgtatgctattaacttggatgctgtga 56040531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 2520850 - 2521003
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | ||| || ||||||||||  ||||||||||| |||||||||||||||||||||  | ||||||||||||||    
T  2520850 tattgaaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagatttta 2520949  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  2520950 tcgtattatttgtaggca--ttttgccgttgtatgctattaacttgggtgttgtga 2521003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 9713916 - 9714134
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||| ||||  ||| |||||||||||||||    | ||||||||| | ||||||  ||| ||||| ||||||| |||||  |||||| | |||    
T  9713916 tgtgttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatcagcttcaaacaatcacaaatt 9714015  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||| |||||| |||||||||||| ||||| ||||||  |  ||||||  ||| ||||||||||||||||||||||||| ||  ||||||| |||||    
T  9714016 caatcaacgatttgggcgtcaacgttgcagatctggaagc--gtatattctagtgaattagattttatcatattatttgtaggca--ttttgtcattgta 9714111  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    |||| |||||||| ||| |||||    
T  9714112 tgttgttaacttgagtgttgtga 9714134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36204500 - 36204296
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtga-cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 99  Q
    ||||||||| ||||||||||||||||  ||  |  ||||||||||||| |  | ||||||||||| || |||||||| |||||||| |||| ||||| ||    
T  36204500 agtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattgaaaaatcagcttcagtc 36204401  T
Q  100 aatcatag-----attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagac 194  Q
    ||||| |      |||||||||||||||||  ||||||||||| |||||||||||   |  ||||||| ||||||||||||||||||||||||||||||     
T  36204400 aatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttagattttatcatattatttgtagat 36204301  T
Q  195 atttt 199  Q
    |||||    
T  36204300 atttt 36204296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 43853446 - 43853667
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaag-at-catcttcac-tcaatcatag 107  Q
    |||||||||| || ||| ||| | ||||||||||||| | || |||||||||||||| |||||||| ||||||||| || | | || |  | |||  |||    
T  43853446 tgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaagcatgcgtattaatgtgaat--tag 43853543  T
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||  ||||||||||||| ||||||||||| |||| |||||||||| |||||  |||||||||||||||||||||||||||||   ||  |||||| |||    
T  43853544 attttatcaatgatttgtacgtcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatattatttgtcagca--ttttgttgtt 43853641  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||| || |||||    
T  43853642 gtatgttattaacttggatgttgtga 43853667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 192
Target Start/End: Complemental strand, 12199769 - 12199617
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||| |||||||||||||| |||||| |||| |||||||| |||| ||||| ||| | | |||||||||||| |||||| ||||| |||||  |    
T  12199769 tttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtcagttacagattcaatcaaagatttgagcgtcgacgttaca 12199670  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||| |||||||||| | ||| ||  || ||||| |||||||||||||||||||    
T  12199669 gattcggaagcatgagaattttggcgacttagaatttatcatattatttgtag 12199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 18048887 - 18048991
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||| ||||||| ||| ||||||||||| | ||||| |||||||||||||    
T  18048887 tgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagatt 18048986  T
Q  111 caatc 115  Q
    |||||    
T  18048987 caatc 18048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 233
Target Start/End: Original strand, 37465510 - 37465706
Alignment:
Q  34 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac 133  Q
    ||||||||||||||   ||||| ||  |||| |||||||||||  |||||||||||||||||  ||||||  | ||||||||||| |||||  | |||||    
T  37465510 acgttgtttgatttcacgtcttcttttggtgttcgtttggttcacattgaaagatcatcttcggtcaatcgcatattcaatcaataatttggacatcaac 37465609  T
Q  134 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||  ||||||  ||  || | ||||||| ||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||||| |||||    
T  37465610 gttacagatccataaa-atagatattctggtgatttagattttatcatattatttgtaagca--ttttgtcgttgtatgctattaacttgggtgttgtga 37465706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 52061000 - 52060840
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    |||||||| |||||||||||| |||| ||||||  ||| ||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||  | |||||    
T  52061000 gtttgattatgtgtcttgttgaggtgttcgtttaattcctattgaaagatcaacttcagtcaattacagattcaatcaatgatttgggcgttgatgttgt 52060901  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||  ||||||||| ||||   |||| || || ||||||||||| ||||||| ||||||    
T  52060900 agatctagaagcatggatatttcaatgactttgaatttatcatattttttgtaggcatttt 52060840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 13634112 - 13634339
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| || |||    ||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  13634112 agtgcggcgttgtgttgttcgtcgtcttgtgcgaggtta---gatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatca 13634208  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||| ||||||  ||||||||||| |||||||||| ||||||||||    |||||||| ||||||| ||||||||||||   | |||    
T  13634209 attacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattatttgtag--ttattt 13634306  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  13634307 tgccgttgtatgctattaacttgggtgctgtga 13634339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 19853624 - 19853397
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||||||||  |||| | ||   |||||||| || || |  ||||| | |||  |||| ||||||||||||  | |||||||    
T  19853624 agtgcggcgttgtgttgttcgtcgtcttatgtggcatt---tgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctacatcactca 19853528  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||| ||||  | ||| |||  |||||||||||||||| ||| ||  |||    
T  19853527 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggca--ttt 19853430  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  19853429 tgccgttgtatgctattaacttgggtgttgtga 19853397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 32766511 - 32766738
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| |||| |||||||  | ||| |||    
T  32766511 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtca 32766607  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||||||||||||||  |||||| |||| |||||||||| ||||||||||  | ||| |||  |||||||||||||||||||| ||  ||     
T  32766608 attacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggca--tta 32766705  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| |||||||||||||| |||||    
T  32766706 tgtcgttgtatgctattaacttgggtgctgtga 32766738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 22300844 - 22301026
Alignment:
Q  2 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 101  Q
    ||||| || ||||||||||||||||| ||| | ||||||||||||| | ||| |||||||||| | |||| | || | ||||||||||| ||| | ||||    
T  22300844 gtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaa 22300943  T
Q  102 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 184  Q
    ||| |||||||||| ||||||||  || | |||||| ||||||| || |||| ||||| || |||||||||||| || |||||    
T  22300944 tcacagattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatttcattatatt 22301026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 199
Target Start/End: Complemental strand, 10258974 - 10258813
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    |||||||||| | ||||||  |||||| |||||| |||| | ||||||||||  | | | ||||| | | ||||||||||||||||| ||| ||||||||    
T  10258974 tgtttgatttcgcgtcttgacgcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttg 10258875  T
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
     | | |||||||||||  |||| || ||| ||||||||||||||||||||||||||||||||    
T  10258874 catacccggaagcatgaatattttggtgacttagattttatcatattatttgtagacatttt 10258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 31359852 - 31359671
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||| |||||||||| ||| |||||||| ||||||   |||||||||| ||| | | ||||||| |||| |||||||| ||| | ||||||| |||||    
T  31359852 tgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaatcacagatt 31359753  T
Q  111 caatcaatga-tttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    |||||||  | ||||   |||||||||| |||| | |||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  31359752 caatcaaacaatttggaagtcaacgttgcagattccgaagcatgtgtaatctggtgatttagattttctcatattatttgta 31359671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 53444125 - 53444342
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| |||   || | |||||||| | || |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | |||    
T  53444125 tgtgttgttcgtcgtcttgtg---cggtatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 53444221  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||| |||||||||| ||||||| |||| ||||||||||||||| | |||  | ||| |||| ||||||||||||||||||||| ||||||   |||| ||    
T  53444222 caaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtagatattttt--ccgtttta 53444319  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  53444320 tgctattaacttgggtgctgtga 53444342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 53811094 - 53811252
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||      
T  53811094 gttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag 53811193  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  53811194 ttttatcatattatttgtaggca--ttttggcgttgtatgctattaacttgggtgttgtga 53811252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 48351265 - 48351093
Alignment:
Q  37 ttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 136  Q
    ||||||||||| | |||||||  ||||| ||||||||||  ||||||||||||| ||||| ||||||| | |||||| | ||||||||  ||||  ||||    
T  48351265 ttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacgtccgcgtt 48351166  T
Q  137 gtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtat 211  Q
    | ||||| ||||||||| |||||  | ||||||||||| |||||| |||||||||  ||  ||||||||||||||    
T  48351165 gcagatctggaagcatgagtattacggtgatttagattgtatcatgttatttgtatgca--ttttgtcgttgtat 48351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 4142867 - 4142669
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||  ||||||||| |||| |||| |||||| | |||   ||| | ||||||||||  | ||| |||    
T  4142867 agtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatcagtca 4142768  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| ||||||||||  ||||||||||| |||||| ||| |||| |||||  | ||| |||  |||||||||||||||||||||||||||    
T  4142767 attacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtagacatttt 4142669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 33921155 - 33921278
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||||||    ||| ||||||||||||||||||||||||| |||| | |   |||    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcattgtata--gtt 33921252  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||||| || |||||    
T  33921253 gtatgctattaacttggatgttgtga 33921278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 35395785 - 35395619
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||  ||||||||||||| | ||||||||| |||| | ||||||| ||||||||||||||||| ||||         
T  35395785 agtgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgatctagtgtcttgtcgcggcgttcgtttgtttcttattgaaagatcaacttc----- 35395691  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
         | ||||||| ||| |||||  ||||||||||| | |||| ||| ||||||||||||| || |||||||||||    
T  35395690 -----aaattcaataaattatttgaacgtcaacgttgcaaatccagaaacatgggtattctggtgctttagatttta 35395619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 45418613 - 45418730
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||||| || ||||||||| ||||||| |||||   |||||  | ||| ||||||||||||||||||||||||| ||  ||||||||||    
T  45418613 attcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggca--ttttgtcgtt 45418710  T
Q  208 gtatgttattaacttgggtg 227  Q
    ||||| ||||||| ||||||    
T  45418711 gtatgctattaacatgggtg 45418730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 35348304 - 35348531
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| || |||||||| |||| |||||| |||  ||||||||||||  |   | |||    
T  35348304 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatcggcgatagtca 35348400  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||| ||   |||||||||| ||||||||||||||| | |||   |||| |||| |||||||||||||||||||| ||  |||    
T  35348401 attacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtaggca--ttt 35348498  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || | || |||| |||||||||||||| |||||    
T  35348499 tgccattttatgctattaacttgggtgttgtga 35348531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 43510305 - 43510420
Alignment:
Q  116 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtta 215  Q
    |||||||||  |||||| |||| |||||| ||||||||||||||  | ||| |||  |||||||||||||||||||| ||  |||||||||||||||| |    
T  43510305 aatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttttgtcgttgtatgtca 43510402  T
Q  216 ttaacttgggtgatgtga 233  Q
    |||||||||||| |||||    
T  43510403 ttaacttgggtgctgtga 43510420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 8670482 - 8670677
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||| ||| ||| |||   || |||||||||| | | ||||| |||||| ||||||  ||| ||||||||||||  | ||| |||    
T  8670482 agtgcggcgttgtgttgttagtcatcttgtg---cggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtca 8670578  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| |||||||||| |||||||||||| ||||||| ||||||| | |||  | ||| ||||  |||||||||||||||| || ||||||    
T  8670579 attacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatattatttgaaggcatttt 8670677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 47158286 - 47158449
Alignment:
Q  68 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac-gttgtagatccggaagcatgggtattctgatga 166  Q
    |||||| |||||||||||||| | |||||  |||||| |||||||||||||||||||  ||||| |  ||| ||||| | ||| ||| |||||||| |||    
T  47158286 gtttggatcttattgaaagattaacttcagacaatcacagattcaatcaatgatttggccgtcatcatttgcagatctgaaagtatgagtattctgctga 47158385  T
Q  167 tttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| ||||||| |||||||||  ||   ||| |||||||||| ||||||||||| ||||||||    
T  47158386 tttagatattatcat-ttatttgtatgca--ctttatcgttgtatgctattaacttggatgatgtga 47158449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 52934059 - 52933834
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttgg-ttcttattgaaagatcatcttcactc 99  Q
    ||||||||| ||||||||||||| | | |||   ||||||||||||| |  |||||||||||||||  ||| | ||| ||||||||||||| ||||| ||    
T  52934059 agtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaagatcagcttcaatc 52933960  T
Q  100 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
     |||| ||||||||||||| |||||  || |||| ||  ||||| ||      |  |||| || |||||||||||||||||||||||||||||   | ||    
T  52933959 gatcaaagattcaatcaataatttggacgacaacatttcagatctgg------gaatattatggtgatttagattttatcatattatttgtag--gtatt 52933868  T
Q  200 ttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||   |||||||||||||||||| |||||||||    
T  52933867 ttgcttttgtatgttattaacttgagtgatgtga 52933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 24099110 - 24098984
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||| ||||||||||    ||| ||||     
T  24099110 gttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttagg 24099011  T
Q  173 ttttatcatattatttgtagacatttt 199  Q
    |||||||||||||||||||| ||||||    
T  24099010 ttttatcatattatttgtaggcatttt 24098984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 233
Target Start/End: Complemental strand, 29960997 - 29960834
Alignment:
Q  68 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgat 167  Q
    |||| |||| ||||||||||||  | ||| ||||| ||| |||||| | |||||||  || ||||||||| |||||||||| |||   |||| |  ||||    
T  29960997 gtttagttcgtattgaaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgat 29960898  T
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| ||||||||| ||  ||||| ||||||||| | |||||||||||| |||||    
T  29960897 ttagattttatcatactatttgtaggca--ttttgccgttgtatgcttttaacttgggtgctgtga 29960834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 37030262 - 37030479
Alignment:
Q  5 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    ||||| ||||||||||||||||| || || ||||   ||||||  |||||||| ||||||  |||||||||  |||  |||||||| ||||| ||||  |    
T  37030262 cggcgttgtgttgttcgtcgtcttgtatggcgtt---tgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaata 37030358  T
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtc 204  Q
     |||||||||||||||||||  | || |||||| |||||   || ||||||||||    ||| |||||  ||||||||||||||||||||||||   | |    
T  37030359 cagattcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttcagtgacttagaaattatcatattatttgtagacattta--gcc 37030456  T
Q  205 gttgtatgttattaacttgggtg 227  Q
     ||||||| ||||||||||||||    
T  37030457 attgtatgctattaacttgggtg 37030479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 38166267 - 38166155
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||| ||| | | |||||||||||||| ||||||||||  | ||||||||| |||||||||  |||| |||||||| ||||||  ||||||    
T  38166267 tattgaaagatcaactt-agttaatcatagattcaagcaatgatttggacatcaacgttgcagatccggagacatgagtattctgttgattttaatttta 38166169  T
Q  178 tcatattatttgta 191  Q
    | ||||||||||||    
T  38166168 taatattatttgta 38166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 9178385 - 9178577
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||||| | | || |||||||| ||||| || |||||||||     
T  9178385 gtttgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaaagatcgacatcaatcaattacaaatccaatcaataatttgagcatcaacgttgc 9178484  T
Q  139 agatccggaagcatgggtatt-ctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||   ||||| | || || || | |||||||||||||||||||| ||||||  ||||||||||| |||||||||| |||| ||||    
T  9178485 agatctggaagcaaaagtatttcaga-gacttcggttttatcatattatttgtaggcatttt--gtcgttgtatgctattaacttgtgtgacgtga 9178577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 36700377 - 36700457
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    ||||||||||||||||| |||||||||||| | ||| |||||| ||||||||  ||||| ||| |||||||||||||||||    
T  36700377 attcaatcaatgatttgggcgtcaacgttgcaaatctggaagcgtgggtatttcgatgacttaaattttatcatattattt 36700457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 56156754 - 56156559
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||||| |   ||||||||| | ||||||| |||||| |||||| |||| | ||||||||| | | ||| |||    
T  56156754 agtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaaagattaacatcagtca 56156658  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| |||||||| | |||||||| ||| ||||| ||||||||| | |||  | ||| |||  ||||||||  |||||||||| ||||||    
T  56156657 attacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatgtgaatttcggtgacttatgttttatcaatttatttgtaggcatttt 56156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 9145914 - 9145808
Alignment:
Q  92 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||| ||||||| || |||||||||||||||   | |||||||| || ||||||||||||| |||||||| ||||||||||| ||||||||| ||| ||    
T  9145914 cttcagtcaatcagag-ttcaatcaatgatttagacatcaacgttatatatccggaagcatgagtattctggtgatttagattgtatcatattgtttata 9145816  T
Q  192 gacatttt 199  Q
    | ||||||    
T  9145815 ggcatttt 9145808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 29120375 - 29120276
Alignment:
Q  120 atttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaa 219  Q
    ||||| |||||||| ||| ||||| ||||||||| |||||  | | | ||||||||||||||||||||||||| ||  ||||||||||||||| ||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggca--ttttgtcgttgtatgctattaa 29120278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 42032546 - 42032424
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    ||||||| | ||||||| ||||||||| | | |||||||| |||||| |||||||| ||||  || |||||||||| ||||||||||||| |||| ||      
T  42032546 tcaatcacatattcaataaatgatttgggtgccaacgttgaagatccagaagcatgagtatcttg-tgatttagatgttatcatattattggtagcca-- 42032450  T
Q  198 ttttgtcgttgtatgttattaacttg 223  Q
    ||||| ||||||||| ||||||||||    
T  42032449 ttttgccgttgtatgctattaacttg 42032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 4937861 - 4937958
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaa 132  Q
    ||||||||||||||   ||||||||||| | ||||||| || |||||||||||||| ||||| || || ||| ||||||||||||||||  |||||||    
T  4937861 cgttgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttaggcgtcaa 4937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 21554798 - 21554707
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||||||||||  ||||||  ||||||||||  ||| ||| |||||||||| ||||  |||||||| |||||||||||| ||||||    
T  21554798 attcaatcaatgatttgaacgtcaatattgtagatccaaaaggatgagtattctgatcattttaattttatcttattatttgtaggcatttt 21554707  T

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Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 36184632 - 36184755
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||||  | |||||||||||||||| ||| ||||   |||| || | | || |||||||||||| ||||| ||| ||  ||||||||||    
T  36184632 attcaatcaatgattttggtgtcaacgttgtagatcaggaggcataaatattatggtcactttgattttatcatactatttctaggca--ttttgtcgtt 36184729  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||||| || |||||    
T  36184730 gtatgctattaacttggatgttgtga 36184755  T

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Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 52204433 - 52204375
Alignment:
Q  14 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttg 72  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||| ||||| |||||||    
T  52204433 gttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttcgtttg 52204375  T

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Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 22305582 - 22305516
Alignment:
Q  155 gtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    ||||| |||||| |||||||||||||||||||||||||   | ||||||||||||||| ||||||||||    
T  22305582 gtattttgatgacttagattttatcatattatttgtag--gtattttgtcgttgtatgctattaacttg 22305516  T

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Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 26090970 - 26090795
Alignment:
Q  60 cggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 159  Q
    ||||| |||||| |||| | ||||||||||  | ||| ||||| ||| ||||||  ||||||||| |||||||||||| | || ||||||||| ||||||    
T  26090970 cggtgttcgtttagttcatcttgaaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatt 26090871  T
Q  160 ctgatgatttag----attttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
      | ||| ||||    |||||||||||||||||| ||  || | ||||||||||||| |||||| |||| || |||||    
T  26090870 tcggtgacttagatatattttatcatattatttgcag--atatattgtcgttgtatgctattaatttggatgctgtga 26090795  T

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Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37683884 - 37683972
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcg-tttggttcttattgaaagat 88  Q
    ||||||||| |||||||||| |||||| ||||   |||||||||||| | |||||||||||||| ||| |||||||  |||||||||||    
T  37683884 agtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgttcgttttggtttctattgaaagat 37683972  T

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Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 7008972 - 7008874
Alignment:
Q  131 aacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatg 230  Q
    ||||||||||||||| |||| || |||| | | ||||||| ||||||||||||||||||| ||||  ||||| ||||||||| ||||||||| |||| ||    
T  7008972 aacgttgtagatccgaaagcttgagtat-cag-tgatttaaattttatcatattatttgtggaca--ttttgccgttgtatgctattaacttaggtgttg 7008877  T

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Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 44596780 - 44596884
Alignment:
Q  127 cgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    |||||||||||  ||| || || ||| ||||||  ||||||||| |||||||||||||||||||||   | ||||  ||||||||| |||||||||||||    
T  44596780 cgtcaacgttgctgattcgaaaacataggtatttcgatgatttacattttatcatattatttgtag--ctattttaccgttgtatgctattaacttgggt 44596877  T
Q  227 gatgtga 233  Q
    | |||||    
T  44596878 gctgtga 44596884  T

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Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 43095733 - 43095852
Alignment:
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtat 211  Q
    |||||||||||||  |||||||  || ||||||||||||||| | |||    ||| |||||||||||||||| ||||||||   | |||||| |||||||    
T  43095733 aatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgacttagattttatcatatcatttgtag--gtattttgtagttgtat 43095830  T
Q  212 gttattaacttgggtgatgtga 233  Q
    | |||||| |||| ||||||||    
T  43095831 gctattaatttggatgatgtga 43095852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 868180 - 868257
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| |||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca 868257  T

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Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 10389744 - 10389619
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcg 205  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| ||| | ||  |||||||||||| | ||||||||||  || || ||    
T  10389744 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccgatcactttaattttatcatatatttttgtagaca--ttatgccg 10389647  T
Q  206 ttgtatgttattaacttgggtgatgtga 233  Q
    || |||| ||||||||||| || |||||    
T  10389646 ttatatgctattaacttggatgctgtga 10389619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 85  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| ||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

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Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 34024508 - 34024433
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| || |||||||||||||||||   |||| |||||||| || |||| ||| ||||||||||||    
T  34024508 tgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaaagatc 34024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

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Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 52978884 - 52978968
Alignment:
Q  147 aagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||  | ||| ||||||||||| |||||||||||||   | ||||||| |||||| |||||||||||| || |||||    
T  52978884 aagcatgggtatttcggtgacttagattttattatattatttgtag--ttattttgtcattgtattttattaacttggatggtgtga 52978968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 3336230 - 3336152
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtg-acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||||  ||| | |||||||||||||||   ||||||||||||| || |||| ||| |||||||||||    
T  3336230 tgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagat 3336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 5119371 - 5119421
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| | |||||| |||||| |||| ||||||||||||    
T  5119371 gtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaagatc 5119421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 12265553 - 12265599
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 154  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  12265553 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 12265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| ||| | ||||||||||||||   ||||||||| ||| || |||| ||  ||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 22806571 - 22806751
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    |||||| |||| ||||  |||||| |||| || |||||||| | |||||| |||   |||| ||||| |||||||||||||||||||||  | |||| ||    
T  22806571 gttgttcgattgtgtggtttgttgtggtgttcttttggttccttttgaaatatcggattcaatcaattatagattcaatcaatgatttggacatcaatgt 22806670  T
Q  136 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
    ||||      |||||||   ||||  | ||| ||| || |||||||||||||||||  ||  |||||| ||||||||||||||||||||    
T  22806671 tgta------gaagcataaatatttcggtgacttatatattatcatattatttgtaagca--ttttgttgttgtatgttattaacttgg 22806751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 28834295 - 28834241
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||| ||||||||||||    |||||||||||||||||||| ||||    
T  28834295 gttgtttgattttctgtcttgttgcgaaattcgtttggttcttattgaaacatca 28834241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 37684014 - 37684081
Alignment:
Q  164 tgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||| ||||||||||||||| ||||  |||||||||||| || ||||||| | |||| |||||    
T  37684014 tgatttagattatatcatattatttgttgaca--ttttgtcgttgtgtgctattaacctaggtgttgtga 37684081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| ||| | ||||||||||||||   ||||||||| ||| || |||| ||  ||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||||| ||| | ||| |||||||||   |||||||||||||| |  |||| ||| |||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 11299953 - 11299895
Alignment:
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| |||| ||||||  | |||| ||||||||||||||||||| |||||    
T  11299953 ttttatcatattattcgtaggcatttt--ggcgttttatgttattaacttgggtgttgtga 11299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 43353629 - 43353584
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgtt 58  Q
    ||||||||||||||| ||||| |||||||||||||| | |||||||    
T  43353629 tgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgtt 43353584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 53616721 - 53616644
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 4821080 - 4821125
Alignment:
Q  172 attttatcatattatttgtagacattttttgtcgttgtatgttattaa 219  Q
    ||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  4821080 attttatcatattatttgtagaca--ttttatcgttgtatgtaattaa 4821125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 9283929 - 9284005
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||| ||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  9283929 tgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 34024428 - 34024352
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | | ||||  ||||||||||||    
T  34024428 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccggtcattttaattttatcatat 34024352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||   ||||||| || |||| ||| ||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 24582938 - 24583157
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||| ||| || ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||    
T  24582938 tgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagatt 24583036  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||||| |||||| |  ||||||| ||||||||||| ||||||||||||||||| ||  ||||| |||||||    
T  24583037 caatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagattatatcatattatttgtaggca--ttttgccgttgta 24583134  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || ||||||||||||||||||||    
T  24583135 tgatattaacttgggtgatgtga 24583157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47132880 - 47133110
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||| | ||| | |||||||| |||| | |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||    
T  47132880 agtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtca 47132979  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| |||||||||| ||||||||  ||||||| ||| ||||||||||||||| |||||||| |||||||||||| |||||||| ||||||| ||  |||    
T  47132980 atcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggca--ttt 47133077  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| ||||||||||| || |||||    
T  47133078 tgccgttatatgctattaacttggatgttgtga 47133110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 48750158 - 48750392
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| ||||||||||||||| |  |||| |    ||||||| ||||||| ||| ||||||||||||| |||||    
T  48750158 agtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatcagcttca 48750257  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||| ||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||||| |||||||||||||||| ||     
T  48750258 gacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttcatcatattatttgtaggca- 48750356  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||| ||||||||| |||||||||||||| |||||    
T  48750357 -ttttgccgttgtatgctattaacttgggtgttgtga 48750392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 49626901 - 49627120
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | |||||||||||||    ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| | |||    
T  49626901 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacaaatt 49626999  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||| | |||||| | |||||||||||||||||||| |||||| |||||||||||||  ||||| |||||||    
T  49627000 caatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagattatatcatcttatttgtagaca--ttttgccgttgta 49627097  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||| ||||||| |||||    
T  49627098 tgctattaatttgggtgttgtga 49627120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 187
Target Start/End: Original strand, 16262872 - 16263024
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 134  Q
    ||||||||||||| | ||||||||| |||| ||||||| ||| |||||||| |||| || || ||||||| | |||||||||||||||||||| ||||||    
T  16262872 cgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacg 16262971  T
Q  135 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  16262972 ttgcagatccggaagcatgagtattctgatgatttagattttatcatgttatt 16263024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 5983816 - 5984043
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   |||||| ||||||||| |||||| | |||| |||| ||||||||||||  | ||| |||    
T  5983816 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtca 5983912  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| ||||||||| || |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  5983913 attacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggca--ttt 5984010  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||||||||||||||||    
T  5984011 tgtcgttgtatgctattaacttgggtgatgtga 5984043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 44543260 - 44543479
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||| |  || | ||||||||||||| |  |||| |||||||| ||||| ||||| ||||||||||||| ||| | ||||||| |||||    
T  44543260 tgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgtt-ggttcatattgaaagatcagctttagtcaatcacagatt 44543358  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||  ||||||||||| ||||||||||||||||| ||  ||||| |||| ||    
T  44543359 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagattatatcatattatttgtaggca--ttttgccgtttta 44543456  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  44543457 tgctattaacttgggtgctgtga 44543479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 19060897 - 19061116
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||||| |||||||||||||    ||||||||| ||| ||||| ||||| ||||||||||| | ||||| ||||||| || ||    
T  19060897 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttcgtt-ggttcatattgaaagattagcttcagtcaatcacaggtt 19060995  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    |||||||| |||||  | |||| ||||||||||| |||| | | |||||||| ||||||||||| ||||||||||||||||| ||  ||||| |||||||    
T  19060996 caatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgccgttgta 19061093  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || ||||||||||| || |||||    
T  19061094 tgctattaacttggatgttgtga 19061116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 14872620 - 14872846
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||  ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| || ||| ||||| |||||||||||  | ||| |||    
T  14872620 agtgcggcattgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttagttct-attgaaagatcgacatcagtca 14872715  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| ||||||||||||||||||||| || ||| |||| |||||||||||||||||||| ||  |||    
T  14872716 attacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggca--ttt 14872813  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| ||||||||||| || |||||    
T  14872814 tgccgttgtatgctattaacttggatgctgtga 14872846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21947730 - 21947503
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||| ||||||||||||||||||||| |   ||||  ||||||||| | ||||||| |||||| | |||| |||||||||||||||||  | ||| |||    
T  21947730 agtgcagcgctgtgttgttcgtcgtctcg---gacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtca 21947634  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||  ||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  21947633 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggca--ttt 21947536  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||||||| |||||||||||||||||||||    
T  21947535 tgccgttgtattttattaacttgggtgatgtga 21947503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 34413199 - 34412977
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||| ||  ||||||||||||| || ||  |||||| |    
T  34413199 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcaca 34413100  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||||||||| ||  |  |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||  |||||  ||    
T  34413099 aattcaatcaataat--ggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggca--ttttgcggt 34413004  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||| |||||    
T  34413003 tgtatgttattaacttgggtgttgtga 34412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 36775760 - 36775595
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| ||||||||||||  |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| ||| ||||||||| | | ||    
T  36775760 tcgtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtg 36775661  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||| |||||||||||||||| ||  ||||| ||||||||| ||||||||||| || |||||    
T  36775660 atttagatttcatcatattatttgtaggca--ttttgccgttgtatgctattaacttggatgttgtga 36775595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 37720204 - 37720065
Alignment:
Q  61 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||| | ||||| | ||||||||| |||||||||||| ||||||  ||||||||||||||    
T  37720204 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtattc 37720105  T
Q  161 tgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | ||||||||||||||||||||||||||| |||||||    
T  37720104 tggttatttagattttatcatattatttgtaggcattttt 37720065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 44915655 - 44915846
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||| || |||| |||||| |||||| |||| ||||||||||||| | ||| ||||| | | ||||||||||||||||| ||||||| |||| |    
T  44915655 tttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgca 44915754  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||| |||||  | |   ||||||||||||||||||||||||| ||  ||||| ||||||||| |||  |||||||||||||||    
T  44915755 gatccggaagcatgagtatttcggtttcttagattttatcatattatttgtaggca--ttttgccgttgtatgctatcgacttgggtgatgtga 44915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 41994406 - 41994595
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 102  Q
    ||||||| |||||||||| |||||| |||   ||||||||||||| |  |||||||| |||| |||||| |||| |||||||||||||  |||| |||||    
T  41994406 tgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaat 41994505  T
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    || | ||| |||||||||||||  |||||||||||   ||||||||| | | |||||||| |||||||||||||||||| ||||||||||    
T  41994506 caaatatttaatcaatgatttggacgtcaacgttgctaatccggaagaacgagtattctggtgatttagattttatcattttatttgtag 41994595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 12635148 - 12635368
Alignment:
Q  2 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 101  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||  || |||| | |||| || |||||||| ||||||||||||| ||| | | ||    
T  12635148 gtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaa 12635247  T
Q  102 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttttt 201  Q
    ||| | |||||||||||||||||  ||||| | ||  | |||  |||||||||||||||||  |||||| ||||||||||||| |||  || ||  ||||    
T  12635248 tcacaaattcaatcaatgatttgcacgtcagcctttcatatcacgaagcatgggtattctggcgatttatattttatcatatttttttaaggca--tttt 12635345  T
Q  202 gtcgttgtatgttattaacttgg 224  Q
    ||||||||||| |||||||||||    
T  12635346 gtcgttgtatgctattaacttgg 12635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 3228297 - 3228475
Alignment:
Q  52 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagca 151  Q
    |||||| |||||| | |||| |||| ||||||||||||    ||| ||||| | | || |||||||||||||| |||||||||||| ||||||| || ||    
T  3228297 tcttgtcgcggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatca 3228396  T
Q  152 tgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtg 232  Q
    ||| ||||  |||||||||| |||||||||||||||||||| ||  ||||| |||| ||||||||||||||||||||||||    
T  3228397 tggatatttcgatgatttaggttttatcatattatttgtaggca--ttttgccgttatatgttattaacttgggtgatgtg 3228475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 18939351 - 18939518
Alignment:
Q  55 tgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 154  Q
    |||||||||| || ||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||||||  |||| |||||| ||||| |||||||||     
T  18939351 tgttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgt 18939449  T
Q  155 gtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
    ||||| || ||| ||||| ||||||| |||||||| || || |||||||||||||||| |||||||||||    
T  18939450 gtattttggtgacttagaatttatcaaattatttgcaggca-tttttgtcgttgtatgctattaacttgg 18939518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 7337775 - 7337580
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| |||  |||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  7337775 agtgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctacatcaatca 7337679  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | |||||| | |||||||||||||||||||| ||||||    
T  7337678 attacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcatttt 7337580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 25564066 - 25564198
Alignment:
Q  92 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||  ||||||| ||||||| ||||||| ||||| ||||||    
T  25564066 cttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatattgtttgta 25564165  T
Q  192 gacattttttgtcgttgtatgttattaacttgggt 226  Q
    |  || |||||| ||||||||||||||||||||||    
T  25564166 g--atattttgttgttgtatgttattaacttgggt 25564198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 45789558 - 45789747
Alignment:
Q  41 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 140  Q
    ||||||||  || |||||||| || | ||||||||| |||||||| |||| ||| | ||||| | ||||||||||||||||||| ||||| |||||||||    
T  45789558 ttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtag 45789657  T
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtg 232  Q
    ||||||||||||| | |||    ||| ||||| ||||| |||||||||||||  |  ||||||| ||||||| |||||||||||||| ||||    
T  45789658 atccggaagcatgtgcatttctttgacttagaatttattatattatttgtaggaa--ttttgtcattgtatgctattaacttgggtgttgtg 45789747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35484503 - 35484276
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| |||   |||  |||| ||| | ||||||| |||||| | |||   ||| ||||||||||||  | ||| |||    
T  35484503 agtgcggcgttgtgttgttcgtcgtcttgtg---cgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctacatcaatca 35484407  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| ||||||| |||||||||||||  | |||||| | |||||||||||||||||||  ||  |||    
T  35484406 attacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgtaagca--ttt 35484309  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  35484308 tgccgttgtatgctattaacttgggtgttgtga 35484276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16161811 - 16162003
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||||    |||| |    ||||||| ||||||||||| ||||||||||||| ||| |    
T  16161811 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttaa 16161910  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||| ||||||||||| |||||||||||          |||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  16161911 gacaatcacaaattcattcaatgatttgggcgtcaacgtt----------aagcatgggtattctgctgatttagattttatcatattatttgtaggcat 16162000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 31984247 - 31984368
Alignment:
Q  110 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgt 209  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||  | ||| |||| |||||||||||||||| ||  ||  ||||||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagca--ttttgtcgttgt 31984344  T
Q  210 atgttattaacttgggtgatgtga 233  Q
    ||| |||||||||||||| |||||    
T  31984345 atgctattaacttgggtgttgtga 31984368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 34878386 - 34878163
Alignment:
Q  5 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    ||||| ||||||||||||||||| |||   || |||||||||| | || |||| |||||| | |||   ||| ||||||||||||  | ||| ||||| |    
T  34878386 cggcgttgtgttgttcgtcgtcttgtg---cggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtcaatta 34878290  T
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg-ggtattctgatgatttagattttatcatattatttgtagacattttttgt 203  Q
     | |||||| |||||||||| |||||||||||| ||||||||||||||| | ||||| | ||| |||| |||||||||||||||||||| ||  |||||     
T  34878289 caaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcag-tgacttaggttttatcatattatttgtaggca--ttttgc 34878193  T
Q  204 cgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||| |||||||||||||| |||||    
T  34878192 cgttttatgctattaacttgggtgttgtga 34878163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7836908 - 7836681
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| ||||||   |||||| | ||||||| |||| | ||||||  ||| ||| ||||||||  | ||| |||    
T  7836908 agtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaaagatcgacatcagtca 7836812  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| | ||| ||| ||||| | |||  | ||| |||| |||||||||||||||||||| ||  |||    
T  7836811 attacaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttaggttttatcatattatttgtaggca--ttt 7836714  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| |||||||||||||| |||||    
T  7836713 tgccgttttatgctattaacttgggtgctgtga 7836681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 45415538 - 45415765
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| |||   | | ||||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  45415538 agtgcggcgttttgttgttcgtcgtcttgtg---catcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatca 45415634  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | | |||| ||||||||||  ||||||||||| |||||||||||||| ||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  45415635 attacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggca--ttt 45415732  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||  |||||| ||||||| |||||    
T  45415733 tgccgttgtataatattaatttgggtgttgtga 45415765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 24597348 - 24597250
Alignment:
Q  92 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 190  Q
    ||||| ||||| ||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||| | ||||| |||||||||||    
T  24597348 cttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtattctgattacttatactttataatattatttgt 24597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 31317821 - 31317943
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttg 208  Q
    |||||||||||||||| |||||||||||  ||| |||||||||||| ||||  | ||||||||| ||||||||||||||||||| ||  |||| ||||||    
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggca--ttttatcgttg 31317918  T
Q  209 tatgttattaacttgggtgatgtga 233  Q
     ||  ||||||||||||||||||||    
T  31317919 catcctattaacttgggtgatgtga 31317943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 233
Target Start/End: Complemental strand, 49648949 - 49648760
Alignment:
Q  41 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 140  Q
    |||||||| ||||||||||||||| |  |||||||||||| |||||||   |||||  |||| ||| ||||||| |||||||||||||||||||||||||    
T  49648949 ttgattttatgtcttgttgcggtgtttatttggttcttatcgaaagattgacttcaaccaattatacattcaattaatgatttgtgcgtcaacgttgtag 49648850  T
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||    | |||| ||||| |  | | ||| ||||||| |||||||||||| |||  ||||||  |||||||||||||| |||||||||||||    
T  49648849 atcgaagaacatgagtattttagtcactta-attttattatattatttgtaaaca--ttttgttattgtatgttattaatttgggtgatgtga 49648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 43412359 - 43412539
Alignment:
Q  9 gctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 108  Q
    |||||||||||| ||||||  || |||||| ||||| || ||||||  |||| ||| | ||||| ||| |||||||| |||   |||| ||||||  | |    
T  43412359 gctgtgttgttcatcgtcttttgcgacgttatttgagttcgtgtctaattgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcata 43412458  T
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 189  Q
    ||||||||||||||||   |||||||||| |||||| |||||||| ||||| || |||| |||||||||||||||||||||    
T  43412459 ttcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattttggtgatctagattttatcatattatttg 43412539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 9341716 - 9341894
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 112  Q
    ||||||||||||||| |||   |||||||||||| ||||||||||||||||| | ||||| ||| |||| ||  ||||  |||| ||||||| | ||||     
T  9341716 tgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatattaaactatcaa-ttcaatcaatcacatattcc 9341814  T
Q  113 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||||||| ||||  |||||||| || |||| | | ||||||  ||||||| ||| |||||||||||||||||||||||||    
T  9341815 atcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttagattttatcatattatttgtag 9341894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 6217925 - 6217717
Alignment:
Q  18 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 117  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||  | || |||||||||   ||||||||||||| ||||| ||||||| | ||||||||||    
T  6217925 ttcgttgtcttgtgcgacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaa 6217826  T
Q  118 tgatttgtgcgtcaacgttgtagatccggaagcatggg----tattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgt 213  Q
    |||||||   |||||| ||| | ||| | ||||||| |    ||| ||  |||||||||||||||||||||||||||||   | ||||  |||||||||     
T  6217825 tgatttggatgtcaacattgcatatctgtaagcatgagtgaatatcctcgtgatttagattttatcatattatttgtag--gtattttaccgttgtatgc 6217728  T
Q  214 tattaacttgg 224  Q
    |||||||||||    
T  6217727 tattaacttgg 6217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 27580238 - 27580057
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 102  Q
    ||||||| ||||||||||||||| | ||||| |    |||||||||| ||||||| |||||| || ||| |||| ||||||||||||  ||||| | |||    
T  27580238 tgcggcgttgtgttgttcgtcgtatcgtgtggc---atttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaat 27580142  T
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
     | | ||||||| ||||||||| |||||||| ||| |||| || ||||||| |||||  | ||| ||||||||||||||||||||    
T  27580141 tacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattatt 27580057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1742261 - 1742454
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| ||||||   |||||| | ||||||| | |||| ||||||  ||| ||||||||||||  | ||| |||    
T  1742261 agtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatcaatca 1742357  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| |||||||||| |||||||||||| ||||||| ||||||| | |||  | |||   || |||||||||||||||||||| ||||||    
T  1742358 attacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtga--caggttttatcatattatttgtaggcatttt 1742454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 10776573 - 10776346
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||||||||  || | ||||   ||||| || ||||||| |||||| ||||||  ||| | ||||||||||  | ||| |||    
T  10776573 agtgcggcgttgtgttgttcgtcgtcttatgcggcgtt---tgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaaagatcgacatcagtca 10776477  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | || ||||||||||||||  ||||||| ||| |||||| |||||||| |||||  | ||| |||| ||||||||| |||||||||| ||  |||    
T  10776476 attacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtaggca--ttt 10776379  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||  |||||||  |||||||||||||| |||||    
T  10776378 tgctgttgtattctattaacttgggtgctgtga 10776346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 23291719 - 23291527
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |  |||||| |||||| ||||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| || |||||||||     
T  23291719 gtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttga 23291620  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| | |||  | ||| |||| |||||||||||||||||  ||  | ||||| |||| |||| |||||||||||||| |||||    
T  23291619 agatccggaagcatgtgaatttcggtgacttaggttttatcatattatttg--gaggtattttgccgttttatgctattaacttgggtgctgtga 23291527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 224
Target Start/End: Original strand, 31919003 - 31919187
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| || ||| |||||| |||| | ||||||||||  | ||| ||||| | |  |||||||||||||||| || |||||||||     
T  31919003 gtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgc 31919102  T
Q  139 agatccggaagcatgggtattctgatgatttaga-ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
    |||||| ||||||||   |||    ||| ||||  |||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  31919103 agatccagaagcatgaaaatttcagtgacttagggttttatcatattatttgtagaca--ttttgtcgttgtatgctattaacttgg 31919187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 14489401 - 14489472
Alignment:
Q  153 gggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    |||||||||| |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||||||    
T  14489401 gggtattctggtgatttagattttatcatattatttgtag--gtattttgttgttgtatgttattaacttgggt 14489472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 15431674 - 15431551
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||||| |||||||||||| ||||| || ||||| | ||||    |||  |||||||||||||||||||||||||||  |||| |||||    
T  15431674 attcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacatagattttatcatattatttgtagaca--ttttatcgtt 15431577  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| |||| |||||| || |||||    
T  15431576 gtatgctattcacttggatgttgtga 15431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 24583278 - 24583353
Alignment:
Q  156 tattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| ||||||||||| ||||||||||||||||| ||  ||||| ||||||||| ||||||||||||||||||||    
T  24583278 tattctggtgatttagattatatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgatgtga 24583353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 34528707 - 34528829
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||  ||||||||||||||||| | | |  |||||||||||| |  ||||||| ||||| |  |||||||  ||||||||||||| ||||| |||    
T  34528707 agtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatcaacttcagtca 34528806  T
Q  101 atcatagattcaatcaatgattt 123  Q
    |||| ||||||||||||||||||    
T  34528807 atcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 15492373 - 15492454
Alignment:
Q  110 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||||||||||||| ||||||  |||| |||||| | ||||||| |||| || ||||||||||||||||||||||||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatattatttgta 15492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 32679159 - 32679058
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    ||||||| |||||||||| ||||||||  || |||| ||| | ||||||||||||| ||||| || |||||||||||| |||||||| ||||||| ||||    
T  32679159 tcaatcacagattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggcatt 32679060  T
Q  198 tt 199  Q
    ||    
T  32679059 tt 32679058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 32395047 - 32395199
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||| || |||||||||||||  | ||| |||      
T  32395047 gttcctattgaaagatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaag 32395146  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    |||||||||||||||| ||| ||  ||||| || |||||| ||||||||||||||    
T  32395147 ttttatcatattatttataggca--ttttgccgctgtatgctattaacttgggtg 32395199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 32873914 - 32873784
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    |||||| |||| ||||||| || |  ||||| ||||| | | ||| ||||||||||||  ||||||| |||| |||||| ||| ||||||||||  |||     
T  32873914 tcgtttagttcctattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttcgatc 32873815  T
Q  166 atttagattttatcatattatttgtagacat 196  Q
    | || ||||||||||||||||||||||||||    
T  32873814 actttgattttatcatattatttgtagacat 32873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| ||||| |||||||||||||   |||||||||||||| || |||| ||| ||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 31692568 - 31692392
Alignment:
Q  14 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaa 113  Q
    |||||| ||||||| ||| |  ||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||| | ||| | ||||| | | ||| ||    
T  31692568 gttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttcg-ttggttcatattgaaagattagctttagtcaataacaaatttaa 31692470  T
Q  114 tcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||||||||    ||||| |||||||||||| ||| |||  |||| || ||| ||  |||||||||||| |||||||    
T  31692469 tcaatgatttcgatgtcaatgttgtagatccgaaagtatgcatattttggtgaattttattttatcatataatttgta 31692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 50616713 - 50616592
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    |||||||| |||| ||||| | | ||| | ||| || |||||||||| | || |||||| ||||| |||||||||| ||||| |  ||||||| ||||||    
T  50616713 tattgaaatatcaacttcaattagtcagatatttaaccaatgatttgagtgttaacgttatagatacggaagcatgagtatttttgtgatttaaatttta 50616614  T
Q  178 tcatattatttgtagacatttt 199  Q
    |||||||||||||||| |||||    
T  50616613 tcatattatttgtagatatttt 50616592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 50624540 - 50624419
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    |||||||| |||| ||||| | | ||| | ||| || |||||||||| | || |||||| ||||| |||||||||| ||||| |  ||||||| ||||||    
T  50624540 tattgaaatatcaacttcaattagtcagatatttaaccaatgatttgagtgttaacgttatagatacggaagcatgagtatttttgtgatttaaatttta 50624441  T
Q  178 tcatattatttgtagacatttt 199  Q
    |||||||||||||||| |||||    
T  50624440 tcatattatttgtagatatttt 50624419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 51916737 - 51916599
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | ||||||| |||||  |||||| |||| ||||||||||  | | ||| ||||| | | ||||||||||||||||| |||||||||||| |    
T  51916737 tttgatttcgcgtcttgtcgcggt--tcgtttagttcctattgaaaga--aacgtcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgca 51916642  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatat 183  Q
    ||| |||||||||| ||||| |  ||| ||||||||||||||||    
T  51916641 gatacggaagcatgagtatt-tcgtgacttagattttatcatat 51916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 8211918 - 8211835
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||||| ||||||| || ||||||| |||| |||||||||||||||||||||   |||| |||| ||||||||||||||||||||    
T  8211918 attcaaccaatgatctg-gcgtcaatgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtag 8211835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 4413210 - 4413289
Alignment:
Q  120 atttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||| |||||||||||| |||||||||||||||  ||||  | ||| |||| |||||||||||||||||||| ||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcatttt 4413289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 13075663 - 13075580
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||||||||||||||  | | |||||||| ||||||| |  |||| |||||||  ||||||||||||||||||||||||||||    
T  13075663 attcaatcaatgatttaggaggcaacgttgcagatccgaagacatgagtattctagtgatttagattttatcatattatttgta 13075580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 16989455 - 16989578
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||| ||||| ||||||| |||| |||||||||| |||| | |||    ||| |||| |||||||||||||||||||| ||  ||||| ||||    
T  16989455 attcaaccaataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttaggttttatcatattatttgtaggca--ttttgccgtt 16989552  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
     |||| |||||||||||||| |||||    
T  16989553 ttatgctattaacttgggtgctgtga 16989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 21686857 - 21687002
Alignment:
Q  5 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    ||||| ||||||||||||||||| ||| | ||||   |||||||| || |||| |||||| | |||   ||| |||||||||||   | ||||||||| |    
T  21686857 cggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagataggcatcactcaatta 21686953  T
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 153  Q
     | |||||| |||||||||| |||||||| ||| |||||||||||||||    
T  21686954 aaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatg 21687002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 26535437 - 26535503
Alignment:
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 178  Q
    ||||||||||||| || ||||||||| ||||||||||||||| |||||| | ||| |||||||||||    
T  26535437 aatcaatgatttgggcttcaacgttgcagatccggaagcatgagtattccggtgacttagattttat 26535503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 11462457 - 11462367
Alignment:
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||| ||||||||||  | ||| |||  ||||||||||||||||||||  |||||  ||||||||||| |||||||||||||| |||||    
T  11462457 atccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggaatttt--gtcgttgtatgctattaacttgggtgctgtga 11462367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 39888236 - 39888378
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  ||||| ||||| | |  |||||||||||||||| ||||| ||||||||||||||   |||  ||||||  | ||| ||||||||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgacttagatttta 39888335  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaactt 222  Q
    ||||||| ||| ||  ||  |||| |||||||||| |||||||||    
T  39888336 tcatattctttatatgca--ttttatcgttgtatgctattaactt 39888378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 50166089 - 50166013
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| ||||||  ||||||||||||||||||||| | ||||||||||||| ||| ||  ||||||||||||    
T  50166089 attcaatcaaagatttggacgtcaacgttgtagatccggaggccatgggtattctggtgactttaattttatcatat 50166013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 51871873 - 51871949
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| ||||||||||| ||||  ||||| |||||||| || |||  ||||||||||||||||    
T  51871873 tgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatc 51871949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 1602084 - 1602225
Alignment:
Q  18 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 117  Q
    ||||||||||  || |||||||||||||||||  ||||||||||| | ||||||| ||  ||||||||||||  ||| | ||||| | |  |||||||||    
T  1602084 ttcgtcgtcttctgcgacgttgtttgattttgcatcttgttgcggcgttcgtttgatttctattgaaagatcgactt-agtcaattacaatttcaatcaa 1602182  T
Q  118 tgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    ||||||  || |||| |||| | ||||||||||| | ||||||    
T  1602183 tgatttaggcatcaatgttgcatatccggaagcacgtgtattc 1602225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 30506276 - 30506167
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| ||||||| |||| || ||| ||||||||| |||  ||||||||| ||||||| ||| ||||||||||||  ||| | |||||   |||||    
T  30506276 tgtgttgttagtcgtcttgtgtaacattgattgattttgcgtcc-gttgcggtgttcgtttgcttcctattgaaagatcggcttgaatcaattgcagatt 30506178  T
Q  111 caatcaatgat 121  Q
    |||||||||||    
T  30506177 caatcaatgat 30506167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 34529214 - 34529281
Alignment:
Q  164 tgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| ||||||||| ||||||||||| |||||||  | |||||||  ||||||||||||||||||||    
T  34529214 tgatttaaattttatcacattatttgtaggcattttt--ttgttgtatactattaacttgggtgatgtga 34529281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 48365838 - 48365760
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| ||| |||  ||||||||||||||| |||||||| |||||| || |||| ||| ||||||| ||||    
T  48365838 tgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcatattgaaggatc 48365760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 51373802 - 51373743
Alignment:
Q  172 attttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||| |||||    
T  51373802 attttatcatattatttgtaggcatttt--gtcgtcgtatgctattaacttgggtgttgtga 51373743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 14545608 - 14545684
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| |||||| |||||||||||| ||||||||| | |||| |||||| ||| ||||  ||||||||||||    
T  14545608 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgagtattccgatcattttaattttatcatat 14545684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 39987480 - 39987532
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||||||||| || ||| |||||||||||| ||||||||| ||||||||||||    
T  39987480 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattc 39987532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 49504601 - 49504480
Alignment:
Q  110 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgt 209  Q
    |||| ||||||||||   |||||||||| ||||||||||||||| || ||  | |||||| | ||||| |||| ||||| ||| ||  ||||  ||||||    
T  49504601 tcaaacaatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggttttaacataatatttttaggca--ttttaccgttgt 49504504  T
Q  210 atgttattaacttgggtgatgtga 233  Q
    ||| |||||||||||||| |||||    
T  49504503 atgctattaacttgggtgctgtga 49504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 13144820 - 13144729
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||||||||||  ||||||  ||| ||||| | ||||||| |||||    ||| ||||||||||||||| ||||||||| ||||||    
T  13144820 attcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtaggcatttt 13144729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 27456555 - 27456646
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtc 130  Q
    ||||||||| | ||||||| |||||| |||||| |||| ||||||||||||  | ||| ||||| | |  |||||||||||||||| |||||    
T  27456555 gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 27872748 - 27872799
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 64  Q
    ||||||||||||||| ||  |||||||||||||||| |||||| ||||||||    
T  27872748 tgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtg 27872799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 44637429 - 44637508
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    |||||||||||| |||| ||| ||||||||||| |||   |||||||| ||||| || |||| ||| |||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  15 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| ||| | ||||||||||||||  || ||| ||||||| || |||| ||| ||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 46399122 - 46399177
Alignment:
Q  176 tatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||| || |||||||  || |||||||||||||||||||| ||||||||    
T  46399122 tatcatattatttataaacatttt--gttgttgtatgttattaacttggatgatgtga 46399177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 799866 - 799813
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||| ||| |||||| |||||||| || |||||||| ||||||||||||    
T  799866 gttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatc 799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 7312153 - 7312100
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  7312153 gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 7312100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 40163602 - 40163509
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    |||||| |||||||||| |||  || || ||||||| || || ||||||||||| | ||||||||  ||||| ||||||| ||||| |||||||    
T  40163602 tgtgttcttcgtcgtcttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaatca 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 5856001 - 5856106
Alignment:
Q  116 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtta 215  Q
    |||||||||||||||||| ||| || |  ||| |||| |||||||  || | ||  |||||| ||||||||||||||| |  ||||| ||||||||| ||    
T  5856001 aatgatttgtgcgtcaacattgcaggtttggatgcattggtattccaatcactttaattttaccatattatttgtagaaa--ttttgccgttgtatgcta 5856098  T
Q  216 ttaacttg 223  Q
    ||||||||    
T  5856099 ttaacttg 5856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 30879086 - 30879161
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  30879086 tgttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 30879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 35462038 - 35461978
Alignment:
Q  127 cgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
    ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||    
T  35462038 cgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaagttttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 50377467 - 50377524
Alignment:
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||||||||||||| | ||||| |||||||   ||| ||||||||||||||||||||    
T  50377467 ttagattttatcatattgtctgtaggcattttt--ccgtcgtatgttattaacttgggtg 50377524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 51868716 - 51868640
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||| |||   ||||| |||||||| || |||  ||||||||||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatc 51868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10929648 - 10929879
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgttt-gattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 99  Q
    ||||||| | ||||||||||||||||| ||  |||||||||| ||||| | |||||||||||||| ||||||||||| | |||||| |||| ||||| ||    
T  10929648 agtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttcagtc 10929747  T
Q  100 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||| |||||||||||||||||||  | ||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||| ||  ||    
T  10929748 aatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggca--tt 10929845  T
Q  200 ttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||| ||| ||||||||||| || |||||    
T  10929846 ttgttgttgaatgctattaacttggatgctgtga 10929879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 10237267 - 10237102
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| ||||||||||||| |||||  |||||| | |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||    
T  10237267 tcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatg 10237168  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||| |||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  10237167 atttagatttcatcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggtgttgtga 10237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 14955570 - 14955743
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| |||||||| ||||||||||   ||||||| ||||||||||||||||| |||||||||||| |||||| ||| |||| |||    
T  14955570 tgcggtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgta 14955669  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||| |||| |||||    
T  14955670 ttctgatgatttagattttatcatattatttgtagaca--ttttatcattgtatgttattaacttaggtgttgtga 14955743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 32448724 - 32448502
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||    
T  32448724 tgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagatt 32448626  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttag---attttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||   ||| ||||||||||||||||| ||  ||||| ||||    
T  32448625 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattattatatcatattatttgtaggca--ttttgccgtt 32448528  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||||| || |||||    
T  32448527 gtatgctattaacttggatgttgtga 32448502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 4904258 - 4904031
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||| ||||||   ||||||||||||||||||||||| ||||||||||| ||||||||||||  | ||| |||    
T  4904258 agtgtggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgacatcagtca 4904162  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | ||||||   |||||||| | |||||||||| |||||| ||||||||| ||||  | ||| ||||||||||||||||||||||||||||  |||    
T  4904161 attacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtagaca--ttt 4904064  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||||||| || |||||    
T  4904063 tgtcgttgtatgctattaacttggatgttgtga 4904031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 17249252 - 17249033
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||| |||| |||| |  ||||||||||||| | ||| ||||| |||||||||||||  |||| ||||||| |||||    
T  17249252 tgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgtt-ggttcatattgaaagatcagtttcagtcaatcacagatt 17249154  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| ||||||  ||||| | |||||||| ||||||||||| ||||||||||||||||||||  ||||| |||||||    
T  17249153 caatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattatatcatattatttgtagaca--ttttgccgttgta 17249056  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  17249055 tgctattaacttgggtgctgtga 17249033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 25509146 - 25508954
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||||||||||| |||||| |||||| ||||  |||||||||||| | ||| ||||| | | |||||||||||||| || ||||||||||||     
T  25509146 gtttgattttgtgtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttgc 25509047  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    | |||||||| ||||||||||  ||||| |||||||||||| |||||||||||| ||  ||||| ||||||||||||||||||||||||||||||    
T  25509046 aaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtaggca--ttttgccgttgtatgttattaacttgggtgatgtga 25508954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 23933700 - 23933512
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||  |||||||||    
T  23933700 gttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgt 23933601  T
Q  136 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    |  | ||| |||||||||| || |||| |||||||||||||||||||||||||||||  |  ||||| ||||||| | |||||||||||||    
T  23933600 tacatatctggaagcatggataatctggtgatttagattttatcatattatttgtaggaa--ttttgccgttgtaagctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 3308986 - 3309159
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||  |||||||| |||| |||||  |||||| | ||||||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  3308986 tgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggta 3309085  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||| |||| |||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  3309086 ttctggtgatttatatttcatcatattatttgtagtca--ttttgccgttgtatgctattaacttgggtgctgtga 3309159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29574744 - 29574546
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | | |||||||||||    | ||||||| ||| | ||||| ||| ||||||||||| | ||||| |||    
T  29574744 agtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagcttcagtca 29574645  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| |||||||||||||||||||  || |||||||| |||||||||||||||  |||| ||||||||||||||| |||||||| ||||||| ||||||    
T  29574644 atcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttcatcatattttttgtagtcatttt 29574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 37416704 - 37416918
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| |||||||||||||||    ||||||||   || ||| ||||||| |||||||| |||| ||  | ||||||| |||||    
T  37416704 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatcacagatt 37416803  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||   |||||| ||| ||  ||||||||||| |||||||  ||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  37416804 caatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatattttatcatattatttgtagaca--ttttgccgttgta 37416901  T
Q  211 tgttattaacttgggtg 227  Q
    |||| ||||||||||||    
T  37416902 tgttgttaacttgggtg 37416918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 24461434 - 24461657
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgatt---ttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatag 107  Q
    |||||||||||| || | ||| | ||||||||||||   ||| | |||||||||||| ||||||||||| ||||||||||||| ||||| |||| || ||    
T  24461434 tgtgttgttcgttgttttgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacag 24461533  T
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||||| ||||||||  || |||||||| ||||||||||||||  ||||| || |||||||||||| |||||||| |||||||   | ||||||||||    
T  24461534 attcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgatttagatttcatcatattttttgtag--gtattttgtcgtt 24461631  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
     |||| ||||||||| |||| |||||    
T  24461632 atatgctattaactttggtgttgtga 24461657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 28534060 - 28533840
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||| ||||| ||| |||||||||||||||    ||||||||||||| ||||||| ||| ||||||||||  | ||||||||||||| |||||    
T  28534060 tgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagatt 28533961  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    |||| |||||||||  ||||||| ||| | |||  ||| ||| | ||||| | |||||| ||||||||||||||||||||||   | |||||||||||||    
T  28533960 caataaatgatttggacgtcaactttgcaaatctagaaacattgatattcgggtgatttggattttatcatattatttgtag--gtattttgtcgttgta 28533863  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||| ||| |||||    
T  28533862 tgctattaacttgagtgttgtga 28533840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 1421737 - 1421890
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | |||||||| |||||    
T  1421737 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttta 1421836  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  1421837 tcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggtgttgtga 1421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 19595975 - 19595828
Alignment:
Q  45 ttttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatcc 144  Q
    ||||||||||||||||| || | |||| |||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| |||||||  |||  ||||     
T  19595975 ttttgtgtcttgttgcgatgtttgtttagttcttattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaaaattgccgatct 19595876  T
Q  145 ggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||||    
T  19595875 ggaagcatgaatattttgatgattttgattttatcatattatttgtag 19595828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 17151445 - 17151628
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |  ||||||| ||||| ||||||| ||| |||||||||||||  |||| ||||| | ||||||||||||||||||| ||||| |||||||    
T  17151445 gtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgt 17151544  T
Q  139 agatccggaagca-tgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttg 223  Q
    ||||||||||||| ||||||||  | ||| || || |||||||||||||| ||||   | |||||| |||||||| ||||||||||    
T  17151545 agatccggaagcattgggtatttcggtgacttggaatttatcatattattagtag--gtattttgttgttgtatgctattaacttg 17151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 4264472 - 4264664
Alignment:
Q  14 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaa 113  Q
    |||||||||||||| |||   || |||||||||| | ||||| |||||||| || |||||||||||||||||||||| ||||| ||||| | ||||| ||    
T  4264472 gttgttcgtcgtcttgtg---cggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaa 4264568  T
Q  114 tcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtat 211  Q
    ||||||||||  | ||||| |||  | ||| |||||||||||||||  ||||| ||  | ||||||||||||||||||| ||  ||||||||||||||    
T  4264569 tcaatgatttaggagtcaatgttccaaatctggaagcatgggtatttcgatgacttcaaatttatcatattatttgtaggca--ttttgtcgttgtat 4264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 16375960 - 16376153
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    ||||||||||  |||| |||||||||  ||||||||||| |||||||||| ||    || ||| ||| ||||||||||||||||||  ||||||| ||||    
T  16375960 tgtttgatttcatgtcctgttgcggtattcgtttggttcctattgaaagaccaaaaccagtcagtcacagattcaatcaatgatttcggcgtcaaagttg 16376059  T
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     |||| |  ||||||| ||||| |||||||||| ||||||||||||||||||||| ||  |||||  ||||||||  |||||||||| ||||||||    
T  16376060 cagattcaaaagcatgtgtattatgatgatttaaattttatcatattatttgtagtca--ttttggtgttgtatgcgattaacttggatgatgtga 16376153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 34128788 - 34128579
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 112  Q
    ||||||||||||||| ||| |||||||||||||| || ||||||||| |||| | ||||||||| |||| |||||||  ||| | || || ||| |||||    
T  34128788 tgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaagatcgactttagtcgattataaattca 34128689  T
Q  113 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatg 212  Q
    |||||| ||||| ||||||| |||| | ||| | || | ||||||||  ||| | || |||||||||||||||||| ||| ||  ||||||||  |||||    
T  34128688 atcaattatttgggcgtcaatgttgcatatctgaaatcttgggtatttcgattacttggattttatcatattatttataggca--ttttgtcgcagtatg 34128591  T
Q  213 ttattaacttgg 224  Q
    ||||||||||||    
T  34128590 ttattaacttgg 34128579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 233
Target Start/End: Complemental strand, 12554254 - 12554067
Alignment:
Q  44 attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatc 143  Q
    ||||||||||| ||||||||| ||||||| ||| |||||||| |||| ||||| ||||| | ||||||||||||||||||| | ||  || ||| | ||     
T  12554254 attttgtgtctagttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatt 12554155  T
Q  144 cggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||||||| |||||    | | |||| |||||||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  12554154 tggaagcatgagtatttcagtaacttaggttttatcatattatttgtaggca--ttttgtcgttgtatgatattaacttgggtgttgtga 12554067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 30400112 - 30399921
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    ||||||||||  || ||| |||||| |||||| |||| ||||||||||||| ||||| ||||| | | ||||||||||||||||| |||||||||||| |    
T  30400112 tttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgca 30400013  T
Q  140 gatccggaagcatgggtattctga-------tgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    |||||| ||||||| ||||| |||       ||| ||||||||||||||||||||||||| ||  ||||| ||| |||||| |||||||| ||||    
T  30400012 gatccgaaagcatgagtatt-tgatttttagtgacttagattttatcatattatttgtaggca--ttttgccgtcgtatgtcattaacttaggtg 30399921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37876719 - 37876495
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | | ||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  | ||| |||    
T  37876719 agtgcggcgttttgttgttcgtcgtcttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtca 37876623  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||| ||| || ||||||||| ||||||| |||||||||||||  | ||| ||| ||||||||||||||||||||| ||  |||    
T  37876622 attacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggca--ttt 37876525  T
Q  201 tgtcgttgtatgttattaacttgggtgatg 230  Q
    || ||| ||||| |||||||||||||||||    
T  37876524 tgccgtcgtatgctattaacttgggtgatg 37876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5427981 - 5427755
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||||| ||||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  | ||| |||    
T  5427981 agtgcggcgttttgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatctacatcagtca 5427885  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||| |||||||||||||||| ||||||||||| ||| |||||    ||| |||| ||||||||||||||||| |  ||  |||    
T  5427884 at-acaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagca--ttt 5427788  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    | |||||||||| |||||||||||||| |||||    
T  5427787 tatcgttgtatgctattaacttgggtgctgtga 5427755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 18763455 - 18763682
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| | ||||   |||||| | ||||| |  ||||| |||||| |||| ||||||||||||  | ||| |||    
T  18763455 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggcatcaatca 18763551  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||| ||||| |||||||||||  ||||||||||||||| | |||  | ||| |||| |||||||||||||||||||| ||  |||    
T  18763552 attacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggca--ttt 18763649  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| |||||||||||||| |||||    
T  18763650 tgccgttttatgctattaacttgggtgttgtga 18763682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 242
Target Start/End: Complemental strand, 19028991 - 19028791
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | |||||||  ||||| || ||| |||| ||||||||||||  ||||| ||||  | | ||||||||||||||||| |||||||||||| |    
T  19028991 tttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgca 19028892  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtgatattct 239  Q
     |||| ||||||||| ||||  | | | ||||||||||||||| ||||||||| |||||||  ||||| |||| |||||||||| ||| ||||| ||| |    
T  19028891 aatccagaagcatggatatttcggtaacttagattttatcatactatttgtaggcattttt--tcgttttatgctattaacttgagtgttgtgagattgt 19028794  T
Q  240 tcg 242  Q
    |||    
T  19028793 tcg 19028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 4778844 - 4778967
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  ||||| ||||    
T  4778844 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttttgccgtt 4778941  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||| |||||    
T  4778942 gtatgttattaatttgggtgctgtga 4778967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 6358979 - 6358767
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 108  Q
    ||||||||||||||||| |||   ||||||||||||| |  ||||||||  ||||| | ||||||||||||||||||||||| |||||  || ||| | |    
T  6358979 tgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcacaaa 6358880  T
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttg 208  Q
    ||||||| || ||||| |||||||||||| | ||        ||  ||||| || |||||||||||||||||||||||||||  || | |||||||||||    
T  6358879 ttcaatctataatttgggcgtcaacgttgcaaat--------at--gtattatggtgatttagattttatcatattatttgt--acgtattttgtcgttg 6358792  T
Q  209 tatgttattaacttgggtgatgtga 233  Q
    |||| |||||||||||||| |||||    
T  6358791 tatgctattaacttgggtgttgtga 6358767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37994263 - 37994498
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||| ||  ||  | | |||||||||||||  ||||||||| ||| || |||| ||| |||||||| |||| ||||| |||    
T  37994263 agtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtca 37994362  T
Q  101 atcatag-----attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagaca 195  Q
    |||| |      ||||||| |||||||||  ||||| ||||| ||||||||||| | |  ||||| | ||||||||||||||||||||||||||||| ||    
T  37994363 atcacatcacaaattcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtaggca 37994462  T
Q  196 ttttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
      |||||  ||| |||| |||||||||||||| |||||    
T  37994463 --ttttgctgttatatgctattaacttgggtgttgtga 37994498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 41694674 - 41694829
Alignment:
Q  70 ttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgattt 169  Q
    ||||||| | ||||||||||| |||||  |||| | | ||||||||||||||||| || ||||||||| |||| | ||||||||   |||||| ||| ||    
T  41694674 ttggttcctgttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgactt 41694773  T
Q  170 agattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||||||||||||||| ||| ||  |||||||||| |||||||||||||| ||||    
T  41694774 agattttatcatattatttataggca--ttttgtcgttatatgttattaactttggtg 41694829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 7677986 - 7677759
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||| |  ||||| | |||  |||| ||||||||||||  | ||| |||    
T  7677986 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctacatcaatca 7677890  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  | ||||||||| ||||||| |||||||||||||    ||| |||| |||||||||||||||| ||| ||  |||    
T  7677889 attacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggca--ttt 7677792  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  7677791 tgccgttgtatgctattaacttgggtgctgtga 7677759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 6436609 - 6436782
Alignment:
Q  16 tgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatc 115  Q
    |||||||||||| ||| ||||||   ||||||||  ||||||| ||||| |||| |||||| || |||||||||| ||||| ||||||| | ||||||||    
T  6436609 tgttcgtcgtcttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaatc 6436705  T
Q  116 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||||||||  |||||| |||  |||||| ||| |||| ||| |||  || |||| |||||||||||||| ||||||    
T  6436706 aatgatttggacgtcaatgttacagatcctgaaacatgagtaatctagtggtttaaattttatcatattacttgtag 6436782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 31128891 - 31128698
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 102  Q
    ||||||| ||||||||| ||||||| ||||| ||||   |||||  |  |||||| |||||| |||||| |||| |||||||| |||    ||| |||||    
T  31128891 tgcggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattccgcttcttgtcgcggtgttcgtttagttcctattgaaaaatcgatatcagtcaat 31128795  T
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
     | | ||||||||||||||||  |||||||||||| ||||||||||||||| |||||    ||| ||| ||||||||||||||||||||| ||||||    
T  31128794 tacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcatttt 31128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 18107825 - 18107636
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||| || ||||||| ||||||||||| |||||| |||| | | ||||||||||| ||||||||| ||  |||| ||||||||   |      
T  18107825 gtttgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattcaattaacaatttatgcgtcaa---tac 18107729  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||| |||||  ||||| ||||| || |||||||||||||||| ||  |||||||||| ||| ||||||||||| ||| |||||    
T  18107728 agatccagaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggca--ttttgtcgttttatattattaacttgcgtgttgtga 18107636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 33760259 - 33760111
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||||| ||| ||||||| ||| ||||||||||||| ||||| ||||| ||||| ||||||||||||||| ||||| | |||| ||||||  || |    
T  33760259 gtcttgttgcagtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataaac 33760160  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||| |||||    ||| |||||  |||||||||||||||||| ||||||    
T  33760159 atgtgtatttcagtgacttagaacttatcatattatttgtaggcatttt 33760111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 33923766 - 33923919
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||||||||||| | |||  | ||| |||| |||||    
T  33923766 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 33923865  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| || |   |||||||||| |||| |||||||||||||| |||||    
T  33923866 tcatattatttgcaggc--gttttgtcgttttatgctattaacttgggtgctgtga 33923919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 12647160 - 12647030
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    |||||| |||| ||||||||||||| ||||| ||||||| |||||||||| || |||||  || ||| ||||||||||||||||||||  |||| || ||    
T  12647160 tcgttttgttcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtg 12647061  T
Q  166 atttagattttatcatattatttgtagacatttt 199  Q
    |||||||||   ||||||| ||||||| ||||||    
T  12647060 atttagatt---tcatattttttgtaggcatttt 12647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 233
Target Start/End: Complemental strand, 33585801 - 33585621
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    ||||||| |||||| | |||  |||| |||||||| |||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||    
T  33585801 gtcttgtcgcggtgtttgttcagttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 33585702  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||| ||| |  | |||||||  |||||||||||||||||||  ||  ||||| ||||||||| |||||||||||||| |||||    
T  33585701 atgagtaattcggtgatttaagttttatcatattatttgtatgca--ttttgccgttgtatgctattaacttgggtgttgtga 33585621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 38445153 - 38445380
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||| ||| ||||||||||||||||| ||| | ||||   |||||| | || || | |||||| | |||  |||| ||||||||||||  | ||| | |    
T  38445153 agtgcagcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctacatcagtaa 38445249  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||| ||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  38445250 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggca--ttt 38445347  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || | ||||||||||||||||| |||| |||||    
T  38445348 tgccattgtatgttattaactttggtgctgtga 38445380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 31210651 - 31210525
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||| | |||||||||||||  | ||||||||     
T  31210651 gttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttagg 31210552  T
Q  173 ttttatcatattatttgtagacatttt 199  Q
    |||||||||||||||||||| ||||||    
T  31210551 ttttatcatattatttgtaggcatttt 31210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 8809304 - 8809493
Alignment:
Q  41 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 140  Q
    ||||||| | ||||||| |||||| |||  | |||| ||||||||||||  | ||| ||||| | |  |||||||||||||||| ||| |||| ||| ||    
T  8809304 ttgatttcgcgtcttgtcgcggtgttcgcatagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcag 8809403  T
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||| | |||    ||| |||||||||||||||||| | |||||||  ||||||||||||||| ||||||||||| || |||||    
T  8809404 atccggaagcatgagaatttcagtgacttagattttatcatatta-tagtagaca--ttttgtcgttgtatgctattaacttggatgttgtga 8809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 29173794 - 29173603
Alignment:
Q  42 tgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtaga 141  Q
    |||||||| ||||| | || ||| |||||| |||| ||||||||| ||  | ||| ||||| | | ||||||||||| ||||| | |||||||||| |||    
T  29173794 tgattttgcgtcttatcgcagtgttcgtttagttcctattgaaagctcgacatca-tcaattacaaattcaatcaattatttgggtgtcaacgttgcaga 29173696  T
Q  142 tccggaagcatgggtattctgatgatttagattttatcatattatt---tgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||||||||||||  | ||| ||||||||||||||||||||   ||||  ||||||  || |||||||||||||||||| |||| |||||    
T  29173695 tccgaaagcatgggtatttcggtgacttagattttatcatattattatttgtatgcatttt--gttgttgtatgttattaactttggtgttgtga 29173603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 1415579 - 1415739
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | || |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| ||||||||||||     
T  1415579 gtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttga 1415678  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||| | |||  | ||| |||| |||||||| ||||||||||| ||||||    
T  1415679 agatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtaggcatttt 1415739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 7646588 - 7646692
Alignment:
Q  127 cgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||    
T  7646588 cgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggt 7646685  T
Q  227 gatgtga 233  Q
    | |||||    
T  7646686 gttgtga 7646692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 12677459 - 12677344
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||| | ||| || ||| |||| ||||||||||||| |||||| |||||||   ||||    
T  12677459 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatatta-ttgtaggcattttt--ccgtt 12677363  T
Q  208 gtatgttattaacttgggt 226  Q
     |||| |||||||||||||    
T  12677362 ttatgctattaacttgggt 12677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 28871866 - 28871763
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| ||||||||||| ||||||||||||| ||||| ||||| | |||||||| |||||||||  ||||| ||||||     
T  28871866 gtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcgacgttgc 28871767  T
Q  139 agat 142  Q
    ||||    
T  28871766 agat 28871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 29279579 - 29279488
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||||||||||||| |||| |||||||||| |||| || ||  | ||| ||| ||||||||||||||||||||| ||||||    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtaggcatttt 29279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 9169259 - 9169144
Alignment:
Q  116 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtta 215  Q
    |||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  | |||||||||||||||||| ||  ||||| ||||||||| ||    
T  9169259 aatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggca--ttttgccgttgtatgcta 9169162  T
Q  216 ttaacttgggtgatgtga 233  Q
    ||||||||| || |||||    
T  9169161 ttaacttggatgctgtga 9169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 14423365 - 14423507
Alignment:
Q  57 ttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggt 156  Q
    |||||||| | ||||||||||||||||||||||  ||| | ||||| | ||||| |||||||||||||  ||||||||||| | |||  ||| |||||||    
T  14423365 ttgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatgggt 14423464  T
Q  157 attctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||  | | | ||||||||||||||||||| | ||| ||||||    
T  14423465 atttaggttagttagattttatcatattatatttaggcatttt 14423507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 36943234 - 36943041
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||| ||||  |||||||||||  | | | ||     
T  36943234 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatctacattagtcg 36943138  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    || | | |||| | |||||||||| |||||||||||| |||||||||| ||||||||||  | ||| ||  ||||||||||||||||||||| ||||    
T  36943137 attacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtaggcatt 36943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 21612360 - 21612444
Alignment:
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||| |||||||| |   |||||||||||||| |||||||||||||    
T  21612360 agatccggaagcataagtattctggtgatttatattttatcatattgtttgtagaaa---tttgtcgttgtatgctattaacttgggt 21612444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 17994739 - 17994648
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||||||||||  ||||||||||| | |||||||| ||| ||||||  | ||| ||| ||||||||||||||||||||| ||||||    
T  17994739 attcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcatttt 17994648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 19062361 - 19062233
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt-----atttgtagacattttttg 202  Q
    |||||||||||||||||  ||||||||||  ||||||| |||||||||||||  | ||| |||  ||||||||||||     |||||||| ||  |||||    
T  19062361 attcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattatttaatttgtaggca--ttttg 19062264  T
Q  203 tcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||||||| ||||||||||||||||||||    
T  19062263 ccgttgtatgctattaacttgggtgatgtga 19062233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 19597873 - 19597980
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||| | ||||   |||||||||||||||||||||||| | || ||||||| |||||||||||||| || ||||| | ||||| | |||    
T  19597873 tgtgttgttcgtcgtattgtgtcgtgttgtttgattttgtgtcttgttgtgatgttcgtttgattcttattgaaagaccaacttcagttaatcacaaatt 19597972  T
Q  111 caatcaat 118  Q
     |||||||    
T  19597973 taatcaat 19597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 31788547 - 31788670
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| ||||||| ||||||| |||||    ||| |||| ||||| |||||||||||||| ||  ||||| ||||    
T  31788547 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggca--ttttgccgtt 31788644  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||||| || |||||    
T  31788645 gtatgctattaacttggatgctgtga 31788670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 43397232 - 43397010
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||||| ||||   |||||| | ||||||| |||||| ||||||  ||| ||||||||||||  | | |  ||    
T  43397232 agtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcggcattagcca 43397136  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacg-ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |  |   |||||| |||||||||| ||||||||| ||| ||||||||||||||| | |||    ||| |||| |||||||||||||||||||  ||  ||    
T  43397135 actacgaattcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgtacgca--tt 43397038  T
Q  200 ttgtcgttgtatgttattaacttgggtg 227  Q
    ||| |||| |||| ||||||||||||||    
T  43397037 ttgccgttttatgctattaacttgggtg 43397010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 11812699 - 11812784
Alignment:
Q  33 gacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaat 118  Q
    |||||||||||||||||||||||||||||||| |  |||| ||| ||| ||||||||| ||||| || || | |||||||||||||    
T  11812699 gacgttgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaatcaat 11812784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 459347 - 459269
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    |||| |||||||||||| ||  ||||||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  459347 tgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 27097415 - 27097293
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| ||||| |||||||| ||||||  | ||| |||  ||||||||||||||||||||  |  ||||| ||||    
T  27097415 attcaaccaatgatttggacgtcaacgttgcagatctggaagcat-ggtatttcggtgacttaagttttatcatattatttgtaggaa--ttttgccgtt 27097319  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||  |||||||||||||| |||||    
T  27097318 gtatactattaacttgggtgttgtga 27097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 36691965 - 36692088
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||| ||| ||||||  ||||||| | |||  | |||||||| |||||||||||||||||||| ||  ||||| ||||    
T  36691965 attcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggca--ttttgccgtt 36692062  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
     |||| ||||||||||| || |||||    
T  36692063 ttatgctattaacttggttgttgtga 36692088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 4041601 - 4041512
Alignment:
Q  110 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| ||||||||||  ||||||||||| ||||||| ||||||| |||||  ||| | ||||  ||||||||||||||||||| ||||||    
T  4041601 tcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattatttgtagccatttt 4041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 36175562 - 36175477
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 136  Q
    |||||||||||||| ||||||||||  ||||||||||||| | |||  |||| | | |||||||||||||||||  ||||||||||    
T  36175562 gtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    |||||||||| |||||| ||| | ||||||||||||||  |||||||||||||| || |||| ||| |||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 9418426 - 9418501
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||| ||||  | || ||||||||| |||||||||||| || || |||||||| |||||||||||    
T  9418426 tgttgttcgtcgtcttgtgtagcattatttgattttttgtcttgttgcgatgttcatttggttcctattgaaagat 9418501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 280948 - 281012
Alignment:
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||||||||| |  ||||||| ||||||||| |||||||||||||| |||||    
T  280948 ttagaatttatcatattatttgtatat-ttttttgccgttgtatgctattaacttgggtgctgtga 281012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 7604267 - 7604381
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||| ||| |||||||| || ||||||  || |||||  | ||||||| |||| ||||| |||||||||||  ||||||  |||| || ||    
T  7604267 attcaatcaatgacttgagcgtcaacattatagatctagatgcatgattgttctgatcattttgatttcatcatattattcatagaca--ttttatcatt 7604364  T
Q  208 gtatgttattaacttgg 224  Q
    ||||| |||||||||||    
T  7604365 gtatgctattaacttgg 7604381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12648036 - 12647967
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtt 70  Q
    ||||||| | ||||||||||||||||| ||| | |||||||||||||   |||||||||||||| |||||    
T  12648036 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttcgtt 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 17319423 - 17319527
Alignment:
Q  119 gatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttatta 218  Q
    |||||| |||||||||||| ||||||| |||||||||||||| | | | ||  ||||||||||| |||||||| |    || ||||||| ||||||||||    
T  17319423 gatttgagcgtcaacgttgcagatccgaaagcatgggtattccggtcactttaattttatcata-tatttgtataggcattatgtcgttatatgttatta 17319521  T
Q  219 acttgg 224  Q
    ||||||    
T  17319522 acttgg 17319527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 2808462 - 2808337
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcg 205  Q
    |||||||||| |||||  |||||||||||| ||||||||||| ||||| ||||| ||| | ||  |||||||||||| | ||||||| ||  || || ||    
T  2808462 attcaatcaaagattttggcgtcaacgttgcagatccggaagccatggatattccgatcactttaattttatcatatatttttgtaggca--ttatgccg 2808365  T
Q  206 ttgtatgttattaacttgggtgatgtga 233  Q
    || |||| ||||||||||| ||||||||    
T  2808364 ttatatgctattaacttggatgatgtga 2808337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 7448234 - 7448421
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| ||| || | |||  || | | ||||||||||  | ||| |||    
T  7448234 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtca 7448330  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    || | | |||||| |||| |||||  ||||||||||| ||||||||||||||| |||||    ||| |||  |||||||||||||||||||    
T  7448331 attacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagttttatcatattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 9986413 - 9986337
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 19597981 - 19598053
Alignment:
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||| |||||||||||||||||||  ||||  ||||||||| |||||||||| ||| |||||    
T  19597981 ttctggtgatttagattt-atcatattatttgtagaca--ttttaccgttgtatgctattaacttgagtgttgtga 19598053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 35220347 - 35220467
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| || ||||  ||||| || ||| |||| ||||||||||||| | ||| || || | | |||||| |||||||||| |||||||| |||     
T  35220347 gtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgc 35220446  T
Q  139 agatccggaagcatgggtatt 159  Q
    |||||   |||||||||||||    
T  35220447 agatcttaaagcatgggtatt 35220467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| |||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 32092422 - 32092247
Alignment:
Q  12 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 111  Q
    |||||||||||  ||| ||| | || ||||| |||| | ||||||  ||| || | ||||| ||| |||||||  |||  ||||| || |||||||||||    
T  32092422 gtgttgttcgttatcttgtgcgccgatgttttatttagcgtcttgccgcgatgtttgtttgtttcatattgaattatctacttcaatccatcatagattc 32092323  T
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
    ||||||||||||   ||||||| ||  ||||||  || ||||  ||||||| | ||||||||||| ||||||||||    
T  32092322 aatcaatgatttcaacgtcaacattacagatccaaaaacatgaatattctgttaatttagattttgtcatattatt 32092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 38293641 - 38293716
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 184  Q
    |||||||||||||| | |||||||||||||||||||||| |||  | |||||| |||| ||  ||||||| |||||    
T  38293641 ttcaatcaatgattcgagcgtcaacgttgtagatccggatgcaccgatattctaatgactttaattttattatatt 38293716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 4100459 - 4100541
Alignment:
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
    |||||||||||||||| ||||  | ||| |||  |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||    
T  4100459 agatccggaagcatgg-tatttcggtgacttaagttttatcatattatttgtaggca--ttttgccgttgtatgatattaacttgg 4100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 11985308 - 11985151
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| ||||||| |||||| || ||| |||| |||||||||| |  |   | ||||| | | | |||| |||||||||  | ||||||||||     
T  11985308 gtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagagcgac---agtcaattacaaactcaaccaatgatttaggtgtcaacgttgc 11985212  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||| |||| ||| |||||    ||| |||| |||||||||||||||||||| ||||||    
T  11985211 agatccagaagaatgagtatttcagtgacttaggttttatcatattatttgtaggcatttt 11985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 28227786 - 28227709
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    |||| |||||||||||| ||| ||||||||| |||||   |||||||||| ||  ||||| | |||||||||||||||    
T  28227786 tgtgctgttcgtcgtcttgtgcgacgttgttagatttctcgtcttgttgctgtattcgttggattcttattgaaagat 28227709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 37628697 - 37628793
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 108  Q
    |||||| |||||||||| ||| | |||||||||||| | | |||||||| |||| | ||||||||||| |||||| ||||  |||| ||||| |||||    
T  37628697 tgtgttattcgtcgtctcgtggg-cgttgtttgattctctttcttgttgtggtgtttgtttggttcttgttgaaatatcaatttcagtcaattataga 37628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 41327523 - 41327644
Alignment:
Q  37 ttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 136  Q
    |||||||||||   || ||||||||||| ||||||||||  ||||||||||||   |||| ||||| | | |||||| ||||||||||  ||||||| ||    
T  41327523 ttgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacatt 41327622  T
Q  137 gtagatccggaagcatgggtat 158  Q
      ||||||  || |||||||||    
T  41327623 acagatccataaacatgggtat 41327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 3269182 - 3269106
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3269182 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 3269741 - 3269665
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3269741 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 3270300 - 3270224
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3270300 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 3725271 - 3725307
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatcc 144  Q
    |||||||||| |||||| |||||||||||||||||||    
T  3725271 attcaatcaaagatttgagcgtcaacgttgtagatcc 3725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 6173642 - 6173718
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    |||||||||| |||| ||||| ||||||||||||||   ||||  ||||||| || |||| ||| ||||||||||||    
T  6173642 tgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatc 6173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 6173723 - 6173799
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | ||| ||  ||||||||||||    
T  6173723 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatat 6173799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 85  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8805876 - 8805952
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| |||||||||||||||   |||||  || |||| || |||| ||| ||||||||||||    
T  8805876 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 14416157 - 14416201
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattt 47  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||||    
T  14416157 tgcggcgttgtattgttcgtcgtcttgtgtggcgttgtttgattt 14416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 20047153 - 20047077
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||  |||||| || ||||| || |||  ||| ||||||||||||    
T  20047153 tgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatc 20047077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 26025481 - 26025405
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||| ||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| | ||||||||||    
T  26025481 tgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 38293559 - 38293591
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgat 45  Q
    ||||||||||||||| |||||||||||||||||    
T  38293559 tgttgttcgtcgtcttgtgtgacgttgtttgat 38293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 39310861 - 39310778
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||||||||| ||||||| || ||||| ||| | ||||| | |||||||||||    ||| |||||||||||||||||||||||||    
T  39310861 attcaatcattgatttgggcatcaacattgcacatccg-aggcatgggtatttcagtgacttagattttatcatattatttgtag 39310778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 28541025 - 28540791
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  ||  |||||| |  ||| ||||||||||| ||||||||||| | |||||    
T  28541025 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttca 28540926  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  28540925 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgatttagatttcatcatattatttgtagacat 28540826  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||   ||||||||| |||||||||||||| |||||    
T  28540825 tttt--ccgttgtatgctattaacttgggtgctgtga 28540791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 14211206 - 14211430
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| | ||||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||  |||||| |    
T  14211206 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 14211305  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     || ||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||    ||    
T  14211306 aatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttt--ctgt 14211403  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||||||| |||||    
T  14211404 tgtatgctattaacttgggtgttgtga 14211430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 35921097 - 35920895
Alignment:
Q  15 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 114  Q
    |||||||||||||  || ||||||||||||||| | |||||||||||||| || |||| ||| |||| ||||||||  |||| ||||||| |||||||||    
T  35921097 ttgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaat 35920998  T
Q  115 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtt 214  Q
    ||||||||||  ||||||||||| |||||||||||||| | ||||||  |||||| |||||||||||||||||||||| ||  ||||||| ||||||| |    
T  35920997 caatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgattttgattttatcatattatttgtaggca--ttttgtcattgtatgct 35920900  T
Q  215 attaa 219  Q
    |||||    
T  35920899 attaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 8088316 - 8088103
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||  |||||| ||| | ||||||||||||| |  ||||||||| ||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||    
T  8088316 tgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagatt 8088218  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| ||||||  || || | |||||||| ||||||||||| ||||||||||||||||| ||  ||||| | |||||    
T  8088217 caatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgcctttgta 8088120  T
Q  211 tgttattaacttgggtg 227  Q
    || ||||||||||||||    
T  8088119 tgctattaacttgggtg 8088103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 2979364 - 2979191
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| |||| |||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| |||||| |||||    
T  2979364 tgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggta 2979265  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||| |||||||||||||||| ||  || || ||||||||| ||||||||||| || |||||    
T  2979264 ttctggtgatttagatttcatcatattatttgtaggca--ttgtgccgttgtatgctattaacttggatgttgtga 2979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 10722772 - 10722964
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||||||||| |  ||||| |||||| |||| ||||||||||||  ||||| ||| | | | ||||||||||||||||| |||||||||||||    
T  10722772 gtttgattttgtgtcttatctcggtgttcgtttagttcctattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgt 10722871  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||  |||||||||||||  | ||| ||||||||||||||||||||||||| |||||||   || ||||||||||||||||| ||| |||||    
T  10722872 agatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtaggcattttt--ccgctgtatgttattaacttgagtgttgtga 10722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 39567321 - 39567473
Alignment:
Q  79 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 178  Q
    |||||||||||| |||||  |||||| | |||||||||||||||||  ||||||| ||| |||||| ||| ||||||||||||| |||||||||||| ||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  179 catattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  39567421 catattatttgtagaca--ttttgtcgttgtatgttattaccttgggtgttgtga 39567473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 13007205 - 13007432
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   ||||||||||| |||| |||||| | |||| |||| | ||||||||||  | ||| |||    
T  13007205 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtca 13007301  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  13007302 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttt 13007399  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  13007400 tgccgttgtatgctattaacttgggtgctgtga 13007432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 24229896 - 24229669
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||||||||||   |||||| | ||||||| |||||| | |||| |||| ||||||||||||  | ||| |||    
T  24229896 agtgcggcgttttgttgttcgtcgtcttgtgtgacgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatca 24229800  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| ||||||||||  |||||| |||| |||||||| ||||||| || ||||| ||| |||| |||||||||||||||||||| ||  ||    
T  24229799 attacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctg-tgacttaggttttatcatattatttgtaggca--tt 24229703  T
Q  200 ttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||| ||||||||| |||||||||||||| |||||    
T  24229702 ttgccgttgtatgctattaacttgggtgctgtga 24229669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14726573 - 14726346
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| ||   |||||||||| | |||||||  ||||| | ||||  ||||||||||||||||  | ||| |||    
T  14726573 agtgcggtgttgtgttgttcgtcgtcttgtgcga---tgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtca 14726477  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||| |||||||||| | |||||||||| ||||||||||||||| | ||| || ||| |||| |||||||||||||||||||| ||  |||    
T  14726476 atcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggca--ttt 14726379  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| |||  ||||||||||| || |||||    
T  14726378 tgtcgttttataatattaacttggatgctgtga 14726346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 38597773 - 38598000
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| | |||| | |||  |||| ||||||||||||  | ||| |||    
T  38597773 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtca 38597869  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||    ||| |||| |||||||||||||||||||| ||  |||    
T  38597870 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggca--ttt 38597967  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  38597968 tgccgttgtatgctattaacttgggtgttgtga 38598000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 41630525 - 41630705
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||  ||||| |||||| |||| |||| |||||||  ||||| ||||| | | ||||||||||||||||| |||||||||||| | |||| |||||    
T  41630525 gtcttgtcacggtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagc 41630624  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||| |||||    ||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||| |||||    
T  41630625 atgtgtatttccgtgacttagattttatcatattatttgtagaca--ttttgtcgttgtatgctattaacttaggtgttgtga 41630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 10332653 - 10332432
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| ||||||| ||| | | ||||||||||| | |||||||||| ||| | ||||| ||| ||||||||||| |   ||| ||||||| | |||    
T  10332653 tgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacatatt 10332554  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga-tttagattttatcatattatttgtagacattttttgtcgttgt 209  Q
    | ||| |||||||   |  |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||| ||  ||||||| || |    
T  10332553 cgatcgatgatttagacaccaacgttgcagatccggaagcatgagtattctgatgattttagatttcatcatattttttgtaggca--ttttgtctttat 10332456  T
Q  210 atgttattaacttgggtgatgtga 233  Q
    ||| ||||||||||||||||||||    
T  10332455 atgctattaacttgggtgatgtga 10332432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 26878185 - 26877994
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| ||||||||| |||||| ||||||  ||  | ||||||||||  | ||| ||||| | | ||||||||||||||||| |||||||| |||     
T  26878185 gtttgatttcgtgtcttgtcgcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgc 26878086  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||||||| || ||| ||||||||||||||||||||||||| ||   |||||||||||||  ||||||||||| || |||||    
T  26878085 agatccagaagcatgggtattttggtgacttagattttatcatattatttgtaggca--ctttgtcgttgtat-ctattaacttggatgttgtga 26877994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 19103525 - 19103358
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||| ||| ||| ||||||| | |||||  |||||| | ||||||||||||||||| |||||||  ||| |||||| |||||||| |||    
T  19103525 tgcggtgttcgtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagta 19103426  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||| | |||||||||||| |||||||||||| ||| |||||||   ||||||||| ||||||||| ||||    
T  19103425 ttccggtgatttagatttcatcatattatttataggcattttt--ccgttgtatgctattaactttggtg 19103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 34945405 - 34945596
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | || |||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  34945405 tttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 34945504  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||  | ||| |||  |||||||||||||||| ||| ||  ||||||||||||||| |||||||||||||| |||||    
T  34945505 gatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggca--ttttgtcgttgtatgctattaacttgggtgttgtga 34945596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 25980144 - 25980360
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   | |||| | ||||||| |||||| | |||| |||| ||||||||||||| | ||| ||||  | | |||    
T  25980144 tgtgttgttcgtcgtcttgtgcggcgtt---taatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaaatt 25980240  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||| |||||||||| ||||||| |||| |||| |||||||||||||||| |  ||| |||  |||||||||||||||||||| ||  ||||| |||| ||    
T  25980241 caaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatt-tcgtgacttaagttttatcatattatttgtaggca--ttttgccgttata 25980337  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || ||||||||||||||||||||    
T  25980338 tgctattaacttgggtgatgtga 25980360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 6216948 - 6217102
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | ||||||||||||||||| |||||||||||| |||| |||||||||| |||||  | ||| ||| ||||||    
T  6216948 tattgaaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaatttta 6217047  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| || |||  ||| ||||||| |||||||||| ||| |||||    
T  6217048 tcatattatttgtaggca-tttaagtcattgtatgctattaacttgagtgctgtga 6217102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 37986225 - 37985998
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||| |||||| ||| | ||||   |||||| |  ||||||||||| | ||||||| ||||||||||||||||| |||   |||    
T  37986225 agtgcggcgttgtgttgttcatcgtcttgtgcggcgtt---tgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgtca 37986129  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
     | | ||||||||||||||||||| | ||| | |||  || ||| |||  || |||||| |  ||| ||||| ||||||| ||||||||||||||  |||    
T  37986128 tttacagattcaatcaatgatttgagtgtcgaagttacaggtccagaattataggtattttagtgacttagaatttatcacattatttgtagaca--ttt 37986031  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||||||  ||||||||    
T  37986030 tgtcgttgtatgctattaacttgaatgatgtga 37985998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 16758552 - 16758742
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | || ||||| ||||| ||||||||||| |||||||| |||    ||| |||||||||||||||||||||||||||  | |||||| | ||    
T  16758552 tttgatttcgcgttttgttacggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcatagattcaatcaatgatttgaacatcaacgctata 16758651  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| | || |||| ||||||  || ||||| |||||||||||||||||||| |||  ||||| ||||| |||||||| |||||| || |||||    
T  16758652 gatctgaaaacatgagtattcaaattatttaaattttatcatattatttgta-aca--ttttgccgttgcatgttattgacttggatgttgtga 16758742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 14082393 - 14082292
Alignment:
Q  119 gatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttatta 218  Q
    |||||| || ||||||||| |||||||||||||||||||||   |||| |||| |||||||||||||||||||| ||  ||||||||||||||| |||||    
T  14082393 gatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggca--ttttgtcgttgtatgctatta 14082296  T
Q  219 actt 222  Q
    ||||    
T  14082295 actt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 15571566 - 15571690
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||| ||| ||| | ||| ||| ||||||||||||||||| |||||||||||    ||    
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcag-tgacttaaattttatcatattatttatagacatttttcca-gt 15571663  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||||||| |||||    
T  15571664 tgtatgctattaacttgggtgttgtga 15571690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19120886 - 19121083
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||||||||  || | | ||||||||||| | |||||||||||||| | ||||| ||| | ||| ||||||| ||||| |||    
T  19120886 agtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtca 19120984  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||| |||||||| ||  ||||||||| || |||||  ||| ||||  ||||  | ||| |||| |||||||||||||||||||||| ||||    
T  19120985 attacaaattctatcaatgacttaagcgtcaacgctgcagatctagaaacatgaatatttcggtgacttaggttttatcatattatttgtagacgtttt 19121083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 7930153 - 7930358
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| |||   ||| ||||||||| |  ||| || || ||| | |||| |||| ||| ||||||||  | ||| |||    
T  7930153 agtgcggcgttgtgttgttcgtcgtcttgtg---cgtcgtttgatttcgcatctggtcgcagtgtttgtttagttcctatggaaagatcgacgtcagtca 7930249  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| ||||||| |||| ||||||||||||||| |||||  | |   |||| |||||||||||||||||||| ||  |||    
T  7930250 attacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcatattatttgtaggca--ttt 7930347  T
Q  201 tgtcgttgtat 211  Q
    |||||||||||    
T  7930348 tgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 9113837 - 9113616
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   ||||||   || |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  9113837 agtgcggcgttctgttgttcgtcgtcttgtgcggcgtt---tgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 9113741  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||| | ||||  | ||| |||  |||||||||||||||||||| |||||||    
T  9113740 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcattttt 9113641  T
Q  201 tgtcgttgtatgttattaacttgggtg 227  Q
       ||||||||| ||||||||||||||    
T  9113640 --ccgttgtatgctattaacttgggtg 9113616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 38007369 - 38007529
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |||| |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | ||| || ||||||||||  |||||||||||     
T  38007369 gtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttga 38007468  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||| | |||  | ||| |||| |||||||||||||||||||| ||||||    
T  38007469 agatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtaggcatttt 38007529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 6012250 - 6012023
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| |||| |||||||  | ||| |||    
T  6012250 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtca 6012154  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  |||||| ||||||||||||||||||||||||||    ||| |||  ||| |||||||||||||||| ||  ||     
T  6012153 attacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaagtttgatcatattatttgtaggca--ttc 6012056  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |  |||| |||| ||||||||||||||||||||    
T  6012055 taccgttttatgctattaacttgggtgatgtga 6012023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 20257685 - 20257561
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcgt 206  Q
    |||||||||| |||||| ||||||||||||||||||||||| | ||||||||| | | | ||  |||||||||||| | ||||||| ||  || ||||||    
T  20257685 attcaatcaaagatttgcgcgtcaacgttgtagatccggaaacgtgggtattccggtcactttaattttatcatatatttttgtaggca--ttatgtcgt 20257588  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    | |||||||||||||||| ||||||||    
T  20257587 tatatgttattaacttggatgatgtga 20257561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 35850785 - 35850996
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   |||||| | || || | |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | |||    
T  35850785 tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttatcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 35850881  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||| ||||||||||||||||||||||| |||||| |||||||| | |||  | ||| |||| ||||||||||||||||| || ||   |||| |||| ||    
T  35850882 caaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggca--ctttgccgtttta 35850979  T
Q  211 tgttattaacttgggtg 227  Q
    || ||||||||||||||    
T  35850980 tgctattaacttgggtg 35850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 233
Target Start/End: Complemental strand, 31391801 - 31391638
Alignment:
Q  68 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgat 167  Q
    |||| ||| |||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||| |||||| |||| ||| |||||  | |||     
T  31391801 gtttagtttttattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgac 31391702  T
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| |||||||||||||| ||||| |||||||    |||||||| ||||||||||| || |||||    
T  31391701 ttaggttttatcatattatatgtaggcattttt--ctgttgtatgctattaacttggatgttgtga 31391638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 38111053 - 38110939
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| || |||| ||| | |||||||||||||||||||||||||| ||| | ||||||||| |||||||| ||||  || | ||||||||| | |    
T  38111053 tgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatcaatttaagtcaatcataaact 38110954  T
Q  111 caatcaatgatttgt 125  Q
    || ||||||||||||    
T  38110953 cagtcaatgatttgt 38110939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 13421978 - 13422136
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||| ||||| | | ||||||||||||||||| ||||||| |||| |||| | |||||||| |||||  | ||| ||| |    
T  13421978 gttcctattgaaagatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttata 13422077  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||| ||||| |||||||   |||| |||| ||||||||||| || |||||    
T  13422078 ttttatcatattatatgtaggcattttt--ccgttttatgctattaacttggatgttgtga 13422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 7036303 - 7036383
Alignment:
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||||  || || ||||||||||||||||| |||||||    
T  7036303 aatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcatattgtttgtag 7036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 11192459 - 11192571
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||| ||||||||| | ||||||||||||||||||||| |||| |||||  ||| | ||  | |||||| |||||||||||  ||  ||||||||||    
T  11192459 attcaataaatgatttgggtgtcaacgttgtagatccggaaacatgagtatttcgatcactttaaatttatcgtattatttgtaagca--ttttgtcgtt 11192556  T
Q  208 gtatgttattaactt 222  Q
    |||||||||||||||    
T  11192557 gtatgttattaactt 11192571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 8096573 - 8096383
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | ||||||| |||||| |||||| |||| |||||||||||   | ||| ||||| | |  ||||| |||||||||| |||||||| ||| |    
T  8096573 tttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcaatcaattacaatttcaaccaatgatttgagcgtcaacattgca 8096474  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||||  |||| |  ||| | |||||||| |||||||||||||||||||| ||  ||||| | || |||| |||||||||||||| |||||    
T  8096473 gaaccggagccatgtgatttcag-tgatttaggttttatcatattatttgtaggca--ttttgccattttatgctattaacttgggtggtgtga 8096383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 11977012 - 11976820
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| | ||||  ||  |||||| |||||  | ||| ||||| | | |||||| ||||||||||  ||| |||||||     
T  11977012 gtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggcatcagtcaattacaaattcaaccaatgatttggacgtgaacgttga 11976913  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||| | |||  | ||| |||| |||||||||||||||||||| ||  ||||  |||| |||||||||||||||| || |||||    
T  11976912 agatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggca--ttttcccgttttatgttattaacttggatgttgtga 11976820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 26825406 - 26825633
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||| ||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  26825406 agtgcggcgttgtgttgttcgtcttcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 26825502  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||| ||   |||||| ||||||  |||||||  ||||  | ||| |||  |||||||||||||||||||| ||||||     
T  26825503 attacaaattcaaccaatgatttgtacgattacgttgcagatccataagcatgtttatttcggtgacttaagttttatcatattatttgtaggcatttt- 26825601  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
     | ||||||||| |||||||||||||| |||||    
T  26825602 -gccgttgtatgctattaacttgggtgctgtga 26825633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 1409536 - 1409669
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    |||||| |||| |||| |||||||  | ||| ||||| | | |||||||||||||||| |||||||| |||| ||||||| || ||||  |||| |  ||    
T  1409536 tcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatgaatattttagtg 1409635  T
Q  166 atttagattttatcatattatttgtagacatttt 199  Q
    | |||||||| ||||||||||||| ||| |||||    
T  1409636 acttagatttaatcatattatttgaagatatttt 1409669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 8985049 - 8984919
Alignment:
Q  18 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 117  Q
    |||||||||| ||||||| ||||||||||  | ||||||||||| || ||||||| ||| ||||    ||||| ||| | ||||||| | || ||||| |    
T  8985049 ttcgtcgtcttgtgtgacattgtttgattccgcgtcttgttgcgctgttcgtttgtttcatatt----gatcagctttagtcaatcacatatacaatcga 8984954  T
Q  118 tgatttgtgcgtcaacgttgtagatccggaagcat 152  Q
    |||||||  || |||||||| ||||||||||||||    
T  8984953 tgatttggacgacaacgttgcagatccggaagcat 8984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 7613131 - 7613053
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| |||  | ||||||||||||   |||||||||||||| || |||| ||| ||||||||||||    
T  7613131 tgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 24874698 - 24874732
Alignment:
Q  199 tttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||||||||||||||||    
T  24874698 tttgtcgttgtatgttattaacttgggtgatgtga 24874732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 11073977 - 11073857
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| | |||  |||| |||||||| |||  | ||| ||||| | | |||||| ||||||||||  ||||||||||      
T  11073977 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttac 11073878  T
Q  139 agatccggaagcatgggtatt 159  Q
    ||||||| |||||||||||||    
T  11073877 agatccgaaagcatgggtatt 11073857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 18677536 - 18677460
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| ||||||||||||||||  |||||  | ||||| || |||| ||| ||||||||||||    
T  18677536 tgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 18677460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 8514596 - 8514548
Alignment:
Q  172 attttatcatattatttgtagacattttttgtcgttgtatgttattaactt 222  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||||||    
T  8514596 attttatcatattatttgtaaatatttt--gtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 36344562 - 36344487
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||| ||| | ||||||||||||||  || || |||||||| || |||| ||| |||||||||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 42579896 - 42579938
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtctt 55  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||    
T  42579896 tgttgttcgtcgtcttgtgcgacgttgtttgattttctgtctt 42579938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 13468612 - 13468677
Alignment:
Q  15 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttat 80  Q
    |||||| |||||| ||||||||||| |||||||   |||||||| ||||| || ||||||||||||    
T  13468612 ttgttcatcgtcttgtgtgacgttgcttgatttctagtcttgtttcggtgttcatttggttcttat 13468677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 19349680 - 19349757
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||||| ||| | |||| ||||||||   |||| |||||  || ||||||||||| |||||||||||    
T  19349680 tgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaaagat 19349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 34881726 - 34881803
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 34881803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 781477 - 781602
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcg 205  Q
    ||||||||||  ||||| |||||||||||| ||||||||||| ||||| ||||| | | | ||  |||||||||||| | ||||||||||  || || ||    
T  781477 attcaatcaaaaatttgagcgtcaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatttttgtagaca--ttatgccg 781574  T
Q  206 ttgtatgttattaacttgggtgatgtga 233  Q
    || |||| ||||||||||| || |||||    
T  781575 ttatatgctattaacttggatgttgtga 781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 13468688 - 13468779
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga-tttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||| | | |||||||||| |||| ||||| |||  ||||| |||| | ||||| |||||||||||||| ||||| ||||||    
T  13468688 attcaatcaatgattcgagtgtcaacgttgcagattcggaaacatcagtattttgatcactttag-ttttatcatattatgtgtaggcatttt 13468779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 16981298 - 16981374
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | | |||||| |||||  ||||| |||||||| || |||| ||| ||||||||||||    
T  16981298 tgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatc 16981374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 26578260 - 26578336
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| |||||||||||||||   |||||  ||| ||| || |||| ||| ||||||||||||    
T  26578260 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  || |||| ||||||| ||| ||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24069509 - 24069290
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||| |||| ||| | |||| |||||||| | || ||||||||||| ||||||| ||| |||||||| |||| ||||  |||    
T  24069509 agtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatca 24069410  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| || ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||||| ||||||||||||||||||||||||||||| ||  |||    
T  24069409 atcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagattttatcatattatttgtaggca--ttt 24069312  T
Q  201 tgtcgttgtatgttattaactt 222  Q
    | |||||||||| |||||||||    
T  24069311 tatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 38880693 - 38880477
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||||| || ||||||||| | ||||| ||  |||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||| |||    
T  38880693 agtgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtca 38880594  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcata-ttatttgtagacatttt 199  Q
    |||| | ||||||||||||||||| | | |||||||| ||||| ||||||||| ||||| |  | ||||||||||||||||| |||| ||||||||  ||    
T  38880593 atcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttatttagattttatcatacttatctgtagaca--tt 38880496  T
Q  200 ttgtcgttgtatgttatta 218  Q
    ||||||||||| |||||||    
T  38880495 ttgtcgttgtaagttatta 38880477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 41553539 - 41553328
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||||||||  |||| ||||||| | |||    
T  41553539 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatatt 41553440  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    || | |||||||||  ||||||||||| |||||||||| ||| | |||| || |||||||||||||||||||| |||  || || | ||||| |||||||    
T  41553439 cagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagattttatcatatcatt--tatacgtattttgccgttgta 41553342  T
Q  211 tgttattaacttgg 224  Q
    || |||||||||||    
T  41553341 tgctattaacttgg 41553328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28476199 - 28476400
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||||||| ||||||||||||| |||||    
T  28476199 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 28476298  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||| ||||||||||| |||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||||||||| |||    
T  28476299 gacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtattc-ggtgatttagattttatcatattatttgtaggcat 28476397  T
Q  197 ttt 199  Q
    |||    
T  28476398 ttt 28476400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 35132983 - 35133153
Alignment:
Q  61 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 160  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| ||||||  ||||||| ||||||    
T  35132983 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattc 35133082  T
Q  161 tgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |  |||||||||||| |||||||||||| ||| ||  ||||| ||||||||| ||||||||||||||||||||    
T  35133083 tagtgatttagatttcatcatattatttctaggca--ttttgccgttgtatgctattaacttgggtgatgtga 35133153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 22742985 - 22743144
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| |||||||| |||||||| ||    
T  22742985 tcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtg 22743084  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    |||||||||| |||||||||||||| | ||  ||||| ||||||||| |||||| |||||||    
T  22743085 atttagatttcatcatattatttgttggca--ttttgccgttgtatgctattaatttgggtg 22743144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 37837570 - 37837343
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||||| ||||||| |||||| |||||| |||| ||||||||||||  | ||| |||    
T  37837570 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtca 37837474  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| ||||||||||||||| | |||  | ||| |||| ||||||||||||| |||||| ||  |||    
T  37837473 attacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtaggca--ttt 37837376  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| |||||||||||||| |||||    
T  37837375 tgccgttttatgctattaacttgggtgctgtga 37837343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 35665241 - 35665027
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtctt-gttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagat 109  Q
    |||||| |||||||| | ||| ||||||||||||||| | ||||| ||||||||  ||||||| ||| ||| ||||||||| ||||| || |||| ||||    
T  35665241 tgtgttattcgtcgttttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagat 35665142  T
Q  110 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgt 209  Q
    |||||||||||||||  |||||| |||| ||| ||  ||||||| ||||| |  ||||||||||||||||||||||||| | | ||  ||||||||||||    
T  35665141 tcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagattttatcatattattttttggca--ttttgtcgttgt 35665044  T
Q  210 atgttattaacttgggt 226  Q
    ||| |||||||||||||    
T  35665043 atgctattaacttgggt 35665027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 42978589 - 42978816
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   ||||||   || || | |||||| |||||| |||||||||||||||||  | ||| |||    
T  42978589 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacatcagtca 42978685  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| ||||||||||| |||||||||  | ||| |||| |||||||||||||| ||||| ||  |||    
T  42978686 ataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggca--ttt 42978783  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  42978784 tgccgttgtatgctattaacttgggtgttgtga 42978816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 9977283 - 9977095
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| ||||||||| ||| |||| ||||||||||||  ||||| ||||| | | |||||| |||||||||| |||||||||||      
T  9977283 gtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt-- 9977186  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
      ||||||||  ||| ||||| |||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||| || |||||    
T  9977185 --atccggaattatgtgtattttgatgagttagattttatcatattatttttagaca--ttttgtcgttgtatgctattaacttggatgttgtga 9977095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 24350956 - 24350767
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||||    | | |||||| |  ||| ||||||||||| ||||||||||||| |||||    
T  24350956 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtattgaaagatcagcttca 24350857  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    |  ||||| | ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||| |||| ||||||||||||    
T  24350856 c--aatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttaaatttcatcatattattt 24350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24770225 - 24770442
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | |||||||||||||||||  || ||||||   |||||| ||||||||| |||||| ||||||  ||||||||||||||||  | ||| |||    
T  24770225 agtgcggtgttgtgttgttcgtcgtcttatgcgacgtt---tgatttcgtgtcttgtcgcggtgttcgtttatttcttattgaaagatcggcatcagtca 24770321  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||| |||||||||| |||||||||||| |||||| |||||||| | |||  |  || |||| ||||||||||||||| |||||||  |||    
T  24770322 atcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggttttatcatattattggtagaca--ttt 24770419  T
Q  201 tgtcgttgtatgttattaacttg 223  Q
    || |||| |||||||||||||||    
T  24770420 tgccgttttatgttattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 48316889 - 48316697
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  |||||||| ||     
T  48316889 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgc 48316790  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||  |  ||||||| |||||||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  48316789 agatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggtgctgtga 48316697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 13797006 - 13796814
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |||||||||  ||||| |||||| |||| ||||||||||||  | ||| ||||| | | | |||| ||||||||||  |||||||||||     
T  13797006 gtttgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaagatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgc 13796907  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| |||||  | ||| |||  |||||||||||||||||||| ||  ||||||||||||||| ||||||||||| || |||||    
T  13796906 agatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggca--ttttgtcgttgtatgctattaacttggatgttgtga 13796814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 3224515 - 3224342
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||||| |||| ||| ||| || ||||||||   || |||||||| || ||||||||||| ||||||| ||||| ||||| |||||||  ||||    
T  3224515 tgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggatt 3224416  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatta 185  Q
    |||| ||||||||   |||||| |||||||||||||||| ||| ||||| || ||||||||||||||||||||||    
T  3224415 caattaatgattttgacgtcaa-gttgtagatccggaagaatgagtattatggtgatttagattttatcatatta 3224342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 227
Target Start/End: Original strand, 48061436 - 48061622
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| ||||||| |||||| | |||| |||| ||||||||||||  | | | ||||| | | |||||| ||||| |||| ||||||||||||     
T  48061436 gtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgc 48061535  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||  ||||||| |||||  | |||||||| |||||||||||||||||||| ||  ||||| ||||||||| ||||||||||||||    
T  48061536 agatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtg 48061622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 9450249 - 9450022
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  9450249 agtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatca 9450153  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| ||||||||||||||||||||| |  |||||||| |||||||||||||||||||| ||  |||    
T  9450152 attacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggca--ttt 9450055  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||| || |||| |||||    
T  9450054 tgccgttgtatgctattaatttaggtgttgtga 9450022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 12141384 - 12141200
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | |||||||  ||||| | |||| |||| ||||| ||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  12141384 tttgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 12141285  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||||||||||||||  | ||| ||||||||||||||||||||||||  ||  ||||| ||||||||| |||||||||||||    
T  12141284 gatccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgca--ttttgccgttgtatgctattaacttgggt 12141200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 41553884 - 41553749
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||||||||  |||| ||||||| | |||    
T  41553884 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatatt 41553785  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccgg 146  Q
    || | |||||||||  ||||||||||| ||||||||    
T  41553784 cagttaatgatttggacgtcaacgttgcagatccgg 41553749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 45349911 - 45349684
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||| | ||||| ||||   |||||| | ||||||| |||||| |||||| |||| |||||||||||   | ||| |||    
T  45349911 agtgtggcgttgtgttgttcgtcgttttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcagtca 45349815  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||  |||||||| ||| ||||| ||||||||| | |||  | |||||||| |||||||||||||||||||| ||  |||    
T  45349814 attacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggca--ttt 45349717  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| |||||||||||||| |||||    
T  45349716 tgccgttttatgctattaacttgggtgttgtga 45349684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 28044821 - 28044650
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    ||||||| |||||| | |||  |||||||||||||||||    ||| ||||| ||| |||||| || |||||||  ||||||||||| |||||||||| |    
T  28044821 gtcttgtcgcggtgtttgttcagttcttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaac 28044722  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
    |||||||||  | |||||||| |||||||||||||||| ||||||  ||||| ||||||||| |||||||||||    
T  28044721 atgggtatttcggtgatttaggttttatcatattatttttagaca--ttttgccgttgtatgctattaacttgg 28044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 39171627 - 39171481
Alignment:
Q  79 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 178  Q
    |||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||| ||||||    
T  39171627 attgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttat 39171528  T
Q  179 catattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    |||||||||||||| ||  ||||| ||||||||| ||||||||||||||    
T  39171527 catattatttgtaggca--ttttgccgttgtatgctattaacttgggtg 39171481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3394450 - 3394604
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattt--tgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcact 98  Q
    ||||||| | ||||||||||||||||| |||||  ||||||||||||  |||||||| |||||||| | |||| | || ||||||| ||||| ||||| |    
T  3394450 agtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagt 3394549  T
Q  99 caatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 153  Q
    |||||| | |||||||||||||||| | |||| | |||||||||||| |||||||    
T  3394550 caatcacatattcaatcaatgatttctacgtcgatgttgtagatccgaaagcatg 3394604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 5000076 - 4999920
Alignment:
Q  69 tttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatt 168  Q
    |||||||| |||| ||| ||||  |||| ||||| | | ||||||||||| |||||  | |||||||||  |||| |||||||||  ||||||| |||||    
T  5000076 tttggttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatt 4999977  T
Q  169 tagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    || ||||||||||||||||| |||||||||||  ||||||||||||||| |||||||||    
T  4999976 taaattttatcatattatttatagacattttt--tcgttgtatgttattgacttgggtg 4999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 47590290 - 47590517
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||||| ||||||  |||||| | || |  ||| ||||||||||||  | ||  |||    
T  47590290 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatctacatccgtca 47590386  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| | ||||||||||||| |||||  |  || |||| |||||||||||||||||||| ||  |||    
T  47590387 attacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggca--ttt 47590484  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||| | |||||||||||||| |||||    
T  47590485 tgccgttgtaagctattaacttgggtgttgtga 47590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 5348670 - 5348486
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    ||||||||||   ||||| |||||||| ||||||||||| |||||||||||||  |||| ||||| | ||||||||||||||||||| ||||| ||||||    
T  5348670 tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttg 5348571  T
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgg 224  Q
     |||| || ||  ||| |||||    ||| ||||| |||| |||||||||||||| ||  ||||  ||||||||| |||||||||||    
T  5348570 cagattcgaaaatatgtgtatttcagtgacttagaatttaccatattatttgtaggca--ttttaccgttgtatgctattaacttgg 5348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 8001658 - 8001431
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| | |||| | |||  |||| ||||||||||||  | ||| |||    
T  8001658 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcaatca 8001562  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||| ||||| |||| |||||  | ||| |||| |||||||||||||||| ||| ||  |||    
T  8001561 attacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggca--ttt 8001464  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  8001463 tgccgttgtatgctattaacttgggtgctgtga 8001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 41554229 - 41554094
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||| ||||  |||| ||||||| | |||    
T  41554229 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcacatatt 41554130  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccgg 146  Q
    || | |||||||||  ||||||||||| | ||||||    
T  41554129 cagttaatgatttggacgtcaacgttgcatatccgg 41554094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 38798770 - 38798955
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   |||||||| || |||| || ||| | ||||  ||| ||||||||||||  | ||| ||||| | | |||    
T  38798770 tgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatt 38798866  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||| |||||||||| |||||||| ||| ||||||||||||||| | |||  | ||| ||||||||||||||||||||||||| ||||||    
T  38798867 caaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtaggcatttt 38798955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 48930795 - 48930906
Alignment:
Q  113 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatg 212  Q
    |||||||||||| | |||||||||| |||||| ||| ||| ||||||||| |||||||||||| |||||||||||||| | ||  ||||| |||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggca--ttttgccgttgtatg 48930892  T
Q  213 ttattaacttgggt 226  Q
     |||||||||||||    
T  48930893 ctattaacttgggt 48930906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 25255241 - 25255422
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    |||||||||  ||||| ||||||||| || ||| |||| ||| ||||  ||| ||||| ||||| ||||||||||||||| ||||| || || | ||||     
T  25255241 gtttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaattatagattcaatcaattatttgggcatcgatgttgc 25255340  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaactt 222  Q
    |||||| |||||||||| ||| |  ||| ||||| ||||| |||| |||||||| ||  ||||||||||||||| |||||||||    
T  25255341 agatcctgaagcatgggcattttagtgacttagagtttataatatcatttgtaggca--ttttgtcgttgtatgctattaactt 25255422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 19404834 - 19404642
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    |||||||||||  |||||| |||||| || ||| |||| | |||||||||   | ||  ||||| | | ||||||||||||||||| ||||||| ||||     
T  19404834 gtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgacatctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgc 19404735  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||| |||||    ||| ||||||||||||||||||||||||| |  |||||| ||||| | | ||||||||||| || |||||    
T  19404734 agatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggc--tttttgccgttgcacgctattaacttggatgctgtga 19404642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 46700061 - 46700241
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    ||||||| | |||| |||||| |||| |||||||| |||  | ||| ||||  | | ||||||||||||||||| || ||| ||||| ||||||||||||    
T  46700061 gtcttgtcgtggtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgcagatccggaagc 46700160  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| ||||  | ||| ||||||||||||||||||||| ||| ||  ||||| |||| |||| |||||||| ||||| |||||    
T  46700161 atggatatttcggtgacttagattttatcatattatttataggca--ttttgccgttatatgctattaactagggtgttgtga 46700241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 29617781 - 29617616
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtc-aac 133  Q
    ||||||||||||| | |||||||||  ||| | ||||| ||| ||||||||||||| ||| |  |||| | ||||| ||||| | |||| |||||| |||    
T  29617781 cgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaattacagattaaatcagtaatttatgcgtcgaac 29617682  T
Q  134 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| | ||  |||| ||||||||||  ||| | ||||||||||||||||||||||||||||||||    
T  29617681 gttgaaaatatggaaacatgggtatttcgatcacttagattttatcatattatttgtagacatttt 29617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19296849 - 19297044
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  19296849 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 19296945  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | | | |||  |||||||||||||||||||| ||||||    
T  19296946 attacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcatttt 19297044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 34899719 - 34899492
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  34899719 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 34899623  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| | || ||||||||||||||||  | ||| |||  |||||||||||||||||||  ||  |||    
T  34899622 attacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgtatgca--ttt 34899525  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| ||||||||||| || |||||    
T  34899524 tgccgttgtatgctattaacttggatgttgtga 34899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 1769221 - 1769115
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| |||||||| || ||||||| ||||||| |||||||||||||||||||  ||| ||||||| ||||| ||||||||| ||||| |  | |||||||    
T  1769221 gttcatattgaaaaattatcttcagtcaatcacagattcaatcaatgatttgaacgtgaacgttgcagatctggaagcatgagtattattgtaatttaga 1769122  T
Q  173 ttttatc 179  Q
    |||||||    
T  1769121 ttttatc 1769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 40993261 - 40993363
Alignment:
Q  129 tcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtga 228  Q
    ||||||||| | || | ||||||||||||||  | ||| |||  |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||     
T  40993261 tcaacgttgcatattcagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt--gtcgttgtatgttattaacttgggtgt 40993358  T
Q  229 tgtga 233  Q
    |||||    
T  40993359 tgtga 40993363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 969557 - 969469
Alignment:
Q  6 ggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatctt 94  Q
    |||| |||||||||||||||||  || | ||||||||||||||| ||||| |||||||| | ||||||||| |||||||| ||||||||    
T  969557 ggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatcatctt 969469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 25287298 - 25287103
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||| ||| ||   ||||||    |||||| |||||| || |||  |||||||||||||||   | ||| |||    
T  25287298 agtgtggcgttgtgttgttcgtcgtcttgtgcgacatt---tgatttcacatcttgtcgcggtgttcatttacttcttattgaaagattgacatcaatca 25287202  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | ||||||||||||||||| |||||||  ||  ||||| | |||||||| ||||  | ||| ||||||||||||||||||||||||| ||||||    
T  25287201 attacaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgacttagattttatcatattatttgtagccatttt 25287103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 39229004 - 39229189
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||    ||||| | ||||||||| | || ||||||||||  ||||||||||||| ||||| ||||| | |||||    
T  39229004 tgtgttgttcgtcgtcttgtgcggcgtta---gatttcgcgtcttgttgtgatg-tcgtttggtttctattgaaagatcaacttcagtcaattacagatt 39229099  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    ||| | |||| ||| ||||| |||||| ||||| ||||||||| |||||     || ||||| |||||||||| |||||||| |||||||    
T  39229100 caaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggacttagaatttatcatataatttgtaggcattttt 39229189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 11343836 - 11343976
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||||||||| | ||||||||| ||||||||||| |  |||| ||||| | | ||| ||| |||||||||  ||||||||||| |||||| |||      
T  11343836 gtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatcc-gaaaa 11343934  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||| ||||| || ||||||| ||||||  |||||||||||||    
T  11343935 atgagtattttggtgatttatattttacaatattatttgtag 11343976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26623902 - 26623810
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    ||||||||| ||||||||||||||||| ||   |||  |||||||||||  ||||||||||||| | ||||||||| ||||||||||||| |||||    
T  26623902 agtgcggcgttgtgttgttcgtcgtcttgt---acggcgtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttca 26623810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30756931 - 30756710
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||  ||||||||||||  | ||| |||    
T  30756931 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctacatcagtca 30756835  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||| |||||  | ||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||| ||| ||  |||    
T  30756834 attacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggca--ttt 30756737  T
Q  201 tgtcgttgtatgttattaacttgggtg 227  Q
    ||||||| |||| | ||||||| ||||    
T  30756736 tgtcgttttatgctgttaacttaggtg 30756710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 39328898 - 39328678
Alignment:
Q  5 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    ||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| |    
T  39328898 cggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaatta 39328802  T
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtc 204  Q
     | |||||| |||||||||| |||||||||||| ||||||| ||||||| | ||   | ||| |||| ||||||||   ||||||||| ||  ||||| |    
T  39328801 caaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttaggttttatca---tatttgtaggca--ttttgcc 39328707  T
Q  205 gttgtatgttattaacttgggtgatgtga 233  Q
    ||| |||| |||||||||||||| |||||    
T  39328706 gttttatgctattaacttgggtgctgtga 39328678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 13592498 - 13592385
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcgt 206  Q
    |||||||||| |||||| |||||||||||| ||||||||| |||||||||||||| | | ||  |||||||||||| | ||||||| ||  || ||||||    
T  13592498 attcaatcaaagatttgagcgtcaacgttgcagatccggatgcatgggtattctggtcactttaattttatcatatatttttgtaggca--ttatgtcgt 13592401  T
Q  207 tgtatgttattaactt 222  Q
    | |||| |||||||||    
T  13592400 tatatgctattaactt 13592385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 22087330 - 22087430
Alignment:
Q  38 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 137  Q
    |||||||||| |||||||||||| ||| | ||||| | | ||||||||||||| ||||| ||||| | | ||||||||||||| ||| | ||||||||||    
T  22087330 tgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttg 22087429  T
Q  138 t 138  Q
    |    
T  22087430 t 22087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 5078421 - 5078342
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    |||||| |||||||||  ||||||| ||| | ||||| ||||||| ||||| |||||||||||||||||||||| |||||    
T  5078421 ttcaataaatgatttggacgtcaactttgcatatccgaaagcatgagtattttgatgatttagattttatcatactattt 5078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 25068178 - 25068225
Alignment:
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  25068178 atccggaagcatgggtgttttgatgatttagattttatcatattattt 25068225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27997067 - 27997205
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||  ||||||||||||| ||| |||  || |||||| ||||||  ||||||||| ||| ||||||| ||| ||||||||||||| |||   |||    
T  27997067 agtgcggcattgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatattgaaagatcaactt---tca 27997163  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagat 142  Q
    || ||| ||| | ||||||||||| |||| ||||||| ||||    
T  27997164 attataaattaagtcaatgatttgggcgtgaacgttgcagat 27997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 4530090 - 4530236
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| |||||||||||||| ||  || |||  | ||||||||||| ||||| ||| | | | |||||||| | |||||  |||| |||||||     
T  4530090 gtttgattttgcgtcttgttgcggtgttcaattagttactgttgaaagatcaacttcagtcagttacaaattcaatccaagatttaggcgtaaacgttgg 4530189  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatatta 185  Q
    | |||| |||||||||||||| |  | | ||||||||||||||||||    
T  4530190 atatccagaagcatgggtatttttgtaacttagattttatcatatta 4530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 3398329 - 3398395
Alignment:
Q  164 tgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtg 232  Q
    ||||||||||||||||||||||||| ||| ||  ||||  ||||||||||||||||||||| |||||||    
T  3398329 tgatttagattttatcatattatttttaggca--ttttaccgttgtatgttattaacttggatgatgtg 3398395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 5792810 - 5792959
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | |||||||  | ||| |||||| |||| ||||||||||||  | ||| ||||| | |  || |||||||||||||  |||||||||||     
T  5792810 gtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttgc 5792909  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    ||||| ||||||||  | |||  ||||| ||| |||||||||||||||||    
T  5792910 agatctggaagcataagaatttcgatgacttatattttatcatattattt 5792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1749266 - 1749140
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||||||||| ||| | | ||||||||||| |  ||  ||||||  || || ||||||||||| ||||||||||||| |||||    
T  1749266 agtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtattgaaagatcagcttca 1749167  T
Q  97 ctcaatcatagattcaatcaatgattt 123  Q
      |||||| | ||||||||||||||||    
T  1749166 gacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 24610235 - 24610148
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    |||||||||||||| |||||| |||| |||| ||| ||||  |||| || |||| ||||||||||||||||||| |  ||||||||||    
T  24610235 gtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaatcaatgatttgggtttcaacgttgt 24610148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 17611129 - 17611206
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    |||||| |||||||||| ||| |  ||||||||||||| ||||||||||| ||| || |||| ||| |||||||||||    
T  17611129 tgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaaagat 17611206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 28407861 - 28407803
Alignment:
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||| || |||||    
T  28407861 ttttatcatattatttgtagaca--ttttgccgttgtatgctattaacttggatgctgtga 28407803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5775182 - 5775301
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||| ||||||  || | | || |||||||| | |||||||||| ||| | ||||||||| ||| |||||||||  |||| |||    
T  5775182 agtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatatcgaaagatcagattcagtca 5775280  T
Q  101 atcatagattcaatcaatgat 121  Q
    |||| | | ||||||||||||    
T  5775281 atcacataatcaatcaatgat 5775301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||| |||||||||  ||||| |||||||| || |||| ||| ||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 43369762 - 43369649
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||||||||| |||   | ||||||||| ||||||||| ||||| |||||||  | | ||  ||||||||||||||||| ||| ||  ||||| ||||    
T  43369762 attcaatcaatggttttgtcatcaacgttgcagatccggatgcatgagtattctagtcactttaattttatcatattatttataggca--ttttgccgtt 43369665  T
Q  208 gtatgttattaacttg 223  Q
    ||||| ||||||||||    
T  43369664 gtatgatattaacttg 43369649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 46822692 - 46822628
Alignment:
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||||||||| ||  ||||||| ||||||| ||||||||||| || |||||    
T  46822692 atttagattttatcatattatttgtag-ca--ttttgtcattgtatgctattaacttggatgttgtga 46822628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25068061 - 25068147
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||| |||||||||||||| || ||| |  ||| ||| ||||||  ||||||||||||| |||||| |||| |||||||||||    
T  25068061 agtgcggcgttgtgttgttcgtcg-cttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 90  Q
    ||||||||||||| ||| ||| | ||||||||||||||  || |||||| |||| || |||| ||| |||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 42067052 - 42067010
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||||| |||||| |||||||||||| ||||||||||||    
T  42067052 attcaatcaaagatttgggcgtcaacgttgcagatccggaagc 42067010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 46244196 - 46244149
Alignment:
Q  172 attttatcatattatttgtagacattttttgtcgttgtatgttattaact 221  Q
    ||||||||||||||||||||| ||  ||||||| ||||||||||||||||    
T  46244196 attttatcatattatttgtaggca--ttttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||| | ||| | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    |||||||||||||||  || | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 34773717 - 34773793
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    |||| ||||||||||  || | |||||||||||||  |||||| |||||||| || |||| ||| ||||||||||||    
T  34773717 tgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatc 34773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 45199023 - 45198947
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | | | || |||||||||||||    
T  45199023 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttgattttatcatat 45198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  | ||||| || |||| ||| ||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 30493507 - 30493737
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| |||   ||||||||||||| || |||||||  |||| ||||||||||| ||||||||||||| ||||| |||    
T  30493507 agtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaacttcagtca 30493606  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||  | |||||||||||||||||  ||||||||||| | ||||||||||||||||||| || ||||||| |||||||||| || ||||||| ||  |||    
T  30493607 atctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatattttatcatgttgtttgtaggca--ttt 30493704  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| ||||||| |||||| |||||    
T  30493705 tgccgttgtatgctattaacctgggtgttgtga 30493737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 546001 - 546236
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || || |||||||||||||| ||| |||||||||||||||    | | ||||||  ||||| ||||||||||| ||||||||||||| |||||    
T  546001 agtgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 546100  T
Q  97 ctcaatcataga-ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagaca 195  Q
      |||||| | | |||||||||||||||| |||||||||||| |||||| ||||||||||||||||| || ||||||||| |||||||||||||||| ||    
T  546101 gacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatattatttgtaggca 546200  T
Q  196 ttttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
      ||||| ||||||||| |||||||||||||| |||||    
T  546201 --ttttgccgttgtatgctattaacttgggtgctgtga 546236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 8102707 - 8102931
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    |||||| |||||||||| ||| | ||||||||||||| |  |||| |    ||||||| | ||||||||| ||||||||||||| |||||  |||||| |    
T  8102707 tgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcaca 8102806  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||| ||||||||||| |||||||||||| |||||| ||| ||||  ||||||||||||||||||||||||||||||||||||| ||  ||||| |||    
T  8102807 aattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagattttatcatattatttgtaggca--ttttgccgt 8102904  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
     | |||||||||||||||||| |||||    
T  8102905 ggaatgttattaacttgggtgctgtga 8102931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 14801808 - 14802032
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| | || ||||||||||||| |||| |    ||| ||| ||||||||||| ||||||||||| | |||||  |||||| |    
T  14801808 tgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 14801907  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||||||||||||||| |||||||||||| |||||| |||| ||| ||||| || |||||||||||| |||||||||||||||| ||  ||||| |||    
T  14801908 aattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttcatcatattatttgtaggca--ttttgccgt 14802005  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| ||||||||||| || |||||    
T  14802006 tgtatgctattaacttggatgctgtga 14802032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 1933802 - 1933622
Alignment:
Q  6 ggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcat 105  Q
    |||| ||||||| | ||||||| ||| | | |||||||||||||||||| ||||||||| | ||||||||| |||  |||||||| ||||| |||||||     
T  1933802 ggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcac 1933703  T
Q  106 agattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattat 186  Q
    |||||||||||||||||||  ||||||||||| |||||||||| ||||  ||||||| ||||||| |||||||||||||||    
T  1933702 agattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcatattat 1933622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 26588587 - 26588389
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||| | ||||||| ||| | |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||| ||||| |||    
T  26588587 agtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtca 26588488  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| | ||||||| |||||||||   |||||||||| | |||| |||||||| |||||  | |||||| |||||||||||||||||| ||||||||||    
T  26588487 atcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatattatttttagacatttt 26588389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31296795 - 31297021
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||| || ||| ||| | |||||||||||||||  ||||||||| ||| || |||| ||| |||||||| ||||  |||| |||    
T  31296795 agtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagtca 31296894  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||  | |||||||  |||||||   ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||| ||  |||    
T  31296895 atccaatattcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtaggca--ttt 31296992  T
Q  201 tgtcgttgtatgttattaacttgggtgat 229  Q
    |||||||||||| |||||| |||| ||||    
T  31296993 tgtcgttgtatgctattaatttggatgat 31297021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 1523440 - 1523608
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| |||||||| |||| ||| |  |||||  |  ||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  1523440 tgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggta 1523539  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtga 228  Q
    ||||| ||||||||||||||||||||||||||||| ||  ||||||||| | ||| |||||||||||||||    
T  1523540 ttctggtgatttagattttatcatattatttgtaggca--ttttgtcgtggaatgctattaacttgggtga 1523608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23128596 - 23128823
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||||| ||||   |||||| | || |||| || ||| | |||  |||||||||||||||||| | ||| |||    
T  23128596 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaacatcagtca 23128692  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||||||||||||||   ||||||||||||||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  23128693 attacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttt 23128790  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||| ||||||| |||||    
T  23128791 tgccgttgtatgctattaatttgggtgctgtga 23128823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 34185808 - 34185578
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||  |||| |||| ||||||| ||||||||||||||||||||| ||||||||| |||| || ||| |||| ||||||||||||| |||||        
T  34185808 agtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaagatcaacttcaggtg 34185709  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    ||||   |||||||||||||||||  ||||||| ||| | | |  ||| ||||||||||||| |||||||||||||||||||||||||||||   | |||    
T  34185708 atcacgaattcaatcaatgatttggacgtcaactttgcaaaactagaatcatgggtattctggtgatttagattttatcatattatttgtag--gtattt 34185611  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| | |  ||| ||||||||||||||||    
T  34185610 tgtcgttatgtactatcaacttgggtgatgtga 34185578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 528465 - 528249
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||||| || |||||| || ||| ||| ||| | |||||||||||||||||||||||||| ||| | |||| |||||||| ||||||||| ||||| | |    
T  528465 agtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttcttatcgaaagatcagcttcagtaa 528366  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | ||| ||||||| ||||| |||||||||||| |||| | |||| ||  |||||||  |||||||||||||||||||||||||||||   | |||    
T  528365 attacatatttaatcaattatttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttagattttatcatattatttgtag--gtattt 528268  T
Q  201 tgtcgttgtatgttattaa 219  Q
    |||||||||||| ||||||    
T  528267 tgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 233
Target Start/End: Original strand, 28981156 - 28981382
Alignment:
Q  5 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    ||||| |||||||||||||||||  || |  ||||||||||||||| |||||||| |||| ||||||||||| |||| |||||| |  || | |||||||    
T  28981156 cggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatca 28981255  T
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtc 204  Q
     |||||||||||||||| |   ||||||| ||| ||||||| ||| ||||||||| || | |||||||||||||||||||  ||||||  |  ||||||     
T  28981256 cagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatattgcttgtaggaa--ttttgtt 28981353  T
Q  205 gttgtatgttattaacttgggtgatgtga 233  Q
    |||||||| ||||||||| |||| |||||    
T  28981354 gttgtatgctattaactttggtgttgtga 28981382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 29255547 - 29255364
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| |||  ||   |||||| |||||||||| | |||||| |||||| |||| |||||||||||| || ||| ||||| | | |||    
T  29255547 tgtgttgttcgtcgtcttgtgcaac---gtttga-tttgtgtcttatcgcggtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaatt 29255452  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattt 198  Q
    |||||||||||||| |||||||||||  |||||||||| ||||||||||  | ||| ||||||||||||||||||||||||| |||||    
T  29255451 caatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcattt 29255364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 233
Target Start/End: Original strand, 9380031 - 9380228
Alignment:
Q  34 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac 133  Q
    ||||| ||||||||   ||||||||||| || | ||||||| |||||||||||| ||  || | ||||||| |  |||||||||||||||||| |||||     
T  9380031 acgttctttgatttcacgtcttgttgcgatgattgtttggtacttattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtcaat 9380130  T
Q  134 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||  ||  ||||||||||||||  ||||| ||||| || |||||    
T  9380131 gttgtagattcagaagcatgggtattttggtgatttagattttatcatattatttgtatgca--ttttgtcgttgtattctattatcttggatgttgtga 9380228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3913686 - 3913459
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| |||  |||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  3913686 agtgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatca 3913590  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||   ||||||||||| |||||| ||||||||||||||  | |||||||| |||||||||||||||||||| ||  |||    
T  3913589 attacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtaggca--ttt 3913492  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || | ||||||| |||||||||||||| |||||    
T  3913491 tgccattgtatgctattaacttgggtgttgtga 3913459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 31852231 - 31852092
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||| ||||| |||| || ||||| |||||||||||||  |||||| |||| ||||||||||||||| |||||||| ||||||| ||||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttta 31852132  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaa 219  Q
    ||||||||||| ||||||  |||||| |||||||| ||||||    
T  31852131 tcatattatttatagaca--ttttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 30776710 - 30776868
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||| |||||  |||||| | ||||| ||||||||||| |||| ||||||| | |||  ||||||||||||||||| |||||||||    
T  30776710 gttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttaga 30776809  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||| ||  ||||| ||| | ||| |||||||||||||| |||||    
T  30776810 ttttatcatattatttgtaggca--ttttgccgtggaatgctattaacttgggtgttgtga 30776868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 127648 - 127842
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||| ||| ||||||||||||||||| ||||||| ||   |||||| | || |||| |||||| || ||| |||| ||||||||||||  | ||| |||    
T  127648 agtgcagcgttgtgttgttcgtcgtcttgtgtgacatt---tgatttcgcgt-ttgtcgcggtgttcatttagttcctattgaaagatcgacatcagtca 127743  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||| |||||||||||| |||||||||||| |||| |||||||||| |||||  | ||||||||||||||||||||||||||||| ||||||    
T  127744 attacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcatttt 127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 7976282 - 7976072
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | |||| ||| ||| || ||||||||| |||| |||||| |||| |||| ||||||||          |||| |||||    
T  7976282 tgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaagatca----------atcacagatt 7976193  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    |||| ||| |||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||   ||||||| ||  ||||| |||||||    
T  7976192 caattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggca--ttttgccgttgta 7976095  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||| |||||    
T  7976094 tgctattaacttaggtgttgtga 7976072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 233
Target Start/End: Original strand, 679095 - 679313
Alignment:
Q  12 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 111  Q
    |||||||||||| |||  || | ||| ||||  ||||| ||||||||| |||  |||||||||| |||||||||| |||  |||| ||||||| | ||||    
T  679095 gtgttgttcgtcatcttatgcggcgtagtttagttttgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattc 679194  T
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtat 211  Q
    ||||||||||||| ||| |||| ||| | ||| |||||||||  |||||||| ||||||||||||||||||||||| | | |||||||    ||||||||    
T  679195 aatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgacgatttagattttatcatattattcgcaaacatttt---gcgttgtat 679291  T
Q  212 gttattaacttgggtgatgtga 233  Q
    | ||||||||| |||| |||||    
T  679292 gctattaacttaggtgttgtga 679313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 12170481 - 12170673
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||   ||||||||||     
T  12170481 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgc 12170580  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||  | |||||||| ||| |||||||||||||||| ||  |||||  |||||||| |||||||||||||| |||||    
T  12170581 agatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggca--ttttgctgttgtatgctattaacttgggtgctgtga 12170673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32191843 - 32191647
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||| | || ||||| ||||||||| ||| || | ||||| ||||| || |||||||| | |||||| |  | ||||| |||    
T  32191843 agtgcggcgttgtgttgttcgttgacttgtgtggcgttgtttggtttcgtatattgtttcggtgttcatttggttcatcttgaaaaa--agcttcagtca 32191746  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| | |||||||||||||||||  || |||||||| | ||||| ||||||| | |||||| |||||||||||||||||||  |||||||| ||||||    
T  32191745 atcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttgtaggcatttt 32191647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3355095 - 3355290
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||| ||| ||||||||||   |||||| | ||||||||| |||| |||||| |||| ||||||||| ||  | ||| |||    
T  3355095 agtgcggtgttgtgttgttcgtcctcttgtgtgacgtt---tgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggtcgacatcagtca 3355191  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || ||| ||||||| |||||||||  ||||||| ||| ||||||||||||||| |||||    ||| |||||||||||| |||| |||| |||||||||    
T  3355192 attataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatcctattgtttggagacatttt 3355290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 33053280 - 33053053
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  33053280 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 33053184  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||    ||| |||  |||||||||||||||||||| ||  |||    
T  33053183 attacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggca--ttt 33053086  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| ||||||||||| || |||||    
T  33053085 tgccgttgtatgctattaacttggatgctgtga 33053053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 30894613 - 30894772
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||  |||||| |||||| |||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||      
T  30894613 gtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttac 30894712  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||| ||||||| ||||||  ||||| |||| |||||||||||||||||||| ||||||    
T  30894713 agatccagaagcat-ggtatttcgatgaattaggttttatcatattatttgtagtcatttt 30894772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 34018538 - 34018733
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||| ||||||   ||||||  |||||||| |||||| |||||| |||| ||||||||||||    ||| | |    
T  34018538 agtgtggcgttgtgttgttcgtcgtcttgtgagacgtt---tgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatcgagatcagtta 34018634  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | ||||||  ||||||||| |||||||||||| ||||||||||||||| |||||    ||| |||  |||||||||||||||||||| ||||||    
T  34018635 attacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcatttt 34018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 606182 - 606409
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||| ||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  606182 agtgcggcgttgtgttgttcgtcatcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtca 606278  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || ||| |||||| ||||||||||  | ||||||||| |||||||||| ||||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  606279 attataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttt 606376  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || | ||||||| |||||||||||||| |||||    
T  606377 tgccattgtatgctattaacttgggtgctgtga 606409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 29743076 - 29743205
Alignment:
Q  105 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtc 204  Q
    ||||||||||||||||  || |||||||||||| ||||||||||||  | |||||||| |||||||||| |||||||||||||| ||| ||  |||||||    
T  29743076 tagattcaatcaatgacgtgggcgtcaacgttgcagatccggaagctagagtattctggtgatttagatcttatcatattatttataggca--ttttgtc 29743173  T
Q  205 gttg---tatgttattaacttgggtgatgtga 233  Q
    ||||   |||||||||||||||| || |||||    
T  29743174 gttgtaatatgttattaacttggttgttgtga 29743205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7515314 - 7515118
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| | | ||||||   |||||| | ||||||| |||||| | |||| |||| ||||| || |||  | |||||||    
T  7515314 agtgcggcgttttgttgttcgtcgtcttgggcgacgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaatatctacatcactca 7515218  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||  |||||||||||| | ||||||||||||| ||||   | ||| |||| |||||||||||||||||||| |||||||    
T  7515217 attacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtaggcattttt 7515118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 20225903 - 20226049
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||| ||||||| ||||| ||| | | | ||||||||||||||||  ||| | |||||| |||| | |||||||| |||||  ||||| ||||| ||||    
T  20225903 tattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattta 20226002  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||||||||    
T  20226003 tcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggt 20226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 22119887 - 22120033
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||| ||||||| ||||| ||| | | | ||||||||||||||||  ||| | |||||| |||| | |||||||| |||||  ||||| ||||| ||||    
T  22119887 tattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattta 22119986  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||||||||    
T  22119987 tcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggt 22120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 27097690 - 27097559
Alignment:
Q  68 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgat 167  Q
    ||||| ||| ||||||||||| |  || | |||||||||||||||||||||||||||  ||||||| ||| | ||||| || ||||| |||| || ||||    
T  27097690 gtttgattcatattgaaagattagttttagtcaatcatagattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattttggtgat 27097591  T
Q  168 ttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||||||| | ||| ||||||    
T  27097590 ttagattttatcatattatctctaggcatttt 27097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 4010587 - 4010430
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||| ||| ||||||| || | ||||| ||| |||||||||||||| | || ||||| | | ||||||||||||||||| | ||  |||||| |    
T  4010587 tttgattttgcgtcatgttgcgatgtttgtttgattcctattgaaagatcatat-caatcaattacatattcaatcaatgatttgggtgttgacgttgca 4010489  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattt 198  Q
    |||||||||||||| |||||  | ||| ||||| ||||||||||||||| ||| |||||    
T  4010488 gatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 30608616 - 30608400
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   |||||||| || |||| || ||| || ||| |||| ||||||||||||  | | | ||||| | | |||    
T  30608616 tgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgt-ttgtcgctgtgttcatttagttcctattgaaagatcgacataagtcaattacaaatt 30608521  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||| |||||||||| | |||||||||| ||||| |||| ||||||||||  | ||| ||| ||||||||||||||||||||| ||  ||||  |||||||    
T  30608520 caaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggca--ttttaccgttgta 30608423  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || ||||||||||| || |||||    
T  30608422 tgctattaacttggatgttgtga 30608400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32327329 - 32327134
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| |  ||   ||  ||||||||||||  | ||| |||    
T  32327329 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatca 32327233  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| |||||||||   ||| ||||||| ||||||||||||||| ||| | || |||||||| |||||||||||||||||||| ||||||    
T  32327232 attacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcatttt 32327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 34222812 - 34222958
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| ||||||||||| |||  || |||||||| || |||||||||| ||||| |||||||| |||||||      |||||  |||||| |||| |    
T  34222812 tttgatttcgtgtcttgttgtggttttcatttggttcataatgaaagatcaacttcattcaatcatggattcaa------atttggacgtcaaagttgca 34222905  T
Q  140 g---atccggaagcatgggtattctgatgatttagattttatcatattatttg 189  Q
    |   |||||||||| || ||||||||  |||||||||||||||||||||||||    
T  34222906 gcagatccggaagcctgtgtattctggcgatttagattttatcatattatttg 34222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 68009 - 67886
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||| ||||||| ||| ||||||| |||||||||| ||||||||||  |  || |||  |||||||||||||||| ||| ||||||  | ||||    
T  68009 attcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattatttataggcatttt--gccgtt 67912  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||||| |||||    
T  67911 gtatgctattaacttgggtgctgtga 67886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 29319955 - 29319806
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| | |||   ||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  |||||||||||     
T  29319955 gtttgatttcgcgtcttgtcgcggtgtttgttaacttcatattgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgc 29319856  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattattt 188  Q
    | ||||||||||||| ||||| || ||| |||  ||||||||||||||||    
T  29319855 aaatccggaagcatgtgtattttggtgacttaagttttatcatattattt 29319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 8266717 - 8266799
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 190  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||  || | ||  |||||||||||||||||||    
T  8266717 attcaatcaatgatttgggcgtcaacattgtagacccggaggcaagggtattccaatcactttaattttatcatattatttgt 8266799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 33543693 - 33543640
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 64  Q
    ||||||||||||||||| ||| | |||||||||||||| |||||||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtg 33543640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 6957203 - 6957323
Alignment:
Q  79 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 178  Q
    ||||| |||||  ||||| ||||| | ||||||||||||||||||  || |||||||||||||| || ||  |||| |||||  |||| ||| |||||||    
T  6957203 attgatagatcgacttcagtcaataacagattcaatcaatgatttaggcatcaacgttgtagattcgaaaatatggatattccaatgacttatattttat 6957302  T
Q  179 catattatttgtagacatttt 199  Q
    || || |||||||| ||||||    
T  6957303 cacatgatttgtaggcatttt 6957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 17346632 - 17346522
Alignment:
Q  12 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 111  Q
    |||||||||||||||| |||||| ||||||||||||  | | ||| |||  || || |||||||| || |||||||||  | ||||||||| |  |||||    
T  17346632 gtgttgttcgtcgtcttgtgtgatgttgtttgatttcttattttggtgcaatgttcatttggttcctaatgaaagatcgacatcactcaattagtgattc 17346533  T
Q  112 aatcaatgatt 122  Q
    |||||||||||    
T  17346532 aatcaatgatt 17346522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 19164687 - 19164757
Alignment:
Q  2 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttg 72  Q
    |||||||| ||||||||| ||||||| ||| ||  ||||||||||||||||| ||||| |||| |||||||    
T  19164687 gtgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgtggtgatcgtttg 19164757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 22571459 - 22571533
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 85  Q
    ||||||||||||||||| ||| | ||||||||||||||| || |||||  |||| ||||||||||  ||||||||    
T  22571459 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaa 22571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| | | |  |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 9341594 - 9341536
Alignment:
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| ||||||| ||||||  ||||||||||| |||||||||||||| |||||    
T  9341594 ttttatcatattgtttgtaggcatttt--gtcgttgtatgctattaacttgggtgttgtga 9341536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 147
Target Start/End: Complemental strand, 8196397 - 8196358
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccgga 147  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  8196397 attcaatcaacgatttgggcgtcaacgttgtagatccgga 8196358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 21426622 - 21426571
Alignment:
Q  180 atattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||  | ||||||||| |||||||||||||| |||||    
T  21426622 atattatttgtagacatttt--gccgttgtatgctattaacttgggtgctgtga 21426571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 33543612 - 33543523
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat-tatttgtagacatt 197  Q
    ||||||||||  ||||| | ||||| |||| |||||||||||||||||||||| ||  ||||| ||||||| |||| | ||||||||||||    
T  33543612 attcaatcaaaaatttgggtgtcaatgttgcagatccggaagcatgggtattccgaccattta-attttattatatatttttgtagacatt 33543523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 14846195 - 14846138
Alignment:
Q  142 tccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||||||||| | ||| || ||| |||| |||||||||||||||||||| ||||||    
T  14846195 tccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggcatttt 14846138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||    |||| |||||||| || |||| ||| ||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 32174625 - 32174657
Alignment:
Q  112 aatcaatgatttgtgcgtcaacgttgtagatcc 144  Q
    ||||||||||||| |||||||||||||||||||    
T  32174625 aatcaatgatttgggcgtcaacgttgtagatcc 32174657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 34489254 - 34489290
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattt 47  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgattt 34489290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 6014 - 6202
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||||||||||| | || ||||||||||| || |||||||| ||||||||  | | ||||| ||||||| | |||    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaatgttaacttcagtcaatcacatatt 6113  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||   ||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6114 caatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacatttt 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 629003 - 628808
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 134  Q
    ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||  | ||||||    
T  629003 cgttgtttgatttggaatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacg 628905  T
Q  135 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||  ||||| ||||||||  |||||||||||||| |||||    
T  628904 ttgtagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgccgttgtattctattaacttgggtgttgtga 628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 14859466 - 14859693
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||| ||| ||||||| ||   | ||||||  ||||||||||||| || |||||||| ||||||||||||| ||||| |||    
T  14859466 agtgcggtgttgtgttgttcgtcatcttgtgtgacatt---taattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatca 14859562  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| |||||||||||||| || | |||||||||||||| ||||||| || | ||  |||    
T  14859563 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagattttatcgtattattggttggca--ttt 14859660  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||| |||||||||||||| |||||    
T  14859661 tgtcgttgtatgctattaacttgggtgttgtga 14859693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 35175387 - 35175607
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||| |||||| |||   |||||||||||||  ||||||||||||||| ||||||||||  ||||||||||||| ||||| ||||||| | |||    
T  35175387 tgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatatt 35175486  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  | ||||||||| ||||||| || |||| |||||||||||||||| |||| |||||||| ||||||| ||  ||||||| |||||    
T  35175487 caatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtaggca--ttttgtcattgta 35175584  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||| ||| |||||    
T  35175585 tgctattaacttgagtgttgtga 35175607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 53807962 - 53807743
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    |||||||||||||||||  || | | ||||||||||| |  ||||||||| ||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||    
T  53807962 tgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacagatt 53807864  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||||||||||||||  ||||||||||| | |||| |||||| | |||||||| ||||||||||| ||||||||||||||||| ||  ||||| |||||||    
T  53807863 caatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca--ttttgccgttgta 53807766  T
Q  211 tgttattaacttgggtgatgtga 233  Q
    || |||||||||||||| |||||    
T  53807765 tgctattaacttgggtggtgtga 53807743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 8914691 - 8914915
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| | || ||||||||||||| |||| |    ||| ||| ||||||||||| ||||||||||| | |||||  |||||| |    
T  8914691 tgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 8914790  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||||||||||||||| |||||||||||| |||||| |||| ||| |||||||| |||||||||||| |||||||||||||||| ||  ||||| |||    
T  8914791 aattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttcatcatattatttgtaggca--ttttgccgt 8914888  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||| |||||||||    
T  8914889 tgtatgctattaacttgagtgatgtga 8914915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 51923706 - 51923930
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||| ||| ||| | |||| ||||||||||  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||  |||||  |    
T  51923706 tgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcgca 51923805  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||  ||||| |||    
T  51923806 aattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggca--ttttgccgt 51923903  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||||||||||||| |||||    
T  51923904 tgtatgctattaacttgggtgttgtga 51923930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 51303701 - 51303528
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||  ||||||||||||| ||||   |||||| | ||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  51303701 tgcggtgttcgtttggtttgtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggta 51303602  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||| |||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  51303601 ttctggtgatttagatttcatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgttgtga 51303528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4821781 - 4822009
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||| ||||||||||||| || |||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||| | |||    
T  4821781 agtgcggtgttgtattgttcgtcgtcttgt-tgacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtca 4821879  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||||| ||||||||  |  |||||||  | ||||||| |||||||||||||| ||||||| |||| |||||||| ||||||| ||  |||    
T  4821880 atcacatattcaatccatgatttggacaccaacgttacaaatccggaggcatgggtattctggtgattta-atttcatcatattttttgtaggca--ttt 4821976  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||  ||| |||| ||||||||||||||||||||    
T  4821977 tgctgttatatgctattaacttgggtgatgtga 4822009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7546583 - 7546818
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg---tgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttc 95  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |   |   ||||||  ||||| ||||||||||| |||||||||||||  |||    
T  7546583 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagtttc 7546682  T
Q  96 actcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagaca 195  Q
    |  |||||| | ||||| ||||||||||| ||||||||||||  |||||  |||||||||||||||| |||||||||||| |||||||||||||||| ||    
T  7546683 agacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgatttagatttcatcatattatttgtaggca 7546782  T
Q  196 ttttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
      ||||| ||||||||| |||||||||||||| |||||    
T  7546783 --ttttgccgttgtatgctattaacttgggtgctgtga 7546818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21289933 - 21289699
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || |||| ||||||| |||| ||| | |||||||||||||||  |||| |    ||||||| ||||||||||| ||||||||||||| |||||    
T  21289933 agtgcgacgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 21289834  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||||||||||||||  | |||||||||| |||||  ||||||||| ||||||| | |||||||||| |||||||||||||||| ||     
T  21289833 gacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttcatcatattatttgtaggca- 21289735  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||| ||||||||| |||||||||||||| |||||    
T  21289734 -ttttgccgttgtatgctattaacttgggtgctgtga 21289699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 16235395 - 16235629
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||| || ||||||||||| ||||| ||| | ||||||||||||| |  | | |||||| |  ||||||||||||||| ||||||||||| |  || |    
T  16235395 agtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagtttta 16235494  T
Q  97 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacat 196  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||  ||||||||||||||||| |||||||||||| ||||||||| |||||| ||     
T  16235495 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttcatcatattacttgtaggca- 16235593  T
Q  197 tttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
     ||||||||||||||| ||||||||||| || |||||    
T  16235594 -ttttgtcgttgtatgctattaacttggatggtgtga 16235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 36 - 201
Target Start/End: Complemental strand, 26716187 - 26716022
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    ||||||| ||||||| ||||||||||||| ||||||| ||  ||||||||||| | ||||| ||||||||| ||||||||||||||||  ||||||||||    
T  26716187 gttgtttaattttgtatcttgttgcggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgattttggcgtcaacgt 26716088  T
Q  136 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttttt 201  Q
    || |||||||||| ||| |||| | | |||||||| ||||||||||||||||||||  ||||||||    
T  26716087 tgcagatccggaatcataggtactataatgatttatattttatcatattatttgtaagcatttttt 26716022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 29922030 - 29922251
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| |||||||||   ||||| ||||||||| ||||||||| | ||||||||||||||    ||| |||| ||||||||||||| |||||  ||    
T  29922030 agtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaacca 29922129  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| ||| ||||  | ||||| ||||||||||||||||||||| ||||||| ||  |||    
T  29922130 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggca--ttt 29922227  T
Q  201 tgtcgttgtatgttattaacttgg 224  Q
    || ||||||||| |||||||||||    
T  29922228 tgccgttgtatgctattaacttgg 29922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 29971183 - 29971404
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| |||||||||   ||||| ||||||||| ||||||||| | ||||||||||||||    ||| |||| ||||||||||||| |||||  ||    
T  29971183 agtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaacca 29971282  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| ||| ||||  | ||||| ||||||||||||||||||||| ||||||| ||  |||    
T  29971283 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggca--ttt 29971380  T
Q  201 tgtcgttgtatgttattaacttgg 224  Q
    || ||||||||| |||||||||||    
T  29971381 tgccgttgtatgctattaacttgg 29971404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 27706335 - 27706117
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 106  Q
    ||||||||||||||||| ||| | |||||||| |||| |  |||| |    ||||||| ||||||||||| ||||||||||||| |||    |||||| |    
T  27706335 tgtgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcaca 27706236  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     ||||||||||||||||  |||||||||||| | ||||  |||||||||||| ||| | |||||||||| |||||||||||||||| ||  |||||||||    
T  27706235 aattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttatttagatttcatcatattatttgtaggca--ttttgtcgt 27706138  T
Q  207 tgtatgttattaacttgggtg 227  Q
    |||||| ||||||||||||||    
T  27706137 tgtatgctattaacttgggtg 27706117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 33579856 - 33580084
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||| ||| ||||||||||||||||| |||   | | ||||||||||| ||||||| |||||| ||||||  ||| ||||||||||||  | ||| |||    
T  33579856 agtgcagcgttgtgttgttcgtcgtcttgtg---catcgtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtca 33579952  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||| |||||||||||| ||||||||||||| | | |||  | |||||||| |||||||||||||||||||| ||  |||    
T  33579953 attacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatattatttgtaggca--ttt 33580050  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtgat 234  Q
    || |||| |||| |||||||||||||| ||||||    
T  33580051 tgccgttttatgctattaacttgggtgttgtgat 33580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 50194393 - 50194220
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||| ||| |||||||||| || ||||| ||||||| |||||||||| ||||||||  ||| ||||||| ||||||||||||||| |||    
T  50194393 tgcggtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagta 50194294  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||| | |||||||| ||||||| ||  ||||| |||| |||| ||||||||||| || |||||    
T  50194293 ttctggtgatttagatatcatcatattttttgtaggca--ttttgccgttatatgctattaacttggatgttgtga 50194220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 9797611 - 9797419
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||||| ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||| |||||||     
T  9797611 gtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgc 9797512  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||    |||||||  |||||||||||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    
T  9797511 agatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggca--ttttgtcgttgtatgctattaacttgggtgctgtga 9797419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 21533920 - 21533694
Alignment:
Q  2 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 101  Q
    |||||||| ||||||||||||||||| ||   |||  ||||| ||| | ||||||| |||||| | |||| |||| ||||||||||||  | ||| || |    
T  21533920 gtgcggcgttgtgttgttcgtcgtcttgt---acggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcga 21533824  T
Q  102 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttttt 201  Q
      | | |||||| |||| ||||| |||||||||||| |||||||||||||||||||||  | ||| |||| |||||||||||||||||||| ||  ||||    
T  21533823 ctacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggca--tttt 21533726  T
Q  202 gtcgttgtatgttattaacttgggtgatgtga 233  Q
    | ||||||||| |||||||||||||| |||||    
T  21533725 gccgttgtatgctattaacttgggtgctgtga 21533694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 29239316 - 29239474
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | || ||||||||||   ||||||||| |||| ||||||||||| ||||| ||||||| ||||| |||    
T  29239316 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtca 29239415  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 159  Q
    |||| ||||| |||||||||||||  |||| |||||||||||||| || ||||| ||||    
T  29239416 atcacagatttaatcaatgatttggacgtcgacgttgtagatccgaaaacatggttatt 29239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 52116057 - 52115906
Alignment:
Q  80 ttgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatc 179  Q
    ||||||||||| |||||  |||||| | ||||||||||||||||  |||||||| ||| ||||||  || |||||||||||| |||||||||||| ||||    
T  52116057 ttgaaagatcaacttcaaacaatcacatattcaatcaatgatttaagcgtcaacattgcagatccaaaatcatgggtattctaatgatttagattgtatc 52115958  T
Q  180 atattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||| ||  |||||| ||| ||||||||||||||||||| |||||    
T  52115957 atattatttgtagtca--ttttgttgttatatgttattaacttgggtgttgtga 52115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 226
Target Start/End: Original strand, 42460780 - 42460945
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    ||||||| ||||||||||| |||| ||| |||| |||||  || ||| | ||||||||||||||||| |||||||||||| |||| | ||||||||   |    
T  42460780 tgcggtgttcgtttggttcgtattcaaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaaca 42460878  T
Q  158 ttctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||| ||||||||||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||    
T  42460879 ttctggtgatttagattttatcatattatttgtaggca--ttttgttgttgtatgctattaacttgggt 42460945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 53508200 - 53508397
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgt-gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 101  Q
    ||||||| ||||||||||||||||| ||  || ||||||||||||    || ||||||| ||| ||||||||||| |||||||||||||  | || | ||    
T  53508200 tgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatcaaatccagttaa 53508299  T
Q  102 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||| |||||||||||||||||||  ||||||| ||| | ||||  ||||||| |||||   |||||||||||||||||||||||||||||| ||||||    
T  53508300 tcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatcatattatttgtaggcatttt 53508397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 26739465 - 26739252
Alignment:
Q  8 cgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatag 107  Q
    ||||||||||||| | |||| ||| | ||| |||||||||||  |||||||| | ||   ||||||||| ||||||||||| | ||||  ||||||||||    
T  26739465 cgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagattaacttcgatcaatcatag 26739366  T
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||   ||||| ||||| |||||  ||| | |||||||| |||| ||||||||||||||||||||||||||  ||  ||||| ||||    
T  26739365 attcaaccaatgattttgacgtcagcgttgcagatcaagaatcgtgggtattatgataatttagattttatcatattatttgtaagca--ttttggcgtt 26739268  T
Q  208 gtatgttattaacttg 223  Q
    ||||| ||||||||||    
T  26739267 gtatgctattaacttg 26739252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 44805053 - 44805225
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    |||||||||||||| ||||||||| | |||||||| |||||| ||| ||||||| | || |||||||| |||||  | ||||||||| | |||||  |||    
T  44805053 gtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac-tcaacgttgcaaatccgagagc 44805151  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||||||| || ||||||||||||||||||||| ||||||| ||  ||||||| ||||||| |||||||||||||    
T  44805152 atgggtattatggtgatttagattttatcatattgtttgtaggca--ttttgtcattgtatgctattaacttgggt 44805225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 45568557 - 45568330
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||||| ||||   |||||| | |||||||  ||||| | |||  |||| | |||||| | |  | ||| |||    
T  45568557 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcacggtgtttgttcagttcctgttgaaataactacatcaatca 45568461  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||| ||| |||||||||||||||| ||||  | |||||||| |||||||||||||||||||| ||  |||    
T  45568460 attacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggca--ttt 45568363  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| ||||||||||||||||||||    
T  45568362 tgccgttgtatgctattaacttgggtgatgtga 45568330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 40487301 - 40487528
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||  ||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  40487301 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtca 40487398  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||  ||||||||||  ||||||| ||| |||||||||||||| ||||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  40487399 at-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggca--ttt 40487495  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| ||||||||||||||||||| |||||    
T  40487496 tgccgttatatgttattaacttgggtgttgtga 40487528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 19339214 - 19339371
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    |||||| |||| ||||||||||||| ||| | ||||| | | ||||||||||||||||  | ||||| |||| |||||| |||||||||||||| |  ||    
T  19339214 tcgtttagttcctattgaaagatcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatt-tcgtg 19339312  T
Q  166 atttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    | ||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||    
T  19339313 acttagattttatcatattatctgtaggca--ttttgtcgttgtatgttattaacttgggt 19339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 12947389 - 12947266
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||  ||||||||||||||||| ||| | ||||||||||||| |  |||||||| |||| ||||||||||| |||||||| |||| ||||| |||    
T  12947389 agtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtca 12947290  T
Q  101 atcatagattcaatcaatgatttg 124  Q
    ||||||||||||||| ||||||||    
T  12947289 atcatagattcaatcgatgatttg 12947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 43488702 - 43488475
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    |||| |||| ||||||||||||||||| ||| | ||||   |||||| | |||||||||||||| | |||  |||  |||||||| |||  | | | |||    
T  43488702 agtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcattaatca 43488606  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || ||| |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | |||||||| |||||||||||||||| ||| |  ||||    
T  43488605 attataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggc--tttt 43488508  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||| ||||||| |||||    
T  43488507 tgccgttgtatgctattaatttgggtgctgtga 43488475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 23799918 - 23799795
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    ||||||||||||||||  |||||||||||| ||||||| || |||| |||||   |||| ||||||||||||||||||||||||| ||  ||||| ||||    
T  23799918 attcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggca--ttttgccgtt 23799821  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||| |||||    
T  23799820 gtatgttattaacttgggtgttgtga 23799795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 4396439 - 4396335
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||| ||||||| ||| ||||||||||| | ||||| |||||||||||||    
T  4396439 tgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagatt 4396340  T
Q  111 caatc 115  Q
    |||||    
T  4396339 caatc 4396335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 48199788 - 48199948
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| || |||||||| |||| ||||||||||| ||||||||||||| ||||| ||||| ||| ||| |||||||||||||  |||| ||||||     
T  48199788 gtttgatttcgtatcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgc 48199887  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    | |||| |||||||| | |||  | ||| ||||| ||||||||||||| ||||| ||||||    
T  48199888 aaatccagaagcatgtgcatttcggtgacttagaatttatcatattatctgtaggcatttt 48199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 54149078 - 54149194
Alignment:
Q  115 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgtt 214  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||  | ||| || |||||||||||||||||||||| ||  || |||||||||||| |    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggca--ttatgtcgttgtatgct 54149175  T
Q  215 attaacttgggtgatgtga 233  Q
    |||||| ||||||||||||    
T  54149176 attaacctgggtgatgtga 54149194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 242
Target Start/End: Original strand, 21431663 - 21431825
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||  | ||| ||||| | | |||||| ||| ||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||    
T  21431663 tattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttta 21431762  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtgatattcttcg 242  Q
    ||||||||||||||| ||  ||||| ||||||||| |||||||||||||| ||||| ||| ||||    
T  21431763 tcatattatttgtaggca--ttttgccgttgtatgatattaacttgggtgctgtgagattgttcg 21431825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36461543 - 36461348
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| |||    
T  36461543 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctacatcaatca 36461447  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    || | | |||||| ||||||||||  ||||||||||  ||||| ||||||||| |||||  |  ||||||| |||||||||||||||||||| ||||||    
T  36461446 attacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcatattatttgtagccatttt 36461348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 9998443 - 9998670
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||| |||| | ||||||||||  | ||| |||    
T  9998443 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtca 9998539  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||   |||||| |||||| ||||||||||||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  9998540 attacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttt 9998637  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  9998638 tgccgttgtatgctattaacttgggtgctgtga 9998670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 4169875 - 4169964
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||||| ||||||||| ||||||||||| || ||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  4169875 ttcaattaatgatttg-gcgtcaacgttataaatctggaagcattggtattctaatgatttaaattttatcatattatttgtagacatttt 4169964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 41818195 - 41818418
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcat----a 106  Q
    ||||||||||||||||| ||| |   ||||||||||| | ||||||||| | || ||||||| ||| ||||||||||||| ||||| ||||||||    |    
T  41818195 tgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgtttg-ttcctattgaaagatcaacttcaatcaatcatttaca 41818293  T
Q  107 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgt 206  Q
     |||||||||||||||||   ||||| |||| ||||||  || ||| |||||| || || ||| ||||||||| |||||||||||| ||  |||||| ||    
T  41818294 aattcaatcaatgatttgaatgtcaatgttgcagatccaaaaacattggtattatggtggttttgattttatcgtattatttgtaggca--ttttgttgt 41818391  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    || ||| ||||||| | ||||||||||    
T  41818392 tgcatgctattaacattggtgatgtga 41818418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 52923229 - 52923002
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc-atcttcactc 99  Q
    |||| |||||||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | |||||||||| || || | ||    
T  52923229 agtgtggcgctgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctatatt-agtc 52923134  T
Q  100 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  ||    
T  52923133 aattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--tt 52923036  T
Q  200 ttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||  ||||||||| ||||||||||| || |||||    
T  52923035 ttaccgttgtatgctattaacttggctgctgtga 52923002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 53099871 - 53099983
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttg 208  Q
    |||||||||||||||| |||||||||||  | ||||||||||||| | ||||   ||| |||||||||| |||||||||||||| ||  |||||||||||    
T  53099871 ttcaatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgacttagattttagcatattatttgtag-ca--ttttgtcgttg 53099967  T
Q  209 tatgttattaacttgg 224  Q
    ||||||||||||||||    
T  53099968 tatgttattaacttgg 53099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 6954808 - 6954581
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||| ||||||||||||| ||| | ||||   |||||| | || ||||  ||||| | |||  |||| ||||||||||||  | ||| |||    
T  6954808 agtgcggcgttgtattgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctacatcagtca 6954712  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  |||||| | || |||||||||||||||||||||  | ||| |||  |||||||| ||||||||||| ||  |||    
T  6954711 attacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggca--ttt 6954614  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  6954613 tgccgttgtatgctattaacttgggtgctgtga 6954581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 32701502 - 32701694
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | || |||||||| || | |||  |||| ||||||||||||  | |||  |||| | | ||||||||||||||||| |||||||||||||    
T  32701502 gtttgatttcgcgttttgttgcgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgt 32701601  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||||||||  |  || |||  |||||| ||||||| ||||| ||  ||||| ||||||||| ||| ||||||| || |||||    
T  32701602 agatccggaagcatgggtatttcggcgacttaagttttatgatattatctgtaggca--ttttgccgttgtatgctatgaacttggatgctgtga 32701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 45424809 - 45424968
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | || ||||||||||| | |||| |||| |||||||| |||  | ||  ||||| | | ||||||||||||||||| |||||||| |||     
T  45424809 gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaacattgc 45424908  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattt 198  Q
    |||||||||| |||||||| |  | ||| || |||||||||||||||||||||| |||||    
T  45424909 agatccggaatcatgggtacttcggtgacttcgattttatcatattatttgtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 25461116 - 25460931
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtct--tgttgcggtgctcgtttggttcttattgaaagatcatcttcact 98  Q
    ||||||||| | |||||||||||||||  || ||||||||||||||||||||||  |||||| ||| ||||||| |||  ||||||||||||  || |      
T  25461116 agtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgtgttgctgtgttcgtttgtttcacattgaaagatcaaatttagc 25461017  T
Q  99 caatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 184  Q
    |||| | | ||||||||| ||||||| |||| |||| || ||| |||||| ||||| ||||| | || ||||  ||||||||||||    
T  25461016 caataacaaattcaatcattgatttgagcgtaaacgctgcagaaccggaaacatggatattccggtggtttaagttttatcatatt 25460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 40556782 - 40556905
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||||| ||||||||||||| ||||| || ||| |||  |||||||||||||||||||| ||  ||||| ||||    
T  40556782 attcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggca--ttttgccgtt 40556879  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| |||  ||||||||| |||||    
T  40556880 gtatgctatgcacttgggtgttgtga 40556905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 233
Target Start/End: Complemental strand, 46304584 - 46304405
Alignment:
Q  52 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagca 151  Q
    |||||| |||||| | |||| |||| |||||||| |||  | ||| ||||| | | |||||| |||||||||  |||||||| ||| |||||||||||||    
T  46304584 tcttgtcgcggtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagca 46304485  T
Q  152 tgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||  | ||| |||| |||||||||||||| ||||| ||  | ||| ||||||||| |||||||||| ||| |||||    
T  46304484 tgggtatttcggtgacttaggttttatcatattatatgtaggca--tgttgccgttgtatgctattaacttgagtgttgtga 46304405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 4711583 - 4711685
Alignment:
Q  129 tcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtga 228  Q
    ||||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  ||||| ||||||||| ||||||||||||||     
T  4711583 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgt 4711680  T
Q  229 tgtga 233  Q
    |||||    
T  4711681 tgtga 4711685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 9173798 - 9173940
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    |||||||||| || ||||| ||||||| |||| ||  ||||||||||||  |||| |||| ||| ||||||| |||  |||| || | |||||||||| |    
T  9173798 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 9173897  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaactt 222  Q
    ||||||||||||||| ||  ||||| |||||||||||||||||||    
T  9173898 tcatattatttgtaggca--ttttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 12050656 - 12050543
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||| | |||||||||| |||||||||| |||| |||||  |  || |||| |||||||||||||||||||  ||||||  ||||||    
T  12050656 attcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcatttt--gtcgtt 12050559  T
Q  208 gtatgttattaacttg 223  Q
    ||||||||||||||||    
T  12050558 gtatgttattaacttg 12050543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 20608975 - 20608815
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||||| ||||||| |||||| | |||| |||| |||||||| |||| | | | ||| | | |  |||||||||||||||| || |||| |||| |    
T  20608975 tttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaacattagtcatttacaagttcaatcaatgatttgagcatcaaagttgca 20608876  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    |||||||||||||| | |||  | ||||||||||||||| |||||| ||| ||||||||||    
T  20608875 gatccggaagcatgagaatttcggtgatttagattttattatattacttgcagacattttt 20608815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 27856187 - 27856368
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag-atccggaag 149  Q
    |||||| ||||||||||||||||||| ||||||||||| | ||||| | ||| | | |||||||||||||| ||  |||   |  || || || ||||||    
T  27856187 gtcttgatgcggtgctcgtttggttcctattgaaagattaacttcagtaaataacaaattcaatcaatgatctggacgtattc--tgaagtattcggaag 27856284  T
Q  150 catgggtat--tctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| ||||  |||| ||||||||||||||||||||||||||||| |||||||   ||||| ||| ||||||||||| ||||||||    
T  27856285 catgagtatattctggtgatttagattttatcatattatttgtaggcattttt--ccgttgcatgctattaacttggatgatgtga 27856368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 3085304 - 3085192
Alignment:
Q  113 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatg 212  Q
    ||||||||||||  ||||||||||| |||| || ||| | |||||||||||||||||||| || |||||||||||||||| ||  ||||| ||||||| |    
T  3085304 atcaatgatttgaacgtcaacgttgcagattcgaaagtaggggtattctgatgatttagaattcatcatattatttgtaggca--ttttgccgttgtagg 3085207  T
Q  213 ttattaacttgggtg 227  Q
     |||||| |||||||    
T  3085206 ctattaaattgggtg 3085192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 38545785 - 38545996
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | ||||  ||   |||||||||||  | ||| ||||| | | |||    
T  38545785 tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaagatcgacatcagtcaattacaaatt 38545881  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    ||| |||||||||| |||||||||||| ||||||| || |||| | |||  | ||| |||| |||||||||||||||||||| ||  ||||| |||| ||    
T  38545882 caaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggca--ttttgccgtttta 38545979  T
Q  211 tgttattaacttgggtg 227  Q
    || ||||||||||||||    
T  38545980 tgctattaacttgggtg 38545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 7448922 - 7448799
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| | ||||||||||||| |||||  | ||| |||  ||| |||||||||||||||||||  ||||| || |    
T  7448922 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagaca--ttttgccgct 7448825  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||| ||||||||||    
T  7448824 gtatgctattaacttaggtgatgtga 7448799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 7457064 - 7456941
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| | ||||||||||||| |||||  | ||| |||  ||| |||||||||||||||||||  ||||| || |    
T  7457064 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagaca--ttttgccgct 7456967  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||||||| ||||||||||    
T  7456966 gtatgctattaacttaggtgatgtga 7456941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 21313116 - 21313239
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||||||||||||||  ||||||||| | | ||| | || |||| |||||  | ||| ||||||||||||||||||||||||| ||  ||||| ||||    
T  21313116 attcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtagcca--ttttgccgtt 21313213  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||||| |||||    
T  21313214 gtatgctattaacttgggtgctgtga 21313239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 48650810 - 48650619
Alignment:
Q  40 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 139  Q
    |||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| |||| |||||  ||||||||||| |    
T  48650810 tttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgcatcaatcaattacaaattcaaccaataatttggacgtcaacgttgca 48650711  T
Q  140 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||| | ||| ||| |||||  | ||| |||  |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||||    
T  48650710 gatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtaggca--ttttgccgttgtatgctattaacttgggtgttgtga 48650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 19619795 - 19619904
Alignment:
Q  109 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttg 208  Q
    |||||||||||||||  | |||||||||||||||||| ||||||| | |||  | ||| ||||||||||||||||||||||||| ||  ||||| |||||    
T  19619795 ttcaatcaatgatttaggtgtcaacgttgtagatccg-aagcatgagaatttcggtgacttagattttatcatattatttgtaggca--ttttgccgttg 19619891  T
Q  209 tatgttattaact 221  Q
    |||| ||||||||    
T  19619892 tatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 20465072 - 20464859
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 110  Q
    ||||||||||||||||| ||   |||  ||||||||||| ||||||| |||||| || |||   || ||||||||||||   |||| ||||| | | |||    
T  20465072 tgtgttgttcgtcgtcttgt---acggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttcagtcaattacaaatt 20464976  T
Q  111 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgta 210  Q
    |||| ||||||||| ||||||| |||| ||||  | ||||||| |||||  | ||| ||| |||||||||||||||||||   ||  ||||||||| |||    
T  20464975 caataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattatttgtgtgca--ttttgtcgtcgta 20464878  T
Q  211 tgttattaacttgggtgat 229  Q
    || |||||||||| |||||    
T  20464877 tgctattaacttgtgtgat 20464859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 38860122 - 38859997
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtat--tctgatgatttagattttatcatattatttgtagacattttttgtcg 205  Q
    |||||| |||||| |||  ||||||||||| ||||||| || |||||||||  | || ||| |||| |||||||||||||||||||| ||||||  | ||    
T  38860122 attcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgtaggcatttt--gccg 38860025  T
Q  206 ttgtatgttattaacttgggtgatgtga 233  Q
    ||||||| |||||||||||||| |||||    
T  38860024 ttgtatgctattaacttgggtgttgtga 38859997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 12149861 - 12149676
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||  | | | |||||| |||||||||| ||||||||||||     
T  12149861 gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgc 12149762  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||| ||||| |||||||||  | ||| |||  ||||||||||||| | |||| ||  ||||| ||||||||| |||||| ||||||    
T  12149761 agatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggca--ttttgccgttgtatgctattaagttgggt 12149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 35865042 - 35864895
Alignment:
Q  3 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 102  Q
    ||||||| ||||||||| ||||||| ||||| ||||   |||||||| ||||| | |||||| |||||| |||| ||||||||||||  | ||| |||||    
T  35865042 tgcggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatcaatcaat 35864946  T
Q  103 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 153  Q
     | | |||||||||||||||||  ||| ||| ||| ||||| |||||||||    
T  35864945 tacaaattcaatcaatgatttggacgttaacattgcagatctggaagcatg 35864895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 43016831 - 43017014
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||  ||| ||||| ||||   |||||||||||||||| |||||| | |||| |||| |  |||||||||  | | | |||    
T  43016831 agtgcggcgttgtgttgttcgttatcttgtgtggcgtt---tgattttgtgtcttgtcgcggtgtttgtttagttccttgtgaaagatcgacgttagtca 43016927  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 187  Q
    || | | |||||| |||||||||| |||||||||||| ||||||||| ||||| | |||  | ||| |||| | |||||||||||||    
T  43016928 attacaaattcaaccaatgatttgggcgtcaacgttgcagatccggatgcatgtgcatttcggtgacttaggtgttatcatattatt 43017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 47042086 - 47041937
Alignment:
Q  78 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 177  Q
    ||||||||||||| | ||| ||| | | | |||||| ||||| |||| |||||||||||| ||||||||||||||| | ||| || ||| |||| ||| |    
T  47042086 tattgaaagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttca 47041987  T
Q  178 tcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgat 229  Q
    ||||||||||||||| |   |||| ||||| |||| ||||||||| ||||||    
T  47041986 tcatattatttgtaggc--gttttatcgttttatgctattaacttaggtgat 47041937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10233046 - 10233273
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  10233046 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 10233142  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| |||||||||   ||  ||||||| |||||| ||| |||| |||||  | ||| |||  |||||||||||||||||||| ||  |||    
T  10233143 attacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaggca--ttt 10233240  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || ||||||||| |||||||||||||| |||||    
T  10233241 tgccgttgtatgctattaacttgggtgctgtga 10233273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 32246432 - 32246543
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 112  Q
    ||||||| ||||| | ||| ||||||||||||||  | ||||||||||| || ||  ||||||| ||||||||||||| ||||| | ||||| | |||||    
T  32246432 tgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatcacatattca 32246531  T
Q  113 atcaatgatttg 124  Q
    ||||||||||||    
T  32246532 atcaatgatttg 32246543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 22290925 - 22290998
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaa 84  Q
    ||||||||||  ||||| |||| | ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22290925 tgtgttgttcaccgtcttgtgtcatgttgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 51487217 - 51487266
Alignment:
Q  150 catgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  51487217 catgagtattctggtgatttagattttatcatattatttgtagacatttt 51487266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10108212 - 10108439
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | | |  |||| | ||||||||||  | ||| |||    
T  10108212 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaaagatctacatcagtca 10108308  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||  ||||||| |||||| || ||||| |||||  |  || |||  |||||||||||||||||||| ||||||     
T  10108309 attacaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaagttttatcatattatttgtaggcatttt- 10108407  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
     | ||||||||| |||||||||||||| |||||    
T  10108408 -gccgttgtatgctattaacttgggtgctgtga 10108439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 10229452 - 10229679
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||| ||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | ||||||||||  | ||| |||    
T  10229452 agtgcggcgttgtgttgttcgtcatcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtca 10229548  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||  ||||||| ||||||  |||||||  ||||  | ||| |||  |||||||||||||||||||| ||||||     
T  10229549 attacaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaagttttatcatattatttgtaggcatttt- 10229647  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
     | ||||||||| |||||||||||||| |||||    
T  10229648 -gccgttgtatgctattaacttgggtgctgtga 10229679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 47896175 - 47896354
Alignment:
Q  51 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 150  Q
    ||||||| |||||  | |||| |||| |||||||||||   | ||| ||||| | | |||||| |||||||||| |||| || |||| | ||||||||||    
T  47896175 gtcttgtcgcggtatttgtttagttcctattgaaagatttacatcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagc 47896274  T
Q  151 atgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||  ||||  ||| | |||| ||||||| |||||||||||| ||  ||||||||||||||| |||||||||| ||| |||||    
T  47896275 atgaatatttcgataacttaggttttatcttattatttgtag-ca--ttttgtcgttgtatgctattaacttgagtgttgtga 47896354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 31794072 - 31794150
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| | ||| | |||||||||||||| | ||||||||||||| || |||| ||| ||||||||||||    
T  31794072 tgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 44647602 - 44647724
Alignment:
Q  69 tttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatt 168  Q
    |||||||| |||| ||| |||| ||||| ||||| | | ||||| ||||||| ||  |||||||| ||  ||||||| | ||||| ||| |||||| |||    
T  44647602 tttggttcatattaaaatatcaacttcaatcaattaaaaattcactcaatgacttaggcgtcaacattacagatccgtatgcatgagtactctgatcatt 44647701  T
Q  169 tagattttatcatattatttgta 191  Q
    | |||||||||||||||||||||    
T  44647702 ttgattttatcatattatttgta 44647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 7792156 - 7792104
Alignment:
Q  147 aagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||    
T  7792156 aagcatgagtattctagtgatttagattttatcatattatttgtaggcatttt 7792104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 25631516 - 25631391
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcg 205  Q
    |||||||||| |||||| |||||||||||||||||||||| | ||||| ||||| | | | ||  |||||||||||| | ||||||| ||  || || ||    
T  25631516 attcaatcaaagatttgggcgtcaacgttgtagatccggatgccatggatattccggtcactttaattttatcatatatttttgtaggca--ttatgccg 25631419  T
Q  206 ttgtatgttattaacttgggtgatgtga 233  Q
    || |||||||||||||||| ||||||||    
T  25631418 ttatatgttattaacttggatgatgtga 25631391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 38142652 - 38142696
Alignment:
Q  155 gtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  38142652 gtattctgatgatttagatcttatcatattatttgtaggcatttt 38142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 12946944 - 12946852
Alignment:
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||| |||| ||| |||||||| |||||||||||| |||||||| ||||||| ||  ||||| | || |||| |||||||||||||| |||||    
T  12946944 agatccagaagtatgagtattctggtgatttagatttcatcatattttttgtaggca--ttttgcccttatatgctattaacttgggtgttgtga 12946852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 45425603 - 45425762
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | || |||| |||||| | |||| ||||  |||||||||||    ||| ||||| | | ||||||||||||||||| || ||||| |||     
T  45425603 gtttgatttcgcgtattgtcgcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaacattgc 45425702  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattt 198  Q
    |||||||||| |||  |||||  | ||| || ||||||||||||||||||| || |||||    
T  45425703 agatccggaaccataagtatttcggtgacttcgattttatcatattatttgcaggcattt 45425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 46178653 - 46178777
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat-tatttgtagacattttttgtcgt 206  Q
    |||||||||| || ||| |||||||||||| ||||||||| |||||||||||| | | | ||  |||||||||||| | ||||||  ||  || ||||||    
T  46178653 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattccggtcacttttattttatcatatatttttgtaagca--ttatgtcgt 46178750  T
Q  207 tgtatgttattaacttgggtgatgtga 233  Q
    | |||| ||||||||||| ||||||||    
T  46178751 tatatgctattaacttggatgatgtga 46178777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 52496932 - 52497003
Alignment:
Q  33 gacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 104  Q
    |||||||||||||||   || |||||| |||| ||||||| ||||||||||||||||| ||||| |||||||    
T  52496932 gacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatcagcttcaatcaatca 52497003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 20987703 - 20987640
Alignment:
Q  168 ttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||||||||||||||||||||||| ||  |||||  |||||||| ||||||||||| ||||||||    
T  20987703 ttagattttatcatattatttgtaggca--ttttgcagttgtatgctattaacttggatgatgtga 20987640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| || |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 46220768 - 46220834
Alignment:
Q  133 cgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||| ||||||| |||||| ||||||    ||||||||||||||||||||||||||||| ||||||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtaggcatttt 46220834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 7887501 - 7887424
Alignment:
Q  58 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 135  Q
    ||||||| |||||| |||| ||||||||||||| |||||  |||||| | |||| || ||||||||| ||||||||||    
T  7887501 tgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3606749 - 3606837
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||  ||||||||||||||||| ||||| |||||| |||| |   ||||||||| |||| |||||||||   ||||||||||||    
T  3606749 agtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttggtatctattgaaagatc 3606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 27066034 - 27066078
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcat 152  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||    
T  27066034 attcaatcaattatttgagcgtcaacattgtagatccggaagcat 27066078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 32246551 - 32246587
Alignment:
Q  156 tattctgatgatttagattttatcatattatttgtag 192  Q
    ||||||| |||||||||||||||||||||||||||||    
T  32246551 tattctggtgatttagattttatcatattatttgtag 32246587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 32607472 - 32607547
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 22803106 - 22803152
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 154  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  22803106 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 22803152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 31271817 - 31271768
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 157  Q
    |||||||||| |||||| ||||||||  || |||||||||||||||||||    
T  31271817 attcaatcaaagatttgggcgtcaacaatgcagatccggaagcatgggta 31271768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 18011052 - 18011184
Alignment:
Q  60 cggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 159  Q
    ||||| |||||| |||  ||||||||||||  ||| | ||||| | |  |||||||||| | ||| |||||||||||| |||||| ||||||||  ||||    
T  18011052 cggtgttcgtttagtttctattgaaagatcgactttagtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatt 18011151  T
Q  160 ctgatgatttagattttatcatattatttgtag 192  Q
        ||| |||||| | ||||||||||||||||    
T  18011152 tcagtgacttagatataatcatattatttgtag 18011184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 37040839 - 37040971
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    ||||| ||| || |||||||||||||| | || || ||||  ||||  ||| |||| |||||  | ||| |||||||| ||||||||| |||||| ||||    
T  37040839 tcaattataaatccaatcaatgatttgggtgtgaatgttgccgatctagaaacatgagtatttcggtgacttagatttaatcatattagttgtag-catt 37040937  T
Q  198 ttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||  ||| || ||||||||||||||||||| |||||    
T  37040938 tt--gtcattttatgttattaacttgggtgctgtga 37040971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 44959951 - 44959858
Alignment:
Q  138 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| ||||| ||||||||||  | ||| |||  |||||||||||||||||||| ||  ||||| | ||||||| ||||||||||| || |||||    
T  44959951 tagattcggaatcatgggtatttcggtgacttaagttttatcatattatttgtaggca--ttttgccattgtatgctattaacttggatgctgtga 44959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  13 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||| ||| |  ||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 58169 - 57973
Alignment:
Q  35 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 134  Q
    |||| |||||||||| |||||||||||||| | ||||| ||| || |||||||||| ||||| ||||||| |||||||||| ||||||||  |||||||     
T  58169 cgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaaca 58070  T
Q  135 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||| ||||||||||||||| |||||||| |||||||||||| |||||||| ||||||| ||  ||||| |||| |||| ||||||||||| || |||||    
T  58069 ttgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggca--ttttgccgttatatgctattaacttggatgctgtga 57973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 93080 - 93305
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgatttt-gtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 99  Q
    ||||| ||| ||||||||| || |||| ||| | ||||||||||| || ||||||||||| |||| ||||||||||| ||||||||||||   |||||||    
T  93080 agtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatcggtttcactc 93179  T
Q  100 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||| | ||| ||||||||||| |  ||||||||||| |||||| |||  |||||||||||| ||||||| ||||||||||||| ||||||| ||  ||    
T  93180 aatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatattgtttgtaggca--tt 93277  T
Q  200 ttgtcgttgtatgttattaacttgggtg 227  Q
    |||| ||||| || ||||||||||||||    
T  93278 ttgttgttgtgtgctattaacttgggtg 93305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 92589 - 92413
Alignment:
Q  23 cgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatt 122  Q
    ||||| ||| || ||||||||||||   ||||||||| |||| ||||||||||| |||||||||||||  || | | ||||| |||||||||||||||||    
T  92589 cgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatt 92490  T
Q  123 tgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||  |||||||||||||||||| ||||||||||||||||| |  |||| ||||||||||||| ||||||| ||||||    
T  92489 tggacgtcaacgttgtagatccagaagcatgggtattctggtagtttaaattttatcatattgtttgtaggcatttt 92413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 227
Target Start/End: Complemental strand, 71375 - 71191
Alignment:
Q  41 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 140  Q
    ||||||| | ||||||| | |||| |||||| |||| |||| |||||||  | ||| ||||| ||| ||||||||||||||| | | |||||||||| ||    
T  71375 ttgatttcgcgtcttgtcgtggtgttcgtttagttcctatttaaagatcggcatcagtcaattataaattcaatcaatgattggggtgtcaacgttgcag 71276  T
Q  141 atccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||  |||||| |||||||| ||||||||||||||    
T  71275 atccggaagcatgggtattttgatgacttagattttattatattatttgtaggca--ttttgttgttgtatgctattaacttgggtg 71191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 1728 - 1595
Alignment:
Q  66 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 165  Q
    ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |  ||||||| |||||||| ||| ||||||||||||| ||    
T  1728 tcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtg 1629  T
Q  166 atttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||||||||||||||| ||||||    
T  1628 atttagattttatcatattatttgtaggcatttt 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 1321 - 1548
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||||||||||| ||||| ||||   |||||| | |||||||||||||| |||||| |||| ||||||||||||  | ||| |||    
T  1321 agtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtca 1417  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||| | |||| ||||| |||||||||||| || ||  |||||||| | |||  | |||||||| |||||||||||||||||||| ||  |||    
T  1418 attacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggca--ttt 1515  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| ||||||||||| || |||||    
T  1516 tgccgttttatgctattaacttggatgttgtga 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 15468 - 15696
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||| | ||||||||||||||||| ||| | ||||  ||||||| | ||||||| |||||| | |||   ||| ||||||||||||  | ||| |||    
T  15468 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtca 15565  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||| ||| |||||||||||||||| ||||  | ||| |||| |||||||||||||||||||| ||  |||    
T  15566 attacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggca--ttt 15663  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    || |||| |||| |||||||||||||| |||||    
T  15664 tgccgttatatgctattaacttgggtgctgtga 15696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 32859 - 32632
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| |||||  | |||  |||| ||||||||||||  | ||| |||    
T  32859 agtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctacatcaatca 32763  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||  ||||||||||| ||||| ||||||||| |||||  | ||| ||||||||||||||||||||||||| ||  |||    
T  32762 attacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggca--ttt 32665  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||  |||||||||| ||| |||||    
T  32664 tgtcgctgtatactattaacttgagtgttgtga 32632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4141 - 4344
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttg-attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 99  Q
    ||||||||| ||||||| |||| ||||  |||| |||| |||  |||| || ||||||||||||| || ||| || | ||||||||||||| ||| | |     
T  4141 agtgcggcgttgtgttgctcgttgtctaatgtggcgttttttttatttcgtatcttgttgcggtgttcattttgtacatattgaaagatcaactttagtt 4240  T
Q  100 aatca----tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagaca 195  Q
    |||||    | |||||| |||||||  || | |||||||||| ||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||    
T  4241 aatcaattgttgattcactcaatgacatgagtgtcaacgttgcagatccgaaagcttgagtattttgatgatttagattttatcatattatttgtagaca 4340  T
Q  196 tttt 199  Q
    ||||    
T  4341 tttt 4344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 31317 - 31159
Alignment:
Q  73 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 172  Q
    |||| ||||||||||||  | ||||||||| | | |||||||||| |||||| || |||| |||| |||||||||||||||||||||  | ||| |||||    
T  31317 gttcctattgaaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttaga 31218  T
Q  173 ttttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||||||||||||| ||| ||  |||||||||||  || ||||| |||||||| |||||    
T  31217 ttttatcatattatttataggca--ttttgtcgttgcttgctattagcttgggtgctgtga 31159  T

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Target: scaffold0262 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 1827 - 1736
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatttt 199  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||||||||  ||||| ||| ||||||||||||||||||||| ||||||    
T  1827 attcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcatttt 1736  T

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Target: scaffold0050 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 66050 - 65937
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| |||||||||| | | |||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||| ||  ||||||||||    
T  66050 attcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggca--ttttgtcgtt 65953  T
Q  208 gtatgttattaacttg 223  Q
    ||||| ||||||||||    
T  65952 gtatgctattaacttg 65937  T

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Target: scaffold0088 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 50857 - 50980
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgtt 207  Q
    |||||| ||||||||||  ||||||||||| |||||||||||||||| ||||  | ||| |||  |||||||||||||||||||| ||  ||||| | ||    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggca--ttttgccatt 50954  T
Q  208 gtatgttattaacttgggtgatgtga 233  Q
    ||||| |||||||||||||| |||||    
T  50955 gtatgctattaacttgggtgctgtga 50980  T

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Target: scaffold0884 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 2050 - 1864
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| |  |||||| |||||| |  ||| |||| ||||||||||||  | | | ||||| | | |||||| ||||| |||| ||||||||||||     
T  2050 gtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatctacattagtcaattacaaattcaaccaatggtttgggcgtcaacgttgc 1951  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtg 227  Q
    ||||||| || |||  |||||  | |||||||| |||||||||||||||||||| ||  |||||  |||||||||||||||||||||||    
T  1950 agatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtaggca--ttttgctgttgtatgttattaacttgggtg 1864  T

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Target: scaffold0015 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 4058 - 3958
Alignment:
Q  98 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacatt 197  Q
    ||||||| |||||||| |||||||||   ||||||||||| | || ||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  4058 tcaatcacagattcaaccaatgatttagacgtcaacgttgcatatacggaaacatgg-tattctggtgatttaaattttatcatattatttgtagacatt 3960  T
Q  198 tt 199  Q
    ||    
T  3959 tt 3958  T

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Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 4134 - 4072
Alignment:
Q  34 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttca 96  Q
    |||||||||||||| ||||||| ||| |||| ||||||| ||| |||||||||| || |||||    
T  4134 acgttgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaagaccagcttca 4072  T

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Target: scaffold0634 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 8524 - 8709
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||  | | | |||||| |||||||||| ||||||||||||     
T  8524 gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgc 8623  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggt 226  Q
    ||||| ||||| |||||||||  | ||| |||  ||||||||||||| | |||| ||  ||||| ||||||||| |||||| ||||||    
T  8624 agatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggca--ttttgccgttgtatgctattaagttgggt 8709  T

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Target: scaffold0128 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 36906 - 36990
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    ||||||||||||||||| ||||||| ||||   ||| |||||||||||||||    |||||||||||||||||||||||||||||    
T  36906 attcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtag 36990  T

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Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 71976 - 71755
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| |||||||||||| |||| |||   ||  |||||||||   || |||| |||||| | |||  |||| ||||||||||||  | | | |||    
T  71976 agtgcggcgttgtgttgttcgttgtcttgtg---cggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctacattagtca 71880  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || | | |||||| ||||||||||   ||||||||||||||||||||||||||||| |      || |||  |||||||||||||||||||| ||||||     
T  71879 attacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggtgt------gacttaagttttatcatattatttgtaggcatttt- 71787  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
     | ||||||||| |||||||||||||| |||||    
T  71786 -gccgttgtatgctattaacttgggtgctgtga 71755  T

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Target: scaffold0603 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7693 - 7919
Alignment:
Q  1 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 100  Q
    ||||||||| ||||||||| ||||||| ||||| ||||   ||| || | |||||| ||| ||| ||||| | ||  ||||||||||||  ||||| |||    
T  7693 agtgcggcgttgtgttgtttgtcgtcttgtgtggcgtt---tgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtca 7789  T
Q  101 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttt 200  Q
    || ||| |||| |||||| ||||| | ||| |||||| | |||||||||||||| || | |  ||| ||| | |||||||||||||||||||  |  |||    
T  7790 attataaattccatcaattatttgggtgtcgacgttgcatatccggaagcatgg-taatgtagtgagttataatttatcatattatttgtaggga--ttt 7886  T
Q  201 tgtcgttgtatgttattaacttgggtgatgtga 233  Q
    ||   |||||||||||||||||||||| |||||    
T  7887 tgctattgtatgttattaacttgggtgttgtga 7919  T

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Target: scaffold0136 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 38076 - 38221
Alignment:
Q  50 tgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatc---cgg 146  Q
    ||||||||| | ||| |||||| |||| |||||||||||   ||||| ||||| | | |||||||| |||||||| | |||||| |||| ||||   |||    
T  38076 tgtcttgttacagtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttgggtgtcaacattgttgatccggcgg 38175  T
Q  147 aagcatgggtattctgatgatttagattttatcatattatttgtag 192  Q
    || ||||||||||  | ||| |||||||||||||||||||||||||    
T  38176 aaacatgggtatttcggtgacttagattttatcatattatttgtag 38221  T

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Target: scaffold0136; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 10119 - 9927
Alignment:
Q  39 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 138  Q
    ||||||||| | ||||||| |||||| || |||  ||| ||||||||||||  | ||  ||||| | | |||||| |||||||||| | ||||||||||     
T  10119 gtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgc 10020  T
Q  139 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtagacattttttgtcgttgtatgttattaacttgggtgatgtga 233  Q
    |||||| ||| |||| |||||    ||| || | |||||||||||||||||||| |||||||   |||| |||| |||| ||||||||| |||||    
T  10019 agatccagaaacatgtgtatttcagtgaattgggttttatcatattatttgtaggcattttt--ccgttttatgctattgacttgggtgctgtga 9927  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 25375 - 25456
Alignment:
Q  112 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattatttgtaga 193  Q
    ||||||||||||| |||||||| ||||||||||  || |||| ||| ||||| ||| |||||||| |||||||||||||||||    
T  25375 aatcaatgatttgagcgtcaacattgtagatccaaaaacatgagtatttctg-tgacttagatttgatcatattatttgtaga 25456  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 89  Q
    ||||||||||||||||| | | | ||||||||||||||  |||||||||||||| || ||||  || ||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 19122 - 19066
Alignment:
Q  68 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 124  Q
    ||||||||| ||||||||||| | ||||| ||||||| ||| |||||||||||||||    
T  19122 gtttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttg 19066  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 14878 - 14796
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 191  Q
    ||||||||||||||||  |  ||||| ||| |||||||||| |||| |||||  ||||| ||||| ||||||||||||||||||    
T  14878 attcaatcaatgatttaggaatcaacattgcagatccggaaacatgagtatttcgatgacttaga-tttatcatattatttgta 14796  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 36760 - 36683
Alignment:
Q  11 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 88  Q
    ||||||||||||||||| ||| |  ||||||||||||  | |||||||| |||| |  |||||||| |||||||||||    
T  36760 tgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 201363 - 201326
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccg 145  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  201363 attcaatcaaagatttgggcgtcaacgttgtagatccg 201326  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 8778 - 8854
Alignment:
Q  108 attcaatcaatgatttgtgcgtcaacgttgtagatccgga-agcatgggtattctgatgatttagattttatcatat 183  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||||| | | ||  ||||||||||||    
T  8778 attcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaattttatcatat 8854  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 9396 - 9484
Alignment:
Q  36 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 124  Q
    |||||||||||||  || || ||| |||| |||||||||| || ||||||||||| ||| | ||||| | | |||||||||| ||||||    
T  9396 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 9484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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